EMLSAG00000000512, EMLSAG00000000512-683278 (gene) Lepeophtheirus salmonis

Overview
NameEMLSAG00000000512
Unique NameEMLSAG00000000512-683278
Typegene
OrganismLepeophtheirus salmonis (salmon louse)
Associated RNAi Experiments

Nothing found

Homology
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BLAST of EMLSAG00000000512 vs. C. finmarchicus
Match: gi|592854055|gb|GAXK01103489.1| (TSA: Calanus finmarchicus comp61937_c0_seq1 transcribed RNA sequence)

HSP 1 Score: 80.8777 bits (198), Expect = 4.819e-17
Identity = 38/81 (46.91%), Postives = 54/81 (66.67%), Query Frame = 0 
Query:   96 DSYFLAIADMDVDDCGKKYVCEIEILDPSQRTTEEAMIATLFGDA-SLDPVSPKAEYDLAAYLGQTTRSKHACARRYKRCP 175
            DS F  ++ MD+  CGK+ VCE+E    S+RT E+ ++ +LFG   S++P S KAEYDLAA LG  ++S+  C +RY  CP
Sbjct:  349 DSLFQLVSSMDLYSCGKQLVCELEAKADSERTPEDMLMISLFGKGKSVNPASAKAEYDLAAELGMASKSQIVCRKRYSTCP 591
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BLAST of EMLSAG00000000512 vs. C. finmarchicus
Match: gi|592833102|gb|GAXK01124442.1| (TSA: Calanus finmarchicus comp24536_c0_seq1 transcribed RNA sequence)

HSP 1 Score: 70.8626 bits (172), Expect = 7.625e-14
Identity = 40/106 (37.74%), Postives = 60/106 (56.60%), Query Frame = 0 
Query:   80 RNRRDAEEHVNRLSA--LDSYFLAIADMDVDDCGKKYVCEI-EILDPSQRTTEEAMIATLFGDAS-LDPVSPKAEYDLAAYLGQTTRSKHACARRYKRCPVDRKTI 181
            R +R  +E   ++S+   + +F  IA  DV DCGK  VCE+   +D  Q   +E  I  LF D   +DP S ++EY LAAYLG   +++  C RRY +CP+  + +
Sbjct:  274 RGKRSVDEDAEKVSSAQFNDFFDVIAKSDVADCGKLLVCELMSRVDLDQ---DEKRIVNLFDDLEHIDPSSGRSEYQLAAYLGSLNQTEAICVRRYSKCPMSTEEV 582
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BLAST of EMLSAG00000000512 vs. C. finmarchicus
Match: gi|592935479|gb|GAXK01023074.1| (TSA: Calanus finmarchicus comp114460_c1_seq1 transcribed RNA sequence)

HSP 1 Score: 60.4622 bits (145), Expect = 2.758e-10
Identity = 30/85 (35.29%), Postives = 43/85 (50.59%), Query Frame = 0 
Query:   95 LDSYFLAIADMDVDDCGKKYVCEIEILDPSQRTTEEAMIATLFGDASLDP--VSPKAEYDLAAYLGQTTRSKHACARRYKRCPVD 177
             +  F  I+ MDV+DC K+YVCEI        + ++    ++FG   L     S K EYD+A   G T  +   C   YK+CPV+
Sbjct:  578 FEHVFQKISAMDVNDCAKRYVCEISATPRDHLSAQDISTLSMFGQHVLKSKTTSAKYEYDMAWARGNTAENAETCKNVYKKCPVN 832
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BLAST of EMLSAG00000000512 vs. C. finmarchicus
Match: gi|592774535|gb|GAXK01180033.1| (TSA: Calanus finmarchicus comp1833751_c0_seq1 transcribed RNA sequence)

HSP 1 Score: 55.0694 bits (131), Expect = 8.991e-9
Identity = 30/84 (35.71%), Postives = 41/84 (48.81%), Query Frame = 0 
Query:   95 LDSYFLAIADMDVDDCGKKYVCEIEILDPSQRTTEEAMIATLFGDASLDPVSPKA--EYDLAAYLGQTTRSKHACARRYKRCPV 176
            LD  F  I+++DV DC K+YVCEI          ++     LF    L   S  A  EYD A  LG+  +    C +RY +CP+
Sbjct:  351 LDQIFQEISELDVADCAKRYVCEISARQSQLLNRQDISTLGLFKRGVLKNKSNFALMEYDKARTLGKVYKDTKKCRQRYDKCPI 602
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BLAST of EMLSAG00000000512 vs. C. finmarchicus
Match: gi|592944920|gb|GAXK01013633.1| (TSA: Calanus finmarchicus comp8347_c0_seq1 transcribed RNA sequence)

HSP 1 Score: 53.9138 bits (128), Expect = 3.240e-8
Identity = 37/111 (33.33%), Postives = 53/111 (47.75%), Query Frame = 0 
Query:   80 RNRRDAEEHVNRLSALDSYFLAIADMDVDDCGKKYVCEIEILDPSQRTTEEAMIATLFGDASLDPVSPKAEYDLAAYLGQTTRSKHACARRYKRCPVDRKTISQAFIKNRQ 190
            R  RD  +   ++   D  F AI++MDV DC KKYVCEI        ++++     LF        S K  +D AA LG  T +   C  RY +C +  + ++ A I N Q
Sbjct:  342 RKGRDVGDE--QVEETDFVFKAISEMDVTDCAKKYVCEISATPFELLSSQDINTLVLFQAPLSRAGSFKRSFDEAAILGLNTGNLLTCQERYSKCGI--QGVALANILNTQ 662
[Close]
BLAST of EMLSAG00000000512 vs. C. finmarchicus
Match: gi|592774534|gb|GAXK01180034.1| (TSA: Calanus finmarchicus comp1833751_c0_seq2 transcribed RNA sequence)

