EMLSAG00000005975, EMLSAG00000005975-688741 (gene) Lepeophtheirus salmonis

Overview
NameEMLSAG00000005975
Unique NameEMLSAG00000005975-688741
Typegene
OrganismLepeophtheirus salmonis (salmon louse)
Associated RNAi Experiments

Nothing found

Homology
BLAST of EMLSAG00000005975 vs. C. finmarchicus
Match: gi|592880591|gb|GAXK01077310.1| (TSA: Calanus finmarchicus comp4402501_c0_seq1 transcribed RNA sequence)

HSP 1 Score: 40.817 bits (94), Expect = 6.612e-4
Identity = 32/124 (25.81%), Postives = 54/124 (43.55%), Query Frame = 0
Query:   21 LITEFECRNSYHNCRDLVETTDRACLIPSYQWTCPEDCGVCRA-------RCKDFFAGCFDSSSLCLQSHMQKHCPKSCASC-DECEDIISPRLCEQYRGRCKTDISVI-----YACRETCGLC 131
            L T   C + Y NC +L           S    CP+ CG+C          C + ++ C   +  C Q+ ++K+C KSC +C  +  +  +P  C  Y   C+ + +        +C++TCG C
Sbjct:   76 LTTVKPCFDKYTNCAELARDN-----CYSNGEMCPKSCGLCAGMTPHESNTCYNLWSNCNQLTGYCNQARVKKNCKKSCQACGGDANNEPAPSSCSDYWNNCRENAAYYCPRWPESCKKTCGQC 432          
BLAST of EMLSAG00000005975 vs. C. finmarchicus
Match: gi|592853688|gb|GAXK01103856.1| (TSA: Calanus finmarchicus comp166349_c1_seq1 transcribed RNA sequence)

HSP 1 Score: 31.9574 bits (71), Expect = 9.246e-1
Identity = 15/39 (38.46%), Postives = 21/39 (53.85%), Query Frame = 0
Query:    8 LLFLLCCAYSAFGLITEFECRNSYHNCRDLVETTDRACL 46
            L  LLC  Y+  G+  + E +N+ +N     ETTD  CL
Sbjct: 1464 LAILLCIFYTPIGMKRKSEAQNTEYNQSHFTETTDTVCL 1580          
BLAST of EMLSAG00000005975 vs. C. finmarchicus
Match: gi|592893231|gb|GAXK01065144.1| (TSA: Calanus finmarchicus comp378638_c0_seq1 transcribed RNA sequence)

HSP 1 Score: 29.261 bits (64), Expect = 8.398e+0
Identity = 30/111 (27.03%), Postives = 45/111 (40.54%), Query Frame = 0
Query:    4 PYISLLF--LLCCAYSAFGLITEFECRNSYHNCRDLVETTDRACLIPSYQWTCPEDCGVCRA-------RCKDFFAGCFD-SSSLCLQSHMQKHCPKSCASCDECEDIISP 104
            P+IS +    +  A SA  L T + C + ++NCR   E    AC       +C + C +C          C D F  C D +  +C      K C K+C +C     +  P
Sbjct:  602 PHISTITCERVAGATSAP-LTTAYPCEDKWNNCR---EEWSGACWRQEAVASCEKTCQLCPGMTPLESYTCYDEFNNCRDYAPDVCSDQENNKKCMKTCGTCPANTPVPKP 922          
BLAST of EMLSAG00000005975 vs. C. finmarchicus
Match: gi|592918448|gb|GAXK01039927.1| (TSA: Calanus finmarchicus comp273721_c1_seq1 transcribed RNA sequence)

HSP 1 Score: 28.8758 bits (63), Expect = 8.822e+0
Identity = 20/72 (27.78%), Postives = 29/72 (40.28%), Query Frame = 0
Query:   58 CGVCRARCKDFFAGCFDSSSLCLQSHMQKHCPKSCASCDECEDIISPRLCEQYRGRCKTDISVIYACRETCG 129
            C +C+ +CKD            L+SHM+KH      SC+ C      +L  +  G+      V     E CG
Sbjct:  541 CEICQKQCKD---------GKLLKSHMKKHSTDRPFSCETCGKTFKHKLSLKLHGKSHEGTKVKEFTCEICG 729          
BLAST of EMLSAG00000005975 vs. C. finmarchicus
Match: gi|592910321|gb|GAXK01048054.1| (TSA: Calanus finmarchicus comp1254747_c0_seq1 transcribed RNA sequence)

