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Associated RNAi Experiments
Homology
BLAST of EMLSAG00000000014 vs. L. salmonis peptides
Match: EMLSAP00000000014 (pep:novel supercontig:LSalAtl2s:LSalAtl2s1004:40970:48940:1 gene:EMLSAG00000000014 transcript:EMLSAT00000000014 description:"snap_masked-LSalAtl2s1004-processed-gene-0.11") HSP 1 Score: 328.176 bits (840), Expect = 8.235e-116 Identity = 164/164 (100.00%), Postives = 164/164 (100.00%), Query Frame = 0
Query: 1 MDELESTNSGETNNGEEEEEEGEGEEEEDTGLTFSRELGDGESTSPNNTIQELPAAIQKKASKSTRNFSDRARRSRSEVRRQQQKTEPLDNRAWSKSPVKCRYRRPKNFLQTKPIPDLSERLSNSSSTSSFTQSLGELIPYIEGLLNRKLSGPNLCIKFNNQNN 164
MDELESTNSGETNNGEEEEEEGEGEEEEDTGLTFSRELGDGESTSPNNTIQELPAAIQKKASKSTRNFSDRARRSRSEVRRQQQKTEPLDNRAWSKSPVKCRYRRPKNFLQTKPIPDLSERLSNSSSTSSFTQSLGELIPYIEGLLNRKLSGPNLCIKFNNQNN
Sbjct: 1 MDELESTNSGETNNGEEEEEEGEGEEEEDTGLTFSRELGDGESTSPNNTIQELPAAIQKKASKSTRNFSDRARRSRSEVRRQQQKTEPLDNRAWSKSPVKCRYRRPKNFLQTKPIPDLSERLSNSSSTSSFTQSLGELIPYIEGLLNRKLSGPNLCIKFNNQNN 164
The following BLAST results are available for this feature:
BLAST of EMLSAG00000000014 vs. GO
Analysis Date: 2014-04-02 ( Blast vs. GO)
Total hits: 0
| Match Name | E-value | Identity | Description | |
|---|
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BLAST of EMLSAG00000000014 vs. L. salmonis peptides
Analysis Date: 2014-05-10 ( Blastp vs. self)
Total hits: 1
| Match Name | E-value | Identity | Description | |
|---|
| EMLSAP00000000014 | 8.235e-116 | 100.00 | pep:novel supercontig:LSalAtl2s:LSalAtl2s1004:4097... | [more] |
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Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| LSalAtl2s1004 | supercontig | LSalAtl2s1004:40970..48940 + |
Analyses
This gene is derived from or has results from the following analyses
Properties
| Property Name | Value |
|---|
| Logic name | ensemblgenomes |
| Description | snap_masked-LSalAtl2s1004-processed-gene-0.11 |
| Biotype | protein_coding |
| Evidence | IEA |
| Note | Hypothetical protein |
Cross References
External references for this gene
Relationships
The following mRNA feature(s) are a part of this gene:
Sequences
The following sequences are available for this feature:
