EMLSAG00000001011, EMLSAG00000001011-683777 (gene) Lepeophtheirus salmonis

Overview
NameEMLSAG00000001011
Unique NameEMLSAG00000001011-683777
Typegene
OrganismLepeophtheirus salmonis (salmon louse)
Associated RNAi Experiments

Nothing found

Homology
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BLAST of EMLSAG00000001011 vs. C. finmarchicus
Match: gi|592772445|gb|GAXK01182123.1| (TSA: Calanus finmarchicus comp899023_c0_seq1 transcribed RNA sequence)

HSP 1 Score: 68.1662 bits (165), Expect = 1.562e-13
Identity = 42/98 (42.86%), Postives = 53/98 (54.08%), Query Frame = 0 
Query:    1 MISKILILSIFVAFGSAQDITLKAPSLAVNCGCQCSNYIFRDGNGITQGNCNSADRTGAKFCYVEPGX--TXQDTXXXXXXXXXXXXXQISNEACATP 96
            M+  IL     ++   AQ+   +A S  VNCGCQCSNY   D  G  QGNC+S D TGA +CYVE G     Q T +  +R      +  S EAC+TP
Sbjct:   17 MLKVILSFVFHLSPSLAQNGQTRAASTLVNCGCQCSNYRVMDRYGELQGNCDSVDNTGAAWCYVEQGEFVKTQSTCQDLKRSQRFPAKFWSYEACSTP 310
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BLAST of EMLSAG00000001011 vs. C. finmarchicus
Match: gi|592932367|gb|GAXK01026186.1| (TSA: Calanus finmarchicus comp18158_c2_seq11 transcribed RNA sequence)

HSP 1 Score: 66.6254 bits (161), Expect = 3.364e-13
Identity = 43/99 (43.43%), Postives = 49/99 (49.49%), Query Frame = 0 
Query:    2 ISKILILSIFVAFG-SAQDITLKAPSLAVNCGCQCSNYIFRDGNGITQGNCNSADRTGAKFCYVEPGX-TXQDTXXXXXXXXXXXXXQISNEACATPRC 98
            IS  LIL    A      D   KA S   NCGCQCSN  F+D  G T GNC   D TGA++CYV+P   + QD             +  S EACATP C
Sbjct:  166 ISTFLILLAPTAESVKTTDTNTKAASPYTNCGCQCSNLTFKDKYGNTHGNCKRVDHTGAQWCYVDPRQGSCQD---LSYTSTRFPGKPWSYEACATPAC 453
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BLAST of EMLSAG00000001011 vs. C. finmarchicus
Match: gi|592932369|gb|GAXK01026184.1| (TSA: Calanus finmarchicus comp18158_c2_seq9 transcribed RNA sequence)

HSP 1 Score: 66.6254 bits (161), Expect = 3.712e-13
Identity = 43/99 (43.43%), Postives = 49/99 (49.49%), Query Frame = 0 
Query:    2 ISKILILSIFVAFG-SAQDITLKAPSLAVNCGCQCSNYIFRDGNGITQGNCNSADRTGAKFCYVEPGX-TXQDTXXXXXXXXXXXXXQISNEACATPRC 98
            IS  LIL    A      D   KA S   NCGCQCSN  F+D  G T GNC   D TGA++CYV+P   + QD             +  S EACATP C
Sbjct:  166 ISTFLILLAPTAESVKTTDTNTKAASPYTNCGCQCSNLTFKDKYGNTHGNCKRVDHTGAQWCYVDPRQGSCQD---LSYTSTRFPGKPWSYEACATPAC 453
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BLAST of EMLSAG00000001011 vs. C. finmarchicus
Match: gi|592848675|gb|GAXK01108869.1| (TSA: Calanus finmarchicus comp296545_c0_seq2 transcribed RNA sequence)

HSP 1 Score: 66.2402 bits (160), Expect = 4.600e-13
Identity = 37/96 (38.54%), Postives = 47/96 (48.96%), Query Frame = 0 
Query:    1 MISKILILSIFVAFGSAQDITLKAPSLAVNCGCQCSNYIFRDGNGITQGNCNSADRTGAKFCYVEPGXTXQDTXXXXXXXXXXXXXQISNEACATP 96
            M S +L+   F      +    KA S   NC CQCS+  F+D  G  QGNCNSAD TGA++CYV+       + +             S EACATP
Sbjct:  130 MFSSLLVFLFFSMAACLRLTGPKAASPYTNCDCQCSSLTFQDKYGRIQGNCNSADHTGARWCYVD--SAHHSSCQDLHHSARFPQNPWSYEACATP 411
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BLAST of EMLSAG00000001011 vs. C. finmarchicus
Match: gi|592932380|gb|GAXK01026173.1| (TSA: Calanus finmarchicus comp18158_c1_seq3 transcribed RNA sequence)