HSP 1 Score: 28.8758 bits (63), Expect = 9.407e+0
Identity = 17/45 (37.78%), Postives = 24/45 (53.33%), Query Frame = 0
Query:   61 CRARCKDFFAGC---FDSSSLCLQSHMQKHCPKSCASCDECEDII 102
            CRA CKDFF      F    L L  +M++  PKS   CD+  +++
Sbjct:  148 CRANCKDFFCAAWPNFRRIELVLL*NMRRDSPKSRRICDQGYEML 282          
BLAST of EMLSAG00000005975 vs. L. salmonis peptides
Match: EMLSAP00000005975 (pep:novel supercontig:LSalAtl2s:LSalAtl2s322:19068:19805:-1 gene:EMLSAG00000005975 transcript:EMLSAT00000005975 description:"maker-LSalAtl2s322-augustus-gene-0.10")

HSP 1 Score: 340.117 bits (871), Expect = 1.769e-120
Identity = 166/166 (100.00%), Postives = 166/166 (100.00%), Query Frame = 0
Query:    1 MATPYISLLFLLCCAYSAFGLITEFECRNSYHNCRDLVETTDRACLIPSYQWTCPEDCGVCRARCKDFFAGCFDSSSLCLQSHMQKHCPKSCASCDECEDIISPRLCEQYRGRCKTDISVIYACRETCGLCDDDCNDAFVQESMCTIFESRGYCNDPININFMKKA 166
            MATPYISLLFLLCCAYSAFGLITEFECRNSYHNCRDLVETTDRACLIPSYQWTCPEDCGVCRARCKDFFAGCFDSSSLCLQSHMQKHCPKSCASCDECEDIISPRLCEQYRGRCKTDISVIYACRETCGLCDDDCNDAFVQESMCTIFESRGYCNDPININFMKKA
Sbjct:    1 MATPYISLLFLLCCAYSAFGLITEFECRNSYHNCRDLVETTDRACLIPSYQWTCPEDCGVCRARCKDFFAGCFDSSSLCLQSHMQKHCPKSCASCDECEDIISPRLCEQYRGRCKTDISVIYACRETCGLCDDDCNDAFVQESMCTIFESRGYCNDPININFMKKA 166          
BLAST of EMLSAG00000005975 vs. L. salmonis peptides
Match: EMLSAP00000005974 (pep:novel supercontig:LSalAtl2s:LSalAtl2s322:1175:2268:1 gene:EMLSAG00000005974 transcript:EMLSAT00000005974 description:"maker-LSalAtl2s322-augustus-gene-0.11")

HSP 1 Score: 141.354 bits (355), Expect = 8.417e-43
Identity = 67/116 (57.76%), Postives = 82/116 (70.69%), Query Frame = 0
Query:   51 QWTCPEDCGVCRARCKDFFAGCFDSSSLCLQSHMQKHCPKSCASCDECEDIISPRLCEQYRGRCKTDISVIYACRETCGLCDDDCNDAFVQESMCTIFESRGYCNDPININFMKKA 166
            QW CPE CGVC+A C+D  A C + S  CLQ  ++K CPKSCASCD+CED+I+  LC  Y+ RC  D SV YACR+TCGLCDD CNDA V ES+C  FE+ GYC     ++FM +A
Sbjct:    9 QWMCPEQCGVCQASCRDTGASCLEHSESCLQKSIEKQCPKSCASCDDCEDLINSDLCSGYKHRCGEDTSVQYACRKTCGLCDDSCNDASVHESLCYKFENNGYCEKSNTMDFMNRA 124          
BLAST of EMLSAG00000005975 vs. L. salmonis peptides
Match: EMLSAP00000006643 (pep:novel supercontig:LSalAtl2s:LSalAtl2s3671:6789:7712:-1 gene:EMLSAG00000006643 transcript:EMLSAT00000006643 description:"maker-LSalAtl2s3671-snap-gene-0.3")

