EMLSAG00000002890, EMLSAG00000002890-685656 (gene) Lepeophtheirus salmonis

Overview


Name	EMLSAG00000002890
Unique Name	EMLSAG00000002890-685656
Type	gene
Organism	Lepeophtheirus salmonis (salmon louse)

Associated RNAi Experiments

Nothing found

Homology

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BLAST of EMLSAG00000002890 vs. C. finmarchicus
Match: gi|592932380|gb|GAXK01026173.1| (TSA: Calanus finmarchicus comp18158_c1_seq3 transcribed RNA sequence)

HSP 1 Score: 85.1149 bits (209), Expect = 8.764e-20
Identity = 40/95 (42.11%), Postives = 59/95 (62.11%), Query Frame = 0

Query:    2 IKIQLIKTLVCMFLSMLNLTQGQLRSPSLYQNCGCQCNSYTFSDIKGYTQGNCFSSDFTGGRWCYVD-YGNTCHDAVPSLRY-NGQWSYEACSTP 94
            I +  +  L+ + L    L+  + ++ S + NCGCQC++ +F D  G  QGNC + D TG +WCYVD   ++C D VPS R+ +  WSYEAC+TP
Sbjct:  100 IMLTQVSILITLVLGATCLSVEKTKAASSFTNCGCQCSNLSFRDTSGIVQGNCKTVDGTGAQWCYVDSSSSSCQDLVPSERFPHNPWSYEACATP 384

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BLAST of EMLSAG00000002890 vs. C. finmarchicus
Match: gi|592906544|gb|GAXK01051831.1| (TSA: Calanus finmarchicus comp28981_c1_seq1 transcribed RNA sequence)

HSP 1 Score: 84.7297 bits (208), Expect = 1.086e-19
Identity = 47/93 (50.54%), Postives = 61/93 (65.59%), Query Frame = 0

Query:    6 LIKTLVCMFL-SMLN-LTQGQLRSPSLYQNCGCQCNSYTFSDIKGYTQGNCFSSDFTGGRWCYVDY-GNTCHDAVPSLRY-NGQWSYEACSTP 94
            ++  L+  FL +M+N LT  +  SP  Y N GCQC+S TF D  G+ QGNC S D TG +WCYVD+  ++C D V S R+ N  WSYEAC+TP
Sbjct:  383 ILPVLLSSFLLTMVNSLTVEKAASP--YTNIGCQCSSLTFIDSSGHIQGNCKSVDHTGAQWCYVDHLHSSCQDLVHSARFPNNPWSYEACATP 655

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BLAST of EMLSAG00000002890 vs. C. finmarchicus
Match: gi|592932379|gb|GAXK01026174.1| (TSA: Calanus finmarchicus comp18158_c1_seq4 transcribed RNA sequence)

HSP 1 Score: 83.9593 bits (206), Expect = 1.641e-19
Identity = 44/96 (45.83%), Postives = 60/96 (62.50%), Query Frame = 0

Query:    1 MIKIQLIKTLVCMFLSMLNLTQGQLRSPSLYQNCGCQCNSYTFSDIKGYTQGNCFSSDFTGGRWCYVD-YGNTCHDAVPSLRY-NGQWSYEACSTP 94
            + ++ +  TLV +  + L L   +  SP  + NCGCQC+S TF D  G  QGNC + D TG +WCYVD   ++C D VPS R+ +  WSYEAC+TP
Sbjct:   43 LTQVSIFATLV-LGATCLVLENQKAASP--FTNCGCQCSSLTFRDTSGTVQGNCKTVDGTGAQWCYVDSSSSSCQDLVPSERFPHNPWSYEACATP 321

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BLAST of EMLSAG00000002890 vs. C. finmarchicus
Match: gi|592932382|gb|GAXK01026171.1| (TSA: Calanus finmarchicus comp18158_c1_seq1 transcribed RNA sequence)

HSP 1 Score: 84.3445 bits (207), Expect = 3.713e-19
Identity = 40/95 (42.11%), Postives = 59/95 (62.11%), Query Frame = 0

Query:    2 IKIQLIKTLVCMFLSMLNLTQGQLRSPSLYQNCGCQCNSYTFSDIKGYTQGNCFSSDFTGGRWCYVD-YGNTCHDAVPSLRY-NGQWSYEACSTP 94
            I +  +  L+ + L    L+  + ++ S + NCGCQC++ +F D  G  QGNC + D TG +WCYVD   ++C D VPS R+ +  WSYEAC+TP
Sbjct:  100 IMLTQVSILITLVLGATCLSVEKTKAASSFTNCGCQCSNLSFRDTSGIVQGNCKTVDGTGAQWCYVDSSSSSCQDLVPSERFPHNPWSYEACATP 384

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BLAST of EMLSAG00000002890 vs. C. finmarchicus
Match: gi|592848676|gb|GAXK01108868.1| (TSA: Calanus finmarchicus comp296545_c0_seq1 transcribed RNA sequence)

HSP 1 Score: 82.4185 bits (202), Expect = 1.354e-18
Identity = 47/91 (51.65%), Postives = 57/91 (62.64%), Query Frame = 0

Query:   10 LVCMFLSM---LNLTQGQLRSPSLYQNCGCQCNSYTFSDIKGYTQGNCFSSDFTGGRWCYVD--YGNTCHDAVPSLRY-NGQWSYEACSTP 94
            LV +F SM   L LT  +  SP  Y NC CQC+S  F D  G  QGNC S+D TG RWCYVD  + ++C D   S+R+ N  WSYEAC+TP
Sbjct:  139 LVFLFFSMAACLRLTGPKAASP--YTNCDCQCSSLNFQDKYGRIQGNCNSADHTGARWCYVDSAHHSSCQDLHHSVRFPNNPWSYEACATP 405

HSP 2 Score: 79.7221 bits (195), Expect = 9.888e-18
Identity = 47/91 (51.65%), Postives = 56/91 (61.54%), Query Frame = 0

