EMLSAG00000006139, EMLSAG00000006139-688905 (gene) Lepeophtheirus salmonis
Overview
Associated RNAi Experiments
Nothing found Homology
BLAST of EMLSAG00000006139 vs. C. finmarchicus
Match: gi|592932367|gb|GAXK01026186.1| (TSA: Calanus finmarchicus comp18158_c2_seq11 transcribed RNA sequence) HSP 1 Score: 87.0409 bits (214), Expect = 2.294e-19 Identity = 48/98 (48.98%), Postives = 61/98 (62.24%), Query Frame = 0 Query: 42 AVFFTIIACTI--AQKNDIKLKAASLQTNCGCQCNNYIFLDKYGKTQGNCNTVDKSGAKWCYV-SRGNTCNDVTYSSRKDERGQPRRISNEACATPVC 136 + F ++A T + D KAAS TNCGCQC+N F DKYG T GNC VD +GA+WCYV R +C D++Y+S + G+P S EACATP C Sbjct: 169 STFLILLAPTAESVKTTDTNTKAASPYTNCGCQCSNLTFKDKYGNTHGNCKRVDHTGAQWCYVDPRQGSCQDLSYTSTRFP-GKP--WSYEACATPAC 453
BLAST of EMLSAG00000006139 vs. C. finmarchicus
Match: gi|592932369|gb|GAXK01026184.1| (TSA: Calanus finmarchicus comp18158_c2_seq9 transcribed RNA sequence) HSP 1 Score: 87.0409 bits (214), Expect = 2.776e-19 Identity = 48/98 (48.98%), Postives = 61/98 (62.24%), Query Frame = 0 Query: 42 AVFFTIIACTI--AQKNDIKLKAASLQTNCGCQCNNYIFLDKYGKTQGNCNTVDKSGAKWCYV-SRGNTCNDVTYSSRKDERGQPRRISNEACATPVC 136 + F ++A T + D KAAS TNCGCQC+N F DKYG T GNC VD +GA+WCYV R +C D++Y+S + G+P S EACATP C Sbjct: 169 STFLILLAPTAESVKTTDTNTKAASPYTNCGCQCSNLTFKDKYGNTHGNCKRVDHTGAQWCYVDPRQGSCQDLSYTSTRFP-GKP--WSYEACATPAC 453
BLAST of EMLSAG00000006139 vs. C. finmarchicus
Match: gi|592956547|gb|GAXK01002009.1| (TSA: Calanus finmarchicus comp90527_c0_seq20 transcribed RNA sequence) HSP 1 Score: 86.6557 bits (213), Expect = 4.606e-19 Identity = 42/94 (44.68%), Postives = 61/94 (64.89%), Query Frame = 0 Query: 42 AVFFTIIACTIAQKNDIKLKAASLQTNCGCQCNNYIFLDKYGKTQGNCNTVDKSGAKWCYVSRGNTCNDVTYSSRKDERGQPRRI-SNEACATP 134 AVF I++ ++A + +KL+ A+ CGCQC++ ++ DKYG QGNC + D + AKWCYV G+TC+D+ S+R PR S +ACATP Sbjct: 156 AVFLMILSSSLAGRGSLKLRGAAAPA-CGCQCSSLVWQDKYGDVQGNCRSADHTKAKWCYVKEGSTCSDLVPSAR-----HPRNPWSYQACATP 419
BLAST of EMLSAG00000006139 vs. C. finmarchicus
Match: gi|592956545|gb|GAXK01002011.1| (TSA: Calanus finmarchicus comp90527_c0_seq22 transcribed RNA sequence) HSP 1 Score: 86.2705 bits (212), Expect = 4.723e-19 Identity = 42/94 (44.68%), Postives = 61/94 (64.89%), Query Frame = 0 Query: 42 AVFFTIIACTIAQKNDIKLKAASLQTNCGCQCNNYIFLDKYGKTQGNCNTVDKSGAKWCYVSRGNTCNDVTYSSRKDERGQPRRI-SNEACATP 134 AVF I++ ++A + +KL+ A+ CGCQC++ ++ DKYG QGNC + D + AKWCYV G+TC+D+ S+R PR S +ACATP Sbjct: 156 AVFLMILSSSLAGRGSLKLRGAAAPA-CGCQCSSLVWQDKYGDVQGNCRSADHTKAKWCYVKEGSTCSDLVPSAR-----HPRNPWSYQACATP 419