HSP 1 Score: 53.5286 bits (127), Expect = 3.798e-8
Identity = 31/99 (31.31%), Postives = 47/99 (47.47%), Query Frame = 0 
Query:   80 RNRRDAEEHVNRLSALDSYFLAIADMDVDDCGKKYVCEIEILDPSQRTTEEAMIATLFGDASLDPVSPKA--EYDLAAYLGQTTRSKHACARRYKRCPV 176
            R +R+ E      + ++  F  I+++DV DC K+YVCEI          ++     LF    L   S  A  EYD A  LG+  +    C +RY +CP+
Sbjct:  314 RGKREVESDT---ADIEQIFQEISELDVADCAKRYVCEISARQSQLLNRQDISTLGLFKRGVLKNKSNFALMEYDKARTLGKVYKDTKKCRQRYDKCPI 601
[Close]
BLAST of EMLSAG00000000512 vs. C. finmarchicus
Match: gi|592926123|gb|GAXK01032308.1| (TSA: Calanus finmarchicus comp21077_c1_seq1 transcribed RNA sequence)

HSP 1 Score: 47.7506 bits (112), Expect = 4.601e-6
Identity = 33/100 (33.00%), Postives = 52/100 (52.00%), Query Frame = 0 
Query:   78 LLRNRRDAEEHVNRLSALDSYFLAIADMDVDDCGKKYVCEIEILDPS--QRTTEEAMIATLFGDASLDPVSP-KAEYDLAAYLGQTTRSKHACARRYKRC 174
            L R +RD +E  N  + ++ ++  + +MD D CGKK +CE+   + S    + +E +IA  FG      VS    E+DLAA +G     +  C + Y RC
Sbjct:  180 LHRMKRDIDE--NGFN-MNDWYRDMTEMDQDSCGKKLICELRSKEASGVSMSADEKLIAEKFGSGKQVDVSDITVEFDLAAQIG-LNMGEARCGQLYNRC 467
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BLAST of EMLSAG00000000512 vs. C. finmarchicus
Match: gi|592830700|gb|GAXK01126844.1| (TSA: Calanus finmarchicus comp47414_c0_seq3 transcribed RNA sequence)

HSP 1 Score: 43.8986 bits (102), Expect = 2.782e-5
Identity = 25/72 (34.72%), Postives = 39/72 (54.17%), Query Frame = 0 
Query:  106 DVDDCGKKYVCEIEI--LDPSQRTTEEAMIATLFG-DASLDPVSPKAEYDLAAYLGQTTRSKHACARRYKRC 174
            D DDC K+ +CE+    ++    T  E +IA  FG +  +D  +   E+DLAA LG+   S+  C   ++RC
Sbjct:   52 DQDDCSKRLLCELNAKQIEGKWLTENERIIANSFGQNNEIDIAAETLEFDLAAVLGKKGGSRR-CELSFRRC 264
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BLAST of EMLSAG00000000512 vs. C. finmarchicus
Match: gi|592835767|gb|GAXK01121777.1| (TSA: Calanus finmarchicus comp107205_c3_seq2 transcribed RNA sequence)

HSP 1 Score: 45.0542 bits (105), Expect = 4.245e-5
Identity = 25/72 (34.72%), Postives = 40/72 (55.56%), Query Frame = 0 
Query:  106 DVDDCGKKYVCEIEIL--DPSQRTTEEAMIATLFGDAS-LDPVSPKAEYDLAAYLGQTTRSKHACARRYKRC 174
            D DDC K+ VCE+  +  D  + +  E ++A  FG++  LD      E+D+AA LG+   ++  C   Y+RC
Sbjct:  109 DQDDCSKRLVCELNAMRSDGQELSEHEEVLANAFGNSGELDIGKDSLEFDMAAVLGREVGARR-CELSYRRC 321
[Close]
BLAST of EMLSAG00000000512 vs. C. finmarchicus
Match: gi|592835768|gb|GAXK01121776.1| (TSA: Calanus finmarchicus comp107205_c3_seq1 transcribed RNA sequence)

HSP 1 Score: 45.0542 bits (105), Expect = 5.065e-5
Identity = 25/72 (34.72%), Postives = 40/72 (55.56%), Query Frame = 0 
Query:  106 DVDDCGKKYVCEIEIL--DPSQRTTEEAMIATLFGDAS-LDPVSPKAEYDLAAYLGQTTRSKHACARRYKRC 174
            D DDC K+ VCE+  +  D  + +  E ++A  FG++  LD      E+D+AA LG+   ++  C   Y+RC
Sbjct:  180 DQDDCSKRLVCELNAMRSDGQELSEHEEVLANAFGNSGELDIGKDSLEFDMAAVLGREVGARR-CELSYRRC 392
[Close]
BLAST of EMLSAG00000000512 vs. L. salmonis peptides
Match: EMLSAP00000000512 (pep:novel supercontig:LSalAtl2s:LSalAtl2s107:493556:498566:1 gene:EMLSAG00000000512 transcript:EMLSAT00000000512 description:"maker-LSalAtl2s107-snap-gene-5.72")

