EMLSAG00000006101, EMLSAG00000006101-688867 (gene) Lepeophtheirus salmonis
Overview
Associated RNAi Experiments
Nothing found Homology
BLAST of EMLSAG00000006101 vs. C. finmarchicus
Match: gi|592899475|gb|GAXK01058900.1| (TSA: Calanus finmarchicus comp127632_c2_seq1 transcribed RNA sequence) HSP 1 Score: 38.5058 bits (88), Expect = 6.297e-3 Identity = 31/96 (32.29%), Postives = 44/96 (45.83%), Query Frame = 0 Query: 66 CPRFCGACEGC---NNLVHNDICDKNIHRCNEYN------VRYLCAQTCGQCSKSCRNKLAADDVCNTFHKYGYCSRTSQYSTIMNEVCHGTCTSG 152 CP C AC+ C +N ++D C C+ N V+ C TC QCS C ++L + C ++ + GYC Y M C+ TCT G Sbjct: 1587 CPVTCSACKECTCEDNPAYDDRCPGWKRHCSSSNKNTRQFVQQRCPSTCNQCS-CCADRLDKNSYCESWKESGYCD-AGPYVAWMFNNCYKTCTCG 1868
BLAST of EMLSAG00000006101 vs. C. finmarchicus
Match: gi|592899473|gb|GAXK01058902.1| (TSA: Calanus finmarchicus comp127632_c2_seq3 transcribed RNA sequence) HSP 1 Score: 37.3502 bits (85), Expect = 1.175e-2 Identity = 30/94 (31.91%), Postives = 43/94 (45.74%), Query Frame = 0 Query: 66 CPRFCGACEGC---NNLVHNDICDKNIHRCNEYN------VRYLCAQTCGQCSKSCRNKLAADDVCNTFHKYGYCSRTSQYSTIMNEVCHGTCT 150 CP C AC+ C +N ++D C C+ N V+ C TC QCS C ++L + C ++ + GYC Y M C+ TCT Sbjct: 87 CPVTCSACKECTCEDNPAYDDRCPGWKRHCSSSNKNTRQFVQQRCPSTCNQCS-CCADRLDKNSYCESWKESGYCD-AGPYVAWMFNNCYKTCT 362
BLAST of EMLSAG00000006101 vs. L. salmonis peptides
Match: EMLSAP00000006101 (pep:novel supercontig:LSalAtl2s:LSalAtl2s3321:782:1958:1 gene:EMLSAG00000006101 transcript:EMLSAT00000006101 description:"maker-LSalAtl2s3321-augustus-gene-0.1") HSP 1 Score: 327.02 bits (837), Expect = 1.638e-115 Identity = 159/159 (100.00%), Postives = 159/159 (100.00%), Query Frame = 0 Query: 1 MKVIIQISILSALILGVFGGFENVWSPAYYFQCSQACGCTDSCLDPSADCLNESDICLKRDERRRCPRFCGACEGCNNLVHNDICDKNIHRCNEYNVRYLCAQTCGQCSKSCRNKLAADDVCNTFHKYGYCSRTSQYSTIMNEVCHGTCTSGCRNNINP 159 MKVIIQISILSALILGVFGGFENVWSPAYYFQCSQACGCTDSCLDPSADCLNESDICLKRDERRRCPRFCGACEGCNNLVHNDICDKNIHRCNEYNVRYLCAQTCGQCSKSCRNKLAADDVCNTFHKYGYCSRTSQYSTIMNEVCHGTCTSGCRNNINP Sbjct: 1 MKVIIQISILSALILGVFGGFENVWSPAYYFQCSQACGCTDSCLDPSADCLNESDICLKRDERRRCPRFCGACEGCNNLVHNDICDKNIHRCNEYNVRYLCAQTCGQCSKSCRNKLAADDVCNTFHKYGYCSRTSQYSTIMNEVCHGTCTSGCRNNINP 159
BLAST of EMLSAG00000006101 vs. L. salmonis peptides