BLAST of EMLSAG00000006139 vs. C. finmarchicus
Match: gi|592956548|gb|GAXK01002008.1| (TSA: Calanus finmarchicus comp90527_c0_seq19 transcribed RNA sequence) HSP 1 Score: 86.6557 bits (213), Expect = 4.772e-19 Identity = 42/94 (44.68%), Postives = 61/94 (64.89%), Query Frame = 0 Query: 42 AVFFTIIACTIAQKNDIKLKAASLQTNCGCQCNNYIFLDKYGKTQGNCNTVDKSGAKWCYVSRGNTCNDVTYSSRKDERGQPRRI-SNEACATP 134 AVF I++ ++A + +KL+ A+ CGCQC++ ++ DKYG QGNC + D + AKWCYV G+TC+D+ S+R PR S +ACATP Sbjct: 156 AVFLMILSSSLAGRGSLKLRGAAAPA-CGCQCSSLVWQDKYGDVQGNCRSADHTKAKWCYVKEGSTCSDLVPSAR-----HPRNPWSYQACATP 419
BLAST of EMLSAG00000006139 vs. C. finmarchicus
Match: gi|592956546|gb|GAXK01002010.1| (TSA: Calanus finmarchicus comp90527_c0_seq21 transcribed RNA sequence) HSP 1 Score: 86.2705 bits (212), Expect = 5.350e-19 Identity = 42/94 (44.68%), Postives = 61/94 (64.89%), Query Frame = 0 Query: 42 AVFFTIIACTIAQKNDIKLKAASLQTNCGCQCNNYIFLDKYGKTQGNCNTVDKSGAKWCYVSRGNTCNDVTYSSRKDERGQPRRI-SNEACATP 134 AVF I++ ++A + +KL+ A+ CGCQC++ ++ DKYG QGNC + D + AKWCYV G+TC+D+ S+R PR S +ACATP Sbjct: 156 AVFLMILSSSLAGRGSLKLRGAAAPA-CGCQCSSLVWQDKYGDVQGNCRSADHTKAKWCYVKEGSTCSDLVPSAR-----HPRNPWSYQACATP 419
BLAST of EMLSAG00000006139 vs. C. finmarchicus
Match: gi|592956551|gb|GAXK01002005.1| (TSA: Calanus finmarchicus comp90527_c0_seq16 transcribed RNA sequence) HSP 1 Score: 86.6557 bits (213), Expect = 2.395e-18 Identity = 42/94 (44.68%), Postives = 61/94 (64.89%), Query Frame = 0 Query: 42 AVFFTIIACTIAQKNDIKLKAASLQTNCGCQCNNYIFLDKYGKTQGNCNTVDKSGAKWCYVSRGNTCNDVTYSSRKDERGQPRRI-SNEACATP 134 AVF I++ ++A + +KL+ A+ CGCQC++ ++ DKYG QGNC + D + AKWCYV G+TC+D+ S+R PR S +ACATP Sbjct: 156 AVFLMILSSSLAGRGSLKLRGAAAPA-CGCQCSSLVWQDKYGDVQGNCRSADHTKAKWCYVKEGSTCSDLVPSAR-----HPRNPWSYQACATP 419
BLAST of EMLSAG00000006139 vs. C. finmarchicus
Match: gi|592956550|gb|GAXK01002006.1| (TSA: Calanus finmarchicus comp90527_c0_seq17 transcribed RNA sequence) HSP 1 Score: 86.2705 bits (212), Expect = 2.867e-18 Identity = 42/94 (44.68%), Postives = 61/94 (64.89%), Query Frame = 0 Query: 42 AVFFTIIACTIAQKNDIKLKAASLQTNCGCQCNNYIFLDKYGKTQGNCNTVDKSGAKWCYVSRGNTCNDVTYSSRKDERGQPRRI-SNEACATP 134 AVF I++ ++A + +KL+ A+ CGCQC++ ++ DKYG QGNC + D + AKWCYV G+TC+D+ S+R PR S +ACATP Sbjct: 156 AVFLMILSSSLAGRGSLKLRGAAAPA-CGCQCSSLVWQDKYGDVQGNCRSADHTKAKWCYVKEGSTCSDLVPSAR-----HPRNPWSYQACATP 419