HSP 1 Score: 385.571 bits (989), Expect = 1.407e-137
Identity = 190/190 (100.00%), Postives = 190/190 (100.00%), Query Frame = 0 
Query:    1 MLGLVAKMNQMIAFVFASCMVASVYGIFDPISITGLATGGAAXALGTSTVFATPAGIALGAAGLLGAAAVKGAIIGSLLRNRRDAEEHVNRLSALDSYFLAIADMDVDDCGKKYVCEIEILDPSQRTTEEAMIATLFGDASLDPVSPKAEYDLAAYLGQTTRSKHACARRYKRCPVDRKTISQAFIKNRQ 190
            MLGLVAKMNQMIAFVFASCMVASVYGIFDPISITGLATGGAAXALGTSTVFATPAGIALGAAGLLGAAAVKGAIIGSLLRNRRDAEEHVNRLSALDSYFLAIADMDVDDCGKKYVCEIEILDPSQRTTEEAMIATLFGDASLDPVSPKAEYDLAAYLGQTTRSKHACARRYKRCPVDRKTISQAFIKNRQ
Sbjct:    1 MLGLVAKMNQMIAFVFASCMVASVYGIFDPISITGLATGGAAXALGTSTVFATPAGIALGAAGLLGAAAVKGAIIGSLLRNRRDAEEHVNRLSALDSYFLAIADMDVDDCGKKYVCEIEILDPSQRTTEEAMIATLFGDASLDPVSPKAEYDLAAYLGQTTRSKHACARRYKRCPVDRKTISQAFIKNRQ 190
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BLAST of EMLSAG00000000512 vs. L. salmonis peptides
Match: EMLSAP00000003871 (pep:novel supercontig:LSalAtl2s:LSalAtl2s20:890516:891122:-1 gene:EMLSAG00000003871 transcript:EMLSAT00000003871 description:"maker-LSalAtl2s20-augustus-gene-8.8")

HSP 1 Score: 85.8853 bits (211), Expect = 6.845e-21
Identity = 62/175 (35.43%), Postives = 83/175 (47.43%), Query Frame = 0 
Query:   13 AFVFASCMVASVYGIFDPISITGLATGGAAXALGTSTVFATPAGIALGAAGLLGAAAVKGAIIGSLLRNR--RDA---EEHVNRLSALDSYFLAIADMDVDDCGKKYVCEIEILDPSQRTTEEAMIATLF-GDASLDPVSPKAEYDLAAYLGQTTRSKHACARRYKRCPVDRKTI 181
            A    + +++SVYG FDP+++T          +GT     T A   LG A L G A  K  +I S L NR  RD    +E  N    L+++F A+   DV DCGK  VCE+     S+   EE +IA LF  +      S   EY  AAY+G T +    C  RY  C V  K +
Sbjct:    8 ALFLTATVISSVYG-FDPVTLT----------VGTXAYVLTAAQTTLGVAALAGLAIAKEKLIISALSNRGKRDVSAVQEAKN--VDLNAFFWAVGQADVSDCGKLLVCEVMATPTSELKREEELIANLFDNEGKFTADSATNEYQFAAYVG-TLQQPQLCKERYATCTVPSKEL 168
[Close]
BLAST of EMLSAG00000000512 vs. L. salmonis peptides
Match: EMLSAP00000012083 (pep:novel supercontig:LSalAtl2s:LSalAtl2s864:105123:106860:1 gene:EMLSAG00000012083 transcript:EMLSAT00000012083 description:"maker-LSalAtl2s864-augustus-gene-0.14")

HSP 1 Score: 75.0998 bits (183), Expect = 4.723e-17
Identity = 46/116 (39.66%), Postives = 63/116 (54.31%), Query Frame = 0 
Query:   70 VKGAIIGSLLRNRRDAEEHVNRLSALDSYFLAIADMDVDDCGKKYVCEIEILDPSQRTTEEAMIATLFGDASLDPVSPKAEYDLAAYLGQTTRSKHACARRYKRCPVDRKTISQAF 185
            V GAIIG   R +R A +       L+S  L+ +  D  DC KK VCE+  L  ++  +E AMIA LF   SLD      E+DLAA +G+    K  CA  Y+RCP +R+ + + F
Sbjct:   76 VAGAIIG---RGKRSAID-------LESLLLSASQRDFSDCAKKLVCEVNGLSRAEIESEXAMIAALFNADSLDLSKATVEFDLAAQIGKRV-GKEQCAVIYERCPHNRQKLMKIF 180
[Close]
BLAST of EMLSAG00000000512 vs. L. salmonis peptides
Match: EMLSAP00000012085 (pep:novel supercontig:LSalAtl2s:LSalAtl2s864:165170:165932:1 gene:EMLSAG00000012085 transcript:EMLSAT00000012085 description:"maker-LSalAtl2s864-augustus-gene-0.15")

HSP 1 Score: 64.6994 bits (156), Expect = 1.556e-13
Identity = 42/125 (33.60%), Postives = 59/125 (47.20%), Query Frame = 0 
Query:   70 VKGAIIGSLL-------RNRRDAEEHVNRLS--ALDSYFLAIADMDVDDCGKKYVCEIEILDPSQRTTEEAMIATLFGDASLDPVSPKAEYDLAAYLGQTTRSKHACARRYKRCPVDRKTISQAF 185
            +KG IIG+L+         R     H  + S    +S  L+ +  D  DC KK VCE+  L      +EE MIA LF    LD      E+DLAA +G+    +  C+  Y+RCP  R+ +   F
Sbjct:   45 IKGGIIGALIARGXGRGGRRGGRNRHYGKRSIDEFESVLLSASQHDASDCAKKLVCEVSGLTLEDMNSEETMIARLFNPDHLDVTKATVEFDLAAQIGKRVGIQQ-CSVIYERCPHSRRQLIDIF 168
[Close]
BLAST of EMLSAG00000000512 vs. L. salmonis peptides
Match: EMLSAP00000007339 (pep:novel supercontig:LSalAtl2s:LSalAtl2s414:6177:7412:1 gene:EMLSAG00000007339 transcript:EMLSAT00000007339 description:"snap_masked-LSalAtl2s414-processed-gene-0.6")