Query:   10 LVCMFLSM---LNLTQGQLRSPSLYQNCGCQCNSYTFSDIKGYTQGNCFSSDFTGGRWCYVD--YGNTCHDAVPSLRY-NGQWSYEACSTP 94
            LV +F SM   L LT  +  SP  Y NC CQC+S TF D  G  QGNC S+D TG RWCYVD  + ++C D   S R+    WSYEAC+TP
Sbjct:  461 LVFLFFSMATCLRLTGPKAASP--YTNCDCQCSSLTFQDKYGRIQGNCNSADHTGARWCYVDSAHHSSCQDLQHSARFPQNPWSYEACATP 727

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BLAST of EMLSAG00000002890 vs. C. finmarchicus
Match: gi|592848675|gb|GAXK01108869.1| (TSA: Calanus finmarchicus comp296545_c0_seq2 transcribed RNA sequence)

HSP 1 Score: 81.2629 bits (199), Expect = 1.425e-18
Identity = 47/91 (51.65%), Postives = 56/91 (61.54%), Query Frame = 0

Query:   10 LVCMFLSM---LNLTQGQLRSPSLYQNCGCQCNSYTFSDIKGYTQGNCFSSDFTGGRWCYVD--YGNTCHDAVPSLRY-NGQWSYEACSTP 94
            LV +F SM   L LT  +  SP  Y NC CQC+S TF D  G  QGNC S+D TG RWCYVD  + ++C D   S R+    WSYEAC+TP
Sbjct:  145 LVFLFFSMAACLRLTGPKAASP--YTNCDCQCSSLTFQDKYGRIQGNCNSADHTGARWCYVDSAHHSSCQDLHHSARFPQNPWSYEACATP 411

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BLAST of EMLSAG00000002890 vs. C. finmarchicus
Match: gi|592932381|gb|GAXK01026172.1| (TSA: Calanus finmarchicus comp18158_c1_seq2 transcribed RNA sequence)

HSP 1 Score: 80.4925 bits (197), Expect = 5.911e-18
Identity = 45/97 (46.39%), Postives = 56/97 (57.73%), Query Frame = 0

Query:    9 TLVCMFLSMLNLTQGQL---------RSPSLYQNCGCQCNSYTFSDIKGYTQGNCFSSDFTGGRWCYVDYGN-TCHDAVPSLRY-NGQWSYEACSTP 94
            TLV MF+    L    L         ++ S Y NCGCQC+S TF D     QGNC + D TG +WCYVD  + +C D VPS R+ +  WSYEAC+TP
Sbjct:   28 TLVTMFIFFTILASMALSTTYSKTLNKASSPYTNCGCQCSSLTFRDSANIIQGNCKTVDSTGAQWCYVDSSHSSCQDLVPSQRFPHNPWSYEACATP 318

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BLAST of EMLSAG00000002890 vs. C. finmarchicus
Match: gi|592932378|gb|GAXK01026175.1| (TSA: Calanus finmarchicus comp18158_c1_seq5 transcribed RNA sequence)

HSP 1 Score: 77.7962 bits (190), Expect = 6.538e-18
Identity = 44/96 (45.83%), Postives = 55/96 (57.29%), Query Frame = 0

Query:    9 TLVCMFLSMLNLTQGQL---------RSPSLYQNCGCQCNSYTFSDIKGYTQGNCFSSDFTGGRWCYVDYGN-TCHDAVPSLRY-NGQWSYEACST 93
            TLV MF+    L    L         ++ S Y NCGCQC+S TF D     QGNC + D TG +WCYVD  + +C D VPS R+ +  WSYEAC+T
Sbjct:   28 TLVTMFIFFTILASMALSTTYSKTLNKASSPYTNCGCQCSSLTFRDSANIIQGNCKTVDSTGAQWCYVDSSHSSCQDLVPSQRFPHNPWSYEACAT 315

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BLAST of EMLSAG00000002890 vs. C. finmarchicus
Match: gi|592932367|gb|GAXK01026186.1| (TSA: Calanus finmarchicus comp18158_c2_seq11 transcribed RNA sequence)

HSP 1 Score: 76.2554 bits (186), Expect = 1.444e-16
Identity = 41/99 (41.41%), Postives = 55/99 (55.56%), Query Frame = 0

Query:    1 MIKIQLIKTLVCMFLSMLNLTQGQLRSPSLYQNCGCQCNSYTFSDIKGYTQGNCFSSDFTGGRWCYVD-YGNTCHD-AVPSLRYNGQ-WSYEACSTPRC 96
            ++ I     L+      +  T    ++ S Y NCGCQC++ TF D  G T GNC   D TG +WCYVD    +C D +  S R+ G+ WSYEAC+TP C
Sbjct:  157 LVTISTFLILLAPTAESVKTTDTNTKAASPYTNCGCQCSNLTFKDKYGNTHGNCKRVDHTGAQWCYVDPRQGSCQDLSYTSTRFPGKPWSYEACATPAC 453

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BLAST of EMLSAG00000002890 vs. C. finmarchicus
Match: gi|592932369|gb|GAXK01026184.1| (TSA: Calanus finmarchicus comp18158_c2_seq9 transcribed RNA sequence)

HSP 1 Score: 76.2554 bits (186), Expect = 1.579e-16
Identity = 41/99 (41.41%), Postives = 55/99 (55.56%), Query Frame = 0

Query:    1 MIKIQLIKTLVCMFLSMLNLTQGQLRSPSLYQNCGCQCNSYTFSDIKGYTQGNCFSSDFTGGRWCYVD-YGNTCHD-AVPSLRYNGQ-WSYEACSTPRC 96
            ++ I     L+      +  T    ++ S Y NCGCQC++ TF D  G T GNC   D TG +WCYVD    +C D +  S R+ G+ WSYEAC+TP C
Sbjct:  157 LVTISTFLILLAPTAESVKTTDTNTKAASPYTNCGCQCSNLTFKDKYGNTHGNCKRVDHTGAQWCYVDPRQGSCQDLSYTSTRFPGKPWSYEACATPAC 453

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BLAST of EMLSAG00000002890 vs. L. salmonis peptides
Match: EMLSAP00000002890 (pep:novel supercontig:LSalAtl2s:LSalAtl2s166:445712:450389:1 gene:EMLSAG00000002890 transcript:EMLSAT00000002890 description:"maker-LSalAtl2s166-augustus-gene-4.9")