gene from alignment at LSalAtl2s1004:40970..48940+ Legend: mRNA Hold the cursor over a type above to highlight its positions in the sequence below. >EMLSAG00000000014-682780 ID=EMLSAG00000000014-682780|Name=EMLSAG00000000014|organism=Lepeophtheirus salmonis|type=gene|length=7971bp|location=Sequence derived from alignment at LSalAtl2s1004:40970..48940+ (Lepeophtheirus salmonis)
GGTTCTTATATCCACTGACTTGTTAAGAATAATTAATACTTCATATTCAT
TACTGTGTTACTACCATTGCATTCTTCTTTTAGATTCGACAGCGTACTTT
TTGGAAGAAAAAACAAAACAAAAAACAACATATAGGTAAGATGATCAATA
ACTCCTTTACCAAATCAGCAAACATTTCCTAATATGACGTACCCAGCAAA
AAAAATAACCTTTTTCAGAAAATAATTTTTATTTCTACTGTTGAGTAACC
TTATTAAAAAATGTTTAATTAGTTTATTTAAATTTCTACAAAATTGCATA
CAATTTGGGGCCTGGAGCAAGTGTACCTCCTTAACAACAGCCCTAGTTAG
GACCAATTGTTAGTGGTATGAAAATTATGGAAATACACACGATGATAAAT
CAAAAAGAAAAGAATATGTTAGAAACTTTGATAGACAACAGTATGCTGAC
AGAGATCACTATCAATACTATAATATTTAGTAATGTAGATTGTGTGTATT
TTTTAGCTGGCCCGTTTTTTTGGAATTTGTATTCTGAAGAATTTTCTCTT
CATTCGCTGTTGTCAATATTATTTACCTCAAGAGTATTGAACTTCCTTTT
CTACGACATTCAGTTATATTCCAAATCTGATTAAACATTTGTGTGTGCAT
ATAAAAGGCAGATAGTAATCTTGAGTATTTGTTGTGGAGTTATAATTGTA
AGTCCCTGTTGGACTCTGATAGAATTGAGGATCGTCATCNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNTTGTGGAGTTATAATTGTAAGTCCCTGT
TGGACTCTGATAGAATTGAGGATCGTCATCGAAGTAATCATTGTTCCTTC
TTCAAGTTAATATAGTTACAATTTTTTTTTTAAATTTTTTTTTGAACATG
CCCAAAATTCACAAAATTTTCATCAGTAATTATATTTTTCCTTGCTCGCT
AGTATATATGTTCACAGTTTGGGAAAAATAATTATGAATATTAATACCTT
GCAGGTTACCAATACATACTTTTTTATACAAGGGTTTTATACGGGCGGTA
CATTGAAATCTGAGCACTGACTAATTCAAAAATGAATGAAGGTTGAGTTA
TTNATTAAAATTAATTCATATTTGATATATGTAACCATAAATAAGTAATT
ACAAAACAGAACAATCGTAAGCTGCTTAGTTTGCGTACAAGTTGAGATAA
TGTTACTTGAAAGTGATCGACGAATTTCCATTCGCACACTCCAAGAAGTT
AGGGGTCTCCAGTACCACCGTCTAAGCCACCAGGAAGTCCGAAACATTGG
AAAGGAAAATAGGTTCAATCAAAAAGGTAAAAATGGATCAGGAGAAGTAA
AAGAAAACAGCCCAGGCCAACTCCTCAAGTTCATGCCCATACGAGAGATC
TCGGGGTTTCACTGTTCAGAGAGCTATAAAAAAAGTGAGTAGAAAGAGCT
CTGTGAGAGTGAAGAGTCCACTTTGGACATCATCAATTAAAGAACCCCAT
CTCTTCTACTGCAAGACTCTTTTGAATAAGTCTTTTGAGTTCTATTGATG
ATATTTTATGACATTTTTGACCTCCCTACAGTCATTATGCCAACCACTTC
GACTACACCTTTTGGTTGCATGGTAATTTGCATGTTTAAATAAAAATTAA
TTAGAATATAATTTCATCCGGGGCCCTTACAGGTAGGATCCCCTAGTCTT