HSP 1 Score: 64.6994 bits (156), Expect = 2.067e-13
Identity = 46/158 (29.11%), Postives = 64/158 (40.51%), Query Frame = 0 
Query:   53 TPAGIALGAAGLLGAAAVKGAIIGSLLRNRRDAEEHV-------------------------NRLSALDSYFLAIADMDVDDCGKKYVCEIEILDPSQRTTEEAMIATLFGDASLDPVSPKAEYDLAAYLGQTTRSKHACARRYKRCPVDRKTISQAF 185
            T  G AL    +L  AA+KG IIG+L+                                     +   +S  L+ +  D  DC KK VCE+  L      +EE MIA LF    LD      E+DLAA +G+    +  C+  Y+RCP  R+ +   F
Sbjct:   53 TIGGGALAGLAILKVAAIKGGIIGALIAXGXGRGGRRGGRRGGGRGGRRGGRRGGSLRYFGKRSIDDFESVLLSASQHDASDCAKKLVCEVSGLTLEDINSEETMIARLFNPDHLDVTKATVEFDLAAQIGKHVGIQQ-CSIIYQRCPHSRRKLIDIF 209
[Close]
BLAST of EMLSAG00000000512 vs. L. salmonis peptides
Match: EMLSAP00000012084 (pep:novel supercontig:LSalAtl2s:LSalAtl2s864:141096:141668:1 gene:EMLSAG00000012084 transcript:EMLSAT00000012084 description:"augustus_masked-LSalAtl2s864-processed-gene-0.1")

HSP 1 Score: 63.929 bits (154), Expect = 3.114e-13
Identity = 48/156 (30.77%), Postives = 68/156 (43.59%), Query Frame = 0 
Query:   57 IALGAAGLLGAAAVKGA-----IIGSLL------RN-------------RRDAEEHVNRLSALDSY---FLAIADMDVDDCGKKYVCEIEILDPSQRTTEEAMIATLFGDASLDPVSPKAEYDLAAYLGQTTRSKHACARRYKRCPVDRKTISQAF 185
            +A+G   L+G A +K A      +G L+      RN             R    ++     +LD Y    L+ A  D  DC K+ VCE+        + EE MIA LF    LD      E+DLAA +G+       CA  Y+RCP D+K + + F
Sbjct:   27 LAVGKGALIGLALIKKAAFKVGFVGGLISRGGRRRNYRPRYHQNFGYNHRHHGFQNYRFKRSLDEYETILLSAAQNDASDCAKRLVCEVNGTPLENFSKEETMIARLFNPDHLDITKITVEFDLAAQIGKRV-GIEQCAVLYERCPHDKKKLMEIF 181
[Close]
BLAST of EMLSAG00000000512 vs. L. salmonis peptides
Match: EMLSAP00000007148 (pep:novel supercontig:LSalAtl2s:LSalAtl2s402:845514:849311:1 gene:EMLSAG00000007148 transcript:EMLSAT00000007148 description:"maker-LSalAtl2s402-snap-gene-8.10")

HSP 1 Score: 61.2326 bits (147), Expect = 1.402e-11
Identity = 37/112 (33.04%), Postives = 61/112 (54.46%), Query Frame = 0 
Query:   82 RRDAEEHVNRLSALDSYFLAIADMDVDDCGKKYVCEIEILDPSQRTTEEAMIATLFGDAS----LDPVSPKAEYDLAAYLGQTTRSKHACARRYKRCPVDRKTISQAFIKNR 189
            +R AE     +   ++ F  +A +DV  CGK+ +CE+E  + ++   +E ++ +LFG  +     +P S KAEYDLAA LG  ++S+  C  RY  CP   + +  A  +N 
Sbjct:  349 KRXAELPRAIVPDPEAIFSLVASLDVHSCGKQLICELEAKNSTELEEDELLMLSLFGKNNKKMKYNPKSHKAEYDLAAELGLISKSQALCRSRYTDCPYTAEELMSALRQNN 460
[Close]
BLAST of EMLSAG00000000512 vs. L. salmonis peptides
Match: EMLSAP00000007336 (pep:novel supercontig:LSalAtl2s:LSalAtl2s414:24152:55376:1 gene:EMLSAG00000007336 transcript:EMLSAT00000007336 description:"maker-LSalAtl2s414-augustus-gene-0.14")

HSP 1 Score: 60.077 bits (144), Expect = 3.274e-11
Identity = 35/110 (31.82%), Postives = 53/110 (48.18%), Query Frame = 0 
Query:   78 LLRNRRDAEEHVNRLSALDSYFLAIADMDVDDCGKKYVCEIEILDPSQRTTEEAMIATLFGDASLDPVSPKAEYDLAAYLGQTTRSKHACARRYKRCPVDRKTISQAFIK 187
            L R +R   E+       +   L+ +  D +DC K+ VCEI  L P+  + EE  IA++F    LD      E++LAA +G+       C   YKRCP  R  + + + K
Sbjct:  291 LFRGKRAINEY-------EEILLSSSQEDQNDCTKRLVCEISSLPPTAMSPEEIQIASVFNSNYLDISKATVEFELAAQIGKRV-GLEQCLVIYKRCPYPRAKLMEIYSK 392

HSP 2 Score: 59.6918 bits (143), Expect = 4.437e-11
Identity = 34/101 (33.66%), Postives = 49/101 (48.51%), Query Frame = 0 
Query:   78 LLRNRRDAEEHVNRLSALDSYFLAIADMDVDDCGKKYVCEIEILDPSQRTTEEAMIATLFGDASLDPVSPKAEYDLAAYLGQTTRSKHACARRYKRCPVDR 178
            L R +R   E+       +   L+ +  D +DC K+ VCEI  L P+  + EE  IA+ F    LD      E++LAA +G+       C+  YKRCP  R
Sbjct:   92 LFRGKRAINEY-------EEILLSASQEDQNDCAKRLVCEISSLPPTAMSLEEVQIASAFNSNYLDISKATVEFELAAQIGKRV-GLEQCSVIYKRCPFPR 184
[Close]
BLAST of EMLSAG00000000512 vs. L. salmonis peptides
Match: EMLSAP00000007341 (pep:novel supercontig:LSalAtl2s:LSalAtl2s414:99526:112093:-1 gene:EMLSAG00000007341 transcript:EMLSAT00000007341 description:"maker-LSalAtl2s414-snap-gene-1.9")