HSP 1 Score: 117.087 bits (292), Expect = 1.190e-32
Identity = 59/159 (37.11%), Postives = 94/159 (59.12%), Query Frame = 0
Query:    1 MATPYISLLFLL--CCAYSAFGLITEFECRNSYHN-CRDLVETTDRACLIPSYQWTCPEDCGVCRARCKDFFAGCF-DSSSLCLQSHMQKHCPKSCASCDECEDIISPRLCEQYRGRCKTDISVIYACRETCGLCDDDCNDAFVQESMCTIFESRGYCN 155
            M T  + +L LL  C  +  FG+++   C ++    C   + ++  +C   ++Q+TCP+ CG+C A+C+D    C+ DS   C +  +   CPKSCA CDECED+IS   CE  + RC TD SV Y+CR+ C LC  +CN+A+  +++C  +++R   N
Sbjct:   50 METNRVLILHLLSFCLFHQCFGILSNTTCEDTDETYCHSSIGSSKESCFDAAFQYTCPKSCGICDAKCRDNNGACYRDSIEECFEPQIANECPKSCAGCDECEDLISIEFCESIKNRCSTDASVQYSCRKXCHLCKSNCNNAYYDDTVCEEYQARDMMN 208          
BLAST of EMLSAG00000005975 vs. L. salmonis peptides
Match: EMLSAP00000003839 (pep:novel supercontig:LSalAtl2s:LSalAtl2s2089:76:636:1 gene:EMLSAG00000003839 transcript:EMLSAT00000003839 description:"augustus_masked-LSalAtl2s2089-processed-gene-0.0")

HSP 1 Score: 96.2857 bits (238), Expect = 1.160e-25
Identity = 46/104 (44.23%), Postives = 65/104 (62.50%), Query Frame = 0
Query:   63 ARCKDFFAGCF-DSSSLCLQSHMQKHCPKSCASCDECEDIISPRLCEQYRGRCKTDISVIYACRETCGLCDDDCNDAFVQESMCTIFESRGYCNDPININFMKK 165
            A+C+D    C+ D    C   H+ K CPK+CA CDECED+IS   CE Y+ RC TD  + Y+CR+TCGLC  DCN+A+  +++C  +++R  C D      MK+
Sbjct:    5 AKCRDNNGACYRDGVEECFLPHIAKDCPKTCAGCDECEDLISIEFCELYQNRCNTDTPIRYSCRKTCGLCKSDCNNAYYDDAVCEEYKARNTCEDVFRSTKMKE 108          
BLAST of EMLSAG00000005975 vs. L. salmonis peptides
Match: EMLSAP00000002186 (pep:novel supercontig:LSalAtl2s:LSalAtl2s1400:29785:30148:-1 gene:EMLSAG00000002186 transcript:EMLSAT00000002186 description:"maker-LSalAtl2s1400-augustus-gene-0.1")

HSP 1 Score: 94.3597 bits (233), Expect = 2.484e-25
Identity = 46/78 (58.97%), Postives = 56/78 (71.79%), Query Frame = 0
Query:   54 CPEDCGVCRARCKDFFAGCFDSSSLCLQSHMQKHCPKSCASCDECEDIISPRLCEQYRGRCKTDISVIYACRETCGLC 131
            CPE CGVC+A C+D  A C + S  CLQ  ++K CPKSCASCD+CED+I+  LC  Y  RC+ D SV YACR+TC LC
Sbjct:    2 CPEQCGVCQASCRDTGASCLEHSESCLQKSIEKQCPKSCASCDDCEDLINSDLCSGYTHRCEEDTSVQYACRKTCELC 79          
BLAST of EMLSAG00000005975 vs. L. salmonis peptides
Match: EMLSAP00000006239 (pep:novel supercontig:LSalAtl2s:LSalAtl2s3409:1295:2068:-1 gene:EMLSAG00000006239 transcript:EMLSAT00000006239 description:"maker-LSalAtl2s3409-augustus-gene-0.1")