BLAST of EMLSAG00000006139 vs. C. finmarchicus
Match: gi|592956558|gb|GAXK01001998.1| (TSA: Calanus finmarchicus comp90527_c0_seq9 transcribed RNA sequence) HSP 1 Score: 86.6557 bits (213), Expect = 2.906e-18 Identity = 42/94 (44.68%), Postives = 61/94 (64.89%), Query Frame = 0 Query: 42 AVFFTIIACTIAQKNDIKLKAASLQTNCGCQCNNYIFLDKYGKTQGNCNTVDKSGAKWCYVSRGNTCNDVTYSSRKDERGQPRRI-SNEACATP 134 AVF I++ ++A + +KL+ A+ CGCQC++ ++ DKYG QGNC + D + AKWCYV G+TC+D+ S+R PR S +ACATP Sbjct: 156 AVFLMILSSSLAGRGSLKLRGAAAPA-CGCQCSSLVWQDKYGDVQGNCRSADHTKAKWCYVKEGSTCSDLVPSAR-----HPRNPWSYQACATP 419
BLAST of EMLSAG00000006139 vs. C. finmarchicus
Match: gi|592956560|gb|GAXK01001996.1| (TSA: Calanus finmarchicus comp90527_c0_seq7 transcribed RNA sequence) HSP 1 Score: 86.6557 bits (213), Expect = 2.953e-18 Identity = 42/94 (44.68%), Postives = 61/94 (64.89%), Query Frame = 0 Query: 42 AVFFTIIACTIAQKNDIKLKAASLQTNCGCQCNNYIFLDKYGKTQGNCNTVDKSGAKWCYVSRGNTCNDVTYSSRKDERGQPRRI-SNEACATP 134 AVF I++ ++A + +KL+ A+ CGCQC++ ++ DKYG QGNC + D + AKWCYV G+TC+D+ S+R PR S +ACATP Sbjct: 156 AVFLMILSSSLAGRGSLKLRGAAAPA-CGCQCSSLVWQDKYGDVQGNCRSADHTKAKWCYVKEGSTCSDLVPSAR-----HPRNPWSYQACATP 419
BLAST of EMLSAG00000006139 vs. L. salmonis peptides
Match: EMLSAP00000006139 (pep:novel supercontig:LSalAtl2s:LSalAtl2s335:347119:354560:1 gene:EMLSAG00000006139 transcript:EMLSAT00000006139 description:"snap_masked-LSalAtl2s335-processed-gene-4.8") HSP 1 Score: 553.518 bits (1425), Expect = 0.000e+0 Identity = 288/288 (100.00%), Postives = 288/288 (100.00%), Query Frame = 0 Query: 1 MQVVVIDVESSCWNLAFIISESSDDSSISDPPSLSEVATFKAVFFTIIACTIAQKNDIKLKAASLQTNCGCQCNNYIFLDKYGKTQGNCNTVDKSGAKWCYVSRGNTCNDVTYSSRKDERGQPRRISNEACATPVCNGRFTGGGQGGPFGGSSGGSGSFGGGHGGSSSFGGSNGGSGSFGEGQVGSGSFEGSSGGSGLFGGGHGGSNSGSGLFGGSGSLGESGSYHGSSGPGNGGSFGGNVPSFGSSSSGKGLLFGGSESTNSGSSGTGTGSYISIANILKPRSSIQY 288 MQVVVIDVESSCWNLAFIISESSDDSSISDPPSLSEVATFKAVFFTIIACTIAQKNDIKLKAASLQTNCGCQCNNYIFLDKYGKTQGNCNTVDKSGAKWCYVSRGNTCNDVTYSSRKDERGQPRRISNEACATPVCNGRFTGGGQGGPFGGSSGGSGSFGGGHGGSSSFGGSNGGSGSFGEGQVGSGSFEGSSGGSGLFGGGHGGSNSGSGLFGGSGSLGESGSYHGSSGPGNGGSFGGNVPSFGSSSSGKGLLFGGSESTNSGSSGTGTGSYISIANILKPRSSIQY Sbjct: 1 MQVVVIDVESSCWNLAFIISESSDDSSISDPPSLSEVATFKAVFFTIIACTIAQKNDIKLKAASLQTNCGCQCNNYIFLDKYGKTQGNCNTVDKSGAKWCYVSRGNTCNDVTYSSRKDERGQPRRISNEACATPVCNGRFTGGGQGGPFGGSSGGSGSFGGGHGGSSSFGGSNGGSGSFGEGQVGSGSFEGSSGGSGLFGGGHGGSNSGSGLFGGSGSLGESGSYHGSSGPGNGGSFGGNVPSFGSSSSGKGLLFGGSESTNSGSSGTGTGSYISIANILKPRSSIQY 288