AAACCTAGGTTCGTGTATACTATGATCCTCACTTCTTTTAATTGGTTGAC
CAATTAAGATAATAAAATTAGAAATTTGTTTTTGCTTAATCATGTATGTA
AGGACTGGTATCGGTGGAATGGGAATTATTGAGCCGATTGCGCTACTTCA
AAAATGGTCAATTCTTGTCGTTTCCGATGCATCAGTACACCCCTAATATA
ATCATGAACCCAACTCCGTGTATAGCAAGAACATATAGGCTGGAATTACT
CCGATTTCGATACTCAACTATACTATGAGTCCAACAAGGATAAGCCTGGT
TGTTACTCACCGTCTTTTTTGACAACACGTACAAGTTATTACTTTATACT
TAAATGTTTCCTTCCAAGAGTTAAATAATAATGATAAAAGCTATCGAAAA
AAATAAATCCTGTTCACGCTGCAAATACAAACTGTATCTCCCACTTTCTA
AAATATATTTTAAAAAACTATTATGATTCTATATTCCTTAAATCCTATTC
ATTCTCCTTTTTTTAAACATACAAAAAATGTTAATGAAAGACGCTCTCAT
TGCGTATATATACATAGAGGAGTATGTGTTGTACTCATAAATAAGTGATA
ATGTTTTGTCTGTAGTAGTACTAGAGTTGTATAAAATATGTACTAGATAG
GGGGAGGGACTTTTTTGCAAGGCAATTTKAAANTGGGTTTTTAGATACAG
ATTATTGAAATGTGTTTCCTAAAAATTTAATATTTGAAATTTCATTATTA
AAATTTTTTTTTAAAGAATTTAATTGTCTGGGAATAGCTATGAATTTTTA
AAATGATTTTCTAAAGAATTTAATTTTCTGTGTAGAACTATGAATTTTTT
AAAATTTTTTTTGCAAAAAAATTAATTTTCTGTTAATACATATGAATTTT
TCGAAAATTAAAAAAAAAAAAAATCAAATGTTCTTCTAAGAAATTTAAWW
TTTTTTTTTCTTTTTTTGGATTTTGGATTTTTTTTTTTTCAAAAAAATTC
CAACAGCTAAGCCTCCAAATATAATCCTATGGACACCCCTCTATACAACA
TTCATAATCATTCCCATCACAGATAGAGTTCCGTGAGTAAAACAGGAGGC
AAAGACAAAATATTTTGATTTTTCTTTGTGTGGTTTCAATAATCTATACA
ATCATAAAAAAATACTTTAAATATTTAATATTTTTTTCTTCAAGCCCTAA
TTCATAAATAAAAATAAAAAGTTAAACATTAAAAGGAGTAAATCATTTTT
ATATTTGTTTATGTAATTCCTCTTAACATAATAGTAGGTTGGGGAAAAAG
TAATTTCGTATTTAAAATAAATTTATCTTGTTCATTATTGGTCACATTGG
ATCATACGATATAGCTTTGTGAAGGTTTGACTATATAGTACAAACACATC
TTGTACATTATTGTACTTGGACGGTTCAATCGAGAATTATCTTGCGTCGA
GTCTGGAGGTCTAAAATGAAGAAATTTGCCATATTTTACATTTCATTTAC
CAGAAAGGGAAACACGCCTTCCAAAGCGACCAAGAAAATTTGCAATATAT
ACGGGACCGATACTCTTTCGGTTAGTGAGTGGTTCGAGTGATTTTTTTCC
ACTCAATTTTGCCATCTACTGTGAACAACTTGMCCGTTTCAAGTTGGCAA
TCGAACAGMCSCAGCCACAATTGGCAAATAGGAGACAACAAGACATCATC
ATGACACACCCTGGCCGTAAACATCTTTGATGATCTAAGGAAATGTCATG
GCAGSTAAGCTGATCGCCTCCCAAAATATTCTGCCAATTGTTAGGATTAA
AACGTTCATTTTCGATATCTTTTATTTTTACATACCGTTAGGACATATTT
TATACATAATTAGGTAGTGCCATTATATTAATGTGTTAATTTGTAAAACT
TTGTTTAAAAATAGTAGATCCCACATAAAACTGGGGTCATGCAAGAAATG
TCAAAGGCTTTTCAAGGTTTGTCCATATTGCGAGTACTCAGAGGGGCGGC
CAAACTTTTTGTTCAATTAAGTATTAGTTATTTTTTCAAATTTTCAGAAG
GTCAATTTTATATTATATATAAGGCAGTAAAACACCAACAGGTAGATACT