HSP 1 Score: 65.0846 bits (157), Expect = 1.261e-12
Identity = 40/98 (40.82%), Postives = 52/98 (53.06%), Query Frame = 0 
Query:    1 MISKILILSIFVAFGSAQDIT-LKAPSLAVNCGCQCSNYIFRDGNGITQGNCNSADRTGAKFCYVEPGXTX-QDTXXXXXXXXXXXXXQISNEACATP 96
            M++++ IL   V   +   +   KA S   NCGCQCSN  FRD +GI QGNC + D TGA++CYV+   +  QD                S EACATP
Sbjct:  103 MLTQVSILITLVLGATCLSVEKTKAASSFTNCGCQCSNLSFRDTSGIVQGNCKTVDGTGAQWCYVDSSSSSCQD----LVPSERFPHNPWSYEACATP 384
[Close]
BLAST of EMLSAG00000001011 vs. C. finmarchicus
Match: gi|592932365|gb|GAXK01026188.1| (TSA: Calanus finmarchicus comp18158_c2_seq13 transcribed RNA sequence)

HSP 1 Score: 63.929 bits (154), Expect = 1.701e-12
Identity = 36/72 (50.00%), Postives = 39/72 (54.17%), Query Frame = 0 
Query:   29 VNCGCQCSNYIFRDGNGITQGNCNSADRTGAKFCYVEPGXTX--QDTXXXXXXXXXXXXXQISNEACATPRC 98
             NCGCQCSN  FRD  G T GNC S+D TGA +CYV P  T   QD             +  S EACATP C
Sbjct:    1 TNCGCQCSNLTFRDKYGKTHGNCKSSDHTGAVWCYVSPAQTSSCQD---LSYTSTRFPGKPWSYEACATPAC 207
[Close]
BLAST of EMLSAG00000001011 vs. C. finmarchicus
Match: gi|592932366|gb|GAXK01026187.1| (TSA: Calanus finmarchicus comp18158_c2_seq12 transcribed RNA sequence)

HSP 1 Score: 63.929 bits (154), Expect = 2.030e-12
Identity = 36/72 (50.00%), Postives = 39/72 (54.17%), Query Frame = 0 
Query:   29 VNCGCQCSNYIFRDGNGITQGNCNSADRTGAKFCYVEPGXTX--QDTXXXXXXXXXXXXXQISNEACATPRC 98
             NCGCQCSN  FRD  G T GNC S+D TGA +CYV P  T   QD             +  S EACATP C
Sbjct:    1 TNCGCQCSNLTFRDKYGKTHGNCKSSDHTGAVWCYVSPAQTSSCQD---LSYTSTRFPGKPWSYEACATPAC 207
[Close]
BLAST of EMLSAG00000001011 vs. C. finmarchicus
Match: gi|592848676|gb|GAXK01108868.1| (TSA: Calanus finmarchicus comp296545_c0_seq1 transcribed RNA sequence)

HSP 1 Score: 64.3142 bits (155), Expect = 4.879e-12
Identity = 37/96 (38.54%), Postives = 47/96 (48.96%), Query Frame = 0 
Query:    1 MISKILILSIFVAFGSAQDITLKAPSLAVNCGCQCSNYIFRDGNGITQGNCNSADRTGAKFCYVEPGXTXQDTXXXXXXXXXXXXXQISNEACATP 96
            M S +L+   F      +    KA S   NC CQCS+  F+D  G  QGNCNSAD TGA++CYV+       + +             S EACATP
Sbjct:  139 MFSSLLVFLFFSMAACLRLTGPKAASPYTNCDCQCSSLNFQDKYGRIQGNCNSADHTGARWCYVD--SAHHSSCQDLHHSVRFPNNPWSYEACATP 420

HSP 2 Score: 63.5438 bits (153), Expect = 9.144e-12
Identity = 37/92 (40.22%), Postives = 48/92 (52.17%), Query Frame = 0 
Query:    8 LSIFVAFGSAQDITLKAPSLA---VNCGCQCSNYIFRDGNGITQGNCNSADRTGAKFCYVEPGXTXQDTXXXXXXXXXXXXXQISNEACATP 96
            L +F+ F  A  + L  P  A    NC CQCS+  F+D  G  QGNCNSAD TGA++CYV+       + +  +          S EACATP
Sbjct:  458 LLVFLFFSMATCLRLTGPKAASPYTNCDCQCSSLTFQDKYGRIQGNCNSADHTGARWCYVD--SAHHSSCQDLQHSARFPQNPWSYEACATP 727
[Close]
BLAST of EMLSAG00000001011 vs. C. finmarchicus
Match: gi|592932382|gb|GAXK01026171.1| (TSA: Calanus finmarchicus comp18158_c1_seq1 transcribed RNA sequence)

