EMLSAG00000010898, EMLSAG00000010898-693664 (gene) Lepeophtheirus salmonis

Overview
NameEMLSAG00000010898
Unique NameEMLSAG00000010898-693664
Typegene
OrganismLepeophtheirus salmonis (salmon louse)
Associated RNAi Experiments

Nothing found

Homology
[Close]
BLAST of EMLSAG00000010898 vs. C. finmarchicus
Match: gi|592888364|gb|GAXK01070011.1| (TSA: Calanus finmarchicus comp5033468_c0_seq1 transcribed RNA sequence)

HSP 1 Score: 31.9574 bits (71), Expect = 8.779e-1
Identity = 26/69 (37.68%), Postives = 33/69 (47.83%), Query Frame = 0 
Query:   20 ITETECVDDSEQVCQRQEGSCYIPSFQF--SCPQT-CGICKAKCK-DYNGDCALEYMQCGFNETLVSEC 84
            IT   CV ++++VC+ Q   C     QF  S P+T C   K KC    +G C     QCG  E L  EC
Sbjct:  637 ITRNTCVKNTQKVCKSQ--VCQTKPKQFCQSVPKTSCRAAKKKCTVSPHGKCGYSRRQCGCREELREEC 837
[Close]
BLAST of EMLSAG00000010898 vs. C. finmarchicus
Match: gi|592914585|gb|GAXK01043790.1| (TSA: Calanus finmarchicus comp51425_c0_seq1 transcribed RNA sequence)

HSP 1 Score: 29.6462 bits (65), Expect = 4.906e+0
Identity = 26/97 (26.80%), Postives = 39/97 (40.21%), Query Frame = 0 
Query:   20 ITETECVDDSEQVCQRQEGSCYIPSFQFSCPQTCGICKAKCKDYNGDCALEYMQCGFNETLVSECPKTCA----TCDVCEDLI--DTSLCVEGLSDC 110
             TE  CVD         +  CY  S    C ++CG+CK      +  C  EY  C   E   + C K  +    +C +C+ +    T+ C    S+C
Sbjct:  206 TTEATCVDKWSNCPDLAKDKCYKSSISTDCQKSCGLCKGMTPVASNTCYDEYGNC--EELAKTNCKKYGSQCKKSCGLCKGMTPHKTNTCYNSFSNC 490
[Close]
BLAST of EMLSAG00000010898 vs. C. finmarchicus
Match: gi|592914584|gb|GAXK01043791.1| (TSA: Calanus finmarchicus comp51425_c0_seq2 transcribed RNA sequence)

HSP 1 Score: 29.261 bits (64), Expect = 5.808e+0
Identity = 24/80 (30.00%), Postives = 31/80 (38.75%), Query Frame = 0 
Query:   20 ITETECVDDSEQVCQRQEGSCYIPSFQFSCPQTCGICKAKCKDYNGDCALEYMQCGFNETLV--------SECPKTCATC 91
             TE  CVD         +  CY  S    C ++CG+CK      +  C  EY  C   E L         S+C K+C  C
Sbjct:  214 TTEATCVDKWSNCPDLAKDKCYKSSISTDCQKSCGLCKGMTPVASNTCYDEYGNC---EELAKTNCKKYGSQCKKSCGLC 444
[Close]
BLAST of EMLSAG00000010898 vs. C. finmarchicus
Match: gi|592899710|gb|GAXK01058665.1| (TSA: Calanus finmarchicus comp1217785_c0_seq1 transcribed RNA sequence)

HSP 1 Score: 29.6462 bits (65), Expect = 6.074e+0
Identity = 37/130 (28.46%), Postives = 52/130 (40.00%), Query Frame = 0 
Query:   50 PQTCGICKAKCKDYNGDCAL--EYMQCGFNE-TLVSECPKTCATCDV--------CEDLIDTSLCVEGLSDCLNTYMRYACRKTCLYCEDPCNDAGNDSFCKSHVSGGTCTSNAAARRM---CKESCRIC 165
            P      + KC D N  CA   +  +C  N   ++  CP  C  CDV        C+D      C +   + +N Y   AC+K C      C D   D  C +    G CTS      M   CK++C++C
Sbjct:   94 PTQKPWVQQKCVDQNKYCATWAKLKECTQNPGWMLVHCPVACDQCDVKCNNNNVYCDDWARAGECTKN-KEYMNIYCSKACKK-CGTSNRNCKDENKD--CGTWGRKGFCTSGTYKNYMKLRCKKTCKLC 471
[Close]
BLAST of EMLSAG00000010898 vs. L. salmonis peptides
Match: EMLSAP00000010898 (pep:novel supercontig:LSalAtl2s:LSalAtl2s726:28203:28961:-1 gene:EMLSAG00000010898 transcript:EMLSAT00000010898 description:"maker-LSalAtl2s726-augustus-gene-0.7")