BLAST of EMLSAG00000006139 vs. L. salmonis peptides
Match: EMLSAP00000006141 (pep:novel supercontig:LSalAtl2s:LSalAtl2s335:388935:390297:1 gene:EMLSAG00000006141 transcript:EMLSAT00000006141 description:"maker-LSalAtl2s335-snap-gene-4.14") HSP 1 Score: 192.586 bits (488), Expect = 2.429e-60 Identity = 86/99 (86.87%), Postives = 90/99 (90.91%), Query Frame = 0 Query: 43 VFFTIIACTIAQKNDIKLKAASLQTNCGCQCNNYIFLDKYGKTQGNCNTVDKSGAKWCYVSRGNTCNDVTYSSRKDERGQPRRISNEACATPVCNGRFT 141 + + AC IAQKNDI LKAAS +TNCGCQCNNYIF DKYG+TQGNCNT DKSGAKWCYVSRGNTCNDVTYSSRKDERGQPRRISNEACATPVCNGRFT Sbjct: 7 ILLVVCACAIAQKNDIILKAASSRTNCGCQCNNYIFKDKYGRTQGNCNTADKSGAKWCYVSRGNTCNDVTYSSRKDERGQPRRISNEACATPVCNGRFT 105
BLAST of EMLSAG00000006139 vs. L. salmonis peptides
Match: EMLSAP00000006138 (pep:novel supercontig:LSalAtl2s:LSalAtl2s335:340556:341608:-1 gene:EMLSAG00000006138 transcript:EMLSAT00000006138 description:"maker-LSalAtl2s335-snap-gene-3.5") HSP 1 Score: 141.354 bits (355), Expect = 7.111e-41 Identity = 66/99 (66.67%), Postives = 75/99 (75.76%), Query Frame = 0 Query: 43 VFFTIIACTIAQKNDIKLKAASLQTNCGCQCNNYIFLDKYGKTQGNCNTVDKSGAKWCYVSRGNTCNDVTYSSRKDERGQPRRISNEACATPVCNGRFT 141 + F + C IAQ DI LKAASL++NCGCQCN + T+ VDK+GAKWCYVSRGNTCNDVTYS R+DERGQPR+ISNEACATP CNGRFT Sbjct: 8 LLFCFLFCAIAQNKDITLKAASLKSNCGCQCNXL-----WEDTRK---LVDKTGAKWCYVSRGNTCNDVTYSKRRDERGQPRQISNEACATPTCNGRFT 98
BLAST of EMLSAG00000006139 vs. L. salmonis peptides
Match: EMLSAP00000007123 (pep:novel supercontig:LSalAtl2s:LSalAtl2s401:84241:84844:-1 gene:EMLSAG00000007123 transcript:EMLSAT00000007123 description:"maker-LSalAtl2s401-augustus-gene-0.14") HSP 1 Score: 116.701 bits (291), Expect = 1.456e-31 Identity = 56/94 (59.57%), Postives = 66/94 (70.21%), Query Frame = 0 Query: 45 FTIIACTIAQK--NDIKLKAASLQTNCGCQCNNYIFLDKYGKTQGNCNTVDKSGAKWCYVSRGNTCNDVTYSSRKDERGQPRRISNEACATPVC 136 F II+ +A DI LKA SL NCGCQC+NYIF D G TQGNCN+ D++GAKWCYV RG+TC D S R D+ G+ R+IS EACATP C Sbjct: 5 FLIISVVVALTSAQDITLKAPSLAVNCGCQCSNYIFRDLRGITQGNCNSADRTGAKWCYVDRGHTCQDTRGSGRNDQFGRRRQISYEACATPRC 98
BLAST of EMLSAG00000006139 vs. L. salmonis peptides