HSP 1 Score: 300.827 bits (769), Expect = 1.273e-105
Identity = 145/145 (100.00%), Postives = 145/145 (100.00%), Query Frame = 0

Query:    1 MIKIQLIKTLVCMFLSMLNLTQGQLRSPSLYQNCGCQCNSYTFSDIKGYTQGNCFSSDFTGGRWCYVDYGNTCHDAVPSLRYNGQWSYEACSTPRCYYNNNNGFYNYDNYNGFSPQYGVNNFGPPYVFKNSLLRAKRALNKTKDH 145
            MIKIQLIKTLVCMFLSMLNLTQGQLRSPSLYQNCGCQCNSYTFSDIKGYTQGNCFSSDFTGGRWCYVDYGNTCHDAVPSLRYNGQWSYEACSTPRCYYNNNNGFYNYDNYNGFSPQYGVNNFGPPYVFKNSLLRAKRALNKTKDH
Sbjct:    1 MIKIQLIKTLVCMFLSMLNLTQGQLRSPSLYQNCGCQCNSYTFSDIKGYTQGNCFSSDFTGGRWCYVDYGNTCHDAVPSLRYNGQWSYEACSTPRCYYNNNNGFYNYDNYNGFSPQYGVNNFGPPYVFKNSLLRAKRALNKTKDH 145

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BLAST of EMLSAG00000002890 vs. L. salmonis peptides
Match: EMLSAP00000004889 (pep:novel supercontig:LSalAtl2s:LSalAtl2s257:179358:180381:1 gene:EMLSAG00000004889 transcript:EMLSAT00000004889 description:"maker-LSalAtl2s257-augustus-gene-1.12")

HSP 1 Score: 105.145 bits (261), Expect = 1.039e-29
Identity = 49/84 (58.33%), Postives = 62/84 (73.81%), Query Frame = 0

Query:   17 MLNLTQGQ----LRSPSLYQNCGCQCNSYTFSDIKGYTQGNCFSSDFTGGRWCYVDYGNTCHDAVPSLRYNGQWSYEACSTPRC 96
            ML L+  Q    L++PSL QNCGCQC+S TF+D  G  QGNC S+D+TG RWCY+ + +TC+DA  S R+  QWSYEAC+TPRC
Sbjct:    1 MLTLSSAQNGIILKAPSLVQNCGCQCSSLTFADSYGRIQGNCRSADYTGARWCYIPFSHTCNDAQYSSRFRNQWSYEACATPRC 84

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BLAST of EMLSAG00000002890 vs. L. salmonis peptides
Match: EMLSAP00000007122 (pep:novel supercontig:LSalAtl2s:LSalAtl2s401:64891:74089:-1 gene:EMLSAG00000007122 transcript:EMLSAT00000007122 description:"maker-LSalAtl2s401-augustus-gene-0.13")

HSP 1 Score: 98.2117 bits (243), Expect = 7.452e-26
Identity = 50/98 (51.02%), Postives = 65/98 (66.33%), Query Frame = 0

Query:   10 LVCMFL---SMLNLTQGQ---LRSPSLYQNCGCQCNSYTFSDIKGYTQGNCFSSDFTGGRWCYVDYGNTCHDAVPSLRYNG-----QWSYEACSTPRC 96
            ++C FL    ++ LT  Q   L++PSL  NCGCQC++Y F D++G TQGNC S+D TG +WCYVD G+TC D   S R +      Q SYEAC+TPRC
Sbjct:   99 MICKFLIISVVVALTSAQDITLKAPSLAVNCGCQCSNYIFRDLRGITQGNCNSADRTGAKWCYVDRGHTCQDTRGSGRKDQFGRRRQISYEACATPRC 196

HSP 2 Score: 85.5001 bits (210), Expect = 3.409e-21
Identity = 46/95 (48.42%), Postives = 60/95 (63.16%), Query Frame = 0

Query:    1 MIKIQLIKTLVCMFLSMLNLTQGQLRSPSLYQNCGCQCNSYTFSDIKGYTQGNCFSSDFTGGRWCYVDYGNTCHDAVPSLRYNG-----QWSYEA 90
            MI   LI ++V    S  ++T   L++PSL  NCGCQC++Y F D++G TQGNC S+D TG +WCYVD G+TC D   S R +      Q SYEA
Sbjct:    1 MICKILIISVVVALTSAQDIT---LKAPSLAVNCGCQCSNYIFRDLRGITQGNCNSADQTGAKWCYVDRGHTCQDTRGSGRRDQFGRRRQISYEA 92

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BLAST of EMLSAG00000002890 vs. L. salmonis peptides
Match: EMLSAP00000007123 (pep:novel supercontig:LSalAtl2s:LSalAtl2s401:84241:84844:-1 gene:EMLSAG00000007123 transcript:EMLSAT00000007123 description:"maker-LSalAtl2s401-augustus-gene-0.14")

HSP 1 Score: 97.4413 bits (241), Expect = 7.636e-26
Identity = 50/98 (51.02%), Postives = 64/98 (65.31%), Query Frame = 0

Query:   10 LVCMFL---SMLNLTQGQ---LRSPSLYQNCGCQCNSYTFSDIKGYTQGNCFSSDFTGGRWCYVDYGNTCHDAVPSLR-----YNGQWSYEACSTPRC 96
            ++C FL    ++ LT  Q   L++PSL  NCGCQC++Y F D++G TQGNC S+D TG +WCYVD G+TC D   S R        Q SYEAC+TPRC
Sbjct:    1 MICKFLIISVVVALTSAQDITLKAPSLAVNCGCQCSNYIFRDLRGITQGNCNSADRTGAKWCYVDRGHTCQDTRGSGRNDQFGRRRQISYEACATPRC 98

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BLAST of EMLSAG00000002890 vs. L. salmonis peptides
Match: EMLSAP00000007117 (pep:novel supercontig:LSalAtl2s:LSalAtl2s401:30551:49956:-1 gene:EMLSAG00000007117 transcript:EMLSAT00000007117 description:"maker-LSalAtl2s401-augustus-gene-0.12")

HSP 1 Score: 97.4413 bits (241), Expect = 2.970e-25
Identity = 50/101 (49.50%), Postives = 66/101 (65.35%), Query Frame = 0