HSP 1 Score: 344.739 bits (883), Expect = 4.089e-122
Identity = 170/170 (100.00%), Postives = 170/170 (100.00%), Query Frame = 0 
Query:    1 MNSFYLVIIANFFQGINGKITETECVDDSEQVCQRQEGSCYIPSFQFSCPQTCGICKAKCKDYNGDCALEYMQCGFNETLVSECPKTCATCDVCEDLIDTSLCVEGLSDCLNTYMRYACRKTCLYCEDPCNDAGNDSFCKSHVSGGTCTSNAAARRMCKESCRICDPEQC 170
            MNSFYLVIIANFFQGINGKITETECVDDSEQVCQRQEGSCYIPSFQFSCPQTCGICKAKCKDYNGDCALEYMQCGFNETLVSECPKTCATCDVCEDLIDTSLCVEGLSDCLNTYMRYACRKTCLYCEDPCNDAGNDSFCKSHVSGGTCTSNAAARRMCKESCRICDPEQC
Sbjct:    1 MNSFYLVIIANFFQGINGKITETECVDDSEQVCQRQEGSCYIPSFQFSCPQTCGICKAKCKDYNGDCALEYMQCGFNETLVSECPKTCATCDVCEDLIDTSLCVEGLSDCLNTYMRYACRKTCLYCEDPCNDAGNDSFCKSHVSGGTCTSNAAARRMCKESCRICDPEQC 170
[Close]
BLAST of EMLSAG00000010898 vs. L. salmonis peptides
Match: EMLSAP00000003163 (pep:novel supercontig:LSalAtl2s:LSalAtl2s1767:48381:49134:-1 gene:EMLSAG00000003163 transcript:EMLSAT00000003163 description:"maker-LSalAtl2s1767-snap-gene-0.4")

HSP 1 Score: 240.736 bits (613), Expect = 2.991e-81
Identity = 117/168 (69.64%), Postives = 132/168 (78.57%), Query Frame = 0 
Query:    1 MNSFYLVIIANFFQGINGKITETECVDDSEQVCQRQEGSCYIPSFQFSCPQTCGICKAKCKDYNGDCALEYMQCGFNETLVSECPKTCATCDVCEDLIDTSLCVEGLSDCLNTYMRYACRKTCLYCEDPCNDAGNDSFCKSHVSGGTCTSNAAARRMCKESCRICDPE 168
            MNSF+LV+IA F QGINGKIT+TECVDDSE +CQRQEGSCYIPS Q  CP TCG+CKAKCKDY  DC LE  QC ++ET  +ECPKTCATCDVCEDLID  +C EGLSDC + YMRYACRKTCLYC DP ND GN +FCK H   G+C +N     MCK++C ICD E
Sbjct:    1 MNSFHLVLIAFFLQGINGKITDTECVDDSETLCQRQEGSCYIPSIQHRCPVTCGVCKAKCKDYKDDCPLENEQCDYDETFQTECPKTCATCDVCEDLIDPLICNEGLSDCHHKYMRYACRKTCLYCMDPYNDVGNGAFCKMHKISGSCENNEVVIHMCKKTCNICDEE 168
[Close]
BLAST of EMLSAG00000010898 vs. L. salmonis peptides
Match: EMLSAP00000010899 (pep:novel supercontig:LSalAtl2s:LSalAtl2s726:81215:81971:1 gene:EMLSAG00000010899 transcript:EMLSAT00000010899 description:"maker-LSalAtl2s726-augustus-gene-0.5")

