EMLSAG00000005911, EMLSAG00000005911-688677 (gene) Lepeophtheirus salmonis

Overview
NameEMLSAG00000005911
Unique NameEMLSAG00000005911-688677
Typegene
OrganismLepeophtheirus salmonis (salmon louse)
Associated RNAi Experiments

Nothing found

Homology
[Close]
BLAST of EMLSAG00000005911 vs. C. finmarchicus
Match: gi|592932378|gb|GAXK01026175.1| (TSA: Calanus finmarchicus comp18158_c1_seq5 transcribed RNA sequence)

HSP 1 Score: 77.0258 bits (188), Expect = 1.367e-17
Identity = 40/100 (40.00%), Postives = 57/100 (57.00%), Query Frame = 0 
Query:    4 LIVLSSFLLIGVLLSKSEAQTVLKAAAPASTSINDCFCQCSSLTFRDRNNRVNGNCRTT-FQGAQWCYITDEAARNGDCPDAQPSRRQPGKQWSFFSCAT 102
              +++ F+   +L S + + T  K    AS+   +C CQCSSLTFRD  N + GNC+T    GAQWCY+    + +  C D  PS+R P   WS+ +CAT
Sbjct:   25 FTLVTMFIFFTILASMALSTTYSKTLNKASSPYTNCGCQCSSLTFRDSANIIQGNCKTVDSTGAQWCYV---DSSHSSCQDLVPSQRFPHNPWSYEACAT 315
[Close]
BLAST of EMLSAG00000005911 vs. C. finmarchicus
Match: gi|592932381|gb|GAXK01026172.1| (TSA: Calanus finmarchicus comp18158_c1_seq2 transcribed RNA sequence)

HSP 1 Score: 79.7221 bits (195), Expect = 1.605e-17
Identity = 41/103 (39.81%), Postives = 59/103 (57.28%), Query Frame = 0 
Query:    4 LIVLSSFLLIGVLLSKSEAQTVLKAAAPASTSINDCFCQCSSLTFRDRNNRVNGNCRTT-FQGAQWCYITDEAARNGDCPDAQPSRRQPGKQWSFFSCATPTV 105
              +++ F+   +L S + + T  K    AS+   +C CQCSSLTFRD  N + GNC+T    GAQWCY+    + +  C D  PS+R P   WS+ +CATP +
Sbjct:   25 FTLVTMFIFFTILASMALSTTYSKTLNKASSPYTNCGCQCSSLTFRDSANIIQGNCKTVDSTGAQWCYVD---SSHSSCQDLVPSQRFPHNPWSYEACATPAL 324
[Close]
BLAST of EMLSAG00000005911 vs. C. finmarchicus
Match: gi|592932367|gb|GAXK01026186.1| (TSA: Calanus finmarchicus comp18158_c2_seq11 transcribed RNA sequence)

HSP 1 Score: 77.0258 bits (188), Expect = 7.049e-17
Identity = 42/105 (40.00%), Postives = 60/105 (57.14%), Query Frame = 0 
Query:    1 MNSLIVLSSFLLIGVLLSKSEAQTVLKAAAPASTSINDCFCQCSSLTFRDRNNRVNGNC-RTTFQGAQWCYITDEAARNGDCPD-AQPSRRQPGKQWSFFSCATP 103
            M  L+ +S+FL++  L   +E+         A++   +C CQCS+LTF+D+    +GNC R    GAQWCY+     R G C D +  S R PGK WS+ +CATP
Sbjct:  148 MKLLVTISTFLIL--LAPTAESVKTTDTNTKAASPYTNCGCQCSNLTFKDKYGNTHGNCKRVDHTGAQWCYVD---PRQGSCQDLSYTSTRFPGKPWSYEACATP 447
[Close]
BLAST of EMLSAG00000005911 vs. C. finmarchicus
Match: gi|592932369|gb|GAXK01026184.1| (TSA: Calanus finmarchicus comp18158_c2_seq9 transcribed RNA sequence)

HSP 1 Score: 77.0258 bits (188), Expect = 7.760e-17
Identity = 42/105 (40.00%), Postives = 60/105 (57.14%), Query Frame = 0 
Query:    1 MNSLIVLSSFLLIGVLLSKSEAQTVLKAAAPASTSINDCFCQCSSLTFRDRNNRVNGNC-RTTFQGAQWCYITDEAARNGDCPD-AQPSRRQPGKQWSFFSCATP 103
            M  L+ +S+FL++  L   +E+         A++   +C CQCS+LTF+D+    +GNC R    GAQWCY+     R G C D +  S R PGK WS+ +CATP
Sbjct:  148 MKLLVTISTFLIL--LAPTAESVKTTDTNTKAASPYTNCGCQCSNLTFKDKYGNTHGNCKRVDHTGAQWCYVD---PRQGSCQDLSYTSTRFPGKPWSYEACATP 447
[Close]
BLAST of EMLSAG00000005911 vs. C. finmarchicus
Match: gi|592956547|gb|GAXK01002009.1| (TSA: Calanus finmarchicus comp90527_c0_seq20 transcribed RNA sequence)