HSP 1 Score: 55.4546 bits (132), Expect = 3.001e-10
Identity = 29/87 (33.33%), Postives = 45/87 (51.72%), Query Frame = 0 
Query:   99 FLAIADMDVDDCGKKYVCEIEILDPSQRTTEEAMIATLFGDASLDPVSPKAEYDLAAYLGQTTRSKHACARRYKRCPVDRKTISQAF 185
             L+ +  D +DC K+ VCEI  L P+  + EE  IA+ F    LD      E++LAA +G+    +  C   YKRCP  +  + + +
Sbjct:   90 LLSASQEDQNDCAKRLVCEISSLPPTAMSPEEIQIASAFNSNYLDISKATVEFELAAQIGKRVGLEQ-CLVIYKRCPHSKAKLMEIY 175
[Close]
BLAST of EMLSAG00000000512 vs. Select Arthropod Genomes
Match: EFX75455.1 (hypothetical protein DAPPUDRAFT_306813 [Daphnia pulex])

HSP 1 Score: 50.447 bits (119), Expect = 4.609e-7
Identity = 38/135 (28.15%), Postives = 61/135 (45.19%), Query Frame = 0 
Query:   60 GAAGLLGAAAVKGAIIGSLLRNRRDAEEHVNRLSAL-----DSYFLAIADMDVDDCGKKYVCEIEILDPSQ-RTTEEAMIATLFGDASLDP------VSPKAEYDLAAYLG-QTTRSKHACARRYKRCPVDRKTI 181
            GAAGL   A     + G  +RNRR      ++ S L     ++  L +A  D   CG + +CE+   +P+Q   T    +  +F D    P        PKA +  AA++G ++ ++   CA+ +  CP   K I
Sbjct:   52 GAAGLTTLAGSVDFVTGLPIRNRRSQHGFRSKRSELGFEIDEAMVLEVAATDESGCGARLLCELHQEEPNQLNGTISRRLVQIF-DGQQAPNFEQLRTEPKAAFQYAAFVGSKSVKNLKICAQVFNHCPFSAKII 185
[Close]
BLAST of EMLSAG00000000512 vs. nr
Match: gi|155966149|gb|ABU41029.1| (hypothetical protein [Lepeophtheirus salmonis])

HSP 1 Score: 60.4622 bits (145), Expect = 4.080e-8
Identity = 34/94 (36.17%), Postives = 54/94 (57.45%), Query Frame = 0 
Query:   99 FLAIADMDVDDCGKKYVCEIEILDPSQRTTEEAMIATLFGDAS----LDPVSPKAEYDLAAYLGQTTRSKHACARRYKRCPVDRKTISQAFIKN 188
            F  +A +DV  CGK+ +CE+E  + ++   +E ++ +LFG  +     +P S KAEYDLAA LG  ++S+  C  RY  CP   + +  A  +N
Sbjct:   93 FSLVASLDVHSCGKQLICELEAKNSTELEEDELLMLSLFGKNNKKMKYNPKSHKAEYDLAAELGLISKSQALCRSRYTDCPYTAEELMSALRQN 186
[Close]
BLAST of EMLSAG00000000512 vs. Tigriopus kingsejongenis genes
Match: maker-scaffold197_size267318-snap-gene-1.35 (protein:Tk09461 transcript:maker-scaffold197_size267318-snap-gene-1.35-mRNA-1 annotation:"hypothetical protein")

HSP 1 Score: 86.6557 bits (213), Expect = 2.019e-21
Identity = 60/151 (39.74%), Postives = 76/151 (50.33%), Query Frame = 0 
Query:   47 TSTVFATPAG----IALGAAGLLGAAAVKGAIIGSLLRNRRDAEE---------HVNRLSA------LDSYFLAIADMDVDDCGKKYVCEIEILDPSQRTTEEAMIATLFGDAS---LDPVSPKAEYDLAAYLGQTTRSKHACARRYKRCP 175
            T+   ATP      I LGAA L+    V    +GSL     D EE         H  R SA       D+ F  I+ MD   CGK+ VCE+E  D  Q   +E++I +LFGD     L+  S KAEY+LAA LGQ T+S+  C +RY  CP
Sbjct:   67 TAGTLATPLAVLGLIKLGAAALIAGGFVA---LGSLRGRNNDDEEVYHESSSGYHRRRRSADIAAPNPDALFALISSMDTHGCGKQLVCELEAKDARQLQGDESLILSLFGDKQKKGLNVASAKAEYELAAQLGQITKSQVMCRQRYTTCP 214
[Close]
BLAST of EMLSAG00000000512 vs. Tigriopus kingsejongenis genes
Match: maker-scaffold39_size501901-snap-gene-2.7 (protein:Tk00983 transcript:maker-scaffold39_size501901-snap-gene-2.7-mRNA-1 annotation:"glutamate ionotropic kainate 2")

HSP 1 Score: 53.5286 bits (127), Expect = 7.537e-9
Identity = 31/89 (34.83%), Postives = 47/89 (52.81%), Query Frame = 0 
Query:   92 LSALDSYFLAIADMDVDDCGKKYVCEIEILDPSQRTTEEAMIATLFGDASLDPVSPKA-EYDLAAYLGQTTRSKHACARRYKRCPVDRK 179
            +S+++  FL  + +D DDC K  VC I        + EE +IA +FG      VS  + E+DLAA +G+   +   C   Y RCP ++K
Sbjct:   77 VSSIEDSFLQASLVDADDCAKMLVCLINSAPAEDLSEEEEIIAEMFGQNDEINVSKSSVEFDLAALVGRKAGASQ-CKSLYARCPHNQK 164