Query:    1 MIKIQLIKTLVCMFLSMLNLTQGQLRSPSLYQNCGCQCNSYTFSDIKGYTQGNCFSSDFTGGRWCYVDYGNTCHDAVPSLRYNG-----QWSYEACSTPRC 96
            MI   LI ++V    S  ++T   L++PSL  NCGCQC++Y F D++G TQGNC S+D TG +WCYVD G+TC D + S R +      Q SYEAC+TP C
Sbjct:   56 MICKILIISVVVALTSAQDIT---LKAPSLAVNCGCQCSNYIFRDLRGITQGNCNSADQTGAKWCYVDRGHTCQDTIGSARNDQFGRRRQISYEACATPNC 153

HSP 2 Score: 84.7297 bits (208), Expect = 1.323e-20
Identity = 42/77 (54.55%), Postives = 51/77 (66.23%), Query Frame = 0

Query:   25 LRSPSLYQNCGCQCNSYTFSDIKGYTQGNCFSSDFTGGRWCYVDYGNTCHDAVPSLR-----YNGQWSYEACSTPRC 96
            L++PSL  NCGCQC+ Y F D++G TQGNC S+D TG +WCYV+ G TC     S R        Q SYEAC+TPRC
Sbjct:  157 LKAPSLAVNCGCQCSIYIFQDVRGITQGNCNSADQTGAKWCYVNRGYTCQYTRGSGRNYQFGRRRQISYEACATPRC 233

HSP 3 Score: 54.6842 bits (130), Expect = 5.533e-10
Identity = 27/59 (45.76%), Postives = 39/59 (66.10%), Query Frame = 0

Query:    1 MIKIQLIKTLVCMFLSMLNLTQGQLRSPSLYQNCGCQCNSYTFSDIKGYTQGNCFSSDF 59
            MI   LI ++V +  S  ++T   L++PSL  NCGCQC++Y F D++G TQGNC S+  
Sbjct:    1 MICKILIISVVVVLASAQDIT---LKAPSLAVNCGCQCSNYIFQDVRGITQGNCNSAKM 56

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BLAST of EMLSAG00000002890 vs. L. salmonis peptides
Match: EMLSAP00000001015 (pep:novel supercontig:LSalAtl2s:LSalAtl2s116:786764:792986:-1 gene:EMLSAG00000001015 transcript:EMLSAT00000001015 description:"maker-LSalAtl2s116-augustus-gene-8.13")

HSP 1 Score: 95.1301 bits (235), Expect = 1.368e-24
Identity = 50/101 (49.50%), Postives = 64/101 (63.37%), Query Frame = 0

Query:    1 MIKIQLIKTLVCMFLSMLNLTQGQLRSPSLYQNCGCQCNSYTFSDIKGYTQGNCFSSDFTGGRWCYVDYGNTCHDAVPSLRYNG-----QWSYEACSTPRC 96
            MI   LI ++   F S  ++T   L++PSL  NCGCQC++Y F D  G TQGNC S+D TG +WCYV+ G+TC D   S R +      Q SYEAC+TPRC
Sbjct:    1 MISKILILSIFVAFGSAQDIT---LKAPSLAVNCGCQCSNYIFRDGNGITQGNCNSADRTGAKWCYVERGHTCQDTRRSXRRDNFGRLRQISYEACATPRC 98

HSP 2 Score: 49.6766 bits (117), Expect = 2.976e-8
Identity = 27/56 (48.21%), Postives = 36/56 (64.29%), Query Frame = 0

Query:    1 MIKIQLIKTLVCMFLSMLNLTQGQLRSPSLYQNCGCQCNSYTFSDIKGYTQGNCFS 56
            MI   LI ++  +F S  ++T   L++PSL  NCGCQC++Y F D  G TQGNC S
Sbjct:  172 MISKILILSIFVVFGSAQDIT---LKAPSLAVNCGCQCSNYIFRDGNGITQGNCNS 224

[Close]

BLAST of EMLSAG00000002890 vs. L. salmonis peptides
Match: EMLSAP00000012322 (pep:novel supercontig:LSalAtl2s:LSalAtl2s8:1311290:1311781:1 gene:EMLSAG00000012322 transcript:EMLSAT00000012322 description:"augustus_masked-LSalAtl2s8-processed-gene-15.4")

HSP 1 Score: 84.3445 bits (207), Expect = 5.385e-21
Identity = 49/106 (46.23%), Postives = 63/106 (59.43%), Query Frame = 0

Query:    1 MIKIQLIKTLVCMFLSMLNLTQGQLRSPSLYQNCGCQCNSYTFSDIKGYTQGNCFSSDFTGGRWCYVDYGNTCHDAVPSLRYNGQWSYEACSTPRCYYNNNNGFYN 106
            + KI L+  LV  +++   +T   L++PSL  NCGCQC+S+ F D  G TQGNC S+D +G RWC+V  GNTC D   S       S EAC+TPRC      GF N
Sbjct:    2 IAKIILLSALV-AYVTSQGIT---LKAPSLAINCGCQCDSFIFRDRFGQTQGNCRSTDRSGARWCFVRPGNTCTDT--SFFRGRTISNEACATPRCGNIFPKGFEN 101

[Close]

BLAST of EMLSAG00000002890 vs. L. salmonis peptides
Match: EMLSAP00000001011 (pep:novel supercontig:LSalAtl2s:LSalAtl2s116:644091:644652:-1 gene:EMLSAG00000001011 transcript:EMLSAT00000001011 description:"maker-LSalAtl2s116-augustus-gene-6.17")

HSP 1 Score: 84.3445 bits (207), Expect = 5.670e-21
Identity = 47/101 (46.53%), Postives = 61/101 (60.40%), Query Frame = 0

Query:    1 MIKIQLIKTLVCMFLSMLNLTQGQLRSPSLYQNCGCQCNSYTFSDIKGYTQGNCFSSDFTGGRWCYVDYGNTCHDAVPSLRYNG-----QWSYEACSTPRC 96
            MI   LI ++   F S  ++T   L++PSL  NCGCQC++Y F D  G TQGNC S+D TG ++CYV+ G T  D   S R +      Q S EAC+TPRC
Sbjct:    1 MISKILILSIFVAFGSAQDIT---LKAPSLAVNCGCQCSNYIFRDGNGITQGNCNSADRTGAKFCYVEPGXTXQDTRRSGRRDXFGRFRQISNEACATPRC 98