HSP 1 Score: 76.2554 bits (186), Expect = 1.883e-16
Identity = 47/113 (41.59%), Postives = 63/113 (55.75%), Query Frame = 0 
Query:    1 MNSLIVLSSFLLIGVLLSKSEAQTVLK---AAAPASTSINDCFCQCSSLTFRDRNNRVNGNCRTT-FQGAQWCYITDEAARNGDCPDAQPSRRQPGKQWSFFSCATPTVRQCV 109
            M+S+I L+ FL+I  L S    +  LK   AAAPA      C CQCSSL ++D+   V GNCR+     A+WCY+ + +     C D  PS R P   WS+ +CATP+  QC 
Sbjct:  135 MSSMISLAVFLMI--LSSSLAGRGSLKLRGAAAPA------CGCQCSSLVWQDKYGDVQGNCRSADHTKAKWCYVKEGST----CSDLVPSARHPRNPWSYQACATPSQGQCA 437
[Close]
BLAST of EMLSAG00000005911 vs. C. finmarchicus
Match: gi|592956545|gb|GAXK01002011.1| (TSA: Calanus finmarchicus comp90527_c0_seq22 transcribed RNA sequence)

HSP 1 Score: 75.0998 bits (183), Expect = 4.269e-16
Identity = 47/113 (41.59%), Postives = 63/113 (55.75%), Query Frame = 0 
Query:    1 MNSLIVLSSFLLIGVLLSKSEAQTVLK---AAAPASTSINDCFCQCSSLTFRDRNNRVNGNCRTT-FQGAQWCYITDEAARNGDCPDAQPSRRQPGKQWSFFSCATPTVRQCV 109
            M+S+I L+ FL+I  L S    +  LK   AAAPA      C CQCSSL ++D+   V GNCR+     A+WCY+ + +     C D  PS R P   WS+ +CATP+  QC 
Sbjct:  135 MSSMISLAVFLMI--LSSSLAGRGSLKLRGAAAPA------CGCQCSSLVWQDKYGDVQGNCRSADHTKAKWCYVKEGST----CSDLVPSARHPRNPWSYQACATPSQGQCA 437
[Close]
BLAST of EMLSAG00000005911 vs. C. finmarchicus
Match: gi|592956556|gb|GAXK01002000.1| (TSA: Calanus finmarchicus comp90527_c0_seq11 transcribed RNA sequence)

HSP 1 Score: 77.0258 bits (188), Expect = 4.642e-16
Identity = 47/113 (41.59%), Postives = 63/113 (55.75%), Query Frame = 0 
Query:    1 MNSLIVLSSFLLIGVLLSKSEAQTVLK---AAAPASTSINDCFCQCSSLTFRDRNNRVNGNCRTT-FQGAQWCYITDEAARNGDCPDAQPSRRQPGKQWSFFSCATPTVRQCV 109
            M+S+I L+ FL+I  L S    +  LK   AAAPA      C CQCSSL ++D+   V GNCR+     A+WCY+ + +     C D  PS R P   WS+ +CATP+  QC 
Sbjct:  135 MSSMISLAVFLMI--LSSSLAGRGSLKLRGAAAPA------CGCQCSSLVWQDKYGDVQGNCRSADHTKAKWCYVKEGS----TCSDLVPSARHPRNPWSYQACATPSQGQCA 437
[Close]
BLAST of EMLSAG00000005911 vs. C. finmarchicus
Match: gi|592956561|gb|GAXK01001995.1| (TSA: Calanus finmarchicus comp90527_c0_seq6 transcribed RNA sequence)

