EMLSAG00000002108, EMLSAG00000002108-684874 (gene) Lepeophtheirus salmonis
Overview
Associated RNAi Experiments
Nothing found Homology
BLAST of EMLSAG00000002108 vs. L. salmonis peptides
Match: EMLSAP00000002108 (pep:novel supercontig:LSalAtl2s:LSalAtl2s1398:446:3406:1 gene:EMLSAG00000002108 transcript:EMLSAT00000002108 description:"maker-LSalAtl2s1398-augustus-gene-0.8") HSP 1 Score: 291.967 bits (746), Expect = 3.890e-102 Identity = 143/143 (100.00%), Postives = 143/143 (100.00%), Query Frame = 0 Query: 1 MYTGLSTIKESAYSINYGSCQDKFVNSFFLSSPTKSEIMMFPKIHKLVDQSNELSKNEIEMINALRNSLVESVRQLITSLKSQIAEIQSMRCHRLKKVLNFMQNLFYIGQSDETELQEFATELQYFVNEINIELECLSRKTHL 143 MYTGLSTIKESAYSINYGSCQDKFVNSFFLSSPTKSEIMMFPKIHKLVDQSNELSKNEIEMINALRNSLVESVRQLITSLKSQIAEIQSMRCHRLKKVLNFMQNLFYIGQSDETELQEFATELQYFVNEINIELECLSRKTHL Sbjct: 1 MYTGLSTIKESAYSINYGSCQDKFVNSFFLSSPTKSEIMMFPKIHKLVDQSNELSKNEIEMINALRNSLVESVRQLITSLKSQIAEIQSMRCHRLKKVLNFMQNLFYIGQSDETELQEFATELQYFVNEINIELECLSRKTHL 143
BLAST of EMLSAG00000002108 vs. L. salmonis peptides
Match: EMLSAP00000002948 (pep:novel supercontig:LSalAtl2s:LSalAtl2s1696:22493:22980:-1 gene:EMLSAG00000002948 transcript:EMLSAT00000002948 description:"maker-LSalAtl2s1696-augustus-gene-0.5") HSP 1 Score: 116.701 bits (291), Expect = 1.435e-33 Identity = 56/126 (44.44%), Postives = 88/126 (69.84%), Query Frame = 0 Query: 17 YGSCQDKFVNSFFLSSPTKSEIMMFPKIHKLVDQSNELSKNEIEMINALRNSLVESVRQLITSLKSQIAEIQSMRCHRLKKVLNFMQNLFYIGQSDETELQEFATELQYFVNEINIELECLSRKTH 142 Y +C D+F N+ FLS+PT+ E++M + LV+ SNEL+KNE EM+ AL+N+L+ SV L+ +L+ +I +IQ +RC+ +K +Q F+ Q DE EL+ F++ELQYF++ IN L+C+S K + Sbjct: 18 YSTCPDEFSNASFLSNPTRMELLM-SRAQTLVEGSNELNKNEYEMLAALKNTLLSSVHDLVNALEEEITKIQELRCNTIKHAFEAIQERFHSMQPDENELKNFSSELQYFIDGINSSLDCVSNKKY 142
BLAST of EMLSAG00000002108 vs. L. salmonis peptides
Match: EMLSAP00000000699 (pep:novel supercontig:LSalAtl2s:LSalAtl2s110:56299:56785:-1 gene:EMLSAG00000000699 transcript:EMLSAT00000000699 description:"maker-LSalAtl2s110-augustus-gene-0.3") HSP 1 Score: 107.842 bits (268), Expect = 3.863e-30 Identity = 54/140 (38.57%), Postives = 93/140 (66.43%), Query Frame = 0 Query: 1 MYTGLSTIKESAYSINYGSCQDKFVNSFFLSSPTKSEIMMFPKIHKLVDQSNELSKNEIEMINALRNSLVESVRQLITSLKSQIAEIQSMRCHRLKKVLNFMQNLFYIGQSDETELQEFATELQYFVNEINIELECLSRK 140 M G+ + + +Y +C D+F N+ FLSSPT+ E++M ++ LV QSNELSKNE+EM+ ALR +L+ SV ++I++++++I + Q +RC+ +K +Q+ F + DE ELQ F++ELQ F+ +I+ +C+ + Sbjct: 1 MSRGMDCNLDMKLNQSYSACPDEFGNASFLSSPTRMELLM-TRVQTLVQQSNELSKNEMEMLKALRATLLYSVEEMISAIEAEITKNQDLRCNTIKHAQQIIQDRFRSIKPDEDELQGFSSELQLFIQDIDTFQDCVPGR 139
BLAST of EMLSAG00000002108 vs. L. salmonis peptides
Match: EMLSAP00000011944 (pep:novel supercontig:LSalAtl2s:LSalAtl2s846:177909:178785:1 gene:EMLSAG00000011944 transcript:EMLSAT00000011944 description:"maker-LSalAtl2s846-augustus-gene-0.6") HSP 1 Score: 107.071 bits (266), Expect = 6.725e-30 Identity = 53/140 (37.86%), Postives = 94/140 (67.14%), Query Frame = 0 Query: 1 MYTGLSTIKESAYSINYGSCQDKFVNSFFLSSPTKSEIMMFPKIHKLVDQSNELSKNEIEMINALRNSLVESVRQLITSLKSQIAEIQSMRCHRLKKVLNFMQNLFYIGQSDETELQEFATELQYFVNEINIELECLSRK 140 M G+ + + +Y +C D+F N+ FLSSPT+ E++M ++ LV QSNELSKNE+EM+ ALR++L+ V ++I++++++I + Q +RC+ +K +Q+ F+ + DE ELQ F++ELQ F+ +I+ +C+ + Sbjct: 1 MSRGIDCNLDMKLNQSYSACPDEFGNASFLSSPTRMELLM-TRVQTLVQQSNELSKNEMEMLQALRSTLLFCVEEMISAIEAEITKNQDLRCNTIKHAQKIIQDRFHSIKPDEDELQGFSSELQLFIQDIDTFQDCVPGR 139