HSP 1 Score: 88.5817 bits (218), Expect = 3.140e-22
Identity = 58/165 (35.15%), Postives = 81/165 (49.09%), Query Frame = 0
Query:    1 MATPYISLLFLLCCAYSAFGLITEFEC-RNSYHNCRDLVETTDRACLIPSYQWTCPEDCGVCRARCKDFFAGCFDS-SSLCLQSHMQKHCPKSCASCDECEDIISPRLCEQYRGRCKTDISVIYACRETCGLCDDDCNDAFVQESMCTIFESRGYCNDPININFM 163
            M + Y  L+ + C      G++ E EC  +S  +C    E  +  C  P  Q+TCPE CGVC   CKD+   CF+  S   + S++   CPK+CA CD CED+I   +CE     C     + YACR++C  C D CND    +  C +   RG C     +  M
Sbjct:    1 MKSKY--LVLIACFFRGINGIVLEMECLDDSKRSC----EGKENQCFEPYQQYTCPETCGVCNTTCKDYNGICFNEDSQXTINSNLLYECPKTCAKCDLCEDLIDSSICETRLSECALK-KMKYACRKSCKYCKDACNDVGSHD-FCDVHVRRGDCEKNETVKRM 157          
BLAST of EMLSAG00000005975 vs. L. salmonis peptides
Match: EMLSAP00000010898 (pep:novel supercontig:LSalAtl2s:LSalAtl2s726:28203:28961:-1 gene:EMLSAG00000010898 transcript:EMLSAT00000010898 description:"maker-LSalAtl2s726-augustus-gene-0.7")

HSP 1 Score: 87.0409 bits (214), Expect = 1.271e-21
Identity = 53/136 (38.97%), Postives = 76/136 (55.88%), Query Frame = 0
Query:   20 GLITEFECRNSYHNCRDLVETTDRACLIPSYQWTCPEDCGVCRARCKDFFAGCFDSSSLC-LQSHMQKHCPKSCASCDECEDIISPRLCEQYRGRCKTDISVIYACRETCGLCDDDCNDAFVQESMCTIFESRGYC 154
            G ITE EC +       + +  + +C IPS+Q++CP+ CG+C+A+CKD+   C      C     +   CPK+CA+CD CED+I   LC +    C  +  + YACR+TC  C+D CNDA   +S C    S G C
Sbjct:   18 GKITETECVDDSEQ---VCQRQEGSCYIPSFQFSCPQTCGICKAKCKDYNGDCALEYMQCGFNETLVSECPKTCATCDVCEDLIDTSLCVEGLSDC-LNTYMRYACRKTCLYCEDPCNDAG-NDSFCKSHVSGGTC 148          
BLAST of EMLSAG00000005975 vs. L. salmonis peptides
Match: EMLSAP00000012209 (pep:novel supercontig:LSalAtl2s:LSalAtl2s8853:989:1792:-1 gene:EMLSAG00000012209 transcript:EMLSAT00000012209 description:"maker-LSalAtl2s8853-snap-gene-0.3")

HSP 1 Score: 84.3445 bits (207), Expect = 7.145e-21
Identity = 40/91 (43.96%), Postives = 57/91 (62.64%), Query Frame = 0
Query:   75 SSSLCLQSHMQKHCPKSCASCDECEDIISPRLCEQYRGRCKTDISVIYACRETCGLCDDDCNDAFVQESMCTIFESRGYCNDPININFMKK 165
            S   C  +  Q  CPKSC  CDECED+IS   CE  + RC TD SV Y+CR+TC LC  +CN+A+  +++C  +++R  C+D +    MK+
Sbjct:   44 SKESCFDAAFQYTCPKSCGICDECEDLISIEFCESIKNRCNTDASVRYSCRKTCDLCKSNCNNAYYDDTVCEEYQARETCDDELRSTKMKE 134          
BLAST of EMLSAG00000005975 vs. L. salmonis peptides
Match: EMLSAP00000010899 (pep:novel supercontig:LSalAtl2s:LSalAtl2s726:81215:81971:1 gene:EMLSAG00000010899 transcript:EMLSAT00000010899 description:"maker-LSalAtl2s726-augustus-gene-0.5")