HSP 1 Score: 239.965 bits (611), Expect = 7.967e-81
Identity = 113/170 (66.47%), Postives = 135/170 (79.41%), Query Frame = 0 
Query:    1 MNSFYLVIIANFFQGINGKITETECVDDSEQVCQRQEGSCYIPSFQFSCPQTCGICKAKCKDYNGDCALEYMQCGFNETLVSECPKTCATCDVCEDLIDTSLCVEGLSDCLNTYMRYACRKTCLYCEDPCNDAGNDSFCKSHVSGGTCTSNAAARRMCKESCRICDPEQC 170
            MNSFYLV++A FFQGINGKI+ TECVDDSEQ C+ QE  C+IPS QFSCPQTCG+C A+CKDY GDC++E MQCG+N T   ECPKTCA CDVCEDLIDT++C+E L DC N YMRYACRKTCLYC D CND G++ FC      G+C +N   ++MCK++C IC+ EQC
Sbjct:    1 MNSFYLVLMACFFQGINGKISATECVDDSEQSCKSQESRCFIPSVQFSCPQTCGVCNARCKDYKGDCSVEEMQCGYNLTFPIECPKTCAKCDVCEDLIDTAICMESLDDCTNAYMRYACRKTCLYCIDSCNDVGSEDFCNIQKLSGSCENNEVVKKMCKKTCNICEFEQC 170
[Close]
BLAST of EMLSAG00000010898 vs. L. salmonis peptides
Match: EMLSAP00000010892 (pep:novel supercontig:LSalAtl2s:LSalAtl2s726:17362:18120:-1 gene:EMLSAG00000010892 transcript:EMLSAT00000010892 description:"maker-LSalAtl2s726-augustus-gene-0.6")

HSP 1 Score: 224.557 bits (571), Expect = 7.912e-75
Identity = 107/170 (62.94%), Postives = 128/170 (75.29%), Query Frame = 0 
Query:    1 MNSFYLVIIANFFQGINGKITETECVDDSEQVCQRQEGSCYIPSFQFSCPQTCGICKAKCKDYNGDCALEYMQCGFNETLVSECPKTCATCDVCEDLIDTSLCVEGLSDCLNTYMRYACRKTCLYCEDPCNDAGNDSFCKSHVSGGTCTSNAAARRMCKESCRICDPEQC 170
            M SFYLV+IA F QGINGK  +TEC DDS+ VC+ QE  C+IPS QF+CP+TC +C+A+CKDYN +C  E  QCG N T+ +ECPKTCATCDVCEDLIDTS+C   L DC N YMRYACRKTCLYC DPCN+ GND FCK H +   C  N   ++MC++SC  C+ EQC
Sbjct:    1 MKSFYLVLIACFIQGINGKKYDTECEDDSQHVCENQESRCFIPSVQFNCPKTCSVCEAQCKDYNDNCYQENFQCGNNVTISNECPKTCATCDVCEDLIDTSICQTSLKDCHNNYMRYACRKTCLYCLDPCNNVGNDDFCKLHTTNRICEKNDVFKKMCRKSCNFCELEQC 170
[Close]
BLAST of EMLSAG00000010898 vs. L. salmonis peptides
Match: EMLSAP00000006239 (pep:novel supercontig:LSalAtl2s:LSalAtl2s3409:1295:2068:-1 gene:EMLSAG00000006239 transcript:EMLSAT00000006239 description:"maker-LSalAtl2s3409-augustus-gene-0.1")

HSP 1 Score: 187.578 bits (475), Expect = 1.969e-60
Identity = 90/169 (53.25%), Postives = 117/169 (69.23%), Query Frame = 0 
Query:    1 MNSFYLVIIANFFQGINGKITETECVDDSEQVCQRQEGSCYIPSFQFSCPQTCGICKAKCKDYNGDCALEYMQCGFNETLVSECPKTCATCDVCEDLIDTSLCVEGLSDCLNTYMRYACRKTCLYCEDPCNDAGNDSFCKSHVSGGTCTSNAAARRMCKESCRICDPEQ 169
            M S YLV+IA FF+GING + E EC+DDS++ C+ +E  C+ P  Q++CP+TCG+C   CKDYNG C  E  Q   N  L+ ECPKTCA CD+CEDLID+S+C   LS+C    M+YACRK+C YC+D CND G+  FC  HV  G C  N   +RMC++SC +C+ EQ
Sbjct:    1 MKSKYLVLIACFFRGINGIVLEMECLDDSKRSCEGKENQCFEPYQQYTCPETCGVCNTTCKDYNGICFNEDSQXTINSNLLYECPKTCAKCDLCEDLIDSSICETRLSECALKKMKYACRKSCKYCKDACNDVGSHDFCDVHVRRGDCEKNETVKRMCRKSCELCEIEQ 169
[Close]
BLAST of EMLSAG00000010898 vs. L. salmonis peptides
Match: EMLSAP00000007568 (pep:novel supercontig:LSalAtl2s:LSalAtl2s4372:5191:5850:1 gene:EMLSAG00000007568 transcript:EMLSAT00000007568 description:"maker-LSalAtl2s4372-snap-gene-0.1")