Match: EMLSAP00000011280 (pep:novel supercontig:LSalAtl2s:LSalAtl2s772:397975:398789:-1 gene:EMLSAG00000011280 transcript:EMLSAT00000011280 description:"maker-LSalAtl2s772-augustus-gene-3.36") HSP 1 Score: 216.853 bits (551), Expect = 5.973e-72 Identity = 105/169 (62.13%), Postives = 128/169 (75.74%), Query Frame = 0 Query: 1 MKVIIQISILSALILGVFGGFENV---------------WSPAYYFQCSQACGCTDSCLDPSADCLNESDICLKRDERRRCPRFCGACEGCNNLVHNDICDKNIHRCNEYNVRYLCAQTCGQCSKSCRNKLAADDVCNTFHKYGYCSRTSQYSTIMNEVCHGTCTSGCR 154 MK IIQISILS LILGVFGGF+N+ P YYFQCS+ACGC CLDP+A+CL S ICL R CPR CG CEGCNNLVH+DIC+ N +RCN YNV+YLCA+TCG+CS++CRNK+A+DDVC+ FH++GYC R+S YS+IM +VC+GTC+SGCR Sbjct: 1 MKAIIQISILSTLILGVFGGFDNICKNTMTTCTRDEFRCMDPEYYFQCSKACGCKGPCLDPNAECLGNSLICLNDPNRNACPRSCGVCEGCNNLVHDDICEINAYRCNAYNVKYLCAKTCGKCSETCRNKMASDDVCDRFHRFGYCLRSSNYSSIMRDVCYGTCSSGCR 169
BLAST of EMLSAG00000006101 vs. L. salmonis peptides
Match: EMLSAP00000011279 (pep:novel supercontig:LSalAtl2s:LSalAtl2s772:382917:383509:-1 gene:EMLSAG00000011279 transcript:EMLSAT00000011279 description:"maker-LSalAtl2s772-augustus-gene-3.35") HSP 1 Score: 147.902 bits (372), Expect = 1.069e-45 Identity = 75/124 (60.48%), Postives = 86/124 (69.35%), Query Frame = 0 Query: 1 MKVIIQISILSALILGVFGGFENV---------------WSPAYYFQCSQACGCTDSCLDPSADCLNESDICLKRDERRRCPRFCGACEGCNNLVHNDICDKNIHRCNEYNVRYLCAQTCGQCS 109 MK IIQISILS LILGVFGGF+N+ P YYFQCS+ACGC CLDP+A+CL S ICL R CPR CG CEGCNNLVH+DIC+ N +RCN YNV+YLCA+TCG+ S Sbjct: 1 MKAIIQISILSTLILGVFGGFDNICKNTMPTCTRDEFRCMDPEYYFQCSKACGCKGPCLDPNAECLGNSLICLNDPNRNACPRSCGVCEGCNNLVHDDICEINAYRCNAYNVKYLCAETCGKFS 124
BLAST of EMLSAG00000006101 vs. L. salmonis peptides
Match: EMLSAP00000008527 (pep:novel supercontig:LSalAtl2s:LSalAtl2s5266:2605:5358:1 gene:EMLSAG00000008527 transcript:EMLSAT00000008527 description:"maker-LSalAtl2s5266-augustus-gene-0.1") HSP 1 Score: 131.724 bits (330), Expect = 4.649e-39 Identity = 75/153 (49.02%), Postives = 87/153 (56.86%), Query Frame = 0 Query: 1 MKVIIQISILSALILGVFGGFENV---------------WSPAYYFQCSQACGCTDSCLDPSADCLNESDICLKRDERRRCPRFCGACEGCNNLVHNDICDKNIHRCNEYNVRYLCAQTCGQCSKSCRNKLAADDVCNTFHKYGYCSRTSQYS 138 MK I QISI+SALILGVFGGFENV PAYYFQCS+ACGCT SCLDP+ CL+ S IC+ +DERRRCPRFCG CE +SCRNKLA+DD C+ F+++GYC TS YS Sbjct: 28 MKGIXQISIVSALILGVFGGFENVCKNTMPTCIRDEVRCLDPAYYFQCSKACGCTGSCLDPNXGCLDXSTICIXKDERRRCPRFCGVCE-----------------------------------ESCRNKLASDDACDRFNQFGYCFSTSPYS 145
BLAST of EMLSAG00000006101 vs. L. salmonis peptides