[Close]

BLAST of EMLSAG00000002890 vs. L. salmonis peptides
Match: EMLSAP00000006139 (pep:novel supercontig:LSalAtl2s:LSalAtl2s335:347119:354560:1 gene:EMLSAG00000006139 transcript:EMLSAT00000006139 description:"snap_masked-LSalAtl2s335-processed-gene-4.8")

HSP 1 Score: 80.4925 bits (197), Expect = 5.248e-19
Identity = 45/100 (45.00%), Postives = 59/100 (59.00%), Query Frame = 0

Query:    7 IKTLVCMFLSMLNLTQGQ-----LRSPSLYQNCGCQCNSYTFSDIKGYTQGNCFSSDFTGGRWCYVDYGNTCHDAVPSLRYN--GQ---WSYEACSTPRC 96
            + T   +F +++  T  Q     L++ SL  NCGCQCN+Y F D  G TQGNC + D +G +WCYV  GNTC+D   S R +  GQ    S EAC+TP C
Sbjct:   37 VATFKAVFFTIIACTIAQKNDIKLKAASLQTNCGCQCNNYIFLDKYGKTQGNCNTVDKSGAKWCYVSRGNTCNDVTYSSRKDERGQPRRISNEACATPVC 136

[Close]

BLAST of EMLSAG00000002890 vs. L. salmonis peptides
Match: EMLSAP00000006141 (pep:novel supercontig:LSalAtl2s:LSalAtl2s335:388935:390297:1 gene:EMLSAG00000006141 transcript:EMLSAT00000006141 description:"maker-LSalAtl2s335-snap-gene-4.14")

HSP 1 Score: 76.6406 bits (187), Expect = 5.268e-18
Identity = 40/77 (51.95%), Postives = 50/77 (64.94%), Query Frame = 0

Query:   25 LRSPSLYQNCGCQCNSYTFSDIKGYTQGNCFSSDFTGGRWCYVDYGNTCHDAVPSLRYN--GQ---WSYEACSTPRC 96
            L++ S   NCGCQCN+Y F D  G TQGNC ++D +G +WCYV  GNTC+D   S R +  GQ    S EAC+TP C
Sbjct:   24 LKAASSRTNCGCQCNNYIFKDKYGRTQGNCNTADKSGAKWCYVSRGNTCNDVTYSSRKDERGQPRRISNEACATPVC 100

[Close]

BLAST of EMLSAG00000002890 vs. nr
Match: gi|155966135|gb|ABU41022.1| (hypothetical protein [Lepeophtheirus salmonis])

HSP 1 Score: 90.5077 bits (223), Expect = 2.591e-20
Identity = 49/101 (48.51%), Postives = 63/101 (62.38%), Query Frame = 0

Query:    1 MIKIQLIKTLVCMFLSMLNLTQGQLRSPSLYQNCGCQCNSYTFSDIKGYTQGNCFSSDFTGGRWCYVDYGNTCHDAVPSLRYNG-----QWSYEACSTPRC 96
            MI   LI ++   F S  ++T   L++PSL  NCGCQC++Y F D  G TQGNC S+D TG ++CYV+ GNTC D   S R +      Q S EAC+TPRC
Sbjct:    1 MISKILIVSIFVAFGSAQDIT---LKAPSLAVNCGCQCSNYIFRDGNGITQGNCNSADRTGAKFCYVEPGNTCQDTRRSGRRDNFGRFRQISNEACATPRC 98

[Close]

BLAST of EMLSAG00000002890 vs. Tigriopus kingsejongenis genes
Match: maker-scaffold381_size190066-snap-gene-0.31 (protein:Tk01605 transcript:maker-scaffold381_size190066-snap-gene-0.31-mRNA-1 annotation:"hypothetical protein")

HSP 1 Score: 68.5514 bits (166), Expect = 2.775e-15
Identity = 41/110 (37.27%), Postives = 57/110 (51.82%), Query Frame = 0

Query:    1 MIKIQLIKTLVCMFLSMLNLTQGQ--------LRSPSLYQNCGCQCNSYTFSDIKGYTQGNCFSSDFTGGRWCYVDYG--NTCHDAVPSL-RYNG-----QWSYEACSTP 94
            MI++ ++  +  + L    +T  Q        L++PS   NCGCQC+ YT+ D  G  QGNC S+D T   WCY+      +C D   S  R +      +WSYEACSTP
Sbjct:    7 MIQLSILGLMGLLALVSSQITDTQVAESGDIVLKAPSNLINCGCQCDPYTWRDTLGRVQGNCRSADATKALWCYIPASAFTSCADIRQSRNRLDNFGRPRRWSYEACSTP 116

[Close]

BLAST of EMLSAG00000002890 vs. Tigriopus kingsejongenis genes
Match: maker-scaffold381_size190066-snap-gene-0.30 (protein:Tk01607 transcript:maker-scaffold381_size190066-snap-gene-0.30-mRNA-1 annotation:"hypothetical protein AN3340.2")

HSP 1 Score: 62.7734 bits (151), Expect = 2.956e-13
Identity = 41/121 (33.88%), Postives = 57/121 (47.11%), Query Frame = 0

Query:   10 LVCMFLSMLNLTQGQ---------------LRSPSLYQNCGCQCNSYTFSDIKGYTQGNCFSSDFTGGRWCYVD-YGNTCHDAVPSLRYNG------QWSYEACSTPR--CYYNNNNGFYN 106
            ++   L++  LTQ Q                ++PS   +C CQC++YT+        GNCFS+D T  +WCYVD Y   C D   S           +WSY+ACSTP    +   NNG +N
Sbjct:    6 ILSTVLALTALTQAQDEAEDGVDTKSVEILQKAPSNQVSCNCQCDNYTYKGGDNQIHGNCFSADQTKAKWCYVDQYSGECDDIQYSKNRRDSHGNLRKWSYQACSTPERASHQCRNNGSFN 126