HSP 1 Score: 137.117 bits (344), Expect = 3.557e-41
Identity = 66/128 (51.56%), Postives = 81/128 (63.28%), Query Frame = 0 
Query:   24 ECVDDSEQVCQRQEGSCYIPSFQFSCPQTCGICKAKCKDYNGDCALEYMQCGFNETLVSECPKTCATCDVCEDLIDTSLCVEGLSDCLNTYMRYACRKTCLYCEDPCNDAGNDSFCKSHVSGGTCTSN 151
            +C+D  E  C+  +  C+  S QF CPQTCG+C A CKDYN +C  E   C  N   + ECPKTCA CDVCEDLID+S+C   LS+C    M+YACRK+C +CED CND G+   C  HV  G C  N
Sbjct:    2 DCLDSPESNCRSXKDQCFDSSIQFVCPQTCGVCNAICKDYNSNCLTEESXCILNNNXLDECPKTCAKCDVCEDLIDSSICETKLSECAQNQMKYACRKSCKHCEDKCNDVGSHDLCSEHVRRGDCEKN 129
[Close]
BLAST of EMLSAG00000010898 vs. L. salmonis peptides
Match: EMLSAP00000003732 (pep:novel supercontig:LSalAtl2s:LSalAtl2s2000:16746:17193:1 gene:EMLSAG00000003732 transcript:EMLSAT00000003732 description:"maker-LSalAtl2s2000-augustus-gene-0.2")

HSP 1 Score: 134.42 bits (337), Expect = 2.232e-40
Identity = 67/112 (59.82%), Postives = 79/112 (70.54%), Query Frame = 0 
Query:   59 KCKDYNGDCALEYMQCGFNETLVSECPKTCATCDVCEDLIDTSLCVEGLSDCLNTYMRYACRKTCLYCEDPCNDAGNDSFCKSHVSGGTCTSNAAARRMCKESCRICDPEQC 170
            KCKDY  +C  E+ QCG NET+  EC KTCA  DVCEDLIDTS+C + L DC N YM+YACRKTCLYC DPCND GN  FCK H   G   SN A + +C++SC  C+ +QC
Sbjct:    1 KCKDYINNCYGEFSQCGSNETISKECLKTCAKXDVCEDLIDTSICEKSLKDCNNNYMKYACRKTCLYCLDPCNDVGNADFCKIHKDNGAFKSNEAFKIICRKSCNFCEIKQC 112
[Close]
BLAST of EMLSAG00000010898 vs. L. salmonis peptides
Match: EMLSAP00000006643 (pep:novel supercontig:LSalAtl2s:LSalAtl2s3671:6789:7712:-1 gene:EMLSAG00000006643 transcript:EMLSAT00000006643 description:"maker-LSalAtl2s3671-snap-gene-0.3")

HSP 1 Score: 89.7373 bits (221), Expect = 2.375e-22
Identity = 51/130 (39.23%), Postives = 73/130 (56.15%), Query Frame = 0 
Query:   12 FFQGINGKITETECVDDSEQVCQRQEGS----CYIPSFQFSCPQTCGICKAKCKDYNGDCALEYMQCGFNETLVSECPKTCATCDVCEDLIDTSLCVEGLSDC-LNTYMRYACRKTCLYCEDPCNDAGND 136
             F    G ++ T C D  E  C    GS    C+  +FQ++CP++CGIC AKC+D NG C  + ++  F   + +ECPK+CA CD CEDLI    C    + C  +  ++Y+CRK C  C+  CN+A  D
Sbjct:   65 LFHQCFGILSNTTCEDTDETYCHSSIGSSKESCFDAAFQYTCPKSCGICDAKCRDNNGACYRDSIEECFEPQIANECPKSCAGCDECEDLISIEFCESIKNRCSTDASVQYSCRKXCHLCKSNCNNAYYD 194
[Close]
BLAST of EMLSAG00000010898 vs. L. salmonis peptides
Match: EMLSAP00000005975 (pep:novel supercontig:LSalAtl2s:LSalAtl2s322:19068:19805:-1 gene:EMLSAG00000005975 transcript:EMLSAT00000005975 description:"maker-LSalAtl2s322-augustus-gene-0.10")