Match: EMLSAP00000007122 (pep:novel supercontig:LSalAtl2s:LSalAtl2s401:64891:74089:-1 gene:EMLSAG00000007122 transcript:EMLSAT00000007122 description:"maker-LSalAtl2s401-augustus-gene-0.13") HSP 1 Score: 115.546 bits (288), Expect = 8.198e-31 Identity = 57/94 (60.64%), Postives = 68/94 (72.34%), Query Frame = 0 Query: 43 VFFTIIACTIAQKNDIKLKAASLQTNCGCQCNNYIFLDKYGKTQGNCNTVDKSGAKWCYVSRGNTCNDVTYSSRKDERGQPRRISNEACATPVC 136 + ++A T AQ DI LKA SL NCGCQC+NYIF D G TQGNCN+ D++GAKWCYV RG+TC D S RKD+ G+ R+IS EACATP C Sbjct: 105 IISVVVALTSAQ--DITLKAPSLAVNCGCQCSNYIFRDLRGITQGNCNSADRTGAKWCYVDRGHTCQDTRGSGRKDQFGRRRQISYEACATPRC 196 HSP 2 Score: 102.449 bits (254), Expect = 4.852e-26 Identity = 51/88 (57.95%), Postives = 63/88 (71.59%), Query Frame = 0 Query: 43 VFFTIIACTIAQKNDIKLKAASLQTNCGCQCNNYIFLDKYGKTQGNCNTVDKSGAKWCYVSRGNTCNDVTYSSRKDERGQPRRISNEA 130 + ++A T AQ DI LKA SL NCGCQC+NYIF D G TQGNCN+ D++GAKWCYV RG+TC D S R+D+ G+ R+IS EA Sbjct: 7 IISVVVALTSAQ--DITLKAPSLAVNCGCQCSNYIFRDLRGITQGNCNSADQTGAKWCYVDRGHTCQDTRGSGRRDQFGRRRQISYEA 92
BLAST of EMLSAG00000006139 vs. L. salmonis peptides
Match: EMLSAP00000001015 (pep:novel supercontig:LSalAtl2s:LSalAtl2s116:786764:792986:-1 gene:EMLSAG00000001015 transcript:EMLSAT00000001015 description:"maker-LSalAtl2s116-augustus-gene-8.13") HSP 1 Score: 114.39 bits (285), Expect = 4.145e-30 Identity = 52/80 (65.00%), Postives = 60/80 (75.00%), Query Frame = 0 Query: 57 DIKLKAASLQTNCGCQCNNYIFLDKYGKTQGNCNTVDKSGAKWCYVSRGNTCNDVTYSSRKDERGQPRRISNEACATPVC 136 DI LKA SL NCGCQC+NYIF D G TQGNCN+ D++GAKWCYV RG+TC D S R+D G+ R+IS EACATP C Sbjct: 19 DITLKAPSLAVNCGCQCSNYIFRDGNGITQGNCNSADRTGAKWCYVERGHTCQDTRRSXRRDNFGRLRQISYEACATPRC 98 HSP 2 Score: 54.299 bits (129), Expect = 5.587e-9 Identity = 28/59 (47.46%), Postives = 32/59 (54.24%), Query Frame = 0 Query: 33 SLSEVATFKAVFFTIIACTIAQKNDIKLKAASLQTNCGCQCNNYIFLDKYGKTQGNCNT 91 SL + + I DI LKA SL NCGCQC+NYIF D G TQGNCN+ Sbjct: 166 SLHTLNMISKILILSIFVVFGSAQDITLKAPSLAVNCGCQCSNYIFRDGNGITQGNCNS 224
BLAST of EMLSAG00000006139 vs. L. salmonis peptides
