EMLSAG00000000727, EMLSAG00000000727-683493 (gene) Lepeophtheirus salmonis
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Overview
Associated RNAi Experiments
Nothing found Homology
BLAST of EMLSAG00000000727 vs. L. salmonis peptides
Match: EMLSAP00000000727 (pep:novel supercontig:LSalAtl2s:LSalAtl2s1116:12706:13290:1 gene:EMLSAG00000000727 transcript:EMLSAT00000000727 description:"augustus_masked-LSalAtl2s1116-processed-gene-0.2") HSP 1 Score: 286.574 bits (732), Expect = 6.214e-100 Identity = 149/149 (100.00%), Postives = 149/149 (100.00%), Query Frame = 0
Query: 1 MKILMILGFLLGSSFGSQYQHPLHSYPSPVFPYHLTPPSQFFASRQPFLHSNSHPVPYPFPIQTSTPGPIVVVTPVPVFLSPDSIFNSHRDIFSSDSNTGTNFNKGQFGNNFLNGKVQSTSSTSSPSRFNNPFSNQSPNNKIISSYSSN 149
MKILMILGFLLGSSFGSQYQHPLHSYPSPVFPYHLTPPSQFFASRQPFLHSNSHPVPYPFPIQTSTPGPIVVVTPVPVFLSPDSIFNSHRDIFSSDSNTGTNFNKGQFGNNFLNGKVQSTSSTSSPSRFNNPFSNQSPNNKIISSYSSN
Sbjct: 1 MKILMILGFLLGSSFGSQYQHPLHSYPSPVFPYHLTPPSQFFASRQPFLHSNSHPVPYPFPIQTSTPGPIVVVTPVPVFLSPDSIFNSHRDIFSSDSNTGTNFNKGQFGNNFLNGKVQSTSSTSSPSRFNNPFSNQSPNNKIISSYSSN 149
BLAST of EMLSAG00000000727 vs. L. salmonis peptides
Match: EMLSAP00000001219 (pep:novel supercontig:LSalAtl2s:LSalAtl2s11:2555:3002:-1 gene:EMLSAG00000001219 transcript:EMLSAT00000001219 description:"maker-LSalAtl2s11-augustus-gene-0.13") HSP 1 Score: 158.688 bits (400), Expect = 6.499e-50 Identity = 95/132 (71.97%), Postives = 108/132 (81.82%), Query Frame = 0
Query: 1 MKILMILGFLLGSSFGSQYQHPLHSYPSPVFPYHLTPPSQFFASRQPFLHSNSHPVPYPFPIQTSTPGPIVVVTPVPVFLSPDSIFNSHRDIFSSDSNTGTNF-NKGQFGNNFLNGKVQSTSSTSSPSRFNN 131
MKILMILG LLGS+F S+YQHPL YPSP +P SQF+AS+QPF SNSHPV YPFP QTSTP PI+V TP+PVF++PDS+FNS RD FSS SNTG NF N+GQFGNNFLNGKVQSTS T +PSRF+N
Sbjct: 1 MKILMILGLLLGSTFASEYQHPLLPYPSPFYPSQ----SQFYASQQPFFRSNSHPVLYPFPTQTSTPRPIIVATPIPVFVTPDSLFNSQRDTFSSGSNTGNNFNNEGQFGNNFLNGKVQSTSFTRTPSRFDN 128
BLAST of EMLSAG00000000727 vs. L. salmonis peptides
Match: EMLSAP00000000728 (pep:novel supercontig:LSalAtl2s:LSalAtl2s1116:7767:8695:1 gene:EMLSAG00000000728 transcript:EMLSAT00000000728 description:"maker-LSalAtl2s1116-snap-gene-0.9") HSP 1 Score: 157.147 bits (396), Expect = 1.913e-49 Identity = 94/108 (87.04%), Postives = 97/108 (89.81%), Query Frame = 0
Query: 1 MKILMILGFLLGSSFGSQYQHPLHSYPSPVFPYHLTPPSQFFASRQPFLHSNSHPVPYPFPIQTSTPGPIVVVTPVPVFLSPDSIFNSHRDIFSSDSNTGTNFNKGQF 108
MKILMILGF+LGSSFGSQYQHPLHSYPSPVFPYHL PSQF+ASRQ F H NSHPVPYPFPIQTSTPGPIVVVTPVPVFLSPDSIFNS RD FSS+S TG NFN GQ
Sbjct: 1 MKILMILGFILGSSFGSQYQHPLHSYPSPVFPYHLGSPSQFYASRQQFHHFNSHPVPYPFPIQTSTPGPIVVVTPVPVFLSPDSIFNSQRDTFSSNSKTGNNFNNGQL 108
BLAST of EMLSAG00000000727 vs. L. salmonis peptides
Match: EMLSAP00000001218 (pep:novel supercontig:LSalAtl2s:LSalAtl2s11:21782:22338:-1 gene:EMLSAG00000001218 transcript:EMLSAT00000001218 description:"maker-LSalAtl2s11-augustus-gene-0.14") HSP 1 Score: 140.584 bits (353), Expect = 2.095e-42 Identity = 79/146 (54.11%), Postives = 99/146 (67.81%), Query Frame = 0
