EMLSAG00000006239, EMLSAG00000006239-689005 (gene) Lepeophtheirus salmonis

Overview
NameEMLSAG00000006239
Unique NameEMLSAG00000006239-689005
Typegene
OrganismLepeophtheirus salmonis (salmon louse)
Associated RNAi Experiments

Nothing found

Homology
[Close]
BLAST of EMLSAG00000006239 vs. C. finmarchicus
Match: gi|592867996|gb|GAXK01089566.1| (TSA: Calanus finmarchicus comp421231_c0_seq2 transcribed RNA sequence)

HSP 1 Score: 40.4318 bits (93), Expect = 1.010e-3
Identity = 46/124 (37.10%), Postives = 61/124 (49.19%), Query Frame = 0 
Query:   59 TCKDYNGIC--FNEDSQXTIN-SNLLYECPKTCAKCDL-CEDLIDSSICE--TRLSECALKK--MKYACRKSCKYCK----DACNDVGSHDFCDVHVRRGDCEK---NETVKRMCRKSCELCEI 167
            TCKD N  C  +   S+ T N S +L  CP  C +CDL CED   ++ CE  TR+ EC   +  M   CRKSC  C      AC D  +   C+   R+G C      + V+  CRK+C  C +
Sbjct:   72 TCKDDNIYCATWASLSECTANPSWMLVHCPIACDQCDLTCEDY--NTYCEEWTRVGECYNNREYMGIYCRKSCSLCSPPPAPACQDSDAKR-CERWGRKGFCTSVRYRDFVRDKCRKTCRSCSV 434
[Close]
BLAST of EMLSAG00000006239 vs. C. finmarchicus
Match: gi|592867997|gb|GAXK01089565.1| (TSA: Calanus finmarchicus comp421231_c0_seq1 transcribed RNA sequence)

HSP 1 Score: 40.4318 bits (93), Expect = 1.087e-3
Identity = 46/124 (37.10%), Postives = 61/124 (49.19%), Query Frame = 0 
Query:   59 TCKDYNGIC--FNEDSQXTIN-SNLLYECPKTCAKCDL-CEDLIDSSICE--TRLSECALKK--MKYACRKSCKYCK----DACNDVGSHDFCDVHVRRGDCEK---NETVKRMCRKSCELCEI 167
            TCKD N  C  +   S+ T N S +L  CP  C +CDL CED   ++ CE  TR+ EC   +  M   CRKSC  C      AC D  +   C+   R+G C      + V+  CRK+C  C +
Sbjct:   72 TCKDDNIYCATWASLSECTANPSWMLVHCPIACDQCDLTCEDY--NTYCEEWTRVGECYNNREYMGIYCRKSCSLCSPPPAPACQDSDAKR-CERWGRKGFCTSVRYRDFVRDKCRKTCRSCSV 434
[Close]
BLAST of EMLSAG00000006239 vs. C. finmarchicus
Match: gi|592883856|gb|GAXK01074519.1| (TSA: Calanus finmarchicus comp501100_c1_seq2 transcribed RNA sequence)

HSP 1 Score: 35.4242 bits (80), Expect = 8.407e-2
Identity = 38/135 (28.15%), Postives = 63/135 (46.67%), Query Frame = 0 
Query:   51 ETCGVCNTTCKDYNGIC------FNEDSQXTINSNLLYECPKTCAKCDLCED------LIDSSICETR-LSECAL-KKMKYACRKSCKYCKDACNDVGSHDFCDVHVRRGDCEKN---ETVKRMCRKSCELCEIE 168
             +C +C  T K    I        NE+    I +NLLYE    CA+CD   +       +D  I E++ L+E  L ++ KY+C + CK      +D+ +H   +VH+   + E N   + V ++ R  C  C ++
Sbjct: 1868 HSCKMCRFTAKHQYEIVKHIKSKHNEEDPGIILNNLLYE----CAECDFVAEKGIFLVHVDKHITESKPLTEQVLEEQAKYSCEQ-CKVVATDKSDIITH-ILEVHIPEDEMEDNRLQDHVSQLLRLECFYCSMK 2254
[Close]
BLAST of EMLSAG00000006239 vs. C. finmarchicus
Match: gi|592883857|gb|GAXK01074518.1| (TSA: Calanus finmarchicus comp501100_c1_seq1 transcribed RNA sequence)