HSP 1 Score: 87.0409 bits (214), Expect = 1.302e-21
Identity = 53/136 (38.97%), Postives = 76/136 (55.88%), Query Frame = 0 
Query:   18 GKITETECVDDSEQ---VCQRQEGSCYIPSFQFSCPQTCGICKAKCKDYNGDCALEYMQCGFNETLVSECPKTCATCDVCEDLIDTSLCVEGLSDC-LNTYMRYACRKTCLYCEDPCNDAG-NDSFCKSHVSGGTC 148
            G ITE EC +       + +  + +C IPS+Q++CP+ CG+C+A+CKD+   C      C     +   CPK+CA+CD CED+I   LC +    C  +  + YACR+TC  C+D CNDA   +S C    S G C
Sbjct:   20 GLITEFECRNSYHNCRDLVETTDRACLIPSYQWTCPEDCGVCRARCKDFFAGCFDSSSLC-LQSHMQKHCPKSCASCDECEDIISPRLCEQYRGRCKTDISVIYACRETCGLCDDDCNDAFVQESMCTIFESRGYC 154
[Close]
BLAST of EMLSAG00000010898 vs. L. salmonis peptides
Match: EMLSAP00000005974 (pep:novel supercontig:LSalAtl2s:LSalAtl2s322:1175:2268:1 gene:EMLSAG00000005974 transcript:EMLSAT00000005974 description:"maker-LSalAtl2s322-augustus-gene-0.11")

HSP 1 Score: 85.1149 bits (209), Expect = 2.946e-21
Identity = 52/135 (38.52%), Postives = 77/135 (57.04%), Query Frame = 0 
Query:   41 YIPSFQFSCPQTCGICKAKCKDYNGDCALEYMQCGFNETLVSECPKTCATCDVCEDLIDTSLCVEGLSDC-LNTYMRYACRKTCLYCEDPCNDAG-NDSFCKSHVSGGTCTSNAA---ARRMCKESCRICDPEQC 170
            Y    Q+ CP+ CG+C+A C+D    C LE+ +    +++  +CPK+CA+CD CEDLI++ LC      C  +T ++YACRKTC  C+D CNDA  ++S C    + G C  +       R C+ +C  C  E C
Sbjct:    4 YCLXXQWMCPEQCGVCQASCRDTGASC-LEHSESCLQKSIEKQCPKSCASCDDCEDLINSDLCSGYKHRCGEDTSVQYACRKTCGLCDDSCNDASVHESLCYKFENNGYCEKSNTMDFMNRACRRTCGFCFLETC 137
[Close]
BLAST of EMLSAG00000010898 vs. nr
Match: gi|225712722|gb|ACO12207.1| (ZK643.6 precursor [Lepeophtheirus salmonis])

HSP 1 Score: 196.438 bits (498), Expect = 1.749e-61
Identity = 96/165 (58.18%), Postives = 117/165 (70.91%), Query Frame = 0 
Query:    1 MNSFYLVIIANFFQGINGKITETECVDDSEQVCQRQEGSCYIPSFQFSCPQTCGICKAKCKDYNGDCALEYMQCGFNETLVSECPKTCATCDVCEDLIDTSLCVEGLSDCLNTYMRYACRKTCLYCEDPCNDAGNDSFCKSHVSGGTCTSNAAARRMCKESCRIC 165
            M S YLV+IA FFQGING I+ T CVD+S+ VC   +G C  PS  ++CP+TCG+CKA CKDYN +C  E  QC  N+ L + CPKTCATCD CEDLID+S+C    SDC    M+Y CRK+C YCED CND  +D  CKSHVS G C +N A +RMCK+SC +C
Sbjct:    1 MKSLYLVLIACFFQGINGLISNTLCVDNSKSVCNSLQGQCNQPSILYTCPETCGVCKAICKDYNANCFNEDSQCTINKNLSNTCPKTCATCDECEDLIDSSICENKKSDCAEDNMKYVCRKSCKYCEDTCNDVASDELCKSHVSRGDCGNNEAVKRMCKKSCELC 165
[Close]
BLAST of EMLSAG00000010898 vs. nr
Match: gi|290462093|gb|ADD24094.1| (protein ZK643.6 [Lepeophtheirus salmonis])