HSP 1 Score: 63.929 bits (154), Expect = 1.120e-11
Identity = 38/97 (39.18%), Postives = 52/97 (53.61%), Query Frame = 0 
Query:    1 MISKILILSIFVAFGSAQDIT-LKAPSLAVNCGCQCSNYIFRDGNGITQGNCNSADRTGAKFCYVEPGXTXQDTXXXXXXXXXXXXXQISNEACATP 96
            M++++ IL   V   +   +   KA S   NCGCQCSN  FRD +GI QGNC + D TGA++CYV+   +   + +             S EACATP
Sbjct:  103 MLTQVSILITLVLGATCLSVEKTKAASSFTNCGCQCSNLSFRDTSGIVQGNCKTVDGTGAQWCYVD---SSSSSCQDLVPSERFPHNPWSYEACATP 384
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BLAST of EMLSAG00000001011 vs. C. finmarchicus
Match: gi|592932379|gb|GAXK01026174.1| (TSA: Calanus finmarchicus comp18158_c1_seq4 transcribed RNA sequence)

HSP 1 Score: 60.8474 bits (146), Expect = 2.803e-11
Identity = 34/75 (45.33%), Postives = 41/75 (54.67%), Query Frame = 0 
Query:   23 KAPSLAVNCGCQCSNYIFRDGNGITQGNCNSADRTGAKFCYVEPGXTX-QDTXXXXXXXXXXXXXQISNEACATP 96
            KA S   NCGCQCS+  FRD +G  QGNC + D TGA++CYV+   +  QD                S EACATP
Sbjct:  109 KAASPFTNCGCQCSSLTFRDTSGTVQGNCKTVDGTGAQWCYVDSSSSSCQD----LVPSERFPHNPWSYEACATP 321
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BLAST of EMLSAG00000001011 vs. L. salmonis peptides
Match: EMLSAP00000001011 (pep:novel supercontig:LSalAtl2s:LSalAtl2s116:644091:644652:-1 gene:EMLSAG00000001011 transcript:EMLSAT00000001011 description:"maker-LSalAtl2s116-augustus-gene-6.17")

HSP 1 Score: 311.227 bits (796), Expect = 4.373e-109
Identity = 163/163 (100.00%), Postives = 163/163 (100.00%), Query Frame = 0 
Query:    1 MISKILILSIFVAFGSAQDITLKAPSLAVNCGCQCSNYIFRDGNGITQGNCNSADRTGAKFCYVEPGXTXQDTRRSGRRDXFGRFRQISNEACATPRCGGGFLGGFGNNNNGFGNKNGFGNKNGFGNNNNGFGNKGFRRPNGGGVSISNILKPRSNQNSDIVL 163
            MISKILILSIFVAFGSAQDITLKAPSLAVNCGCQCSNYIFRDGNGITQGNCNSADRTGAKFCYVEPGXTXQDTRRSGRRDXFGRFRQISNEACATPRCGGGFLGGFGNNNNGFGNKNGFGNKNGFGNNNNGFGNKGFRRPNGGGVSISNILKPRSNQNSDIVL
Sbjct:    1 MISKILILSIFVAFGSAQDITLKAPSLAVNCGCQCSNYIFRDGNGITQGNCNSADRTGAKFCYVEPGXTXQDTRRSGRRDXFGRFRQISNEACATPRCGGGFLGGFGNNNNGFGNKNGFGNKNGFGNNNNGFGNKGFRRPNGGGVSISNILKPRSNQNSDIVL 163
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BLAST of EMLSAG00000001011 vs. L. salmonis peptides
Match: EMLSAP00000001015 (pep:novel supercontig:LSalAtl2s:LSalAtl2s116:786764:792986:-1 gene:EMLSAG00000001015 transcript:EMLSAT00000001015 description:"maker-LSalAtl2s116-augustus-gene-8.13")

HSP 1 Score: 185.652 bits (470), Expect = 5.327e-59
Identity = 90/98 (91.84%), Postives = 91/98 (92.86%), Query Frame = 0 
Query:    1 MISKILILSIFVAFGSAQDITLKAPSLAVNCGCQCSNYIFRDGNGITQGNCNSADRTGAKFCYVEPGXTXQDTRRSGRRDXFGRFRQISNEACATPRC 98
            MISKILILSIFVAFGSAQDITLKAPSLAVNCGCQCSNYIFRDGNGITQGNCNSADRTGAK+CYVE G T QDTRRS RRD FGR RQIS EACATPRC
Sbjct:    1 MISKILILSIFVAFGSAQDITLKAPSLAVNCGCQCSNYIFRDGNGITQGNCNSADRTGAKWCYVERGHTCQDTRRSXRRDNFGRLRQISYEACATPRC 98

HSP 2 Score: 107.842 bits (268), Expect = 4.952e-29
Identity = 52/53 (98.11%), Postives = 52/53 (98.11%), Query Frame = 0 
Query:    1 MISKILILSIFVAFGSAQDITLKAPSLAVNCGCQCSNYIFRDGNGITQGNCNS 53
            MISKILILSIFV FGSAQDITLKAPSLAVNCGCQCSNYIFRDGNGITQGNCNS
Sbjct:  172 MISKILILSIFVVFGSAQDITLKAPSLAVNCGCQCSNYIFRDGNGITQGNCNS 224
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BLAST of EMLSAG00000001011 vs. L. salmonis peptides
Match: EMLSAP00000007123 (pep:novel supercontig:LSalAtl2s:LSalAtl2s401:84241:84844:-1 gene:EMLSAG00000007123 transcript:EMLSAT00000007123 description:"maker-LSalAtl2s401-augustus-gene-0.14")