Match: EMLSAP00000007117 (pep:novel supercontig:LSalAtl2s:LSalAtl2s401:30551:49956:-1 gene:EMLSAG00000007117 transcript:EMLSAT00000007117 description:"maker-LSalAtl2s401-augustus-gene-0.12") HSP 1 Score: 114.005 bits (284), Expect = 7.001e-30 Identity = 56/95 (58.95%), Postives = 69/95 (72.63%), Query Frame = 0 Query: 43 VFFTIIACTIAQKNDIKLKAASLQTNCGCQCNNYIFLDKYGKTQGNCNTVDKSGAKWCYVSRGNTCNDVTYSSRKDERGQPRRISNEACATPVCN 137 + ++A T AQ DI LKA SL NCGCQC+NYIF D G TQGNCN+ D++GAKWCYV RG+TC D S+R D+ G+ R+IS EACATP C+ Sbjct: 62 IISVVVALTSAQ--DITLKAPSLAVNCGCQCSNYIFRDLRGITQGNCNSADQTGAKWCYVDRGHTCQDTIGSARNDQFGRRRQISYEACATPNCD 154 HSP 2 Score: 98.5969 bits (244), Expect = 2.590e-24 Identity = 50/82 (60.98%), Postives = 58/82 (70.73%), Query Frame = 0 Query: 57 DIKLKAASLQTNCGCQCNNYIFLDKYGKTQGNCNTVDKSGAKWCYVSRGNTCNDVTYSSRKDERGQPRRISNEACATPVCNG 138 DI LKA SL NCGCQC+ YIF D G TQGNCN+ D++GAKWCYV+RG TC S R + G+ R+IS EACATP C G Sbjct: 154 DITLKAPSLAVNCGCQCSIYIFQDVRGITQGNCNSADQTGAKWCYVNRGYTCQYTRGSGRNYQFGRRRQISYEACATPRCGG 235 HSP 3 Score: 57.7658 bits (138), Expect = 4.625e-10 Identity = 27/51 (52.94%), Postives = 34/51 (66.67%), Query Frame = 0 Query: 41 KAVFFTIIACTIAQKNDIKLKAASLQTNCGCQCNNYIFLDKYGKTQGNCNT 91 K + +++ +A DI LKA SL NCGCQC+NYIF D G TQGNCN+ Sbjct: 4 KILIISVVV-VLASAQDITLKAPSLAVNCGCQCSNYIFQDVRGITQGNCNS 53
BLAST of EMLSAG00000006139 vs. L. salmonis peptides
Match: EMLSAP00000006140 (pep:novel supercontig:LSalAtl2s:LSalAtl2s335:379177:380528:1 gene:EMLSAG00000006140 transcript:EMLSAT00000006140 description:"maker-LSalAtl2s335-snap-gene-4.15") HSP 1 Score: 109.768 bits (273), Expect = 9.276e-30 Identity = 50/60 (83.33%), Postives = 53/60 (88.33%), Query Frame = 0 Query: 89 CNTV---DKSGAKWCYVSRGNTCNDVTYSSRKDERGQPRRISNEACATPVCNGRFTGGGQ 145 CN + DKSGAKWCYVSRGNTCNDVTYSSRKDERGQPR+ISN+AC TPVCN RFT GGQ Sbjct: 22 CNILYLADKSGAKWCYVSRGNTCNDVTYSSRKDERGQPRKISNKACVTPVCNSRFTNGGQ 81
BLAST of EMLSAG00000006139 vs. L. salmonis peptides
Match: EMLSAP00000001011 (pep:novel supercontig:LSalAtl2s:LSalAtl2s116:644091:644652:-1 gene:EMLSAG00000001011 transcript:EMLSAT00000001011 description:"maker-LSalAtl2s116-augustus-gene-6.17") HSP 1 Score: 103.605 bits (257), Expect = 8.353e-27 Identity = 50/80 (62.50%), Postives = 58/80 (72.50%), Query Frame = 0 Query: 57 DIKLKAASLQTNCGCQCNNYIFLDKYGKTQGNCNTVDKSGAKWCYVSRGNTCNDVTYSSRKDERGQPRRISNEACATPVC 136 DI LKA SL NCGCQC+NYIF D G TQGNCN+ D++GAK+CYV G T D S R+D G+ R+ISNEACATP C Sbjct: 19 DITLKAPSLAVNCGCQCSNYIFRDGNGITQGNCNSADRTGAKFCYVEPGXTXQDTRRSGRRDXFGRFRQISNEACATPRC 98
BLAST of EMLSAG00000006139 vs. L. salmonis peptides