HSP 1 Score: 77.0258 bits (188), Expect = 4.778e-16
Identity = 47/113 (41.59%), Postives = 63/113 (55.75%), Query Frame = 0 
Query:    1 MNSLIVLSSFLLIGVLLSKSEAQTVLK---AAAPASTSINDCFCQCSSLTFRDRNNRVNGNCRTT-FQGAQWCYITDEAARNGDCPDAQPSRRQPGKQWSFFSCATPTVRQCV 109
            M+S+I L+ FL+I  L S    +  LK   AAAPA      C CQCSSL ++D+   V GNCR+     A+WCY+ + +     C D  PS R P   WS+ +CATP+  QC 
Sbjct:  135 MSSMISLAVFLMI--LSSSLAGRGSLKLRGAAAPA------CGCQCSSLVWQDKYGDVQGNCRSADHTKAKWCYVKEGS----TCSDLVPSARHPRNPWSYQACATPSQGQCA 437
[Close]
BLAST of EMLSAG00000005911 vs. C. finmarchicus
Match: gi|592956565|gb|GAXK01001991.1| (TSA: Calanus finmarchicus comp90527_c0_seq2 transcribed RNA sequence)

HSP 1 Score: 77.0258 bits (188), Expect = 4.845e-16
Identity = 47/113 (41.59%), Postives = 63/113 (55.75%), Query Frame = 0 
Query:    1 MNSLIVLSSFLLIGVLLSKSEAQTVLK---AAAPASTSINDCFCQCSSLTFRDRNNRVNGNCRTT-FQGAQWCYITDEAARNGDCPDAQPSRRQPGKQWSFFSCATPTVRQCV 109
            M+S+I L+ FL+I  L S    +  LK   AAAPA      C CQCSSL ++D+   V GNCR+     A+WCY+ + +     C D  PS R P   WS+ +CATP+  QC 
Sbjct:  135 MSSMISLAVFLMI--LSSSLAGRGSLKLRGAAAPA------CGCQCSSLVWQDKYGDVQGNCRSADHTKAKWCYVKEGS----TCSDLVPSARHPRNPWSYQACATPSQGQCA 437
[Close]
BLAST of EMLSAG00000005911 vs. C. finmarchicus
Match: gi|592956551|gb|GAXK01002005.1| (TSA: Calanus finmarchicus comp90527_c0_seq16 transcribed RNA sequence)

HSP 1 Score: 76.6406 bits (187), Expect = 5.146e-16
Identity = 47/113 (41.59%), Postives = 63/113 (55.75%), Query Frame = 0 
Query:    1 MNSLIVLSSFLLIGVLLSKSEAQTVLK---AAAPASTSINDCFCQCSSLTFRDRNNRVNGNCRTT-FQGAQWCYITDEAARNGDCPDAQPSRRQPGKQWSFFSCATPTVRQCV 109
            M+S+I L+ FL+I  L S    +  LK   AAAPA      C CQCSSL ++D+   V GNCR+     A+WCY+ + +     C D  PS R P   WS+ +CATP+  QC 
Sbjct:  135 MSSMISLAVFLMI--LSSSLAGRGSLKLRGAAAPA------CGCQCSSLVWQDKYGDVQGNCRSADHTKAKWCYVKEGST----CSDLVPSARHPRNPWSYQACATPSQGQCA 437
[Close]
BLAST of EMLSAG00000005911 vs. L. salmonis peptides
Match: EMLSAP00000007122 (pep:novel supercontig:LSalAtl2s:LSalAtl2s401:64891:74089:-1 gene:EMLSAG00000007122 transcript:EMLSAT00000007122 description:"maker-LSalAtl2s401-augustus-gene-0.13")

HSP 1 Score: 54.299 bits (129), Expect = 4.577e-10
Identity = 37/104 (35.58%), Postives = 57/104 (54.81%), Query Frame = 0 
Query:    6 VLSSFLLIGVLLSKSEAQTV-LKAAAPASTSINDCFCQCSSLTFRDRNNRVNGNCRTTFQ-GAQWCYITDEAARNGDCPDAQPSRRQPG----KQWSFFSCATP 103
            ++  FL+I V+++ + AQ + LKA + A     +C CQCS+  FRD      GNC +  + GA+WCY+     R   C D + S R+      +Q S+ +CATP
Sbjct:   99 MICKFLIISVVVALTSAQDITLKAPSLAV----NCGCQCSNYIFRDLRGITQGNCNSADRTGAKWCYVD----RGHTCQDTRGSGRKDQFGRRRQISYEACATP 194