HSP 1 Score: 35.039 bits (79), Expect = 1.173e-1
Identity = 38/135 (28.15%), Postives = 63/135 (46.67%), Query Frame = 0 
Query:   51 ETCGVCNTTCKDYNGIC------FNEDSQXTINSNLLYECPKTCAKCDLCED------LIDSSICETR-LSECAL-KKMKYACRKSCKYCKDACNDVGSHDFCDVHVRRGDCEKN---ETVKRMCRKSCELCEIE 168
             +C +C  T K    I        NE+    I +NLLYE    CA+CD   +       +D  I E++ L+E  L ++ KY+C + CK      +D+ +H   +VH+   + E N   + V ++ R  C  C ++
Sbjct: 1868 HSCKMCRFTAKHQYEIVKHIKSKHNEEDPGIILNNLLYE----CAECDFVAEKGIFLVHVDKHITESKPLTEQVLEEQAKYSCEQ-CKVVATDKSDIITH-ILEVHIPEDEMEDNRLQDHVSQLLRLECFYCSMK 2254
[Close]
BLAST of EMLSAG00000006239 vs. L. salmonis peptides
Match: EMLSAP00000006239 (pep:novel supercontig:LSalAtl2s:LSalAtl2s3409:1295:2068:-1 gene:EMLSAG00000006239 transcript:EMLSAT00000006239 description:"maker-LSalAtl2s3409-augustus-gene-0.1")

HSP 1 Score: 338.576 bits (867), Expect = 9.987e-120
Identity = 170/170 (100.00%), Postives = 170/170 (100.00%), Query Frame = 0 
Query:    1 MKSKYLVLIACFFRGINGIVLEMECLDDSKRSCEGKENQCFEPYQQYTCPETCGVCNTTCKDYNGICFNEDSQXTINSNLLYECPKTCAKCDLCEDLIDSSICETRLSECALKKMKYACRKSCKYCKDACNDVGSHDFCDVHVRRGDCEKNETVKRMCRKSCELCEIEQS 170
            MKSKYLVLIACFFRGINGIVLEMECLDDSKRSCEGKENQCFEPYQQYTCPETCGVCNTTCKDYNGICFNEDSQXTINSNLLYECPKTCAKCDLCEDLIDSSICETRLSECALKKMKYACRKSCKYCKDACNDVGSHDFCDVHVRRGDCEKNETVKRMCRKSCELCEIEQS
Sbjct:    1 MKSKYLVLIACFFRGINGIVLEMECLDDSKRSCEGKENQCFEPYQQYTCPETCGVCNTTCKDYNGICFNEDSQXTINSNLLYECPKTCAKCDLCEDLIDSSICETRLSECALKKMKYACRKSCKYCKDACNDVGSHDFCDVHVRRGDCEKNETVKRMCRKSCELCEIEQS 170
[Close]
BLAST of EMLSAG00000006239 vs. L. salmonis peptides
Match: EMLSAP00000010899 (pep:novel supercontig:LSalAtl2s:LSalAtl2s726:81215:81971:1 gene:EMLSAG00000010899 transcript:EMLSAT00000010899 description:"maker-LSalAtl2s726-augustus-gene-0.5")

HSP 1 Score: 202.601 bits (514), Expect = 3.609e-66
Identity = 97/169 (57.40%), Postives = 124/169 (73.37%), Query Frame = 0 
Query:    1 MKSKYLVLIACFFRGINGIVLEMECLDDSKRSCEGKENQCFEPYQQYTCPETCGVCNTTCKDYNGICFNEDSQXTINSNLLYECPKTCAKCDLCEDLIDSSICETRLSECALKKMKYACRKSCKYCKDACNDVGSHDFCDVHVRRGDCEKNETVKRMCRKSCELCEIEQ 169
            M S YLVL+ACFF+GING +   EC+DDS++SC+ +E++CF P  Q++CP+TCGVCN  CKDY G C  E+ Q   N     ECPKTCAKCD+CEDLID++IC   L +C    M+YACRK+C YC D+CNDVGS DFC++    G CE NE VK+MC+K+C +CE EQ
Sbjct:    1 MNSFYLVLMACFFQGINGKISATECVDDSEQSCKSQESRCFIPSVQFSCPQTCGVCNARCKDYKGDCSVEEMQCGYNLTFPIECPKTCAKCDVCEDLIDTAICMESLDDCTNAYMRYACRKTCLYCIDSCNDVGSEDFCNIQKLSGSCENNEVVKKMCKKTCNICEFEQ 169
[Close]
BLAST of EMLSAG00000006239 vs. L. salmonis peptides
Match: EMLSAP00000010892 (pep:novel supercontig:LSalAtl2s:LSalAtl2s726:17362:18120:-1 gene:EMLSAG00000010892 transcript:EMLSAT00000010892 description:"maker-LSalAtl2s726-augustus-gene-0.6")