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BLAST of EMLSAG00000002890 vs. Tigriopus kingsejongenis genes
Match: maker-scaffold381_size190066-snap-gene-0.32 (protein:Tk01608 transcript:maker-scaffold381_size190066-snap-gene-0.32-mRNA-1 annotation:"---NA---")

HSP 1 Score: 62.7734 bits (151), Expect = 4.364e-13
Identity = 33/80 (41.25%), Postives = 48/80 (60.00%), Query Frame = 0

Query:   26 RSPSLYQNCGCQCNSYTFSDIKGYTQGNCFSSDFTGGRWCYVD-YGNTC---------HDAVPSLRYNGQWSYEACSTPR 95
            ++PS   +C CQC++YT+        GNCF++D T G+WCY+D Y N C          D+  +LR   +WSY+ACSTP+
Sbjct:   39 KAPSNRVSCNCQCDNYTYKGDDNQIHGNCFTADHTRGKWCYLDQYNNDCDDIQYSKNRRDSFGNLR---EWSYQACSTPQ 115

The following BLAST results are available for this feature:

BLAST of EMLSAG00000002890 vs. GO
BLAST of EMLSAG00000002890 vs. C. finmarchicus
BLAST of EMLSAG00000002890 vs. L. salmonis peptides
BLAST of EMLSAG00000002890 vs. SwissProt
BLAST of EMLSAG00000002890 vs. Select Arthropod Genomes
BLAST of EMLSAG00000002890 vs. nr
BLAST of EMLSAG00000002890 vs. Tigriopus kingsejongenis genes

BLAST of EMLSAG00000002890 vs. GO
Analysis Date: 2014-04-02 (Blast vs. GO)
Total hits: 0


Match Name	E-value	Identity	Description

BLAST of EMLSAG00000002890 vs. C. finmarchicus
Analysis Date: 2014-05-09 (TblastN vs C. finmarchicus TSA)
Total hits: 25


Match Name	E-value	Identity	Description
gi\|592932380\|gb\|GAXK01026173.1\|	8.764e-20	42.11	TSA: Calanus finmarchicus comp18158_c1_seq3 transc...	[more]
gi\|592906544\|gb\|GAXK01051831.1\|	1.086e-19	50.54	TSA: Calanus finmarchicus comp28981_c1_seq1 transc...	[more]
gi\|592932379\|gb\|GAXK01026174.1\|	1.641e-19	45.83	TSA: Calanus finmarchicus comp18158_c1_seq4 transc...	[more]
gi\|592932382\|gb\|GAXK01026171.1\|	3.713e-19	42.11	TSA: Calanus finmarchicus comp18158_c1_seq1 transc...	[more]
gi\|592848676\|gb\|GAXK01108868.1\|	1.354e-18	51.65	TSA: Calanus finmarchicus comp296545_c0_seq1 trans...	[more]
gi\|592848675\|gb\|GAXK01108869.1\|	1.425e-18	51.65	TSA: Calanus finmarchicus comp296545_c0_seq2 trans...	[more]
gi\|592932381\|gb\|GAXK01026172.1\|	5.911e-18	46.39	TSA: Calanus finmarchicus comp18158_c1_seq2 transc...	[more]
gi\|592932378\|gb\|GAXK01026175.1\|	6.538e-18	45.83	TSA: Calanus finmarchicus comp18158_c1_seq5 transc...	[more]
gi\|592932367\|gb\|GAXK01026186.1\|	1.444e-16	41.41	TSA: Calanus finmarchicus comp18158_c2_seq11 trans...	[more]
gi\|592932369\|gb\|GAXK01026184.1\|	1.579e-16	41.41	TSA: Calanus finmarchicus comp18158_c2_seq9 transc...	[more]

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BLAST of EMLSAG00000002890 vs. L. salmonis peptides
Analysis Date: 2014-05-10 (Blastp vs. self)
Total hits: 20


Match Name	E-value	Identity	Description
EMLSAP00000002890	1.273e-105	100.00	pep:novel supercontig:LSalAtl2s:LSalAtl2s166:44571...	[more]
EMLSAP00000004889	1.039e-29	58.33	pep:novel supercontig:LSalAtl2s:LSalAtl2s257:17935...	[more]
EMLSAP00000007122	7.452e-26	51.02	pep:novel supercontig:LSalAtl2s:LSalAtl2s401:64891...	[more]
EMLSAP00000007123	7.636e-26	51.02	pep:novel supercontig:LSalAtl2s:LSalAtl2s401:84241...	[more]
EMLSAP00000007117	2.970e-25	49.50	pep:novel supercontig:LSalAtl2s:LSalAtl2s401:30551...	[more]
EMLSAP00000001015	1.368e-24	49.50	pep:novel supercontig:LSalAtl2s:LSalAtl2s116:78676...	[more]
EMLSAP00000012322	5.385e-21	46.23	pep:novel supercontig:LSalAtl2s:LSalAtl2s8:1311290...	[more]
EMLSAP00000001011	5.670e-21	46.53	pep:novel supercontig:LSalAtl2s:LSalAtl2s116:64409...	[more]
EMLSAP00000006139	5.248e-19	45.00	pep:novel supercontig:LSalAtl2s:LSalAtl2s335:34711...	[more]
EMLSAP00000006141	5.268e-18	51.95	pep:novel supercontig:LSalAtl2s:LSalAtl2s335:38893...	[more]

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BLAST of EMLSAG00000002890 vs. SwissProt
Analysis Date: 2017-02-10 (Blastp vs. SwissProt)
Total hits: 0


Match Name	E-value	Identity	Description

BLAST of EMLSAG00000002890 vs. Select Arthropod Genomes
Analysis Date: 2017-02-20 (Blastp vs. Selected Arthropods)
Total hits: 0


Match Name	E-value	Identity	Description

BLAST of EMLSAG00000002890 vs. nr
Analysis Date: 2017-02-20 (Blastp vs. NR (2/2017))
Total hits: 1


Match Name	E-value	Identity	Description
gi\|155966135\|gb\|ABU41022.1\|	2.591e-20	48.51	hypothetical protein [Lepeophtheirus salmonis]	[more]

BLAST of EMLSAG00000002890 vs. Tigriopus kingsejongenis genes
Analysis Date: 2018-04-18 (Blastp vs. Tigriopus kingsejongensis proteins)
Total hits: 3