HSP 2 Score: 46.595 bits (109), Expect = 2.609e-7
Identity = 31/87 (35.63%), Postives = 47/87 (54.02%), Query Frame = 0 
Query:    6 VLSSFLLIGVLLSKSEAQTV-LKAAAPASTSINDCFCQCSSLTFRDRNNRVNGNCRTTFQ-GAQWCYITDEAARNGDCPDAQPSRRQ 90
            ++   L+I V+++ + AQ + LKA + A     +C CQCS+  FRD      GNC +  Q GA+WCY+     R   C D + S R+
Sbjct:    1 MICKILIISVVVALTSAQDITLKAPSLAV----NCGCQCSNYIFRDLRGITQGNCNSADQTGAKWCYVD----RGHTCQDTRGSGRR 79
[Close]
BLAST of EMLSAG00000005911 vs. L. salmonis peptides
Match: EMLSAP00000002406 (pep:novel supercontig:LSalAtl2s:LSalAtl2s145:1581187:1602244:-1 gene:EMLSAG00000002406 transcript:EMLSAT00000002406 description:"maker-LSalAtl2s145-augustus-gene-16.13")

HSP 1 Score: 53.5286 bits (127), Expect = 4.677e-10
Identity = 27/93 (29.03%), Postives = 44/93 (47.31%), Query Frame = 0 
Query:   12 LIGVLLSKSEAQTVLKAAAPASTSINDCFCQCSSLTFRDRNNRVNGNCRTTFQGAQWCYITDEAARNGDCPDAQPSRRQPGKQWSFFSCATPT 104
            L+G+ +     +        +  S  +C CQC  L + DR   ++GNC +T  GA WCY+  +  ++  C D   S     + WS+ +C TP 
Sbjct:   28 LVGIAIGTECKRKSKLYHKDSRGSHRNCLCQCIPLQYVDRKGIMHGNCTSTNDGALWCYV--KYQKSSPCGDLVKSDIFQDRYWSYHACTTPV 118
[Close]
BLAST of EMLSAG00000005911 vs. L. salmonis peptides
Match: EMLSAP00000002890 (pep:novel supercontig:LSalAtl2s:LSalAtl2s166:445712:450389:1 gene:EMLSAG00000002890 transcript:EMLSAT00000002890 description:"maker-LSalAtl2s166-augustus-gene-4.9")

HSP 1 Score: 53.1434 bits (126), Expect = 6.020e-10
Identity = 29/67 (43.28%), Postives = 38/67 (56.72%), Query Frame = 0 
Query:   38 DCFCQCSSLTFRDRNNRVNGNCRTT-FQGAQWCYITDEAARNGDCPDAQPSRRQPGKQWSFFSCATP 103
            +C CQC+S TF D      GNC ++ F G +WCY+         C DA PS R  G QWS+ +C+TP
Sbjct:   33 NCGCQCNSYTFSDIKGYTQGNCFSSDFTGGRWCYVD----YGNTCHDAVPSLRYNG-QWSYEACSTP 94
[Close]
BLAST of EMLSAG00000005911 vs. L. salmonis peptides
Match: EMLSAP00000007117 (pep:novel supercontig:LSalAtl2s:LSalAtl2s401:30551:49956:-1 gene:EMLSAG00000007117 transcript:EMLSAT00000007117 description:"maker-LSalAtl2s401-augustus-gene-0.12")

HSP 1 Score: 53.9138 bits (128), Expect = 9.693e-10
Identity = 41/108 (37.96%), Postives = 58/108 (53.70%), Query Frame = 0 
Query:    2 NSLIVLSSFLLIGVLLSKSEAQTV-LKAAAPASTSINDCFCQCSSLTFRDRNNRVNGNCRTTFQ-GAQWCYITDEAARNGDCPDAQPSRR--QPG--KQWSFFSCATP 103
            NS  ++   L+I V+++ + AQ + LKA + A     +C CQCS+  FRD      GNC +  Q GA+WCY+     R   C D   S R  Q G  +Q S+ +CATP
Sbjct:   52 NSAKMICKILIISVVVALTSAQDITLKAPSLAV----NCGCQCSNYIFRDLRGITQGNCNSADQTGAKWCYVD----RGHTCQDTIGSARNDQFGRRRQISYEACATP 151
[Close]
BLAST of EMLSAG00000005911 vs. L. salmonis peptides
Match: EMLSAP00000006141 (pep:novel supercontig:LSalAtl2s:LSalAtl2s335:388935:390297:1 gene:EMLSAG00000006141 transcript:EMLSAT00000006141 description:"maker-LSalAtl2s335-snap-gene-4.14")