HSP 1 Score: 167.548 bits (423), Expect = 1.253e-52
Identity = 109/167 (65.27%), Postives = 116/167 (69.46%), Query Frame = 0 
Query:    1 MISKILILSIFVAFGSAQDITLKAPSLAVNCGCQCSNYIFRDGNGITQGNCNSADRTGAKFCYVEPGXTXQDTRRSGRRDXFGRFRQISNEACATPRCGGGFLGGFGNNNNGFGNKNGFGNKNGFGNNNNGF-------GNKGFRRPN--GGGVSISNILKPRSNQN 158
            MI K LI+S+ VA  SAQDITLKAPSLAVNCGCQCSNYIFRD  GITQGNCNSADRTGAK+CYV+ G T QDTR SGR D FGR RQIS EACATPRCGGGF GGFG       N    GN    GN   G        G  G  RP+  G G+SISNILKPR  Q+
Sbjct:    1 MICKFLIISVVVALTSAQDITLKAPSLAVNCGCQCSNYIFRDLRGITQGNCNSADRTGAKWCYVDRGHTCQDTRGSGRNDQFGRRRQISYEACATPRCGGGFGGGFGGRFTNNNNNGFGGNTGFGGNTGFGGNAGFGNSGLSGLFRPSGTGSGISISNILKPRRTQS 167
[Close]
BLAST of EMLSAG00000001011 vs. L. salmonis peptides
Match: EMLSAP00000007122 (pep:novel supercontig:LSalAtl2s:LSalAtl2s401:64891:74089:-1 gene:EMLSAG00000007122 transcript:EMLSAT00000007122 description:"maker-LSalAtl2s401-augustus-gene-0.13")

HSP 1 Score: 162.925 bits (411), Expect = 1.516e-50
Identity = 79/98 (80.61%), Postives = 84/98 (85.71%), Query Frame = 0 
Query:    1 MISKILILSIFVAFGSAQDITLKAPSLAVNCGCQCSNYIFRDGNGITQGNCNSADRTGAKFCYVEPGXTXQDTRRSGRRDXFGRFRQISNEACATPRC 98
            MI K LI+S+ VA  SAQDITLKAPSLAVNCGCQCSNYIFRD  GITQGNCNSADRTGAK+CYV+ G T QDTR SGR+D FGR RQIS EACATPRC
Sbjct:   99 MICKFLIISVVVALTSAQDITLKAPSLAVNCGCQCSNYIFRDLRGITQGNCNSADRTGAKWCYVDRGHTCQDTRGSGRKDQFGRRRQISYEACATPRC 196

HSP 2 Score: 150.214 bits (378), Expect = 1.174e-45
Identity = 74/92 (80.43%), Postives = 79/92 (85.87%), Query Frame = 0 
Query:    1 MISKILILSIFVAFGSAQDITLKAPSLAVNCGCQCSNYIFRDGNGITQGNCNSADRTGAKFCYVEPGXTXQDTRRSGRRDXFGRFRQISNEA 92
            MI KILI+S+ VA  SAQDITLKAPSLAVNCGCQCSNYIFRD  GITQGNCNSAD+TGAK+CYV+ G T QDTR SGRRD FGR RQIS EA
Sbjct:    1 MICKILIISVVVALTSAQDITLKAPSLAVNCGCQCSNYIFRDLRGITQGNCNSADQTGAKWCYVDRGHTCQDTRGSGRRDQFGRRRQISYEA 92
[Close]
BLAST of EMLSAG00000001011 vs. L. salmonis peptides
Match: EMLSAP00000007117 (pep:novel supercontig:LSalAtl2s:LSalAtl2s401:30551:49956:-1 gene:EMLSAG00000007117 transcript:EMLSAT00000007117 description:"maker-LSalAtl2s401-augustus-gene-0.12")

HSP 1 Score: 154.836 bits (390), Expect = 9.030e-47
Identity = 76/98 (77.55%), Postives = 81/98 (82.65%), Query Frame = 0 
Query:    1 MISKILILSIFVAFGSAQDITLKAPSLAVNCGCQCSNYIFRDGNGITQGNCNSADRTGAKFCYVEPGXTXQDTRRSGRRDXFGRFRQISNEACATPRC 98
            MI KILI+S+ VA  SAQDITLKAPSLAVNCGCQCSNYIFRD  GITQGNCNSAD+TGAK+CYV+ G T QDT  S R D FGR RQIS EACATP C
Sbjct:   56 MICKILIISVVVALTSAQDITLKAPSLAVNCGCQCSNYIFRDLRGITQGNCNSADQTGAKWCYVDRGHTCQDTIGSARNDQFGRRRQISYEACATPNC 153

