EMLSAG00000000563, EMLSAG00000000563-683329 (gene) Lepeophtheirus salmonis
Overview
Associated RNAi Experiments
Nothing found Homology
BLAST of EMLSAG00000000563 vs. C. finmarchicus
Match: gi|592843942|gb|GAXK01113602.1| (TSA: Calanus finmarchicus comp894031_c1_seq1 transcribed RNA sequence) HSP 1 Score: 30.4166 bits (67), Expect = 5.034e-1 Identity = 13/27 (48.15%), Postives = 16/27 (59.26%), Query Frame = 0 Query: 39 DSRRCVKCKRVHPLSLMLKNQLQPYSF 65 + RRC KCKRV LS+ +Q Y F Sbjct: 580 ERRRCTKCKRVCKLSIFGLRNIQSYLF 660
BLAST of EMLSAG00000000563 vs. C. finmarchicus
Match: gi|592834951|gb|GAXK01122593.1| (TSA: Calanus finmarchicus comp508465_c0_seq1 transcribed RNA sequence) HSP 1 Score: 30.4166 bits (67), Expect = 5.226e-1 Identity = 13/36 (36.11%), Postives = 23/36 (63.89%), Query Frame = 0 Query: 37 VSDSRRCVKCKRVHPLSLMLKNQLQPYSFNSKRKTP 72 V+D+R+C + KR L + N++QP+ +SK + P Sbjct: 2538 VADNRQCERFKRETSELLNIANEMQPFVCSSKCQAP 2645
BLAST of EMLSAG00000000563 vs. C. finmarchicus
Match: gi|592834950|gb|GAXK01122594.1| (TSA: Calanus finmarchicus comp508465_c0_seq2 transcribed RNA sequence) HSP 1 Score: 29.6462 bits (65), Expect = 7.348e-1 Identity = 13/36 (36.11%), Postives = 23/36 (63.89%), Query Frame = 0 Query: 37 VSDSRRCVKCKRVHPLSLMLKNQLQPYSFNSKRKTP 72 V+D+R+C + KR L + N++QP+ +SK + P Sbjct: 2538 VADNRQCERFKRETSELLNIANEMQPFVCSSKCQAP 2645
BLAST of EMLSAG00000000563 vs. C. finmarchicus
Match: gi|592783397|gb|GAXK01171171.1| (TSA: Calanus finmarchicus comp1364163_c0_seq1 transcribed RNA sequence) HSP 1 Score: 29.261 bits (64), Expect = 8.880e-1 Identity = 12/26 (46.15%), Postives = 18/26 (69.23%), Query Frame = 0 Query: 16 LGAPIEGNELMTIYLPEKYFWVSDSR 41 L AP+EG ++M + + +KY WV SR Sbjct: 240 LPAPLEGRQVMGMAMVDKYTWVLSSR 317
BLAST of EMLSAG00000000563 vs. C. finmarchicus
Match: gi|592947542|gb|GAXK01011011.1| (TSA: Calanus finmarchicus comp635301_c0_seq1 transcribed RNA sequence) HSP 1 Score: 27.7202 bits (60), Expect = 3.407e+0 Identity = 13/36 (36.11%), Postives = 18/36 (50.00%), Query Frame = 0 Query: 15 GLGAPIEGNELMTIYLPEKYFWVSDSRRCVKCKRVH 50 GL + NE +YLP K DSR+ K K+ + Sbjct: 58 GLNPDVSDNEETLVYLPTKKRKFDDSRKSPKSKKTN 165
BLAST of EMLSAG00000000563 vs. L. salmonis peptides
Match: EMLSAP00000000563 (pep:novel supercontig:LSalAtl2s:LSalAtl2s1093:275649:277380:1 gene:EMLSAG00000000563 transcript:EMLSAT00000000563 description:"maker-LSalAtl2s1093-snap-gene-1.17") HSP 1 Score: 155.606 bits (392), Expect = 1.230e-50 Identity = 74/74 (100.00%), Postives = 74/74 (100.00%), Query Frame = 0 Query: 1 MNSVPIESRRAYGLGLGAPIEGNELMTIYLPEKYFWVSDSRRCVKCKRVHPLSLMLKNQLQPYSFNSKRKTPSK 74 MNSVPIESRRAYGLGLGAPIEGNELMTIYLPEKYFWVSDSRRCVKCKRVHPLSLMLKNQLQPYSFNSKRKTPSK Sbjct: 1 MNSVPIESRRAYGLGLGAPIEGNELMTIYLPEKYFWVSDSRRCVKCKRVHPLSLMLKNQLQPYSFNSKRKTPSK 74 The following BLAST results are available for this feature:
BLAST of EMLSAG00000000563 vs. GO
Analysis Date: 2014-04-02 (Blast vs. GO) Total hits: 0
BLAST of EMLSAG00000000563 vs. C. finmarchicus
Analysis Date: 2014-05-09 (TblastN vs C. finmarchicus TSA) Total hits: 5
BLAST of EMLSAG00000000563 vs. L. salmonis peptides
Analysis Date: 2014-05-10 (Blastp vs. self) Total hits: 1
BLAST of EMLSAG00000000563 vs. SwissProt
Analysis Date: 2017-02-10 (Blastp vs. SwissProt) Total hits: 0
BLAST of EMLSAG00000000563 vs. Select Arthropod Genomes
Analysis Date: 2017-02-20 (Blastp vs. Selected Arthropods) Total hits: 0
BLAST of EMLSAG00000000563 vs. nr
Analysis Date: 2017-02-20 (Blastp vs. NR (2/2017)) Total hits: 0
BLAST of EMLSAG00000000563 vs. Tigriopus kingsejongenis genes
Analysis Date: 2018-04-18 (Blastp vs. Tigriopus kingsejongensis proteins) Total hits: 0
Alignments
The following features are aligned
Analyses
This gene is derived from or has results from the following analyses
Properties
Cross References
External references for this gene
Relationships
The following mRNA feature(s) are a part of this gene:
Sequences
The following sequences are available for this feature:
gene from alignment at LSalAtl2s1093:275649..277380+ Legend: mRNA Hold the cursor over a type above to highlight its positions in the sequence below.>EMLSAG00000000563-683329 ID=EMLSAG00000000563-683329|Name=EMLSAG00000000563|organism=Lepeophtheirus salmonis|type=gene|length=1732bp|location=Sequence derived from alignment at LSalAtl2s1093:275649..277380+ (Lepeophtheirus salmonis)back to top Add to Basket
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