HSP 1 Score: 50.447 bits (119), Expect = 9.378e-9
Identity = 37/107 (34.58%), Postives = 55/107 (51.40%), Query Frame = 0 
Query:   10 FLLIGVLLS------KSEAQTVLKAAAPASTSINDCFCQCSSLTFRDRNNRVNGNCRTTFQ-GAQWCYITDEAARNGDCPDAQPSRR-----QPGKQWSFFSCATPT 104
            +L +G+LL         +   +LKAA    +S  +C CQC++  F+D+  R  GNC T  + GA+WCY++    R   C D   S R     QP ++ S  +CATP 
Sbjct:    2 YLKLGILLVVCACAIAQKNDIILKAA----SSRTNCGCQCNNYIFKDKYGRTQGNCNTADKSGAKWCYVS----RGNTCNDVTYSSRKDERGQP-RRISNEACATPV 99
[Close]
BLAST of EMLSAG00000005911 vs. L. salmonis peptides
Match: EMLSAP00000012322 (pep:novel supercontig:LSalAtl2s:LSalAtl2s8:1311290:1311781:1 gene:EMLSAG00000012322 transcript:EMLSAT00000012322 description:"augustus_masked-LSalAtl2s8-processed-gene-15.4")

HSP 1 Score: 47.7506 bits (112), Expect = 5.978e-8
Identity = 41/110 (37.27%), Postives = 61/110 (55.45%), Query Frame = 0 
Query:    6 VLSSFLLIGVLLSKSEAQTV-LKAAAPASTSINDCFCQCSSLTFRDRNNRVNGNCRTTFQ-GAQWCYITDEAARNGD-CPDAQPSRRQPGKQWSFFSCATPTVRQCVNNF 112
            +++  +L+  L++   +Q + LKA    S +IN C CQC S  FRDR  +  GNCR+T + GA+WC++     R G+ C D    R   G+  S  +CATP   +C N F
Sbjct:    1 MIAKIILLSALVAYVTSQGITLKAP---SLAIN-CGCQCDSFIFRDRFGQTQGNCRSTDRSGARWCFV-----RPGNTCTDTSFFR---GRTISNEACATP---RCGNIF 95
[Close]
BLAST of EMLSAG00000005911 vs. nr
Match: gi|155966304|gb|ABU41105.1| (hypothetical protein [Lepeophtheirus salmonis])

HSP 1 Score: 69.3218 bits (168), Expect = 1.996e-12
Identity = 37/93 (39.78%), Postives = 54/93 (58.06%), Query Frame = 0 
Query:   11 LLIGVLLSKSEAQTVLKAAAPAST-SINDCFCQCSSLTFRDRNNRVNGNCRTTFQGAQWCYITDEAARNGDCPDAQPSRRQPGKQWSFFSCAT 102
            + IG++L+     +  +  APA   S  DC CQC +L+F D   +  GNCR+TF GAQWCY+ ++   +  CPD + S R  GK +S  +C T
Sbjct:    4 IYIGIVLATCVYWSNAQQFAPAPINSQADCQCQCIALSFYDEYGQQQGNCRSTFNGAQWCYVENDGYSS--CPDLKRSTRYRGKYYSNHACIT 94
[Close]
BLAST of EMLSAG00000005911 vs. Tigriopus kingsejongenis genes
Match: maker-scaffold82_size396747-snap-gene-2.41 (protein:Tk06844 transcript:maker-scaffold82_size396747-snap-gene-2.41-mRNA-1 annotation:"hypothetical protein")

HSP 1 Score: 58.5362 bits (140), Expect = 3.552e-11
Identity = 30/82 (36.59%), Postives = 45/82 (54.88%), Query Frame = 0 
Query:   28 AAAPASTSINDCFCQCSSLTFRDRNNRVNGNCRTTFQGAQWCYITDEAARNGDCPDAQPSRRQPGKQWSFFSCATPTVRQCV 109
            A A +  + + C CQC++ TF+  +N ++GNC   ++GA WCY+ D       C D   S R  G  WSF +C TP  + C+
Sbjct:  238 AKAQSEITQDVCDCQCNNYTFK-FDNTLHGNCLQPYKGALWCYVKDFGQST--CIDRLESSRVSGLFWSFQACGTPKYQDCL 316
[Close]
BLAST of EMLSAG00000005911 vs. Tigriopus kingsejongenis genes
Match: maker-scaffold381_size190066-snap-gene-0.30 (protein:Tk01607 transcript:maker-scaffold381_size190066-snap-gene-0.30-mRNA-1 annotation:"hypothetical protein AN3340.2")