HSP 2 Score: 132.88 bits (333), Expect = 2.146e-38
Identity = 67/90 (74.44%), Postives = 71/90 (78.89%), Query Frame = 0 
Query:   19 DITLKAPSLAVNCGCQCSNYIFRDGNGITQGNCNSADRTGAKFCYVEPGXTXQDTRRSGRRDXFGRFRQISNEACATPRCGGGFLGGFGN 108
            DITLKAPSLAVNCGCQCS YIF+D  GITQGNCNSAD+TGAK+CYV  G T Q TR SGR   FGR RQIS EACATPRCGGG +    N
Sbjct:  154 DITLKAPSLAVNCGCQCSIYIFQDVRGITQGNCNSADQTGAKWCYVNRGYTCQYTRGSGRNYQFGRRRQISYEACATPRCGGGLIQSRSN 243

HSP 3 Score: 94.3597 bits (233), Expect = 7.737e-24
Identity = 44/54 (81.48%), Postives = 47/54 (87.04%), Query Frame = 0 
Query:    1 MISKILILSIFVAFGSAQDITLKAPSLAVNCGCQCSNYIFRDGNGITQGNCNSA 54
            MI KILI+S+ V   SAQDITLKAPSLAVNCGCQCSNYIF+D  GITQGNCNSA
Sbjct:    1 MICKILIISVVVVLASAQDITLKAPSLAVNCGCQCSNYIFQDVRGITQGNCNSA 54
[Close]
BLAST of EMLSAG00000001011 vs. L. salmonis peptides
Match: EMLSAP00000012322 (pep:novel supercontig:LSalAtl2s:LSalAtl2s8:1311290:1311781:1 gene:EMLSAG00000012322 transcript:EMLSAT00000012322 description:"augustus_masked-LSalAtl2s8-processed-gene-15.4")

HSP 1 Score: 127.102 bits (318), Expect = 4.337e-37
Identity = 65/108 (60.19%), Postives = 78/108 (72.22%), Query Frame = 0 
Query:    1 MISKILILSIFVAFGSAQDITLKAPSLAVNCGCQCSNYIFRDGNGITQGNCNSADRTGAKFCYVEPGXTXQDTRRSGRRDXFGRFRQISNEACATPRCGGGFLGGFGN 108
            MI+KI++LS  VA+ ++Q ITLKAPSLA+NCGCQC ++IFRD  G TQGNC S DR+GA++C+V PG T  DT        F R R ISNEACATPRCG  F  GF N
Sbjct:    1 MIAKIILLSALVAYVTSQGITLKAPSLAINCGCQCDSFIFRDRFGQTQGNCRSTDRSGARWCFVRPGNTCTDT-------SFFRGRTISNEACATPRCGNIFPKGFEN 101
[Close]
BLAST of EMLSAG00000001011 vs. L. salmonis peptides
Match: EMLSAP00000006141 (pep:novel supercontig:LSalAtl2s:LSalAtl2s335:388935:390297:1 gene:EMLSAG00000006141 transcript:EMLSAT00000006141 description:"maker-LSalAtl2s335-snap-gene-4.14")

HSP 1 Score: 111.694 bits (278), Expect = 6.519e-31
Identity = 59/104 (56.73%), Postives = 70/104 (67.31%), Query Frame = 0 
Query:    1 MISKILILSIFVAFGSAQ--DITLKAPSLAVNCGCQCSNYIFRDGNGITQGNCNSADRTGAKFCYVEPGXTXQDTRRSGRRDXFGRFRQISNEACATPRCGGGF 102
            M  K+ IL +  A   AQ  DI LKA S   NCGCQC+NYIF+D  G TQGNCN+AD++GAK+CYV  G T  D   S R+D  G+ R+ISNEACATP C G F
Sbjct:    1 MYLKLGILLVVCACAIAQKNDIILKAASSRTNCGCQCNNYIFKDKYGRTQGNCNTADKSGAKWCYVSRGNTCNDVTYSSRKDERGQPRRISNEACATPVCNGRF 104
[Close]
BLAST of EMLSAG00000001011 vs. L. salmonis peptides
Match: EMLSAP00000006139 (pep:novel supercontig:LSalAtl2s:LSalAtl2s335:347119:354560:1 gene:EMLSAG00000006139 transcript:EMLSAT00000006139 description:"snap_masked-LSalAtl2s335-processed-gene-4.8")

HSP 1 Score: 108.227 bits (269), Expect = 1.136e-28
Identity = 53/93 (56.99%), Postives = 61/93 (65.59%), Query Frame = 0 
Query:   10 IFVAFGSAQDITLKAPSLAVNCGCQCSNYIFRDGNGITQGNCNSADRTGAKFCYVEPGXTXQDTRRSGRRDXFGRFRQISNEACATPRCGGGF 102
            I        DI LKA SL  NCGCQC+NYIF D  G TQGNCN+ D++GAK+CYV  G T  D   S R+D  G+ R+ISNEACATP C G F
Sbjct:   48 IACTIAQKNDIKLKAASLQTNCGCQCNNYIFLDKYGKTQGNCNTVDKSGAKWCYVSRGNTCNDVTYSSRKDERGQPRRISNEACATPVCNGRF 140
[Close]
BLAST of EMLSAG00000001011 vs. L. salmonis peptides
Match: EMLSAP00000004889 (pep:novel supercontig:LSalAtl2s:LSalAtl2s257:179358:180381:1 gene:EMLSAG00000004889 transcript:EMLSAT00000004889 description:"maker-LSalAtl2s257-augustus-gene-1.12")