HSP 1 Score: 193.356 bits (490), Expect = 1.143e-62
Identity = 96/169 (56.80%), Postives = 119/169 (70.41%), Query Frame = 0 
Query:    1 MKSKYLVLIACFFRGINGIVLEMECLDDSKRSCEGKENQCFEPYQQYTCPETCGVCNTTCKDYNGICFNEDSQXTINSNLLYECPKTCAKCDLCEDLIDSSICETRLSECALKKMKYACRKSCKYCKDACNDVGSHDFCDVHVRRGDCEKNETVKRMCRKSCELCEIEQ 169
            MKS YLVLIACF +GING   + EC DDS+  CE +E++CF P  Q+ CP+TC VC   CKDYN  C+ E+ Q   N  +  ECPKTCA CD+CEDLID+SIC+T L +C    M+YACRK+C YC D CN+VG+ DFC +H     CEKN+  K+MCRKSC  CE+EQ
Sbjct:    1 MKSFYLVLIACFIQGINGKKYDTECEDDSQHVCENQESRCFIPSVQFNCPKTCSVCEAQCKDYNDNCYQENFQCGNNVTISNECPKTCATCDVCEDLIDTSICQTSLKDCHNNYMRYACRKTCLYCLDPCNNVGNDDFCKLHTTNRICEKNDVFKKMCRKSCNFCELEQ 169
[Close]
BLAST of EMLSAG00000006239 vs. L. salmonis peptides
Match: EMLSAP00000010898 (pep:novel supercontig:LSalAtl2s:LSalAtl2s726:28203:28961:-1 gene:EMLSAG00000010898 transcript:EMLSAT00000010898 description:"maker-LSalAtl2s726-augustus-gene-0.7")

HSP 1 Score: 187.578 bits (475), Expect = 1.969e-60
Identity = 90/169 (53.25%), Postives = 117/169 (69.23%), Query Frame = 0 
Query:    1 MKSKYLVLIACFFRGINGIVLEMECLDDSKRSCEGKENQCFEPYQQYTCPETCGVCNTTCKDYNGICFNEDSQXTINSNLLYECPKTCAKCDLCEDLIDSSICETRLSECALKKMKYACRKSCKYCKDACNDVGSHDFCDVHVRRGDCEKNETVKRMCRKSCELCEIEQ 169
            M S YLV+IA FF+GING + E EC+DDS++ C+ +E  C+ P  Q++CP+TCG+C   CKDYNG C  E  Q   N  L+ ECPKTCA CD+CEDLID+S+C   LS+C    M+YACRK+C YC+D CND G+  FC  HV  G C  N   +RMC++SC +C+ EQ
Sbjct:    1 MNSFYLVIIANFFQGINGKITETECVDDSEQVCQRQEGSCYIPSFQFSCPQTCGICKAKCKDYNGDCALEYMQCGFNETLVSECPKTCATCDVCEDLIDTSLCVEGLSDCLNTYMRYACRKTCLYCEDPCNDAGNDSFCKSHVSGGTCTSNAAARRMCKESCRICDPEQ 169
[Close]
BLAST of EMLSAG00000006239 vs. L. salmonis peptides
Match: EMLSAP00000007568 (pep:novel supercontig:LSalAtl2s:LSalAtl2s4372:5191:5850:1 gene:EMLSAG00000007568 transcript:EMLSAT00000007568 description:"maker-LSalAtl2s4372-snap-gene-0.1")