HSP 1 Score: 54.299 bits (129), Expect = 5.145e-10
Identity = 38/128 (29.69%), Postives = 65/128 (50.78%), Query Frame = 0 
Query:    1 MNSLIVLSSFLLIGVLL-SKSEAQ--------TVLKAAAPASTSINDCFCQCSSLTFRDRNNRVNGNCRTTFQ-GAQWCYITDEAARNGDCPDAQPSRRQPG-----KQWSFFSCATP--TVRQCVNN 111
            M    +LS+ L +  L  ++ EA+         +L+ A     S   C CQC + T++  +N+++GNC +  Q  A+WCY+   +   G+C D Q S+ +       ++WS+ +C+TP     QC NN
Sbjct:    1 MKVFCILSTVLALTALTQAQDEAEDGVDTKSVEILQKAPSNQVS---CNCQCDNYTYKGGDNQIHGNCFSADQTKAKWCYVDQYS---GECDDIQYSKNRRDSHGNLRKWSYQACSTPERASHQCRNN 122
[Close]
BLAST of EMLSAG00000005911 vs. Tigriopus kingsejongenis genes
Match: maker-scaffold381_size190066-snap-gene-0.31 (protein:Tk01605 transcript:maker-scaffold381_size190066-snap-gene-0.31-mRNA-1 annotation:"hypothetical protein")

HSP 1 Score: 50.8322 bits (120), Expect = 9.745e-9
Identity = 38/114 (33.33%), Postives = 57/114 (50.00%), Query Frame = 0 
Query:    4 LIVLSSFLLIGVLLSKSEAQTVLKAAA------PASTSINDCFCQCSSLTFRDRNNRVNGNCRTT-FQGAQWCYITDEAARNGDCPDAQPSRRQPG-----KQWSFFSCATPTV 105
            +I LS   L+G+L   S   T  + A        A +++ +C CQC   T+RD   RV GNCR+     A WCYI   A  +  C D + SR +       ++WS+ +C+TP +
Sbjct:    7 MIQLSILGLMGLLALVSSQITDTQVAESGDIVLKAPSNLINCGCQCDPYTWRDTLGRVQGNCRSADATKALWCYIPASAFTS--CADIRQSRNRLDNFGRPRRWSYEACSTPAL 118
[Close]
BLAST of EMLSAG00000005911 vs. Tigriopus kingsejongenis genes
Match: maker-scaffold381_size190066-snap-gene-0.32 (protein:Tk01608 transcript:maker-scaffold381_size190066-snap-gene-0.32-mRNA-1 annotation:"---NA---")

HSP 1 Score: 49.2914 bits (116), Expect = 4.071e-8
Identity = 24/73 (32.88%), Postives = 41/73 (56.16%), Query Frame = 0 
Query:   39 CFCQCSSLTFRDRNNRVNGNCRTT-FQGAQWCYITDEAARNGDCPDAQPSRRQPG-----KQWSFFSCATPTV 105
            C CQC + T++  +N+++GNC T      +WCY+      N DC D Q S+ +       ++WS+ +C+TP +
Sbjct:   47 CNCQCDNYTYKGDDNQIHGNCFTADHTRGKWCYLD---QYNNDCDDIQYSKNRRDSFGNLREWSYQACSTPQL 116
The following BLAST results are available for this feature:
BLAST of EMLSAG00000005911 vs. GO
Analysis Date: 2014-04-02 (Blast vs. GO)
Total hits: 0
Match NameE-valueIdentityDescription
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BLAST of EMLSAG00000005911 vs. C. finmarchicus
Analysis Date: 2014-05-09 (TblastN vs C. finmarchicus TSA)
Total hits: 25
Match NameE-valueIdentityDescription
gi|592932378|gb|GAXK01026175.1|1.367e-1740.00TSA: Calanus finmarchicus comp18158_c1_seq5 transc... [more]
gi|592932381|gb|GAXK01026172.1|1.605e-1739.81TSA: Calanus finmarchicus comp18158_c1_seq2 transc... [more]
gi|592932367|gb|GAXK01026186.1|7.049e-1740.00TSA: Calanus finmarchicus comp18158_c2_seq11 trans... [more]
gi|592932369|gb|GAXK01026184.1|7.760e-1740.00TSA: Calanus finmarchicus comp18158_c2_seq9 transc... [more]
gi|592956547|gb|GAXK01002009.1|1.883e-1641.59TSA: Calanus finmarchicus comp90527_c0_seq20 trans... [more]
gi|592956545|gb|GAXK01002011.1|4.269e-1641.59TSA: Calanus finmarchicus comp90527_c0_seq22 trans... [more]
gi|592956556|gb|GAXK01002000.1|4.642e-1641.59TSA: Calanus finmarchicus comp90527_c0_seq11 trans... [more]
gi|592956561|gb|GAXK01001995.1|4.778e-1641.59TSA: Calanus finmarchicus comp90527_c0_seq6 transc... [more]
gi|592956565|gb|GAXK01001991.1|4.845e-1641.59TSA: Calanus finmarchicus comp90527_c0_seq2 transc... [more]
gi|592956551|gb|GAXK01002005.1|5.146e-1641.59TSA: Calanus finmarchicus comp90527_c0_seq16 trans... [more]