Match Name	E-value	Identity	Description
maker-scaffold381_size190066-snap-gene-0.31	2.775e-15	37.27	protein:Tk01605 transcript:maker-scaffold381_size1...	[more]
maker-scaffold381_size190066-snap-gene-0.30	2.956e-13	33.88	protein:Tk01607 transcript:maker-scaffold381_size1...	[more]
maker-scaffold381_size190066-snap-gene-0.32	4.364e-13	41.25	protein:Tk01608 transcript:maker-scaffold381_size1...	[more]

Alignments

The following features are aligned


Aligned Feature	Feature Type	Alignment Location
LSalAtl2s166	supercontig	LSalAtl2s166:445712..450389 +

Analyses

This gene is derived from or has results from the following analyses


Analysis Name	Date Performed
ensembl	2013-09-26 .965016
Blast vs. GO	2014-04-02
TblastN vs C. finmarchicus TSA	2014-05-09
Blastp vs. self	2014-05-10
Blastp vs. SwissProt	2017-02-10
Blastp vs. Selected Arthropods	2017-02-20
Blastp vs. NR (2/2017)	2017-02-20
Blastp vs. Tigriopus kingsejongensis proteins	2018-04-18

Properties


Property Name	Value
Logic name	ensemblgenomes
Description	maker-LSalAtl2s166-augustus-gene-4.9
Biotype	protein_coding
Evidence	IEA
Note	hypothetical protein [Lepeophtheirus salmonis]

Cross References

External references for this gene


Database	Accession
Ensembl Metazoa (gene)	EMLSAG00000002890 (primary cross-reference)

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Species	Type
EMLSAT00000002890	EMLSAT00000002890-698737	Lepeophtheirus salmonis	mRNA

Sequences

The following sequences are available for this feature:

gene from alignment at LSalAtl2s166:445712..450389+

gene from alignment at LSalAtl2s166:445712..450389+

Legend: mRNA

Hold the cursor over a type above to highlight its positions in the sequence below.