HSP 1 Score: 82.4185 bits (202), Expect = 5.899e-20
Identity = 59/160 (36.88%), Postives = 81/160 (50.62%), Query Frame = 0
Query:    9 LFLLCCAYSAF-GLITEFEC-RNSYHNCRDLVETTDRACLIPSYQWTCPEDCGVCRARCKDFFAGCFDSSSLC-LQSHMQKHCPKSCASCDECEDIISPRLCEQYRGRCKTDISVIYACRETCGLCDDDCNDAFVQESMCTIFESRGYCNDPININFMKK 165
            L L+ C +    G I+  EC  +S  +C+    + +  C IPS Q++CP+ CGVC ARCKD+   C      C         CPK+CA CD CED+I   +C +    C T+  + YACR+TC  C D CND    E  C I +  G C +   +  M K
Sbjct:    6 LVLMACFFQGINGKISATECVDDSEQSCK----SQESRCFIPSVQFSCPQTCGVCNARCKDYKGDCSVEEMQCGYNLTFPIECPKTCAKCDVCEDLIDTAICMESLDDC-TNAYMRYACRKTCLYCIDSCNDVG-SEDFCNIQKLSGSCENNEVVKKMCK 159          
BLAST of EMLSAG00000005975 vs. L. salmonis peptides
Match: EMLSAP00000007568 (pep:novel supercontig:LSalAtl2s:LSalAtl2s4372:5191:5850:1 gene:EMLSAG00000007568 transcript:EMLSAT00000007568 description:"maker-LSalAtl2s4372-snap-gene-0.1")

HSP 1 Score: 79.7221 bits (195), Expect = 3.105e-19
Identity = 46/116 (39.66%), Postives = 63/116 (54.31%), Query Frame = 0
Query:   45 CLIPSYQWTCPEDCGVCRARCKDFFAGCFDSSSLC-LQSHMQKHCPKSCASCDECEDIISPRLCEQYRGRCKTDISVIYACRETCGLCDDDCNDAFVQESMCTIFESRGYCNDPIN 159
            C   S Q+ CP+ CGVC A CKD+ + C    S C L ++    CPK+CA CD CED+I   +CE     C  +  + YACR++C  C+D CND    + +C+    RG C    N
Sbjct:   18 CFDSSIQFVCPQTCGVCNAICKDYNSNCLTEESXCILNNNXLDECPKTCAKCDVCEDLIDSSICETKLSECAQN-QMKYACRKSCKHCEDKCNDVGSHD-LCSEHVRRGDCEKNXN 131          
BLAST of EMLSAG00000005975 vs. nr
Match: gi|225712722|gb|ACO12207.1| (ZK643.6 precursor [Lepeophtheirus salmonis])

HSP 1 Score: 101.679 bits (252), Expect = 2.235e-24
Identity = 60/157 (38.22%), Postives = 86/157 (54.78%), Query Frame = 0
Query:    9 LFLLCCAYSAF-GLITEFECRNSYHNCRDLVETTDRACLIPSYQWTCPEDCGVCRARCKDFFAGCFDSSSLC-LQSHMQKHCPKSCASCDECEDIISPRLCEQYRGRCKTDISVIYACRETCGLCDDDCNDAFVQESMCTIFESRGYCNDPININFM 163
            L L+ C +    GLI+   C     N + +  +    C  PS  +TCPE CGVC+A CKD+ A CF+  S C +  ++   CPK+CA+CDECED+I   +CE  +  C  D ++ Y CR++C  C+D CND    E +C    SRG C +   +  M
Sbjct:    6 LVLIACFFQGINGLISNTLC---VDNSKSVCNSLQGQCNQPSILYTCPETCGVCKAICKDYNANCFNEDSQCTINKNLSNTCPKTCATCDECEDLIDSSICENKKSDCAED-NMKYVCRKSCKYCEDTCNDVASDE-LCKSHVSRGDCGNNEAVKRM 157          
BLAST of EMLSAG00000005975 vs. nr
Match: gi|290462093|gb|ADD24094.1| (protein ZK643.6 [Lepeophtheirus salmonis])