Query: 19 YQHPLHSYPSPVFPYHLTPPSQFFASRQPFLHSNSHPVPYPF----------------PIQTSTPGPIVVVTPVPVFLSPDSIFNSHRDIFSS-DSNTGTNFNKGQFGNNFLNGKVQSTSSTSSPSRFNNPFSNQSPNNKIISSYS 147
YQHPLHSYP P +P H TP S+F+ SR SNS+PVP+ F PIQTST PI++ TPVPVF++P+S+FNS RDIFS S+ GTN QFGN+FL GKVQS SST +P+R +N SN+ PNN+I++SYS
Sbjct: 19 YQHPLHSYPGPFYPSHFTPQSEFYTSRHLLPQSNSYPVPHQFHQSNSHPVPYPVPYPVPIQTSTSVPIIIATPVPVFITPNSLFNSQRDIFSKGSSDIGTNIKSAQFGNSFLIGKVQSXSSTRTPTRLDNKSSNRFPNNQIVTSYS 164
BLAST of EMLSAG00000000727 vs. L. salmonis peptides
Match: EMLSAP00000001230 (pep:novel supercontig:LSalAtl2s:LSalAtl2s11:54372:55068:1 gene:EMLSAG00000001230 transcript:EMLSAT00000001230 description:"augustus_masked-LSalAtl2s11-processed-gene-0.1") HSP 1 Score: 139.813 bits (351), Expect = 5.916e-42 Identity = 104/174 (59.77%), Postives = 123/174 (70.69%), Query Frame = 0
Query: 1 MKILMILGFLLGSSFGSQYQHPLHSYPSPVFPYHLTPPSQFFASRQPFLH------------SNSHPVP------------YPFPIQTSTPGPIVVVTPVPVFLSPDSIFNSHRDIF-SSDSNTGTNFNKGQFGNNFLNGKVQSTSSTSSPSRFNNPFSNQSPNNKIISSYSSN 149
MKIL++LGFLL SS GS Y+H L+SYPSP +P HLTP S+F+ SR PFLH SNSHPVP YP PIQTSTP PI+VVTPVPVF++PDS+FNS R+ F SS SN+GTN N GQFGNN LNGKV STS T +PSRF+N S+Q PN++I+S Y N
Sbjct: 1 MKILIVLGFLLDSSLGSGYRHHLNSYPSPFYPSHLTPQSEFYTSRHPFLHSNNHLMLHQFHQSNSHPVPQTFHHSNSHPFLYPVPIQTSTPKPIIVVTPVPVFVTPDSLFNSQRETFSSSSSNSGTNLNNGQFGNNLLNGKVHSTSFTPTPSRFDNNSSDQFPNDQILSPYYHN 174 The following BLAST results are available for this feature:
BLAST of EMLSAG00000000727 vs. GO
Analysis Date: 2014-04-02 (Blast vs. GO) Total hits: 0
BLAST of EMLSAG00000000727 vs. C. finmarchicus
Analysis Date: 2014-05-09 (TblastN vs C. finmarchicus TSA) Total hits: 0
BLAST of EMLSAG00000000727 vs. L. salmonis peptides
Analysis Date: 2014-05-10 (Blastp vs. self) Total hits: 5
BLAST of EMLSAG00000000727 vs. SwissProt
Analysis Date: 2017-02-10 (Blastp vs. SwissProt) Total hits: 0
BLAST of EMLSAG00000000727 vs. Select Arthropod Genomes
Analysis Date: 2017-02-20 (Blastp vs. Selected Arthropods) Total hits: 0
BLAST of EMLSAG00000000727 vs. nr
Analysis Date: 2017-02-20 (Blastp vs. NR (2/2017)) Total hits: 0
BLAST of EMLSAG00000000727 vs. Tigriopus kingsejongenis genes
Analysis Date: 2018-04-18 (Blastp vs. Tigriopus kingsejongensis proteins) Total hits: 0
Alignments
The following features are aligned
Analyses
This gene is derived from or has results from the following analyses
Properties
Cross References
External references for this gene
Relationships
The following mRNA feature(s) are a part of this gene:
Sequences
The following sequences are available for this feature:
gene from alignment at LSalAtl2s1116:12706..13290+ Legend: mRNA Hold the cursor over a type above to highlight its positions in the sequence below.>EMLSAG00000000727-683493 ID=EMLSAG00000000727-683493|Name=EMLSAG00000000727|organism=Lepeophtheirus salmonis|type=gene|length=585bp|location=Sequence derived from alignment at LSalAtl2s1116:12706..13290+ (Lepeophtheirus salmonis)back to top Add to Basket
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