HSP 2 Score: 52.7582 bits (125), Expect = 1.231e-8
Identity = 30/85 (35.29%), Postives = 45/85 (52.94%), Query Frame = 0 
Query:   92 LSALDSYFLAIADMDVDDCGKKYVCEIEILDPSQRTTEEAMIATLFGDASLDPVSPKA-EYDLAAYLGQTTRSKHACARRYKRCP 175
            +++++  FLA +  D DDC KK VC +   D    T  E  +  +FG + +  VS  + E+DLAA +G+   S   C   Y RCP
Sbjct:  249 VNSVEDAFLAASVDDADDCAKKMVCMVYAKDQESLTDVEQALVEMFGQSEVIDVSKSSVEFDLAALVGRKVGSLQ-CKSVYARCP 332
The following BLAST results are available for this feature:
BLAST of EMLSAG00000000512 vs. GO
Analysis Date: 2014-04-02 (Blast vs. GO)
Total hits: 0
Match NameE-valueIdentityDescription
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BLAST of EMLSAG00000000512 vs. C. finmarchicus
Analysis Date: 2014-05-09 (TblastN vs C. finmarchicus TSA)
Total hits: 20
Match NameE-valueIdentityDescription
gi|592854055|gb|GAXK01103489.1|4.819e-1746.91TSA: Calanus finmarchicus comp61937_c0_seq1 transc... [more]
gi|592833102|gb|GAXK01124442.1|7.625e-1437.74TSA: Calanus finmarchicus comp24536_c0_seq1 transc... [more]
gi|592935479|gb|GAXK01023074.1|2.758e-1035.29TSA: Calanus finmarchicus comp114460_c1_seq1 trans... [more]
gi|592774535|gb|GAXK01180033.1|8.991e-935.71TSA: Calanus finmarchicus comp1833751_c0_seq1 tran... [more]
gi|592944920|gb|GAXK01013633.1|3.240e-833.33TSA: Calanus finmarchicus comp8347_c0_seq1 transcr... [more]
gi|592774534|gb|GAXK01180034.1|3.798e-831.31TSA: Calanus finmarchicus comp1833751_c0_seq2 tran... [more]
gi|592926123|gb|GAXK01032308.1|4.601e-633.00TSA: Calanus finmarchicus comp21077_c1_seq1 transc... [more]
gi|592830700|gb|GAXK01126844.1|2.782e-534.72TSA: Calanus finmarchicus comp47414_c0_seq3 transc... [more]
gi|592835767|gb|GAXK01121777.1|4.245e-534.72TSA: Calanus finmarchicus comp107205_c3_seq2 trans... [more]
gi|592835768|gb|GAXK01121776.1|5.065e-534.72TSA: Calanus finmarchicus comp107205_c3_seq1 trans... [more]

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BLAST of EMLSAG00000000512 vs. L. salmonis peptides
Analysis Date: 2014-05-10 (Blastp vs. self)
Total hits: 9
Match NameE-valueIdentityDescription
EMLSAP000000005121.407e-137100.00pep:novel supercontig:LSalAtl2s:LSalAtl2s107:49355... [more]
EMLSAP000000038716.845e-2135.43pep:novel supercontig:LSalAtl2s:LSalAtl2s20:890516... [more]
EMLSAP000000120834.723e-1739.66pep:novel supercontig:LSalAtl2s:LSalAtl2s864:10512... [more]
EMLSAP000000120851.556e-1333.60pep:novel supercontig:LSalAtl2s:LSalAtl2s864:16517... [more]
EMLSAP000000073392.067e-1329.11pep:novel supercontig:LSalAtl2s:LSalAtl2s414:6177:... [more]
EMLSAP000000120843.114e-1330.77pep:novel supercontig:LSalAtl2s:LSalAtl2s864:14109... [more]
EMLSAP000000071481.402e-1133.04pep:novel supercontig:LSalAtl2s:LSalAtl2s402:84551... [more]
EMLSAP000000073363.274e-1131.82pep:novel supercontig:LSalAtl2s:LSalAtl2s414:24152... [more]
EMLSAP000000073413.001e-1033.33pep:novel supercontig:LSalAtl2s:LSalAtl2s414:99526... [more]
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BLAST of EMLSAG00000000512 vs. SwissProt
Analysis Date: 2017-02-10 (Blastp vs. SwissProt)
Total hits: 0
Match NameE-valueIdentityDescription
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BLAST of EMLSAG00000000512 vs. Select Arthropod Genomes
Analysis Date: 2017-02-20 (Blastp vs. Selected Arthropods)
Total hits: 1
Match NameE-valueIdentityDescription
EFX75455.14.609e-728.15hypothetical protein DAPPUDRAFT_306813 [Daphnia pu... [more]
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BLAST of EMLSAG00000000512 vs. nr
Analysis Date: 2017-02-20 (Blastp vs. NR (2/2017))
Total hits: 1
Match NameE-valueIdentityDescription
gi|155966149|gb|ABU41029.1|4.080e-836.17hypothetical protein [Lepeophtheirus salmonis][more]
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BLAST of EMLSAG00000000512 vs. Tigriopus kingsejongenis genes
Analysis Date: 2018-04-18 (Blastp vs. Tigriopus kingsejongensis proteins)
Total hits: 2
Match NameE-valueIdentityDescription
maker-scaffold197_size267318-snap-gene-1.352.019e-2139.74protein:Tk09461 transcript:maker-scaffold197_size2... [more]
maker-scaffold39_size501901-snap-gene-2.77.537e-934.83protein:Tk00983 transcript:maker-scaffold39_size50... [more]
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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
LSalAtl2s107supercontigLSalAtl2s107:493556..498566 +
Analyses
This gene is derived from or has results from the following analyses
Analysis NameDate Performed
ensembl2013-09-26 .965016
Blast vs. GO2014-04-02
TblastN vs C. finmarchicus TSA2014-05-09
Blastp vs. self2014-05-10
Blastp vs. SwissProt2017-02-10
Blastp vs. Selected Arthropods2017-02-20
Blastp vs. NR (2/2017)2017-02-20
Blastp vs. Tigriopus kingsejongensis proteins2018-04-18
Properties
Property NameValue
Logic nameensemblgenomes
Descriptionmaker-LSalAtl2s107-snap-gene-5.72
Biotypeprotein_coding
EvidenceIEA
NoteHypothetical protein
Cross References
External references for this gene
DatabaseAccession
Ensembl Metazoa (gene)EMLSAG00000000512 (primary cross-reference)
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameSpeciesType
EMLSAT00000000512EMLSAT00000000512-696359Lepeophtheirus salmonismRNA