HSP 1 Score: 71.2478 bits (173), Expect = 1.489e-12
Identity = 45/151 (29.80%), Postives = 72/151 (47.68%), Query Frame = 0
Query:   17 SAFGLITEFECRNSYHNCRDLVETTDRACLIPSYQWTCPEDCGVCRARCKDFFAGCFDSSSLCLQSHMQKHCPKSCASCDECEDIISPRLCEQYRGRCKTDISVIYACRETCGLCDDDCNDAFVQESMCTIFESRGYCN-DPININFMKKA 166
            S F ++   +  ++  N  +  ET    C+ P Y + C + CG C + C D    C ++ + CL    +  C ++C +CD CED++   +C Q +  C    +V Y C  TC LC+  C D      +C  F+  G+C+   I   FMK A
Sbjct:   10 SFFLVVVNGQGNSTCENEMESCETNTFKCMNPEYYFKCKKSCG-CESACTDTSIKCINNPNKCLDRDQRLECQRACGNCDRCEDLLEHIMCNQLKNLCNNG-NVRYFCPATCRLCEKSCRDNLPYNRVCHNFKKSGFCDRKSIYNRFMKSA 158          
The following BLAST results are available for this feature:
BLAST of EMLSAG00000005975 vs. GO
Analysis Date: 2014-04-02 (Blast vs. GO)
Total hits: 0
Match NameE-valueIdentityDescription
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BLAST of EMLSAG00000005975 vs. C. finmarchicus
Analysis Date: 2014-05-09 (TblastN vs C. finmarchicus TSA)
Total hits: 5
Match NameE-valueIdentityDescription
gi|592880591|gb|GAXK01077310.1|6.612e-425.81TSA: Calanus finmarchicus comp4402501_c0_seq1 tran... [more]
gi|592853688|gb|GAXK01103856.1|9.246e-138.46TSA: Calanus finmarchicus comp166349_c1_seq1 trans... [more]
gi|592893231|gb|GAXK01065144.1|8.398e+027.03TSA: Calanus finmarchicus comp378638_c0_seq1 trans... [more]
gi|592918448|gb|GAXK01039927.1|8.822e+027.78TSA: Calanus finmarchicus comp273721_c1_seq1 trans... [more]
gi|592910321|gb|GAXK01048054.1|9.407e+037.78TSA: Calanus finmarchicus comp1254747_c0_seq1 tran... [more]
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BLAST of EMLSAG00000005975 vs. L. salmonis peptides
Analysis Date: 2014-05-10 (Blastp vs. self)
Total hits: 25
Match NameE-valueIdentityDescription
EMLSAP000000059751.769e-120100.00pep:novel supercontig:LSalAtl2s:LSalAtl2s322:19068... [more]
EMLSAP000000059748.417e-4357.76pep:novel supercontig:LSalAtl2s:LSalAtl2s322:1175:... [more]
EMLSAP000000066431.190e-3237.11pep:novel supercontig:LSalAtl2s:LSalAtl2s3671:6789... [more]
EMLSAP000000038391.160e-2544.23pep:novel supercontig:LSalAtl2s:LSalAtl2s2089:76:6... [more]
EMLSAP000000021862.484e-2558.97pep:novel supercontig:LSalAtl2s:LSalAtl2s1400:2978... [more]
EMLSAP000000062393.140e-2235.15pep:novel supercontig:LSalAtl2s:LSalAtl2s3409:1295... [more]
EMLSAP000000108981.271e-2138.97pep:novel supercontig:LSalAtl2s:LSalAtl2s726:28203... [more]
EMLSAP000000122097.145e-2143.96pep:novel supercontig:LSalAtl2s:LSalAtl2s8853:989:... [more]
EMLSAP000000108995.899e-2036.88pep:novel supercontig:LSalAtl2s:LSalAtl2s726:81215... [more]
EMLSAP000000075683.105e-1939.66pep:novel supercontig:LSalAtl2s:LSalAtl2s4372:5191... [more]