HSP 1 Score: 65.4698 bits (158), Expect = 2.171e-10
Identity = 47/164 (28.66%), Postives = 76/164 (46.34%), Query Frame = 0 
Query:    1 MNSFYLVIIANFFQGINGKITETECVDDSEQVCQRQEGSCYIPSFQFSCPQTCGICKAKCKDYNGDCALEYMQCGFNETLVSECPKTCATCDVCEDLIDTSLCVEGLSDCLNTYMRYACRKTCLYCEDPCND-AGNDSFCKSHVSGGTCTSNAAARRMCKESCR 163
            M +  L+II+ F   +NG+   T   ++  + C+     C  P + F C ++CG C++ C D +  C     +C  +     EC + C  CD CEDL++  +C +  + C N  +RY C  TC  CE  C D    +  C +    G C   +   R  K +C+
Sbjct:    1 MINRVLIIISFFLVVVNGQGNST--CENEMESCETNTFKCMNPEYYFKCKKSCG-CESACTDTSIKCINNPNKC-LDRDQRLECQRACGNCDRCEDLLEHIMCNQLKNLCNNGNVRYFCPATCRLCEKSCRDNLPYNRVCHNFKKSGFCDRKSIYNRFMKSACQ 160
The following BLAST results are available for this feature:
BLAST of EMLSAG00000010898 vs. GO
Analysis Date: 2014-04-02 (Blast vs. GO)
Total hits: 0
Match NameE-valueIdentityDescription
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BLAST of EMLSAG00000010898 vs. C. finmarchicus
Analysis Date: 2014-05-09 (TblastN vs C. finmarchicus TSA)
Total hits: 4
Match NameE-valueIdentityDescription
gi|592888364|gb|GAXK01070011.1|8.779e-137.68TSA: Calanus finmarchicus comp5033468_c0_seq1 tran... [more]
gi|592914585|gb|GAXK01043790.1|4.906e+026.80TSA: Calanus finmarchicus comp51425_c0_seq1 transc... [more]
gi|592914584|gb|GAXK01043791.1|5.808e+030.00TSA: Calanus finmarchicus comp51425_c0_seq2 transc... [more]
gi|592899710|gb|GAXK01058665.1|6.074e+028.46TSA: Calanus finmarchicus comp1217785_c0_seq1 tran... [more]
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BLAST of EMLSAG00000010898 vs. L. salmonis peptides
Analysis Date: 2014-05-10 (Blastp vs. self)
Total hits: 25
Match NameE-valueIdentityDescription
EMLSAP000000108984.089e-122100.00pep:novel supercontig:LSalAtl2s:LSalAtl2s726:28203... [more]
EMLSAP000000031632.991e-8169.64pep:novel supercontig:LSalAtl2s:LSalAtl2s1767:4838... [more]
EMLSAP000000108997.967e-8166.47pep:novel supercontig:LSalAtl2s:LSalAtl2s726:81215... [more]
EMLSAP000000108927.912e-7562.94pep:novel supercontig:LSalAtl2s:LSalAtl2s726:17362... [more]
EMLSAP000000062391.969e-6053.25pep:novel supercontig:LSalAtl2s:LSalAtl2s3409:1295... [more]
EMLSAP000000075683.557e-4151.56pep:novel supercontig:LSalAtl2s:LSalAtl2s4372:5191... [more]
EMLSAP000000037322.232e-4059.82pep:novel supercontig:LSalAtl2s:LSalAtl2s2000:1674... [more]
EMLSAP000000066432.375e-2239.23pep:novel supercontig:LSalAtl2s:LSalAtl2s3671:6789... [more]
EMLSAP000000059751.302e-2138.97pep:novel supercontig:LSalAtl2s:LSalAtl2s322:19068... [more]
EMLSAP000000059742.946e-2138.52pep:novel supercontig:LSalAtl2s:LSalAtl2s322:1175:... [more]