HSP 1 Score: 89.3521 bits (220), Expect = 2.193e-23
Identity = 50/94 (53.19%), Postives = 58/94 (61.70%), Query Frame = 0 
Query:   11 FVAFGSAQD-ITLKAPSLAVNCGCQCSNYIFRDGNGITQGNCNSADRTGAKFCYVEPGXTXQDTRRSGRRDXFGRFR-QISNEACATPRCGGGF 102
             +   SAQ+ I LKAPSL  NCGCQCS+  F D  G  QGNC SAD TGA++CY+    T  D + S       RFR Q S EACATPRCGG +
Sbjct:    1 MLTLSSAQNGIILKAPSLVQNCGCQCSSLTFADSYGRIQGNCRSADYTGARWCYIPFSHTCNDAQYS------SRFRNQWSYEACATPRCGGLY 88
[Close]
BLAST of EMLSAG00000001011 vs. L. salmonis peptides
Match: EMLSAP00000006138 (pep:novel supercontig:LSalAtl2s:LSalAtl2s335:340556:341608:-1 gene:EMLSAG00000006138 transcript:EMLSAT00000006138 description:"maker-LSalAtl2s335-snap-gene-3.5")

HSP 1 Score: 90.1225 bits (222), Expect = 6.062e-23
Identity = 49/101 (48.51%), Postives = 60/101 (59.41%), Query Frame = 0 
Query:    2 ISKILILSIFVAFGSAQDITLKAPSLAVNCGCQCSNYIFRDGNGITQGNCNSADRTGAKFCYVEPGXTXQDTRRSGRRDXFGRFRQISNEACATPRCGGGF 102
            ++ +L   +F A    +DITLKA SL  NCGCQC N ++ D   +        D+TGAK+CYV  G T  D   S RRD  G+ RQISNEACATP C G F
Sbjct:    5 LAILLFCFLFCAIAQNKDITLKAASLKSNCGCQC-NXLWEDTRKL-------VDKTGAKWCYVSRGNTCNDVTYSKRRDERGQPRQISNEACATPTCNGRF 97
[Close]
BLAST of EMLSAG00000001011 vs. nr
Match: gi|155966135|gb|ABU41022.1| (hypothetical protein [Lepeophtheirus salmonis])

HSP 1 Score: 227.254 bits (578), Expect = 9.799e-74
Identity = 156/163 (95.71%), Postives = 157/163 (96.32%), Query Frame = 0 
Query:    1 MISKILILSIFVAFGSAQDITLKAPSLAVNCGCQCSNYIFRDGNGITQGNCNSADRTGAKFCYVEPGXTXQDTRRSGRRDXFGRFRQISNEACATPRCGGGFLGGFGNNNNGFGNKNGFGNKNGFGNNNNGFGNKGFRRPNGGGVSISNILKPRSNQNSDIVL 163
            MISKILI+SIFVAFGSAQDITLKAPSLAVNCGCQCSNYIFRDGNGITQGNCNSADRTGAKFCYVEPG T QDTRRSGRRD FGRFRQISNEACATPRCGGGFLGGFGNNNNGFGN NGFGN NGFGNNNNGFGN GFRRPNGGGVSISNILKPRSNQNSDIVL
Sbjct:    1 MISKILIVSIFVAFGSAQDITLKAPSLAVNCGCQCSNYIFRDGNGITQGNCNSADRTGAKFCYVEPGNTCQDTRRSGRRDNFGRFRQISNEACATPRCGGGFLGGFGNNNNGFGNNNGFGNNNGFGNNNNGFGNNGFRRPNGGGVSISNILKPRSNQNSDIVL 163
[Close]
BLAST of EMLSAG00000001011 vs. Tigriopus kingsejongenis genes
Match: maker-scaffold381_size190066-snap-gene-0.31 (protein:Tk01605 transcript:maker-scaffold381_size190066-snap-gene-0.31-mRNA-1 annotation:"hypothetical protein")

HSP 1 Score: 84.7297 bits (208), Expect = 3.008e-21
Identity = 46/93 (49.46%), Postives = 54/93 (58.06%), Query Frame = 0 
Query:   19 DITLKAPSLAVNCGCQCSNYIFRDGNGITQGNCNSADRTGAKFCYVEPG--XTXQDTRRS-GRRDXFGRFRQISNEACATPRCGGGFLGGFGN 108
            DI LKAPS  +NCGCQC  Y +RD  G  QGNC SAD T A +CY+      +  D R+S  R D FGR R+ S EAC+TP        GFG 
Sbjct:   36 DIVLKAPSNLINCGCQCDPYTWRDTLGRVQGNCRSADATKALWCYIPASAFTSCADIRQSRNRLDNFGRPRRWSYEACSTPALTSPICLGFGQ 128
[Close]
BLAST of EMLSAG00000001011 vs. Tigriopus kingsejongenis genes
Match: maker-scaffold381_size190066-snap-gene-0.30 (protein:Tk01607 transcript:maker-scaffold381_size190066-snap-gene-0.30-mRNA-1 annotation:"hypothetical protein AN3340.2")