Match: EMLSAP00000002982 (pep:novel supercontig:LSalAtl2s:LSalAtl2s170:193433:195225:1 gene:EMLSAG00000002982 transcript:EMLSAT00000002982 description:"maker-LSalAtl2s170-augustus-gene-2.7") HSP 1 Score: 119.398 bits (298), Expect = 2.303e-34 Identity = 65/154 (42.21%), Postives = 91/154 (59.09%), Query Frame = 0 Query: 4 IIQIS---ILSALILGVFGGFENVWSPAYYFQCSQACGCTDSCLDPSADCLNESDICLKRDERRRCPRFCGACEGCNNLVHNDICDKNIHRCNEYNVRYLCAQTCGQCSKSCRNKLAADDVCNTFHKYGYCSRTSQYSTIMNEVCHGTCTSGCR 154 +IQ+S ILS + +G GGF+ +C D DC ++ +C++ +C R CG C GCN+LV IC N+HRCNEYNV YLC+ TCG+C + CRNK+ +D VC F+ GYC T+++S +M ++C TCTSGCR Sbjct: 1 MIQVSRLIILSCIFIGALGGFDX------------------TCADKRRDCKADNVLCMQPYYYFQCSRTCG-CTGCNDLVKQTICALNVHRCNEYNVLYLCSNTCGKCQERCRNKMGSDYVCAAFNARGYCYSTNKHSRVMRDICSATCTSGCR 135
BLAST of EMLSAG00000006101 vs. L. salmonis peptides
Match: EMLSAP00000004640 (pep:novel supercontig:LSalAtl2s:LSalAtl2s2425:15271:17023:1 gene:EMLSAG00000004640 transcript:EMLSAT00000004640 description:"maker-LSalAtl2s2425-augustus-gene-0.2") HSP 1 Score: 112.079 bits (279), Expect = 3.417e-31 Identity = 53/125 (42.40%), Postives = 74/125 (59.20%), Query Frame = 0 Query: 25 WSPAYYFQCSQACGCTDSCLDPSADCLNESDICLKRDERRRCPRFCGACEGCNNLVHNDICDKNIHRCNEYNVRYLCAQTCGQCSKSCRNKLAADDVCNTFHKYGYCSRTSQYSTIMNEVCHGTC 149 +P YYF+C ++CGC +C D S C+ + CL RD+R C R CG C+GC +L+ + +C++ + C+ NVRY C TC C K CR+ L + +CN F K GYC R S Y+ M C TC Sbjct: 39 MNPEYYFKCKKSCGCESACTDKSIKCIQNPNKCLDRDQRFECQRVCGNCDGCEDLLEHLMCNELKNLCHNENVRYFCPATCRLCEKGCRDNLPYNMMCNNFKKSGYCDRKSIYNRFMQSACQKTC 163
BLAST of EMLSAG00000006101 vs. L. salmonis peptides
Match: EMLSAP00000007109 (pep:novel supercontig:LSalAtl2s:LSalAtl2s400:180525:182688:-1 gene:EMLSAG00000007109 transcript:EMLSAT00000007109 description:"maker-LSalAtl2s400-augustus-gene-1.7") HSP 1 Score: 104.375 bits (259), Expect = 4.898e-28 Identity = 56/163 (34.36%), Postives = 84/163 (51.53%), Query Frame = 0 Query: 3 VIIQISILSALILGVFGGFENV----------------WSPAYYFQCSQACGCTDSCLDPSADCLNESDICLKRDERRRCPRFCGACEGCNNLVHNDICDKNIHRCNEYNVRYLCAQTCGQCSKSCRNKLAADDVCNTFHKYGYCSRTSQYSTIMNEVCHGTC 149 + I++ I+ + L V G N+ +P YYF+C + CGC C D S C+ + CL +++R C R CG C+ C +L++N +C++ + C+ NVRY C TC C K+CR+ L D VC +F K G+C S Y+ M C TC Sbjct: 25 MTIRLFIIISFFLVVVNGQGNIICRDEQKICKPDAYKCMNPEYYFKCKETCGCESRCTDKSIGCIQFPNRCLNQNQRVDCQRACGNCDRCEDLLNNLMCNELKNLCHNGNVRYFCPATCRLCEKACRDNLPYDIVCRSFRKSGFCDSNSIYNRFMQSACQKTC 187
BLAST of EMLSAG00000006101 vs. L. salmonis peptides
