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Associated RNAi Experiments
InterPro
Analysis Name: InterProScan T. kingsejongensis
Date Performed: 2018-08-30
| IPR Term | IPR Description | Source | Source Term | Source Description | Alignment |
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| IPR009071 | High mobility group box domain | SMART | SM00398 | hmgende2 | coord: 50..120
e-value: 1.1E-25
score: 101.3 |
| IPR009071 | High mobility group box domain | PFAM | PF00505 | HMG_box | coord: 51..119
e-value: 3.9E-25
score: 87.9 |
| IPR009071 | High mobility group box domain | PROSITE | PS50118 | HMG_BOX_2 | coord: 51..119
score: 21.42 |
| IPR036910 | High mobility group box domain superfamily | GENE3D | 1.10.30.10 | | coord: 48..127
e-value: 4.6E-28
score: 99.5 |
| IPR036910 | High mobility group box domain superfamily | SUPERFAMILY | 47095 | HMG-box | coord: 36..123 |
| None | No IPR available | MOBIDB_LITE | mobidb-lite | disorder_prediction | coord: 217..262 |
| None | No IPR available | PANTHER | PTHR10270:SF288 | SUBFAMILY NOT NAMED | coord: 12..280 |
| None | No IPR available | PANTHER | PTHR10270 | SOX TRANSCRIPTION FACTOR | coord: 12..280 |
| None | No IPR available | CDD | cd01388 | SOX-TCF_HMG-box | coord: 50..120
e-value: 5.8034E-32
score: 114.318 |
Analyses
This polypeptide is derived from or has results from the following analyses
Relationships
This polypeptide derives from the following mRNA feature(s):
Sequences
The following sequences are available for this feature:
polypeptide sequence >Tk12389 ID=Tk12389|Name=Tk12389|organism=Tigriopus kingsejongensis|type=polypeptide|length=454bp
MISVLNPYRPMAQMKLCHRSSGTFGSLSVDQNSTTPYTDATQTKKQPVNR
IKRPMNAFMVFSHIERKKIIEFQPDIHNAEISKNLGKKWKLLSDEAKQPY
IQEAERLRLLHMKEYPDYKYQPRKKNGPGSKTNSPVHRSLVEKKSPVKRS
SPMKLNRSFGGNSWVNSSKVRFSTTNGPLTCVNHERLNLKFTIDSKFKAN
LAKSSAKLVPVSGFAVDTSKTSPTPSLPNVPTTPDLPHSPSESFYEDHHH
HHQYHPSQFHHHHSHMNASMMLHGVDAVKQNLDFNHFCDSTSISATTTSH
SYTPTTLNTNANQIKMEPISPMKTELKQEPISPHRYDCLYSNNQIKQESN
YFHEPLTPSSMSTDLSSVTSSLDDLDNIADLLPMHGGGDLSLDDISNLVD
IPKSFPEDQKPPECLMDMDFESPFAFTSPEDNDVFSSIDYHDSFVDNSLA
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Annotated Terms
The following terms have been associated with this polypeptide:
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