Match: EMLSAP00000012322 (pep:novel supercontig:LSalAtl2s:LSalAtl2s8:1311290:1311781:1 gene:EMLSAG00000012322 transcript:EMLSAT00000012322 description:"augustus_masked-LSalAtl2s8-processed-gene-15.4") HSP 1 Score: 99.7525 bits (247), Expect = 2.223e-25 Identity = 48/88 (54.55%), Postives = 61/88 (69.32%), Query Frame = 0 Query: 58 IKLKAASLQTNCGCQCNNYIFLDKYGKTQGNCNTVDKSGAKWCYVSRGNTCNDVTYSSRKDERGQPRRISNEACATPVCNGRFTGGGQ 145 I LKA SL NCGCQC+++IF D++G+TQGNC + D+SGA+WC+V GNTC D ++ RG R ISNEACATP C F G + Sbjct: 20 ITLKAPSLAINCGCQCDSFIFRDRFGQTQGNCRSTDRSGARWCFVRPGNTCTDTSFF-----RG--RTISNEACATPRCGNIFPKGFE 100
BLAST of EMLSAG00000006139 vs. nr
Match: gi|155966135|gb|ABU41022.1| (hypothetical protein [Lepeophtheirus salmonis]) HSP 1 Score: 110.153 bits (274), Expect = 3.753e-26 Identity = 52/80 (65.00%), Postives = 60/80 (75.00%), Query Frame = 0 Query: 57 DIKLKAASLQTNCGCQCNNYIFLDKYGKTQGNCNTVDKSGAKWCYVSRGNTCNDVTYSSRKDERGQPRRISNEACATPVC 136 DI LKA SL NCGCQC+NYIF D G TQGNCN+ D++GAK+CYV GNTC D S R+D G+ R+ISNEACATP C Sbjct: 19 DITLKAPSLAVNCGCQCSNYIFRDGNGITQGNCNSADRTGAKFCYVEPGNTCQDTRRSGRRDNFGRFRQISNEACATPRC 98
BLAST of EMLSAG00000006139 vs. Tigriopus kingsejongenis genes
Match: maker-scaffold381_size190066-snap-gene-0.31 (protein:Tk01605 transcript:maker-scaffold381_size190066-snap-gene-0.31-mRNA-1 annotation:"hypothetical protein") HSP 1 Score: 83.5741 bits (205), Expect = 1.625e-19 Identity = 46/100 (46.00%), Postives = 59/100 (59.00%), Query Frame = 0 Query: 52 IAQKNDIKLKAASLQTNCGCQCNNYIFLDKYGKTQGNCNTVDKSGAKWCYV--SRGNTCNDVTYS-SRKDERGQPRRISNEACATPVCNGRF-TGGGQGG 147 +A+ DI LKA S NCGCQC+ Y + D G+ QGNC + D + A WCY+ S +C D+ S +R D G+PRR S EAC+TP G GQGG Sbjct: 31 VAESGDIVLKAPSNLINCGCQCDPYTWRDTLGRVQGNCRSADATKALWCYIPASAFTSCADIRQSRNRLDNFGRPRRWSYEACSTPALTSPICLGFGQGG 130
BLAST of EMLSAG00000006139 vs. Tigriopus kingsejongenis genes
Match: maker-scaffold381_size190066-snap-gene-0.30 (protein:Tk01607 transcript:maker-scaffold381_size190066-snap-gene-0.30-mRNA-1 annotation:"hypothetical protein AN3340.2") HSP 1 Score: 68.9366 bits (167), Expect = 2.654e-14 Identity = 34/80 (42.50%), Postives = 51/80 (63.75%), Query Frame = 0 Query: 57 DIKLKAASLQTNCGCQCNNYIFLDKYGKTQGNCNTVDKSGAKWCYVSRGN-TCNDVTYS-SRKDERGQPRRISNEACATP 134 +I KA S Q +C CQC+NY + + GNC + D++ AKWCYV + + C+D+ YS +R+D G R+ S +AC+TP Sbjct: 33 EILQKAPSNQVSCNCQCDNYTYKGGDNQIHGNCFSADQTKAKWCYVDQYSGECDDIQYSKNRRDSHGNLRKWSYQACSTP 112