HSP 1 Score: 74.7146 bits (182), Expect = 1.516e-17
Identity = 42/108 (38.89%), Postives = 57/108 (52.78%), Query Frame = 0 
Query:    1 MISKILILSIFV-AFGSAQD--------ITLKAPSLAVNCGCQCSNYIFRDGNGITQGNCNSADRTGAKFCYVE--PGXTXQDTRRSGRRDXFGRFRQISNEACATPR 97
            ++S +L L+    A   A+D        I  KAPS  V+C CQC NY ++ G+    GNC SAD+T AK+CYV+   G          RRD  G  R+ S +AC+TP 
Sbjct:    6 ILSTVLALTALTQAQDEAEDGVDTKSVEILQKAPSNQVSCNCQCDNYTYKGGDNQIHGNCFSADQTKAKWCYVDQYSGECDDIQYSKNRRDSHGNLRKWSYQACSTPE 113
[Close]
BLAST of EMLSAG00000001011 vs. Tigriopus kingsejongenis genes
Match: maker-scaffold381_size190066-snap-gene-0.32 (protein:Tk01608 transcript:maker-scaffold381_size190066-snap-gene-0.32-mRNA-1 annotation:"---NA---")

HSP 1 Score: 67.3958 bits (163), Expect = 1.053e-14
Identity = 34/83 (40.96%), Postives = 48/83 (57.83%), Query Frame = 0 
Query:   19 DITLKAPSLAVNCGCQCSNYIFRDGNGITQGNCNSADRTGAKFCYVEPGXTXQDTRRSG--RRDXFGRFRQISNEACATPRCG 99
            +I  KAPS  V+C CQC NY ++  +    GNC +AD T  K+CY++      D  +    RRD FG  R+ S +AC+TP+ G
Sbjct:   35 EIIQKAPSNRVSCNCQCDNYTYKGDDNQIHGNCFTADHTRGKWCYLDQYNNDCDDIQYSKNRRDSFGNLREWSYQACSTPQLG 117
The following BLAST results are available for this feature:
BLAST of EMLSAG00000001011 vs. GO
Analysis Date: 2014-04-02 (Blast vs. GO)
Total hits: 0
Match NameE-valueIdentityDescription
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BLAST of EMLSAG00000001011 vs. C. finmarchicus
Analysis Date: 2014-05-09 (TblastN vs C. finmarchicus TSA)
Total hits: 25
Match NameE-valueIdentityDescription
gi|592772445|gb|GAXK01182123.1|1.562e-1342.86TSA: Calanus finmarchicus comp899023_c0_seq1 trans... [more]
gi|592932367|gb|GAXK01026186.1|3.364e-1343.43TSA: Calanus finmarchicus comp18158_c2_seq11 trans... [more]
gi|592932369|gb|GAXK01026184.1|3.712e-1343.43TSA: Calanus finmarchicus comp18158_c2_seq9 transc... [more]
gi|592848675|gb|GAXK01108869.1|4.600e-1338.54TSA: Calanus finmarchicus comp296545_c0_seq2 trans... [more]
gi|592932380|gb|GAXK01026173.1|1.261e-1240.82TSA: Calanus finmarchicus comp18158_c1_seq3 transc... [more]
gi|592932365|gb|GAXK01026188.1|1.701e-1250.00TSA: Calanus finmarchicus comp18158_c2_seq13 trans... [more]
gi|592932366|gb|GAXK01026187.1|2.030e-1250.00TSA: Calanus finmarchicus comp18158_c2_seq12 trans... [more]
gi|592848676|gb|GAXK01108868.1|4.879e-1238.54TSA: Calanus finmarchicus comp296545_c0_seq1 trans... [more]
gi|592932382|gb|GAXK01026171.1|1.120e-1139.18TSA: Calanus finmarchicus comp18158_c1_seq1 transc... [more]
gi|592932379|gb|GAXK01026174.1|2.803e-1145.33TSA: Calanus finmarchicus comp18158_c1_seq4 transc... [more]

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BLAST of EMLSAG00000001011 vs. L. salmonis peptides
Analysis Date: 2014-05-10 (Blastp vs. self)
Total hits: 17
Match NameE-valueIdentityDescription
EMLSAP000000010114.373e-109100.00pep:novel supercontig:LSalAtl2s:LSalAtl2s116:64409... [more]
EMLSAP000000010155.327e-5991.84pep:novel supercontig:LSalAtl2s:LSalAtl2s116:78676... [more]
EMLSAP000000071231.253e-5265.27pep:novel supercontig:LSalAtl2s:LSalAtl2s401:84241... [more]
EMLSAP000000071221.516e-5080.61pep:novel supercontig:LSalAtl2s:LSalAtl2s401:64891... [more]
EMLSAP000000071179.030e-4777.55pep:novel supercontig:LSalAtl2s:LSalAtl2s401:30551... [more]
EMLSAP000000123224.337e-3760.19pep:novel supercontig:LSalAtl2s:LSalAtl2s8:1311290... [more]
EMLSAP000000061416.519e-3156.73pep:novel supercontig:LSalAtl2s:LSalAtl2s335:38893... [more]
EMLSAP000000061391.136e-2856.99pep:novel supercontig:LSalAtl2s:LSalAtl2s335:34711... [more]
EMLSAP000000048892.193e-2353.19pep:novel supercontig:LSalAtl2s:LSalAtl2s257:17935... [more]
EMLSAP000000061386.062e-2348.51pep:novel supercontig:LSalAtl2s:LSalAtl2s335:34055... [more]