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BLAST of EMLSAG00000005911 vs. L. salmonis peptides
Analysis Date: 2014-05-10 (Blastp vs. self)
Total hits: 16
Match NameE-valueIdentityDescription
EMLSAP000000071224.577e-1035.58pep:novel supercontig:LSalAtl2s:LSalAtl2s401:64891... [more]
EMLSAP000000024064.677e-1029.03pep:novel supercontig:LSalAtl2s:LSalAtl2s145:15811... [more]
EMLSAP000000028906.020e-1043.28pep:novel supercontig:LSalAtl2s:LSalAtl2s166:44571... [more]
EMLSAP000000071179.693e-1037.96pep:novel supercontig:LSalAtl2s:LSalAtl2s401:30551... [more]
EMLSAP000000061419.378e-934.58pep:novel supercontig:LSalAtl2s:LSalAtl2s335:38893... [more]
EMLSAP000000123225.978e-837.27pep:novel supercontig:LSalAtl2s:LSalAtl2s8:1311290... [more]

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BLAST of EMLSAG00000005911 vs. SwissProt
Analysis Date: 2017-02-10 (Blastp vs. SwissProt)
Total hits: 0
Match NameE-valueIdentityDescription
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BLAST of EMLSAG00000005911 vs. Select Arthropod Genomes
Analysis Date: 2017-02-20 (Blastp vs. Selected Arthropods)
Total hits: 0
Match NameE-valueIdentityDescription
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BLAST of EMLSAG00000005911 vs. nr
Analysis Date: 2017-02-20 (Blastp vs. NR (2/2017))
Total hits: 1
Match NameE-valueIdentityDescription
gi|155966304|gb|ABU41105.1|1.996e-1239.78hypothetical protein [Lepeophtheirus salmonis][more]
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BLAST of EMLSAG00000005911 vs. Tigriopus kingsejongenis genes
Analysis Date: 2018-04-18 (Blastp vs. Tigriopus kingsejongensis proteins)
Total hits: 4
Match NameE-valueIdentityDescription
maker-scaffold82_size396747-snap-gene-2.413.552e-1136.59protein:Tk06844 transcript:maker-scaffold82_size39... [more]
maker-scaffold381_size190066-snap-gene-0.305.145e-1029.69protein:Tk01607 transcript:maker-scaffold381_size1... [more]
maker-scaffold381_size190066-snap-gene-0.319.745e-933.33protein:Tk01605 transcript:maker-scaffold381_size1... [more]
maker-scaffold381_size190066-snap-gene-0.324.071e-832.88protein:Tk01608 transcript:maker-scaffold381_size1... [more]
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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
LSalAtl2s31supercontigLSalAtl2s31:1336906..1338922 -
Analyses
This gene is derived from or has results from the following analyses
Analysis NameDate Performed
ensembl2013-09-26 .965016
Blast vs. GO2014-04-02
TblastN vs C. finmarchicus TSA2014-05-09
Blastp vs. self2014-05-10
Blastp vs. SwissProt2017-02-10
Blastp vs. Selected Arthropods2017-02-20
Blastp vs. NR (2/2017)2017-02-20
Blastp vs. Tigriopus kingsejongensis proteins2018-04-18
Properties
Property NameValue
Logic nameensemblgenomes
Descriptionmaker-LSalAtl2s31-augustus-gene-12.7
Biotypeprotein_coding
EvidenceIEA
Notehypothetical protein [Lepeophtheirus salmonis]
Cross References
External references for this gene
DatabaseAccession
Ensembl Metazoa (gene)EMLSAG00000005911 (primary cross-reference)
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameSpeciesType
EMLSAT00000005911EMLSAT00000005911-701758Lepeophtheirus salmonismRNA