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BLAST of EMLSAG00000010898 vs. SwissProt
Analysis Date: 2017-02-10 (Blastp vs. SwissProt)
Total hits: 0
Match NameE-valueIdentityDescription
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BLAST of EMLSAG00000010898 vs. Select Arthropod Genomes
Analysis Date: 2017-02-20 (Blastp vs. Selected Arthropods)
Total hits: 0
Match NameE-valueIdentityDescription
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BLAST of EMLSAG00000010898 vs. nr
Analysis Date: 2017-02-20 (Blastp vs. NR (2/2017))
Total hits: 2
Match NameE-valueIdentityDescription
gi|225712722|gb|ACO12207.1|1.749e-6158.18ZK643.6 precursor [Lepeophtheirus salmonis][more]
gi|290462093|gb|ADD24094.1|2.171e-1028.66protein ZK643.6 [Lepeophtheirus salmonis][more]
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BLAST of EMLSAG00000010898 vs. Tigriopus kingsejongenis genes
Analysis Date: 2018-04-18 (Blastp vs. Tigriopus kingsejongensis proteins)
Total hits: 0
Match NameE-valueIdentityDescription
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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
LSalAtl2s726supercontigLSalAtl2s726:28203..28961 -
Analyses
This gene is derived from or has results from the following analyses
Analysis NameDate Performed
ensembl2013-09-26 .965016
Blast vs. GO2014-04-02
TblastN vs C. finmarchicus TSA2014-05-09
Blastp vs. self2014-05-10
Blastp vs. SwissProt2017-02-10
Blastp vs. Selected Arthropods2017-02-20
Blastp vs. NR (2/2017)2017-02-20
Blastp vs. Tigriopus kingsejongensis proteins2018-04-18
Properties
Property NameValue
Logic nameensemblgenomes
Descriptionmaker-LSalAtl2s726-augustus-gene-0.7
Biotypeprotein_coding
EvidenceIEA
NoteZK643.6 precursor [Lepeophtheirus salmonis]
Cross References
External references for this gene
DatabaseAccession
Ensembl Metazoa (gene)EMLSAG00000010898 (primary cross-reference)
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameSpeciesType
EMLSAT00000010898EMLSAT00000010898-706745Lepeophtheirus salmonismRNA


Sequences
The following sequences are available for this feature:

gene from alignment at LSalAtl2s726:28203..28961-

Legend: mRNA
Hold the cursor over a type above to highlight its positions in the sequence below.
>EMLSAG00000010898-693664 ID=EMLSAG00000010898-693664|Name=EMLSAG00000010898|organism=Lepeophtheirus salmonis|type=gene|length=759bp|location=Sequence derived from alignment at LSalAtl2s726:28203..28961- (Lepeophtheirus salmonis)
ATGAACTCCTTTTATTTAGTTATAATCGCAAATTTTTTTCAAGGAATTAA
TGGAAAAATAACTGGTGAAATTTGAATTATTTTAAAAATTAAGCAATCTT
TCTAAAAAATCCTTTACTTAGAAACGGAGTGCGTGGATGACAGTGAACAA
GTTTGTCAAAGACAGGAAGGTAGTTGTTATATTCCATCCTTTCAATTTAG
TTGTCCACAAACATGTGGAATATGTAAAGGTAAGCATTGTCTATAAGTAC
AAATAAAGTAAATAGTTATATCCTTAACTTTTCCGTATATGTTTTATTTA
TTTTATTAGCTAAATGCAAGGATTATAACGGTGATTGCGCTCTGGAATAC
ATGCAATGCGGTTTTAATGAAACTTTAGTGAGTGAATGCCCAAAAACATG
TGCTACGTGTGATGGTAAATTTTTATTTACACAATAAGAATGACGTAGAT
AATAAAATTTTCCTATTTTTAGTATGTGAGGATTTGATAGACACCTCACT
TTGTGTTGAAGGTTTAAGTGATTGTCTAAATACATATATGAGATATGCTT
GTAGAAAAACATGTCTATATTGCGGTAAGTTAACAACGTAATTTTGTTAA
TAAATATCACTTTTTAAAATTTTAGAGGATCCATGTAATGACGCTGGTAA
TGATAGCTTTTGTAAATCACATGTAAGTGGTGGAACCTGTACCAGTAATG
CTGCTGCTAGAAGAATGTGTAAAGAATCATGTAGGATTTGTGATCCAGAA
CAATGTTAG
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