>EMLSAG00000002890-685656 ID=EMLSAG00000002890-685656|Name=EMLSAG00000002890|organism=Lepeophtheirus salmonis|type=gene|length=4678bp|location=Sequence derived from alignment at LSalAtl2s166:445712..450389+ (Lepeophtheirus salmonis)
GGAAACAACATTTTTTTAATAGATACATATATAAAATAGGAGAAGAAACA
AGTTTCAAACATTTATCGTCATTGGGAAGTGAAATATAAACACCTTAAGA
AATGATCAAAATTCAACTCATTAAAACACTAGTTTGTATGTTTTTGAGCA
TGCTCAACCTTACACAAGGGCAATTAAGATCACCATCCCTCTATCAAAAC
TGTGGTTGTCAATGTAATAGCTATACTTTTAGTGATATCAAAGGATACAC
TCAAGGAAACTGTTTTTCGTAAGTTATCTATTGATCTAGTTTCTTGATTG
TTTTATGTGTATAAAATAAATTACTAATTAATCTTGGCAAATATACTTTT
GAATATATTCAGAATATATTTTTCTGTAGAGTGTTTTCATTGTCATCATA
TATTACAGAATAAAAATCCTAAGCGACGCCATGTTGGAATATGTACTTTT
TGATAATTTTATTATAAACGTTTTATAAAGCCTCTGTTATTTCCCTAGAT
AGGGGTGCTTATTCACTCAAGAGACTAAAATATCATTGTGTAATAAATCA
AGAACTTGAAAAAAAAGCAAAATATGATATACACATAGTCTTTCTGTATC
CATTTTTCTTAATTTGATATTTTGTTAGTTTCTGGGTTAATAAGAGATTT
TAGAATTAGTTATAGAAGTTTCAAAGAATTATTTTCATGCATTCTTATCA
TTTATGAAAATAATGTTATTTGCCAGTTTTAAAATGACCCCAAAAATTTA
TGTGTTCACCCTGATAGTTTAACCAAATGCTAGGGAGAAAAACAGCTTAG
CTGTCGAGATCTTTTATTAAACTTGATACGAGCAGCTATGCAATTAAGAA
ATAAAAAAAAAAATATTAATTTTCTCCAACTATTATTTCAGATTATAAAC
TCACAGATATAAAATATAATGCTATAAAAGTATTAAAAATTTTCACTGAT
GCTTATGGTATTATATGTTACAAATTTAACTGTTAAATAGAGTTAAATAT
ATATTGCTGAAATATCAATTTTAATGTTGGGGTGGCTTAACACATCAGGG
GAGTACTTACAATAGAATTTAAAGGGAAGTAACGGGAAATTAAGCAAAAA
TAGTCTAAGACTCTTAAAAATGAACAAAAAACTCAACTAGATTTATAATA
AAAAAGAGTTTTGGATGGAAATGCTTTTAATTCTTAAATTGATCAGTTGA
TGATTGGTCGGGAGATTAAACCAGGGGTGTTTGCAGGGTGTCGATTAGAG
GGGCAGTAGCCCCCTCCTCCAAATTAAGGATTTTTTTCTTTTTACTAAAA
AAAATTATAATTGAATTTTTTTCCTAAAAAATTAATATTTGAAATTGACT
GCAATTTTTCAATTTTTTTTGCAAATAAATTATTTTCTGTCAATAACTAT
AGATTTTTAAACTTTTTTCTCGGAGAAATTTAATAATTGAATTTTTTGGT
AAAAATTTGTGGATTTTTTAATTCTTTTTTAAAAAAATTAATATATAAAA
TTTAATTTAAAAATTTTTTTTCATACCAAAAAATTTTCATATTTGAATTT
TTGTCAAAAAACTTTCAAAAGCCAAAGATCATAATCTGTTTTGTGTATCC
AACAAATATATAAATATAATAACAAGGGGTAAAATCAATAAAGATCTTGT
TTCAAATATAATTCACGTAAATAAATACAGATAACCAGTATATAAATATT
TTGAAGGACAATTTTAACTATTAAGAATAACAAAATATTGTGTCAGTCTG
TATTTGAATACCTTATTTTTTGAGTGTGCACTAAATATCTTAAAACTATG
TAGCTACAACATCTTCAAAATAATAATGTAGCAACAACCGTATGTGACGC
TCAGCGCATCATATCAAACATAAATAAATAAATTAAAAATTAAAAAAGAT
AATATAAAAAAATCATTAGTTATATATTGGATCCTAAGATGATACCTCAC
CACCAGACTATCGTACTTAAAATATTATTTAAAAATGTGCATTTTAGTTC
TTGTGATTGCAATTTTGTAGAATTTTAAATTAAAACAATTTTTTAAATAA
ATTTCATAGCTATAAAAAGAGTGATTTTTTTGCTTAAATTGACCATACAA
TAATTGTGTTTACGAAGGGTGTTGAAAAACTTTGTTTTATAGTTTAACAA
ATAATTCTGAGAAAAGATGTTTACACTATTCATTGTTTTATATTTTTACC
AATGATATTGATCTTTTTTTAAAATAATATATCAAAGAAACAACACCAAT
TTGTTAATAAATATGTTTCAATAAATTTGTCCACTTTTAAAACAAAAGAG
TTTTCTTTTAAAAACAGTGGACTAATGTTTGTTAAGATATCAAAATTAAT
ATCGTTATTTTGATAGTTTTTACGCTAAAAATAGCAAAGAAAAAATCATT
ATAGACAGTTTATCTCCAATTAAAGTGGCGTCTGCAGGAATTTTGCTTGG
GGCTAGTTGATTAACTTGATGGCGTCTTTTTTTTTATTGTAATTTTTCAT
TATTTTTGTTTCCTGAAATATGAGACAATTTTATTAAAGTTAACTCCGTG
TTGGACTAATTTTGTTATAATTTAAGGAGTTGGCAGGAATCGGCTTRAAT
ATCAATTMTAGACAGTCTTMATGGAGATCCCAACTATCTTTAAAGTCTTC
TCAGTCCCGATACTGGCGCAGAGGAGGTTGCACACGTGTTGTCTTTATTG
TCGTTGCTCCGACGTTTTTACAACTAGAAACACGGGATAGTATAAACTTG
TTTACCTTCTTCAAAATGCTCCACTTACTAATGGGGCACTTTTCTGTCTA
GTTGTTCCCACAATAGCTCTATTCGGCTCAAATAATTTTGTTTCAGCTGT
CGTTTGGTTAGATTATGAAATATTGCAGTTAAAAATTACTGATATGAAAT
CGAAATTAAATGTTACTGCAAGTTTTGGATCCTAACTTTGTATCTGTCAA
ACATTTTCTAAACTGAATAAAATAATAATGCTATTTCCCAATTTTTATAA
GAGTTTTAATACCAACTCTGATAAAAGAAGGTAACAATTATTTACTATAC
ACTCATCAATAAAAATCCTAATTTGTAGATTTAGTTTTATATTCTGACAC
AGGTTAGTCAGTTCTTAAAAATTGTTTGACTGTCGTAGATATTCAAATTG
CTAAGAAAAAAAAAGTTTTCTTTTACTCTATTTCCCAAGATTATTTTATT
TTTATTTTATAATGAAGATAATTTTAGCTCGCCTTTTTTCAATTGTCCCT
GTCATACCCAAAGCTATAACTCAAGTGGCGAGTTGAAGCTCCCTTGATCA
ATATTGAAATACATATAATTGGCTACGGAAGGACTTTTTTTGTTGTCAAA
AAGCGACATTATGCGTGGGAAAAAAGANGCTACACAAGCAACAATCATGT
TTCGCTACATGTTGATCGCATTAGTCGTACTGATATTGACAAAATCAAGT
TTATTTTCTGAAAGGTGATGAACGTGAAGGATATAATTTGAAAGAAAACA
TTTTCATTCAAGCTTATATGAGTTTGTTCAAAATTATAAATAACTAGACA
TTGTGAAAACAAAAGTTTCCTATCTCAAAAGATTTATATGGGTACAAATA
TGAAAAAAAAGATATCAAAATATAAAGTATTTGAACACAAGAATATTGGA
TGATAATTCCATGACACTGTCCAGGGCTGGTTTTACAGTTAGCGGGTCTT
GGGGAACAAGATGAAAATACAAGTCTTTTTTTCTTTTCCCCCTTATTCTT
CATATGTAATTGCACTAATTATATATAATTAATTATATTATAGTACTACA
ATTAATCAATCTCAGTCAGGAAATATATTTTAAGACAATATTCATATTAC
AAGTAAATTTCCTTCTCTTTAGCGATCGAGAATCGAACCTACGCACATTC
CTCCAAAGAAAATATCGTATCCGAGTGGGTTGTCCAATATTCTATGTAGT
TTTATAAGTTTAGTTTAATATATAAAATAAATTTCGCGTTTTTTTAGACA
AACTTTTCTTATTTTATTTCATATGACCTTTTTTCAGACAATATCTATTA
ATTTATGTTTGCAAAGTCTCTTTTCTTTTAAATTATCAAGTACAACCTAC
ATCAGTTGCCCTAATGTTGTCCCCGAAAACTGGCTTAGACTGCAGTTTGT
ATGGGATTCAATCGTCCCAGTCCCTCCTATAGTTAAAATTTATTTGAGCC
TTGATCTACTTTTTTTCGAGTTTTTGACATAAAATTTTCTTAAATTCTAG
ATCCGATTTTACTGGAGGTAGATGGTGCTATGTAGACTATGGTAATACGT
GCCATGATGCGGTTCCTTCTCTTCGTTACAATGGTCAATGGTCCTATGAA
GCCTGCTCTACTCCGAGGTGTTACTATAACAATAATAACGGCTTTTATAA
TTATGATAACTACAACGGCTTTTCTCCTCAATATGGTGTCAACAACTTTG
GGCCCCCATATGTATTTAAGAACTCACTCCTACGTGCTAAACGTGCTTTG
AATAAAACAAAAGACCACTAAATATGTTCATTTTATCGTTCACTCAAAAT
ACATATGTACACACGTTTAACACTTCTAGCGGCATTTAAATTATGTATAT
CAAAATATATATAATATGCACATTATTTTTTTTCTCTTGCTAAATGCACT
TAAATAAAAGTACTTAGTATAACGAAAC

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