Sequences
The following sequences are available for this feature:

gene from alignment at LSalAtl2s107:493556..498566+

Legend: mRNA
Hold the cursor over a type above to highlight its positions in the sequence below.
>EMLSAG00000000512-683278 ID=EMLSAG00000000512-683278|Name=EMLSAG00000000512|organism=Lepeophtheirus salmonis|type=gene|length=5011bp|location=Sequence derived from alignment at LSalAtl2s107:493556..498566+ (Lepeophtheirus salmonis)
ATGCTTGGTTTGGTAGGTAGATACAACTTATAAATCAGACGTCTGATCAT
ACACCATATCTTTTTTTTAAATAAAATGTATACAACTATGTCAAAAAGGG
TTTCGAAGTTTTTAAAATAGGTAAATGCCTACATTTGACACAATTACCCC
ACTAACACAAAAATTTACATGATATTTTACAGGCTTGTTGTACGGAGTTT
TTTTTGATCGACAATCAATTATGATATGACGATATTTTATTGCTGATCGA
AGTATCGCAATCGGTCGTAATCTTTACATCGCAACAATAATAGAAATATA
ATTGCGATCCGATTAATTGATGAGGATTAGACAGAGACKGAGAGACGATA
MCTTTGAGAASCAGCCAATAATCATCCAATAAATGTCCAATAAAGAGCTA
GAAGAGAAATTAATTATGTATATATTTTATTATTTGCCGGTAGACTACAC
TTAATTTTTTTTCTACATACTTTTTATTTTTTTAATGTTGCAAAATATTG
CAAATAACTATATTTGAAACAGGTGTATAAATCGATAATTTAAGATATAT
AAATATATATAGTTTTAGTAATAGGCTTAAAGAAATTGTGTATTTGAATA
TGATCGCAATCAAATTAATTTCATCTCTCGCTCGGTCCTGCATAATATTC
AAGAGCGTTCTAAAGTACTCCATGCCTATTTTTTCCTCACTCCTCATCCA
ACACAAAAGAGCACCAACACACAATTGTAAGTCCTTGTTGGACTCGGAGA
ATAATTGAAGATCGGCGTTGGAGGAATTCTTGCCCCTGTCCATGTTTATT
TCCTTCTCGCTCTCTTCTCTTGTTACAGCTGATCGTAGCTCATCTAATGA
AACATCATGACGGCTAAGTGGCTCTATTCCAAAATATTCTTCAAATAGTC
CGGATTNNNNNNTCGTAATTTTTTTCCTGATCCCTCACTAGCCATGTTAA
TGTATCTGCTTCTTTTACATTTATCAGTATTTTGAACGTTGAATCGAAGA
ATTACAATTAGATGTAGGTAAGGTCTAAACAATTACAAAAATAACTAAGT
AATAACTCTATAGTGAGAAAGAATTTCTTTACTTCCAATGAAAAAAGTCG
AAAAATTAAMAAATTGCAATTGTTTTCAAAAATCCATCCCTACTAAAGGA
AAATTATTTTTTTTCGAAAAGTATTTGAAAAATTAAACTTTTTGAGAAAC
AAATTTCGAAAATTAAATTTCAATTATTAAATTTTTGCGATGTATTTCAA
AGATCTATAGTTACTCACAGAAAAGCTATTTTCTCAAAAATACATTACTA
TTCACAAAAAATTAATTAATTTGGAAAAAAAATTCGAATATTAAATTTTT
GAAATTTTTTTTTGTACAAGGTAAATTCATCCCAAATTAGGGAAGGAACT
ACAATTTTTTTGGATATAAATAAATCAGCTGTTCTAAACAACAACAAAAA
TTATTTTGTTGACAATAGTTTTTAACTATAAACTCCTGAAAAAATGTATT
TGAATCGTCAAACACAAAAAAGCAAAAAAATCCCAGTAATAATCTATAAA
ACAAAAGAAATTAAGGATTTTCTCGAACAATAATGAAGAGAACACATCAT
AAAAACGATNCAAGGCTCTGCAAGATTATCAAGGTCATCCATAAATTTTT
TTTCTAACAAAAACGTTAACAAAAATTAACATAAAATATCTTTTTTTAAA
AACATCATGATAAATTCGCAAAAAATGTGTTTTCTAGGAAAAAAATAAAA
AAAAGTTTAAAATAGAAACATTTTGGACCCAAATATGGGGCCAAAATTAG
ATATTCCCTCCCAAAATAACTAAGGACTCCGCAGACATAAATGAGTTCAG
AATCAGTGCAAGATAATAAAGGTTTTGCTATGCATCTTTCAAAAACATAG
ATTCCTTACAGAAAGTATCGTTCAAGTTGTGTGAGTTAATGAAATACATA
ATGAAAAGGAAATTTCAAATAAGTGATAAATTAAAATGTTGTCATTTTAG
TTTGATAGTTTCTTGACTGGTCATTTCATGTTTATTAATTAATATGTGCT
TATAATAGTTCAGAACATAAATGAATGAGTATATTATATATTTTTGCAAC
ACAATGACTTTTTTTAGATAAAAATAATACTAACAGAAGATGTAGATGTC
TATCTTCTTTTAAAAATAGAAAATATTAATTAATTACATACCTTTAAAAG
CAGCAAGCTTACGACTTACTTAATAAATAGTGTTAATGATTTTTAGCATT
TTGGCATGTTAATAATAAAGAAACAAAAAATCAACATGGTAAACCTGACA