BLAST of EMLSAG00000006139 vs. Tigriopus kingsejongenis genes
Match: maker-scaffold381_size190066-snap-gene-0.32 (protein:Tk01608 transcript:maker-scaffold381_size190066-snap-gene-0.32-mRNA-1 annotation:"---NA---") HSP 1 Score: 66.6254 bits (161), Expect = 2.598e-13 Identity = 33/80 (41.25%), Postives = 48/80 (60.00%), Query Frame = 0 Query: 57 DIKLKAASLQTNCGCQCNNYIFLDKYGKTQGNCNTVDKSGAKWCYVSR-GNTCNDVTYS-SRKDERGQPRRISNEACATP 134 +I KA S + +C CQC+NY + + GNC T D + KWCY+ + N C+D+ YS +R+D G R S +AC+TP Sbjct: 35 EIIQKAPSNRVSCNCQCDNYTYKGDDNQIHGNCFTADHTRGKWCYLDQYNNDCDDIQYSKNRRDSFGNLREWSYQACSTP 114 The following BLAST results are available for this feature:
BLAST of EMLSAG00000006139 vs. GO
Analysis Date: 2014-04-02 (Blast vs. GO) Total hits: 0
BLAST of EMLSAG00000006139 vs. C. finmarchicus
Analysis Date: 2014-05-09 (TblastN vs C. finmarchicus TSA) Total hits: 25
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BLAST of EMLSAG00000006139 vs. L. salmonis peptides
Analysis Date: 2014-05-10 (Blastp vs. self) Total hits: 17
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BLAST of EMLSAG00000006139 vs. SwissProt
Analysis Date: 2017-02-10 (Blastp vs. SwissProt) Total hits: 0
BLAST of EMLSAG00000006139 vs. Select Arthropod Genomes
Analysis Date: 2017-02-20 (Blastp vs. Selected Arthropods) Total hits: 0
BLAST of EMLSAG00000006139 vs. nr
Analysis Date: 2017-02-20 (Blastp vs. NR (2/2017)) Total hits: 1
BLAST of EMLSAG00000006139 vs. Tigriopus kingsejongenis genes
Analysis Date: 2018-04-18 (Blastp vs. Tigriopus kingsejongensis proteins) Total hits: 3
Alignments
The following features are aligned
Analyses
This gene is derived from or has results from the following analyses
Properties
Cross References
External references for this gene
Relationships
The following mRNA feature(s) are a part of this gene:
Sequences
The following sequences are available for this feature:
gene from alignment at LSalAtl2s335:347119..354560+ Legend: mRNA Hold the cursor over a type above to highlight its positions in the sequence below.>EMLSAG00000006139-688905 ID=EMLSAG00000006139-688905|Name=EMLSAG00000006139|organism=Lepeophtheirus salmonis|type=gene|length=7442bp|location=Sequence derived from alignment at LSalAtl2s335:347119..354560+ (Lepeophtheirus salmonis)back to top Add to Basket
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