GTTTAAGTTGGTTCCCTCTTTTTTGATGGAAAGTAAGTTATGTTGATGCT
TCATTCTTTTCGGTTCCTCAGTCAAAATTCACAGTTCAGGGTCCGGTTAA
TTTTGTAAGAACTGGTTTTTTTAAAAGTATTTATTATATGTAATATAATA
TACAGTAGTTTATTTAATAGCTTCATATTATCAGTTCTATTTTGTCGTAT
TTATTTTAATTGTCAGCGAAGAGTAGTTAAATCTATTAGGGATTTATGAT
CTGATACTGTTGTCATTGAATAAATTAATTTCTTTATAAATATCTAAATA
CTATTCATTGCATGGGATTTTTTGATACAAGGTATTGTATAAAACATATC
TTGCACGTATTCAATAATAAAAGATGCCGGGGAAAAACTTGGTAATCCAG
ACAACTTAAAGCACGTTTGGGAAGAGAGTAGCTTAGCTCTCATGACGTTT
TATTAGATCAGCTGTCTGCAACCCTAAGAGAAATGAAATACACACTAATC
CAACTGTTTATTTAGCAAGGACATATAGGAAATAATTAAGGGATGCCGAT
CCAAAATTCTACTCCGAGCCCAAATTACACTTACACTTATAACTCCAGAG
AAAATCCTCGTTGTAAGTCTTTGTCTTTTATGATCAGAAACACTAGTTAA
TACTTTATCCTTATATGTTCTGTCTTAAAGAATTAAATGACAAATATAAA
ACTCAGTTCAGATTCCCAACTACAAGAGGTTTCTCCTTCTTTCTGAGACA
TATTTTGTACACATCCTGATTTGTAAGTTGGGATATACTAGTTTTGCATT
TCAGTCTAGAACCCCTTCACTGATTCGAGACATTTATGGTTTTTAGATGA
TCATAACAATTCTTTCCTTGAAATAAATTCGGTTTGATCCGGTCTCGAAG
AAAAATTCGATTCCAATCGGTTTTACACAAAATCGGATTGATTCAATCTC
GTTTAGAATTCGGTCTAGACTGATGCTATATATGAATTGTCGATGAAGTC
AGTTGTGTATCATCGACCTTCAATGTCGTCATATGAAGTTAAATAATTCA
TATTTATAGAACTCATTCATCAGGAATGAGCAAAAAATCCTTCTAGGGTT
GGAGAACGATTAAATGTTGATCTAAGGTCTGAGATTGCAGTTTGTATCAA
AATATCAGTTCAGATGGGTATAAAAATATTTTAAGATTGAACCGGAAAAA
AGTTTGGTTTTGGACCAAGTCTCAACACTAGTTTTTTCTTAGAATAGTTA
GGTATGTACTTTGCATGATCCAAATTTATTGTTGGCGTGCTTCAAATAAA
AAGCAAAAAATTATTAATAACCAATTTGGAAGTCAATATCATATCATAAA
CGGATTTATTAATATTTGAAGTTTTTTAAAATCATTAATTGAAAAAAGAA
AGAGGAGGAATGGAAACAATAAGAAAAGTTTAAATGTTTTTTGTTGTTCT
TGATAAAATATATATGTATTAGTTATTACTCAACAAACAATTTAGAAAGC
ACTACACATTAAGGAAAATTTCTTAATGCAAAAAAAAAAAAGTAATAAAA
TATATAATTTAATCCTTAGATAATTATTATTGGGGCCATGAAAGTAAGGG
CCTGTACCACTTTAAACTACTTACGGGAAAATAAGCTATAATTAAGGTAG
GGAATTTTGTTCAGAAAAAGTTGAATTACAGGAAATAAAAAATGTTAATA
TCTCTTATGAATAAAAATTGTAGTATATTGTTCTTGCATTAGGTTTGGAT
CACAGTACCCTAATTGTAAAGGGGATTATTCTCAGTGATGCATACAAGGT
ATGTAAAAATAAAAGAAACCAAAAATGAAATCAGCTTAGATTTTATGACG
TTATAGTAGATCAATGGTTGTATTGTCTAAAACAAAAAGCTCAAGGAATG
AAATAGAGGAACAATAATTGTTGTTAAAAATGACTATGAAAATAGTAGCC
ATCAAGGCAGTTAGTTAGGCAACTTCGAGCCCACTAAATGAAATAAAATA
GTATGAAATAAGCGCTATTTGAAATAATGCACAAAAAAATTGTGTAATTT
TCAAACACATAAAATATTTCACAATTTTTTTAAAATATAAAAACTTTTAA