AGTGTAAGAATGTTTTGAAGGAGAACAGCTTATCTGTCATGATGTTTCAT
TAGATCAGGTACCATACATATGTGACAAAGGGGAAAGAGAAGAAAATAAA
AAAAAAATTACTCCGATGTCGATCTTTAATTCTACTAAGTCTAAAAAGGA
CTTACTATTATTTACTCTTCAGAATTTCAATAATAATTATTTGKAATTTT
GGAAAAGAAAAGAACAGACAGTTTTCAGGTTGTTAACTCAAAAAAAAAAA
CAAAAAAAACTGCGAGCTAAAAAATACTAACGATTAACATTTTTACAAAT
AATTATTGATAGGGTTAAATTCTTCTATCCAGTGAAAAAACATAGTCCTT
TGTAGGATTGGCCATTTCGGGAAGCGCAAAGAGAAGGCGGGAGCGAAACA
TATGGTACTACTGAATTAAGATCCTTGTTTTGAATTGTTATCATAATATA
AAAATATATACTTCATATTTGAGTATGGAAAAAGAAAAAAGGAGATAGAC
TTTAAAAAATTGACCATTTAAAAGAAAATGCCATTTCAAAAATATACATC
AATCAATATTACTTTCTAAAAAAGTCATTAAAGGAAATATGGACACGATT
TATATAAAAGACCAAAAGAAGGCATTATTTTTTATCGAAAATATGTCATT
CAATAAGTATTACAAAATATTTATTAAGAAAGGAAAAATATTTTATTTGA
AAGAAAAAGGCATTGCATTTTTTCATCATATTAGAGTCGAACAAAAAAAA
AAGATGTCAGTGGGAAAATTTGATGAAAAAGAAATCATTCCTAATTTTTC
AAAGACAATCATAGCGACGCCCCTAATATAACTTTCAAACTCCATATATG
CAGACACGTGTGTGTGCCTTGCACTTAAAAGTAAAATAAAGCCCATTCAC
ATTTAGAAAATTTAAAAAATCTAAATTGCATGAATGCATTTATCGTACTT
TGATTCTGTTTTGAATATTTTATAGCAGATTTTTGTTTGGCTTATCTCAT
TATCATGCATTGCAGGGATATAGTAGAGGTATTAGCGAAAATTATTGACA
TTTATTAAAAGAGTGAGGAAATCAATCACAGACCTGATCCATATTCAAAA
ATAGTAGGTGGTGTCAATTAAGTCATCACTAACTAACTGCATTAATATTG
TATGTACGTATGTATGATATAGTTTAAATTTCTGCAATTGTTTTTAACTA
CATGGAAATTAAAAATGAATCTTGGATTAATCAGAATAATTTAAATTGTT
AAAGCTGATTATTCTAAATATTTATTTTTTTATTTGTAAATTATAAATCT
GGAGATGTACAATCTATAGAATCATAGAAACGAGTTGAAATATTTAAATA
AAGAAGTTTAAATTAACTAATATTGAAAAAACTCATTCAATTTTTATCCG
TTTAAATTTGAATTAAGTAGCTTGGAGTAAAACCGCTTTACGATTTAACC
TCAACATCTTTATATTATCATTTAGGATTGAAAGTTCCCTAGCAAATATA
AATATTCGTATTGTCAAATTAAAATAAGTCAAATGATTTTAAGTAACTAG
GTAAAAATCATAAATACAAGGATGATACCGTTAATGTCTTAAGGAGCCCC
TGGTTTTGTTAAAATACAATGACCGGTTCATGTACTTCATATGTACTTAC
AAATCCCGTGTCTTGTTTATTATTATTCTTCTTATTATAAACGCTTGCGC
CAGTTCTAATGAAGGTCATCTCTTGGTTTTGTTTTTTGATTAGGCGTATC
TGTTGGTCTAAAGTGTACATATAAATAGAAGGAGTATCATGGATCAAAGT
ATCAGTCCTTTGGAGTTTGTGAATTAAGCAACAATAGTTTACTCAAATCA
CCTAGGTGAGTATTTAATTATACTTAAATCAATAATTTAATCCATGAATT
TTATAACTATTTCTATTTTTTGAATGAACTATTTTAGCCAAAATGAACCA
AATGATCGCTTTCGTTTTTGCCTCATGCATGGTTGCATCAGTCTATGGAA
TCTTTGATCCCATCTCTATCACTGGCCTCGCTACTGGAGGCGCTGCAGMT
GCATTAGGAACCTCAACCGTCTTTGCTACCCCAGCAGGTATTGCCCTTGG
TGCAGCTGGTCTCCTTGGAGCTGCTGCTGTTAAAGGTGCTATCATTGGAT
CCCTACTTAGAAATCGTCGTGATGCCGAAGAACATGTTAATCGTCTCTCT
GCCCTTGACTCATACTTCTTGGCCATTGCCGATATGGACGTGGATGACTG
TGGAAAGAAATACGTTTGTGAAATTGAGATCTTGGATCCCTCACAAAGAA
CCACAGAGGAAGCTATGATTGCTACCCTCTTTGGGGATGCTTCTTTGGAT
CCTGTATCCCCCAAGGCTGAATATGACTTGGCAGCTTACTTAGGMCAAAC
TACACGATCCAAACATGCCTGTGCTCGTCGGTACAAGAGATGTCCCGTGG
ATCGTAAAACCATTTCTCAAGCTTTCATCAAGAATAGACAATAAGAAGGG
GAAACTCAATAGTCAATTCTATTGATTTTTCTACCTTTTTAATGTTTATA
TTTTTTTACTTTTTCCACCTTATTTCGCCTGTKCCTGCCAAAGTTTTATT
TCTTGTTCATTCCTACTTTTATCTATTATGTAAACCATGCATATGTTGCT
AGAACGATAATCAAAATATATAGATTTATATAAAATTATCTCATTATATT
TATTTCAAATG
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