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BLAST of EMLSAG00000001011 vs. SwissProt
Analysis Date: 2017-02-10 (Blastp vs. SwissProt)
Total hits: 0
Match NameE-valueIdentityDescription
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BLAST of EMLSAG00000001011 vs. Select Arthropod Genomes
Analysis Date: 2017-02-20 (Blastp vs. Selected Arthropods)
Total hits: 0
Match NameE-valueIdentityDescription
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BLAST of EMLSAG00000001011 vs. nr
Analysis Date: 2017-02-20 (Blastp vs. NR (2/2017))
Total hits: 1
Match NameE-valueIdentityDescription
gi|155966135|gb|ABU41022.1|9.799e-7495.71hypothetical protein [Lepeophtheirus salmonis][more]
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BLAST of EMLSAG00000001011 vs. Tigriopus kingsejongenis genes
Analysis Date: 2018-04-18 (Blastp vs. Tigriopus kingsejongensis proteins)
Total hits: 3
Match NameE-valueIdentityDescription
maker-scaffold381_size190066-snap-gene-0.313.008e-2149.46protein:Tk01605 transcript:maker-scaffold381_size1... [more]
maker-scaffold381_size190066-snap-gene-0.301.516e-1738.89protein:Tk01607 transcript:maker-scaffold381_size1... [more]
maker-scaffold381_size190066-snap-gene-0.321.053e-1440.96protein:Tk01608 transcript:maker-scaffold381_size1... [more]
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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
LSalAtl2s116supercontigLSalAtl2s116:644091..644652 -
Analyses
This gene is derived from or has results from the following analyses
Analysis NameDate Performed
ensembl2013-09-26 .965016
Blast vs. GO2014-04-02
TblastN vs C. finmarchicus TSA2014-05-09
Blastp vs. self2014-05-10
Blastp vs. SwissProt2017-02-10
Blastp vs. Selected Arthropods2017-02-20
Blastp vs. NR (2/2017)2017-02-20
Blastp vs. Tigriopus kingsejongensis proteins2018-04-18
Properties
Property NameValue
Logic nameensemblgenomes
Descriptionmaker-LSalAtl2s116-augustus-gene-6.17
Biotypeprotein_coding
EvidenceIEA
Notehypothetical protein [Lepeophtheirus salmonis]
Cross References
External references for this gene
DatabaseAccession
Ensembl Metazoa (gene)EMLSAG00000001011 (primary cross-reference)
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameSpeciesType
EMLSAT00000001011EMLSAT00000001011-696858Lepeophtheirus salmonismRNA


Sequences
The following sequences are available for this feature:

gene from alignment at LSalAtl2s116:644091..644652-

Legend: mRNA
Hold the cursor over a type above to highlight its positions in the sequence below.
>EMLSAG00000001011-683777 ID=EMLSAG00000001011-683777|Name=EMLSAG00000001011|organism=Lepeophtheirus salmonis|type=gene|length=562bp|location=Sequence derived from alignment at LSalAtl2s116:644091..644652- (Lepeophtheirus salmonis)
ATGATTTCCAAGATTTTAATTCTCTCCATTTTTGTGGCCTTTGGATCTGC
TCAAGACATTACACTCAAAGCACCTTCCCTCGCAGTTAATTGTGGATGCC
AATGCTCCAATTATATATTCAGAGATGGTAATGGAATAACACAAGGAAAC
TGCAACTCGTAAGTTGATCTTCTTTGATTTAGTTAGAAAGATGATTTTTA
TCTAAGAATACCCTTTTTTAATATTCAGAGCGGATAGAACCGGAGCAAAA
TTTTGCTATGTTGAGCCKGGCKARACTTGRCAAGATACAAGACGATCCGG
TCGTAGAGACAANTTTGGAAGATTCCGTCAAATTTCTAATGAAGCTTGCG
CTACTCCAAGATGTGGAGGAGGCTTTTTAGGAGGATTCGGAAATAATAAC
AACGGATTTGGAAACAARAATGGATTTGGAAACAARAACGGATTCGGAAA
TAACAACAATGGATTTGGCAATAARGGATTCAGAAGACCCAATGGWGGTG
GTGTCAGTATTTCTAACATCTTGAAACCAAGAAGTAATCAAAACTCCGAT
ATTGTTCTTTAA
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