HSP 1 Score: 176.792 bits (447), Expect = 1.306e-56
Identity = 86/132 (65.15%), Postives = 102/132 (77.27%), Query Frame = 0 
Query:   24 ECLDDSKRSCEGKENQCFEPYQQYTCPETCGVCNTTCKDYNGICFNEDSQXTINSNLLYECPKTCAKCDLCEDLIDSSICETRLSECALKKMKYACRKSCKYCKDACNDVGSHDFCDVHVRRGDCEKNETVK 155
            +CLD  + +C   ++QCF+   Q+ CP+TCGVCN  CKDYN  C  E+S   +N+N L ECPKTCAKCD+CEDLIDSSICET+LSECA  +MKYACRKSCK+C+D CNDVGSHD C  HVRRGDCEKN   K
Sbjct:    2 DCLDSPESNCRSXKDQCFDSSIQFVCPQTCGVCNAICKDYNSNCLTEESXCILNNNXLDECPKTCAKCDVCEDLIDSSICETKLSECAQNQMKYACRKSCKHCEDKCNDVGSHDLCSEHVRRGDCEKNXNCK 133
[Close]
BLAST of EMLSAG00000006239 vs. L. salmonis peptides
Match: EMLSAP00000003163 (pep:novel supercontig:LSalAtl2s:LSalAtl2s1767:48381:49134:-1 gene:EMLSAG00000003163 transcript:EMLSAT00000003163 description:"maker-LSalAtl2s1767-snap-gene-0.4")

HSP 1 Score: 167.162 bits (422), Expect = 1.883e-52
Identity = 86/168 (51.19%), Postives = 108/168 (64.29%), Query Frame = 0 
Query:    1 MKSKYLVLIACFFRGINGIVLEMECLDDSKRSCEGKENQCFEPYQQYTCPETCGVCNTTCKDYNGICFNEDSQXTINSNLLYECPKTCAKCDLCEDLIDSSICETRLSECALKKMKYACRKSCKYCKDACNDVGSHDFCDVHVRRGDCEKNETVKRMCRKSCELCEIE 168
            M S +LVLIA F +GING + + EC+DDS+  C+ +E  C+ P  Q+ CP TCGVC   CKDY   C  E+ Q   +     ECPKTCA CD+CEDLID  IC   LS+C  K M+YACRK+C YC D  NDVG+  FC +H   G CE NE V  MC+K+C +C+ E
Sbjct:    1 MNSFHLVLIAFFLQGINGKITDTECVDDSETLCQRQEGSCYIPSIQHRCPVTCGVCKAKCKDYKDDCPLENEQCDYDETFQTECPKTCATCDVCEDLIDPLICNEGLSDCHHKYMRYACRKTCLYCMDPYNDVGNGAFCKMHKISGSCENNEVVIHMCKKTCNICDEE 168
[Close]
BLAST of EMLSAG00000006239 vs. L. salmonis peptides
Match: EMLSAP00000003732 (pep:novel supercontig:LSalAtl2s:LSalAtl2s2000:16746:17193:1 gene:EMLSAG00000003732 transcript:EMLSAT00000003732 description:"maker-LSalAtl2s2000-augustus-gene-0.2")

HSP 1 Score: 115.931 bits (289), Expect = 2.724e-33
Identity = 62/110 (56.36%), Postives = 73/110 (66.36%), Query Frame = 0 
Query:   60 CKDYNGICFNEDSQXTINSNLLYECPKTCAKCDLCEDLIDSSICETRLSECALKKMKYACRKSCKYCKDACNDVGSHDFCDVHVRRGDCEKNETVKRMCRKSCELCEIEQ 169
            CKDY   C+ E SQ   N  +  EC KTCAK D+CEDLID+SICE  L +C    MKYACRK+C YC D CNDVG+ DFC +H   G  + NE  K +CRKSC  CEI+Q
Sbjct:    2 CKDYINNCYGEFSQCGSNETISKECLKTCAKXDVCEDLIDTSICEKSLKDCNNNYMKYACRKTCLYCLDPCNDVGNADFCKIHKDNGAFKSNEAFKIICRKSCNFCEIKQ 111
[Close]
BLAST of EMLSAG00000006239 vs. L. salmonis peptides
Match: EMLSAP00000005974 (pep:novel supercontig:LSalAtl2s:LSalAtl2s322:1175:2268:1 gene:EMLSAG00000005974 transcript:EMLSAT00000005974 description:"maker-LSalAtl2s322-augustus-gene-0.11")