Sequences
The following sequences are available for this feature:

gene from alignment at LSalAtl2s31:1336906..1338922-

Legend: mRNA
Hold the cursor over a type above to highlight its positions in the sequence below.
>EMLSAG00000005911-688677 ID=EMLSAG00000005911-688677|Name=EMLSAG00000005911|organism=Lepeophtheirus salmonis|type=gene|length=2017bp|location=Sequence derived from alignment at LSalAtl2s31:1336906..1338922- (Lepeophtheirus salmonis)
ATGAACTCTCTAATTGTTTTATCCTCCTTCCTCTTGATAGGAGTCCTCTT
ATCAAAGAGCGAGGCTCAAACGGTACTTAAAGCTGCTGCACCTGCCTCTA
CCAGCATCAATGACTGCTTCTGCCAATGCTCCAGCCTCACTTTCAGAGAC
AGAAATAATCGTGTGAATGGAAACTGTAGAACGTAATTACAACCAAATTT
TTATACAAATTTATTTACATATTATGTAAGCCAAAGGATTTTTGTTTGGA
GAAGTAAGGATATTGTTGTGTTTGTCCATATTTATTCGGTCCAGTTCAGT
CTTAGGATCGATCCTTAATCCTCCGTTAGCAAACTGGGATATTATACAGC
CCAGATTAGTAAAAATGATTATCATCCCTTGGGAAATACATTTTATCGGC
AATACTTTTCCGTATGTGCCAGAAACGTACATTAAATCATTTACAAGCAA
TTTTGTGTTTATCTTAATCATGTCCTGTCTAGGATTTATTAATATGTTTA
GCAATTTATAATCGAAGCTTCGTAAATTTAATTAAATGTTGTGCTGAAAA
TTCGTTCCTGAAGTTTTTCTTTCTGATTTTTAAGAATCTTCCTTTTTTAA
TTATGAGGAATGTAATACTGTGGCTCTTATCTTATATAATACACGCCACC
TCATGAAAATGATTATATTATAATTAAATTCCCAAAATGGGTATAAATTA
ATGAATAGAAGATATCATATTAAAAAAAATGGAATAATTGTATGTTTTAC
TACAAAAATAACAAATTATACCTTGTTAAAATTAATTAATTAATTAAAAA
GATGGATTAAATAGTTATAAAAATGTATAAAATTTAAAATACCAATTTTT
TTATTATGCTTCCACTATTTAACATGAAATTAAATACGTATTATTTTCGG
GGGTTCTTTTTATTCCAGATCACAAACTGCATAATAAAAACTATGTTCAC
TAACAAGGGGCTCATCATCTCGGTCCTTCGGAATGTCAGAACTAGAGCAA
ATAAATAAAAAAGTAGAACATTGAGGGACGTCCTCTTTGACCGAACTTTA
TAAGCTTTACAGAATTAACAGGACCAAACCAGAAACTAAACTGGACTTGA
CAGATATTTAACTATACGGGACTACAGTCGTCAGTCCCGTACAAGGACTC
AAGCAACATTAGGCAAGGAGAAGGGTCAGATTTTCATCGAGTGTAAGAGT
CAAATTTGTGATGTGTCATCATAAAAAAAAACCTCCAACAAAAAATTAGA
AAAGGATCCCAATCTATTTATTTAATTTAATATAAATCTACAGTCCAATA
TTTCATTGATATATTTGAATCAATTATAGGCTTTATTATTCCAATTATGG
GCATGAATTCCGATATCTAAGAATTTTAGATATAGTTTAGAACCTAAGAG
ACTTATATGGGACCAAATATGGTTCTTTTTAAATAAATCTATCATTATTT
CGTTCGTATATTGTGAGGGTCAACTATGACTACTTTAAGGGGAATTTGCA
GAATATCTTATGCTTTAATAAGAATAGTTTGTTCATAGAAATGGACAATG
AGAATACACATGTAGATAATTCATAATCTATTTTTATACAAATCATTCTG
GTGCTTACATTAATAGACGACATTTGGGCTTGGAGTTCATATGTTTTTTA
TGATCACTCTCTACATAATATATCTAACATTTTTGATTTACAGAACCTTT
CAAGGAGCACAATGGTGCTATATCACTGACGAGGCAGCTCGGAATGGAGA
CTGTCCTGATGCTCAACCATCAAGACGTCAACCTGGAAAACAATGGTCCT
TTTTCTCCTGTGCTACTCCTACGGTTCGCCAATGTGTCAATAACTTTTTG
GTAAGGGTTATTATCGTTGTTAAAAAAGATATATATAATTCGTATTTAAC
TAATTACAGAGTTCAGCCGGATGTAATGTTGCCTTTGGTGGAATTGGAAC
TAGAATCAATCTGAAGTCATCTTCTCCTCAAGCCTCCAGCATTGATAATG
ATCCTGATGCTCCTTAA
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