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BLAST of EMLSAG00000005975 vs. SwissProt
Analysis Date: 2017-02-10 (Blastp vs. SwissProt)
Total hits: 0
Match NameE-valueIdentityDescription
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BLAST of EMLSAG00000005975 vs. Select Arthropod Genomes
Analysis Date: 2017-02-20 (Blastp vs. Selected Arthropods)
Total hits: 0
Match NameE-valueIdentityDescription
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BLAST of EMLSAG00000005975 vs. nr
Analysis Date: 2017-02-20 (Blastp vs. NR (2/2017))
Total hits: 2
Match NameE-valueIdentityDescription
gi|225712722|gb|ACO12207.1|2.235e-2438.22ZK643.6 precursor [Lepeophtheirus salmonis][more]
gi|290462093|gb|ADD24094.1|1.489e-1229.80protein ZK643.6 [Lepeophtheirus salmonis][more]
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BLAST of EMLSAG00000005975 vs. Tigriopus kingsejongenis genes
Analysis Date: 2018-04-18 (Blastp vs. Tigriopus kingsejongensis proteins)
Total hits: 0
Match NameE-valueIdentityDescription
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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
LSalAtl2s322supercontigLSalAtl2s322:19068..19805 -
Analyses
This gene is derived from or has results from the following analyses
Analysis NameDate Performed
ensembl2013-09-26 .965016
Blast vs. GO2014-04-02
TblastN vs C. finmarchicus TSA2014-05-09
Blastp vs. self2014-05-10
Blastp vs. SwissProt2017-02-10
Blastp vs. Selected Arthropods2017-02-20
Blastp vs. NR (2/2017)2017-02-20
Blastp vs. Tigriopus kingsejongensis proteins2018-04-18
Properties
Property NameValue
Logic nameensemblgenomes
Descriptionmaker-LSalAtl2s322-augustus-gene-0.10
Biotypeprotein_coding
EvidenceIEA
NoteZK643.6 precursor [Lepeophtheirus salmonis]
Cross References
External references for this gene
DatabaseAccession
Ensembl Metazoa (gene)EMLSAG00000005975 (primary cross-reference)
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameSpeciesType
EMLSAT00000005975EMLSAT00000005975-701822Lepeophtheirus salmonismRNA


Sequences
The following sequences are available for this feature:

gene from alignment at LSalAtl2s322:19068..19805-

Legend: mRNA
Hold the cursor over a type above to highlight its positions in the sequence below.
>EMLSAG00000005975-688741 ID=EMLSAG00000005975-688741|Name=EMLSAG00000005975|organism=Lepeophtheirus salmonis|type=gene|length=738bp|location=Sequence derived from alignment at LSalAtl2s322:19068..19805- (Lepeophtheirus salmonis)
ATGGCCACACCATATATTAGTCTTCTCTTTCTACTTTGTTGTGCTTATAG TGCCTTTGGACTAATTACAGGTAAGATATATCATTTTGTCTTTGTTATGA GCATTTTATACTCGTAATTGTTGATCTTTAAGAATTTGAATGTAGAAACA GTTACCATAACTGTAGAGATCTGGTCGAAACTACTGATAGGGCATGTCTT ATTCCTTCATATCAATGGACGTGTCCAGAAGATTGTGGTGTTTGTCGAGG TTCATCAACAATAATAATAGAAAAATATTAATACCATTAAATCTGATAAA TAATTTTAGCAAGATGTAAAGACTTTTTTGCTGGGTGCTTTGATAGTTCA TCTCTTTGTCTCCAAAGTCATATGCAAAAGCATTGCCCAAAAAGTTGCGC TTCTTGTGATGGTTTGTATCTACAAAAAGATGTAATTAATGCAACTAAAA AGTATATATTTTTTAAGAATGTGAGGATATAATTAGCCCAAGGTTATGCG AACAGTACAGGGGTCGTTGTAAAACAGATATAAGTGTTATATATGCCTGT AGAGAAACATGTGGACTCTGTGGTGAGTTAATATGATTACATAAACGGGT CAAATTATTTATTCTTTATTTATACATAAATTAGATGATGATTGCAATGA TGCTTTTGTGCAAGAAAGTATGTGTACTATTTTTGAAAGCCGAGGGTATT GTAATGATCCTATTAATATAAATTTTATGAAAAAAGCA
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