HSP 1 Score: 89.7373 bits (221), Expect = 5.147e-23
Identity = 52/128 (40.62%), Postives = 73/128 (57.03%), Query Frame = 0 
Query:   46 QYTCPETCGVCNTTCKDYNGICFNEDSQXTINSNLLYECPKTCAKCDLCEDLIDSSICETRLSECAL-KKMKYACRKSCKYCKDACNDVGSHD-FCDVHVRRGDCEKNET---VKRMCRKSCELCEIE 168
            Q+ CPE CGVC  +C+D    C  E S+  +  ++  +CPK+CA CD CEDLI+S +C      C     ++YACRK+C  C D+CND   H+  C      G CEK+ T   + R CR++C  C +E
Sbjct:    9 QWMCPEQCGVCQASCRDTGASCL-EHSESCLQKSIEKQCPKSCASCDDCEDLINSDLCSGYKHRCGEDTSVQYACRKTCGLCDDSCNDASVHESLCYKFENNGYCEKSNTMDFMNRACRRTCGFCFLE 135
[Close]
BLAST of EMLSAG00000006239 vs. L. salmonis peptides
Match: EMLSAP00000005975 (pep:novel supercontig:LSalAtl2s:LSalAtl2s322:19068:19805:-1 gene:EMLSAG00000005975 transcript:EMLSAT00000005975 description:"maker-LSalAtl2s322-augustus-gene-0.10")

HSP 1 Score: 88.5817 bits (218), Expect = 3.216e-22
Identity = 58/165 (35.15%), Postives = 81/165 (49.09%), Query Frame = 0 
Query:    1 MKSKY--LVLIACFFRGINGIVLEMECLDDSKRSC----EGKENQCFEPYQQYTCPETCGVCNTTCKDYNGICFNEDSQXTINSNLLYECPKTCAKCDLCEDLIDSSICETRLSECALK-KMKYACRKSCKYCKDACNDVGSHD-FCDVHVRRGDCEKNETVKRM 157
            M + Y  L+ + C      G++ E EC  +S  +C    E  +  C  P  Q+TCPE CGVC   CKD+   CF+  S   + S++   CPK+CA CD CED+I   +CE     C     + YACR++C  C D CND    +  C +   RG C     +  M
Sbjct:    1 MATPYISLLFLLCCAYSAFGLITEFEC-RNSYHNCRDLVETTDRACLIPSYQWTCPEDCGVCRARCKDFFAGCFDS-SSLCLQSHMQKHCPKSCASCDECEDIISPRLCEQYRGRCKTDISVIYACRETCGLCDDDCNDAFVQESMCTIFESRGYCNDPININFM 163
[Close]
BLAST of EMLSAG00000006239 vs. L. salmonis peptides
Match: EMLSAP00000003852 (pep:novel supercontig:LSalAtl2s:LSalAtl2s20944:213:495:-1 gene:EMLSAG00000003852 transcript:EMLSAT00000003852 description:"maker-LSalAtl2s20944-snap-gene-0.2")

HSP 1 Score: 84.7297 bits (208), Expect = 7.123e-22
Identity = 40/54 (74.07%), Postives = 44/54 (81.48%), Query Frame = 0 
Query:  115 MKYACRKSCKYCKDACNDVGSHDFCDVHVRRGDCEKNETVKRMCRKSCELCEIE 168
            MKY CRKSCKYC+D CNDV S + C  HV RGDCE NE VKRMC+KSCELCE+E
Sbjct:    1 MKYVCRKSCKYCEDTCNDVASDELCKSHVSRGDCENNEVVKRMCKKSCELCEVE 54
[Close]
BLAST of EMLSAG00000006239 vs. nr
Match: gi|225712722|gb|ACO12207.1| (ZK643.6 precursor [Lepeophtheirus salmonis])

HSP 1 Score: 219.935 bits (559), Expect = 1.006e-70
Identity = 110/165 (66.67%), Postives = 122/165 (73.94%), Query Frame = 0 
Query:    1 MKSKYLVLIACFFRGINGIVLEMECLDDSKRSCEGKENQCFEPYQQYTCPETCGVCNTTCKDYNGICFNEDSQXTINSNLLYECPKTCAKCDLCEDLIDSSICETRLSECALKKMKYACRKSCKYCKDACNDVGSHDFCDVHVRRGDCEKNETVKRMCRKSCELC 165
            MKS YLVLIACFF+GING++    C+D+SK  C   + QC +P   YTCPETCGVC   CKDYN  CFNEDSQ TIN NL   CPKTCA CD CEDLIDSSICE + S+CA   MKY CRKSCKYC+D CNDV S + C  HV RGDC  NE VKRMC+KSCELC
Sbjct:    1 MKSLYLVLIACFFQGINGLISNTLCVDNSKSVCNSLQGQCNQPSILYTCPETCGVCKAICKDYNANCFNEDSQCTINKNLSNTCPKTCATCDECEDLIDSSICENKKSDCAEDNMKYVCRKSCKYCEDTCNDVASDELCKSHVSRGDCGNNEAVKRMCKKSCELC 165
[Close]
BLAST of EMLSAG00000006239 vs. nr
Match: gi|290462093|gb|ADD24094.1| (protein ZK643.6 [Lepeophtheirus salmonis])