BLAST of EMLSAG00000002108 vs. L. salmonis peptides
Match: EMLSAP00000001584 (pep:novel supercontig:LSalAtl2s:LSalAtl2s1274:95760:96281:-1 gene:EMLSAG00000001584 transcript:EMLSAT00000001584 description:"maker-LSalAtl2s1274-augustus-gene-0.24") HSP 1 Score: 106.301 bits (264), Expect = 2.118e-29 Identity = 52/125 (41.60%), Postives = 89/125 (71.20%), Query Frame = 0 Query: 16 NYGSCQDKFVNSFFLSSPTKSEIMMFPKIHKLVDQSNELSKNEIEMINALRNSLVESVRQLITSLKSQIAEIQSMRCHRLKKVLNFMQNLFYIGQSDETELQEFATELQYFVNEINIELECLSRK 140 +Y +C D+F N+ FLSSPT+ E++M + LV+QSNELSKNE+EMI AL+++LV V +I+S+++++ + Q +RC+ +K V +Q+ F+ + DE EL+ F++ELQ F ++I+ +C+ + Sbjct: 27 SYSACPDEFGNASFLSSPTRLELLM-TRAQSLVNQSNELSKNEMEMIQALKSTLVSCVEDMISSIETEMTKNQDLRCNTIKHVQEIIQDRFHSIKPDEDELKGFSSELQLFFHDIDTFQDCVPGR 150
BLAST of EMLSAG00000002108 vs. L. salmonis peptides
Match: EMLSAP00000001316 (pep:novel supercontig:LSalAtl2s:LSalAtl2s1222:82149:82639:-1 gene:EMLSAG00000001316 transcript:EMLSAT00000001316 description:"maker-LSalAtl2s1222-augustus-gene-0.7") HSP 1 Score: 105.145 bits (261), Expect = 4.337e-29 Identity = 51/140 (36.43%), Postives = 92/140 (65.71%), Query Frame = 0 Query: 1 MYTGLSTIKESAYSINYGSCQDKFVNSFFLSSPTKSEIMMFPKIHKLVDQSNELSKNEIEMINALRNSLVESVRQLITSLKSQIAEIQSMRCHRLKKVLNFMQNLFYIGQSDETELQEFATELQYFVNEINIELECLSRK 140 M G+S + + +Y C D+F N+ FLS+PT+ E++M ++ LV QSNELSKNE+EM+ ALR +L+ V ++I +++++I + Q +RC+ +K +Q+ F+ + DE EL+ F++ELQ F+ +++ +C+ + Sbjct: 1 MSRGMSCNLDLKLNQSYSQCPDEFGNASFLSNPTRLELLM-SRVQTLVQQSNELSKNEMEMLQALRATLISCVEEMIAAIEAEITKNQDLRCNTIKNAQKIIQDRFHSIKPDEDELKGFSSELQLFIRDVDTFQDCVPGR 139 The following BLAST results are available for this feature:
BLAST of EMLSAG00000002108 vs. GO
Analysis Date: 2014-04-02 (Blast vs. GO) Total hits: 0
BLAST of EMLSAG00000002108 vs. C. finmarchicus
Analysis Date: 2014-05-09 (TblastN vs C. finmarchicus TSA) Total hits: 0
BLAST of EMLSAG00000002108 vs. L. salmonis peptides
Analysis Date: 2014-05-10 (Blastp vs. self) Total hits: 6
BLAST of EMLSAG00000002108 vs. SwissProt
Analysis Date: 2017-02-10 (Blastp vs. SwissProt) Total hits: 0
BLAST of EMLSAG00000002108 vs. Select Arthropod Genomes
Analysis Date: 2017-02-20 (Blastp vs. Selected Arthropods) Total hits: 0
BLAST of EMLSAG00000002108 vs. nr
Analysis Date: 2017-02-20 (Blastp vs. NR (2/2017)) Total hits: 0
BLAST of EMLSAG00000002108 vs. Tigriopus kingsejongenis genes
Analysis Date: 2018-04-18 (Blastp vs. Tigriopus kingsejongensis proteins) Total hits: 0
Alignments
The following features are aligned
Analyses
This gene is derived from or has results from the following analyses
Properties
Cross References
External references for this gene
Relationships
The following mRNA feature(s) are a part of this gene:
Sequences
The following sequences are available for this feature:
gene from alignment at LSalAtl2s1398:446..3406+ Legend: mRNA Hold the cursor over a type above to highlight its positions in the sequence below.>EMLSAG00000002108-684874 ID=EMLSAG00000002108-684874|Name=EMLSAG00000002108|organism=Lepeophtheirus salmonis|type=gene|length=2961bp|location=Sequence derived from alignment at LSalAtl2s1398:446..3406+ (Lepeophtheirus salmonis)back to top Add to Basket
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