AGGTCTTTAATACAATTAAATGTACAATAAGTTAGTTTGAAAATCAATTC
ATTATTATTATTGTCAAAAAATGGTGATTCTTCCTAATTTGTACTCAATT
TATGCATTAAATTGAGATATAAGGCGTCGACTAACAGACTAACTTTGTTT
TATTACTATAGAAGATTTTTTTCACTTGATGTGAAGAGCCAATAAATATT
TTAGTCTTTAGAGAACTCACTGGTTGTGCTTTACTTAGGCCCATACGTTG
CTAAACCTAATCTAAAGTCATATTTATTATTTTTTAATGATGTACTTCCT
TTTTTTTTGAAATACGAACTCATTGTTGAAAATGAGTCTTCATCTGACAC
AAACAATCAAATGCTAGAATATAACTATAATACAATTGTACTTCAAATAT
AATTCATCAAATCATCAGTATAGATGACAGATGGTAAGATTGGGTATTTT
TTAGAGGTCAAGGAGCAAGTGAGAGCGAGACTGGACATATTACTTTTGAA
TTAATCAATTATAATTAATGCCCTTATTAAAAGTAACTACATTTTTGTAT
AATTATGGGGAAGAATGATAAGCCTTACTATATGCGTCTGTAAAGTACCA
GAGCGCTTATAAATTAGGTGCCTTTATCCGAAGATGGCAACTGGGGCCTT
TTAGCACTAGAAGGCGTTTTCACTAACTTCAACAAAATTTGCAATTCTAT
CCCTCATAAAGTTAGAAAACCATTAGTGCTTCTCAGGAAAACACTAGCAG
AGTCCGGATCACTTCACCATGTCGTGAGCGCTCTCTTTCCCATTTTTAGA
AACAATAAGTTTGCTTCCACTTATCCTTAAATTGAGCACAAATTATTAGT
GTTGCTGATTGGGAGCATTTTGGGCATCTGAATAATAAAGAAACCCAAAA
KCAATATGATAACCCGCACAAAATAAAGAATGTTTTGGAGGAGAACAGCT
TAGCTGTCATGACGCTTCATTACATCAGCTACATTCAGCTGAGAAGAGGG
AAGGGGAAGAAGGCAATCAACAAGGACATTGGTAAGAATTACTCCAATTT
CAATCCTCAATTCTACTCTGAGTCTAACAAAGACTTAAGATTGTAACTCT
ACTCAAATACTCAAGGCTACTCCCCACCTTTTATGAGCTGACATGCATGT
TCAATACGCTGTTGAATATAATTTAATGGAGCAGAAAATAGTTACATAAT
AATGACAACAGGTCATGAAAAGAAAATTGACTCTTAAGTTTGGAAACTCA
AAAACAAAACAAAAACGGGCGAGCTAAGAAATACACCCGATTTTTATCAT
GACTAAGTATGTTTTTCAATATTTGTTTAGAAAATACATTTTATATGTAA
GAAGCAATGTTTTTTCTCTCATCTTTAATAGTAAGCGCGCTCGCTCTTTT
GCACATGAATCTTAAGTACTGCTCACTAATGCTTCGAGAGTTAATAAAAC
TCTTCATAAAATAATAATAATTTAGATATAGTTTTAAACCTTTTAGTGAG
TTCTTCCAAAATGGACGAACTTGAGAGCACGAATAGTGGTGAAACTAACA
ATGGAGAGGAAGAGGAAGAAGAAGGAGAGGGAGAGGAAGAAGAAGACACT
GGACTTACATTCTCAAGGGAATTAGGAGATGGAGAATCAACTTCTCCAAA
TAATACGATTCAAGGTACTTTTTTTTACATCTTTTATCGTCCCACTAAAC
CATTATCAAATTCATCATTTCAATCCTCAGAGTTACCCGCTGCAATCCAA
AAAAAGGCATCCAAATCCACTAGAAATTTTTCAGATCGAGCTCGCCGAAG
CCGGAGTGAAGTTCGTAGACAACAGCAGAAAACAGAGCCATTAGACAATA
GGGCATGGTCAAAGTCTCCAGTTAAGTGTCGCTACAGAAGACCCAAGAAC
TTTTTGCAGACAAAGCCAATTCCAGATTTGAGTGAGAGATTATCCAATTC
TTCAAGTACGAGTTCCTTCACTCAAAGCTTAGGTGAGTTAATACCATATA
TAGAAGGGTTATTGAATCGCAAATTGAGTGGGCCTAATTTATGTATCAAG
TTTAATAATCAGAACAACTAG back to top
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