HSP 1 Score: 65.0846 bits (157), Expect = 3.820e-10
Identity = 46/171 (26.90%), Postives = 85/171 (49.71%), Query Frame = 0 
Query:    1 MKSKYLVLIACFFRGINGIVLEMECLDDSKRSCEGKENQCFEPYQQYTCPETCGVCNTTCKDYNGICFNEDSQXTINSNLLYECPKTCAKCDLCEDLIDSSICETRLSECALKKMKYACRKSCKYCKDACND-VGSHDFCDVHVRRGDCEK----NETVKRMCRKSCELCE 166
            M ++ L++I+ F   +NG        ++   SCE    +C  P   + C ++CG C + C D +  C N  ++  ++ +   EC + C  CD CEDL++  +C    + C    ++Y C  +C+ C+ +C D +  +  C    + G C++    N  +K  C+K+C LC+
Sbjct:    1 MINRVLIIISFFLVVVNG--QGNSTCENEMESCETNTFKCMNPEYYFKCKKSCG-CESACTDTSIKCINNPNK-CLDRDQRLECQRACGNCDRCEDLLEHIMCNQLKNLCNNGNVRYFCPATCRLCEKSCRDNLPYNRVCHNFKKSGFCDRKSIYNRFMKSACQKTCNLCK 167
The following BLAST results are available for this feature:
BLAST of EMLSAG00000006239 vs. GO
Analysis Date: 2014-04-02 (Blast vs. GO)
Total hits: 0
Match NameE-valueIdentityDescription
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BLAST of EMLSAG00000006239 vs. C. finmarchicus
Analysis Date: 2014-05-09 (TblastN vs C. finmarchicus TSA)
Total hits: 4
Match NameE-valueIdentityDescription
gi|592867996|gb|GAXK01089566.1|1.010e-337.10TSA: Calanus finmarchicus comp421231_c0_seq2 trans... [more]
gi|592867997|gb|GAXK01089565.1|1.087e-337.10TSA: Calanus finmarchicus comp421231_c0_seq1 trans... [more]
gi|592883856|gb|GAXK01074519.1|8.407e-228.15TSA: Calanus finmarchicus comp501100_c1_seq2 trans... [more]
gi|592883857|gb|GAXK01074518.1|1.173e-128.15TSA: Calanus finmarchicus comp501100_c1_seq1 trans... [more]
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BLAST of EMLSAG00000006239 vs. L. salmonis peptides
Analysis Date: 2014-05-10 (Blastp vs. self)
Total hits: 25
Match NameE-valueIdentityDescription
EMLSAP000000062399.987e-120100.00pep:novel supercontig:LSalAtl2s:LSalAtl2s3409:1295... [more]
EMLSAP000000108993.609e-6657.40pep:novel supercontig:LSalAtl2s:LSalAtl2s726:81215... [more]
EMLSAP000000108921.143e-6256.80pep:novel supercontig:LSalAtl2s:LSalAtl2s726:17362... [more]
EMLSAP000000108981.969e-6053.25pep:novel supercontig:LSalAtl2s:LSalAtl2s726:28203... [more]
EMLSAP000000075681.306e-5665.15pep:novel supercontig:LSalAtl2s:LSalAtl2s4372:5191... [more]
EMLSAP000000031631.883e-5251.19pep:novel supercontig:LSalAtl2s:LSalAtl2s1767:4838... [more]
EMLSAP000000037322.724e-3356.36pep:novel supercontig:LSalAtl2s:LSalAtl2s2000:1674... [more]
EMLSAP000000059745.147e-2340.63pep:novel supercontig:LSalAtl2s:LSalAtl2s322:1175:... [more]
EMLSAP000000059753.216e-2235.15pep:novel supercontig:LSalAtl2s:LSalAtl2s322:19068... [more]
EMLSAP000000038527.123e-2274.07pep:novel supercontig:LSalAtl2s:LSalAtl2s20944:213... [more]