Match: EMLSAP00000012207 (pep:novel supercontig:LSalAtl2s:LSalAtl2s884:37024:45519:-1 gene:EMLSAG00000012207 transcript:EMLSAT00000012207 description:"maker-LSalAtl2s884-augustus-gene-1.11") HSP 1 Score: 101.679 bits (252), Expect = 1.651e-27 Identity = 52/126 (41.27%), Postives = 74/126 (58.73%), Query Frame = 0 Query: 26 SPAYYFQCSQACGCTDSCLDPSADCLNESDICLKRDERRRCPRFCGACEGCNNLVHNDICDKNIHRCNEYNVRYLCAQTCGQCSKSCRNKLAADDVCNTFHKYGYCSRTSQYSTIMNEVCHGTCTS 151 PAYYF+C + CGC +C D + C D CL + C RFCG C+GC NL+ +++C + + C+ NV+Y CA TC +C CRNK+A VCN F GYC +++S I+ ++C C S Sbjct: 20 KPAYYFKCRRTCGCKGNCQDGDSACFKIPDRCLSTNGN--CYRFCGLCDGCENLIKDELCKELRYLCHVENVKYFCAGTCNKCKYECRNKVAFTAVCNNFKAKGYCKMDNRHSYIIRKICAKACES 143
BLAST of EMLSAG00000006101 vs. L. salmonis peptides
Match: EMLSAP00000002978 (pep:novel supercontig:LSalAtl2s:LSalAtl2s170:166204:168625:1 gene:EMLSAG00000002978 transcript:EMLSAT00000002978 description:"maker-LSalAtl2s170-snap-gene-1.20") HSP 1 Score: 98.9821 bits (245), Expect = 2.624e-26 Identity = 59/172 (34.30%), Postives = 91/172 (52.91%), Query Frame = 0 Query: 5 IQISILSALILGVFGGFE------------------NVWSPAYYFQCSQACGCT--DSCLDPSADCLNESDICLKRDERRRCPRFCGACEGCNNLVHNDICDKNIHRCNEYNVRYLCAQTCGQCSKSCRNKLAADDVCNTFHKYGYCSRTSQYSTIMNEVCHGTCTSGCRNN 156 ++I + AL+LG ++ N P YY C ++CGC C D DC++ ++ C +ERR C+NL+ ++ C+ N + CN ++ YLCA+TCG+C CRNK+ ++ VCN F K YC +S + IM +VCH +CTSGCR++ Sbjct: 7 LRIVLFCALVLGTTSAYDHEDPYCLDKEDYCTADEWNCLHPQYYHVCRRSCGCKRRGQCYDLFGDCVDFTNDCF--NERR-----------CDNLIRDEYCENNRNLCNHPSILYLCARTCGRCRNDCRNKMLSNKVCNAFVKRRYCDTSSPFCWIMRDVCHASCTSGCRHH 165
BLAST of EMLSAG00000006101 vs. L. salmonis peptides
Match: EMLSAP00000005974 (pep:novel supercontig:LSalAtl2s:LSalAtl2s322:1175:2268:1 gene:EMLSAG00000005974 transcript:EMLSAT00000005974 description:"maker-LSalAtl2s322-augustus-gene-0.11") HSP 1 Score: 81.2629 bits (199), Expect = 5.962e-20 Identity = 45/129 (34.88%), Postives = 71/129 (55.04%), Query Frame = 0 Query: 23 NVWSPAYYFQCSQACG-CTDSCLDPSADCLNESDICLKRDERRRCPRFCGACEGCNNLVHNDICDKNIHRCNE-YNVRYLCAQTCGQCSKSCRNKLAADDVCNTFHKYGYCSRTSQYSTIMNEVCHGTC 149 +V+ + C + CG C SC D A CL S+ CL++ ++CP+ C +C+ C +L+++D+C HRC E +V+Y C +TCG C SC + + +C F GYC +++ MN C TC Sbjct: 2 HVYCLXXQWMCPEQCGVCQASCRDTGASCLEHSESCLQKSIEKQCPKSCASCDDCEDLINSDLCSGYKHRCGEDTSVQYACRKTCGLCDDSCNDASVHESLCYKFENNGYCEKSNTMD-FMNRACRRTC 129
BLAST of EMLSAG00000006101 vs. nr
Match: gi|290462093|gb|ADD24094.1| (protein ZK643.6 [Lepeophtheirus salmonis]) HSP 1 Score: 112.849 bits (281), Expect = 1.040e-28 Identity = 54/125 (43.20%), Postives = 75/125 (60.00%), Query Frame = 0 Query: 25 WSPAYYFQCSQACGCTDSCLDPSADCLNESDICLKRDERRRCPRFCGACEGCNNLVHNDICDKNIHRCNEYNVRYLCAQTCGQCSKSCRNKLAADDVCNTFHKYGYCSRTSQYSTIMNEVCHGTC 149 +P YYF+C ++CGC +C D S C+N + CL RD+R C R CG C+ C +L+ + +C++ + CN NVRY C TC C KSCR+ L + VC+ F K G+C R S Y+ M C TC Sbjct: 39 MNPEYYFKCKKSCGCESACTDTSIKCINNPNKCLDRDQRLECQRACGNCDRCEDLLEHIMCNQLKNLCNNGNVRYFCPATCRLCEKSCRDNLPYNRVCHNFKKSGFCDRKSIYNRFMKSACQKTC 163