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BLAST of EMLSAG00000006239 vs. SwissProt
Analysis Date: 2017-02-10 (Blastp vs. SwissProt)
Total hits: 0
Match NameE-valueIdentityDescription
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BLAST of EMLSAG00000006239 vs. Select Arthropod Genomes
Analysis Date: 2017-02-20 (Blastp vs. Selected Arthropods)
Total hits: 0
Match NameE-valueIdentityDescription
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BLAST of EMLSAG00000006239 vs. nr
Analysis Date: 2017-02-20 (Blastp vs. NR (2/2017))
Total hits: 2
Match NameE-valueIdentityDescription
gi|225712722|gb|ACO12207.1|1.006e-7066.67ZK643.6 precursor [Lepeophtheirus salmonis][more]
gi|290462093|gb|ADD24094.1|3.820e-1026.90protein ZK643.6 [Lepeophtheirus salmonis][more]
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BLAST of EMLSAG00000006239 vs. Tigriopus kingsejongenis genes
Analysis Date: 2018-04-18 (Blastp vs. Tigriopus kingsejongensis proteins)
Total hits: 0
Match NameE-valueIdentityDescription
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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
LSalAtl2s3409supercontigLSalAtl2s3409:1295..2068 -
Analyses
This gene is derived from or has results from the following analyses
Analysis NameDate Performed
ensembl2013-09-26 .965016
Blast vs. GO2014-04-02
TblastN vs C. finmarchicus TSA2014-05-09
Blastp vs. self2014-05-10
Blastp vs. SwissProt2017-02-10
Blastp vs. Selected Arthropods2017-02-20
Blastp vs. NR (2/2017)2017-02-20
Blastp vs. Tigriopus kingsejongensis proteins2018-04-18
Properties
Property NameValue
Logic nameensemblgenomes
Descriptionmaker-LSalAtl2s3409-augustus-gene-0.1
Biotypeprotein_coding
EvidenceIEA
NoteZK643.6 precursor [Lepeophtheirus salmonis]
Cross References
External references for this gene
DatabaseAccession
Ensembl Metazoa (gene)EMLSAG00000006239 (primary cross-reference)
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameSpeciesType
EMLSAT00000006239EMLSAT00000006239-702086Lepeophtheirus salmonismRNA


Sequences
The following sequences are available for this feature:

gene from alignment at LSalAtl2s3409:1295..2068-

Legend: mRNA
Hold the cursor over a type above to highlight its positions in the sequence below.
>EMLSAG00000006239-689005 ID=EMLSAG00000006239-689005|Name=EMLSAG00000006239|organism=Lepeophtheirus salmonis|type=gene|length=774bp|location=Sequence derived from alignment at LSalAtl2s3409:1295..2068- (Lepeophtheirus salmonis)
ATGAAATCCAAATATTTAGTTTTAATTGCATGTTTTTTCCGAGGAATTAA
TGGAATAGTGTTAGGTAAATTTGTATTATTTTAAAAATTAAATCATCTGT
AACACATATACTTTTTTATAGAGATGGAGTGTTTGGATGATAGTAAAAGA
AGTTGTGAGGGGAAGGAAAATCAATGTTTTGAACCGTATCAACAATATAC
GTGTCCAGAAACTTGTGGGGTATGTAATAGTAAGCTTTGTTCATCAGTAA
AAATATAATAGATAAACTATCTGTGCATATGATATAACTAAATCATTTAC
TATTTCCCTGTATTTTATTTTATTAGCTACATGCAAGGATTATAACGGTA
TTTGCTTTAATGAAGACTCACAATGMACTATAAACAGTAATCTATTGTAT
GAATGCCCAAAAACTTGCGCAAAGTGTGATTGTAAATTTTGATTTACGTA
ATAAGAAAATTGTGGATAATAAAGTATGTATTTTTAGTATGCGAGGATTT
GATCGACTCATCAATTTGTGAAACAAGATTAAGTGAGTGTGCTCTGAAGA
AAATGAAATATGCTTGTAGAAAATCCTGTAAATATTGTAGTAAGTTAACA
ATCTATTTTTGTCGGTGAATATCATTTTATAAATTTTTAGAGGATGCATG
TAATGACGTTGGATCTCATGATTTTTGTGATGTACACGTAAGAAGAGGAG
ATTGTGAAAAAAATGAAACTGTAAAGCGCATGTGTAGAAAATCCTGCGAG
CTNTGTGAAATAGAACAATCTTAG
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