BLAST of EMLSAG00000006101 vs. nr
Match: gi|225712722|gb|ACO12207.1| (ZK643.6 precursor [Lepeophtheirus salmonis]) HSP 1 Score: 62.7734 bits (151), Expect = 1.980e-9 Identity = 35/122 (28.69%), Postives = 62/122 (50.82%), Query Frame = 0 Query: 27 PAYYFQCSQACG-CTDSCLDPSADCLNESDIC-LKRDERRRCPRFCGACEGCNNLVHNDICDKNIHRCNEYNVRYLCAQTCGQCSKSCRNKLAADDVCNTFHKYGYCSRTSQYSTIMNEVCH 146 P+ + C + CG C C D +A+C NE C + ++ CP+ C C+ C +L+ + IC+ C E N++Y+C ++C C +C N +A+D++C + G C + + C Sbjct: 43 PSILYTCPETCGVCKAICKDYNANCFNEDSQCTINKNLSNTCPKTCATCDECEDLIDSSICENKKSDCAEDNMKYVCRKSCKYCEDTC-NDVASDELCKSHVSRGDCGNNEAVKRMCKKSCE 163 The following BLAST results are available for this feature:
BLAST of EMLSAG00000006101 vs. GO
Analysis Date: 2014-04-02 (Blast vs. GO) Total hits: 0
BLAST of EMLSAG00000006101 vs. C. finmarchicus
Analysis Date: 2014-05-09 (TblastN vs C. finmarchicus TSA) Total hits: 2
BLAST of EMLSAG00000006101 vs. L. salmonis peptides
Analysis Date: 2014-05-10 (Blastp vs. self) Total hits: 22
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BLAST of EMLSAG00000006101 vs. SwissProt
Analysis Date: 2017-02-10 (Blastp vs. SwissProt) Total hits: 0
BLAST of EMLSAG00000006101 vs. Select Arthropod Genomes
Analysis Date: 2017-02-20 (Blastp vs. Selected Arthropods) Total hits: 0
BLAST of EMLSAG00000006101 vs. nr
Analysis Date: 2017-02-20 (Blastp vs. NR (2/2017)) Total hits: 2
BLAST of EMLSAG00000006101 vs. Tigriopus kingsejongenis genes
Analysis Date: 2018-04-18 (Blastp vs. Tigriopus kingsejongensis proteins) Total hits: 0
Alignments
The following features are aligned
Analyses
This gene is derived from or has results from the following analyses
Properties
Cross References
External references for this gene
Relationships
The following mRNA feature(s) are a part of this gene:
Sequences
The following sequences are available for this feature:
gene from alignment at LSalAtl2s3321:782..1958+ Legend: mRNA Hold the cursor over a type above to highlight its positions in the sequence below.>EMLSAG00000006101-688867 ID=EMLSAG00000006101-688867|Name=EMLSAG00000006101|organism=Lepeophtheirus salmonis|type=gene|length=1177bp|location=Sequence derived from alignment at LSalAtl2s3321:782..1958+ (Lepeophtheirus salmonis)back to top Add to Basket
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