EMLSAG00000007327, EMLSAG00000007327-690093 (gene) Lepeophtheirus salmonis
Overview
Associated RNAi Experiments
Homology
BLAST of EMLSAG00000007327 vs. C. finmarchicus
Match: gi|592892529|gb|GAXK01065846.1| (TSA: Calanus finmarchicus comp4881_c0_seq1 transcribed RNA sequence) HSP 1 Score: 51.6026 bits (122), Expect = 7.606e-8 Identity = 26/69 (37.68%), Postives = 43/69 (62.32%), Query Frame = 0 Query: 40 PYPVRIVSGEQLSTKLVLNVLKEIDGDLEVELKMAKKGALFNIPIPCIEISEGFFLGSCKYKVAELLEK 108 P+P+ + +GE ++ + L + + + +V LK+ K+G L +IP+PC+EI EG LGSC Y LL + Sbjct: 191 PFPIVVATGESITLSVQLTLNEPVPVGAQVSLKIKKEG-LIDIPLPCLEI-EGLHLGSCDYDADTLLAE 391
BLAST of EMLSAG00000007327 vs. C. finmarchicus
Match: gi|592850395|gb|GAXK01107149.1| (TSA: Calanus finmarchicus comp36345_c0_seq1 transcribed RNA sequence) HSP 1 Score: 49.6766 bits (117), Expect = 2.336e-7 Identity = 24/68 (35.29%), Postives = 43/68 (63.24%), Query Frame = 0 Query: 39 TPYPVRIVSGEQLSTKLVLNVLKEIDGDLEVELKMAKKGALFNIPIPCIEISEGFFLGSCKYKVAELL 106 TP+P+ + +G ++ + +L+E+ V++K+ K+G L NIP PC+E+ EG +GSC Y ++L Sbjct: 170 TPFPIEMATGNVITLAAQITLLEELPVGTTVDIKIVKEG-LINIPFPCVEV-EGQMVGSCSYNGDDIL 367
BLAST of EMLSAG00000007327 vs. C. finmarchicus
Match: gi|592837693|gb|GAXK01119851.1| (TSA: Calanus finmarchicus comp652609_c0_seq2 transcribed RNA sequence) HSP 1 Score: 49.2914 bits (116), Expect = 7.917e-7 Identity = 25/73 (34.25%), Postives = 44/73 (60.27%), Query Frame = 0 Query: 37 DFTPYPVRIVSGEQLSTKLVLNVLKEIDGDLEVELKMAKKGALFNIPIPCIEISEGFFLGSCKYKVAELLEKY 109 DF PYP++I + + + ++++LK I + +E+++ K G + +IP PC E EG+ GSC Y E L+ + Sbjct: 477 DFEPYPIQIKTEGVEAVRTMIHLLKSIPEKISIEVEITKLG-IIDIPTPCFEW-EGYHFGSCTYDGDEFLKMF 689 HSP 2 Score: 29.6462 bits (65), Expect = 3.275e+0 Identity = 12/34 (35.29%), Postives = 19/34 (55.88%), Query Frame = 0 Query: 76 KGALFNIPIPCIEISEGFFLGSCKYKVAELLEKY 109 + L ++ IPC+E + +GSC Y E L K+ Sbjct: 1050 REGLIDMTIPCLEWEDWGLVGSCTYDAEEFLSKF 1151
BLAST of EMLSAG00000007327 vs. C. finmarchicus
Match: gi|592837694|gb|GAXK01119850.1| (TSA: Calanus finmarchicus comp652609_c0_seq1 transcribed RNA sequence) HSP 1 Score: 49.2914 bits (116), Expect = 8.576e-7 Identity = 25/73 (34.25%), Postives = 44/73 (60.27%), Query Frame = 0 Query: 37 DFTPYPVRIVSGEQLSTKLVLNVLKEIDGDLEVELKMAKKGALFNIPIPCIEISEGFFLGSCKYKVAELLEKY 109 DF PYP++I + + + ++++LK I + +E+++ K G + +IP PC E EG+ GSC Y E L+ + Sbjct: 477 DFEPYPIQIKTEGVEAVRTMIHLLKSIPEKISIEVEITKLG-IIDIPTPCFEW-EGYHFGSCTYDGDEFLKMF 689 HSP 2 Score: 36.1946 bits (82), Expect = 1.914e-2 Identity = 20/73 (27.40%), Postives = 36/73 (49.32%), Query Frame = 0 Query: 37 DFTPYPVRIVSGEQLSTKLVLNVLKEIDGDLEVELKMAKKGALFNIPIPCIEISEGFFLGSCKYKVAELLEKY 109 D P+P+ + + ++V ++L I + + K+G + I IPC+E + +GSC Y E L K+ Sbjct: 1050 DIYPFPMSMCLCKTNYIRIVADLLVTIPLGATISFTIVKEG-IIPITIPCLEWEDWGLVGSCTYDAEEFLSKF 1265
BLAST of EMLSAG00000007327 vs. C. finmarchicus
Match: gi|592805766|gb|GAXK01148802.1| (TSA: Calanus finmarchicus comp742106_c0_seq1 transcribed RNA sequence) HSP 1 Score: 47.7506 bits (112), Expect = 1.441e-6 Identity = 22/69 (31.88%), Postives = 41/69 (59.42%), Query Frame = 0 Query: 40 PYPVRIVSGEQLSTKLVLNVLKEIDGDLEVELKMAKKGALFNIPIPCIEISEGFFLGSCKYKVAELLEK 108 P+P+ +++G ++ + + +E+ V K+ K+ + NIPIPC++I +G +GSC Y V E+L Sbjct: 198 PFPIELLTGHNITFAAQITLTEELPMGTTVHFKLVKQD-IINIPIPCLDI-DGINIGSCSYDVDEILTS 398
BLAST of EMLSAG00000007327 vs. C. finmarchicus
Match: gi|592805765|gb|GAXK01148803.1| (TSA: Calanus finmarchicus comp742106_c0_seq2 transcribed RNA sequence) HSP 1 Score: 45.8246 bits (107), Expect = 2.298e-6 Identity = 21/65 (32.31%), Postives = 39/65 (60.00%), Query Frame = 0 Query: 40 PYPVRIVSGEQLSTKLVLNVLKEIDGDLEVELKMAKKGALFNIPIPCIEISEGFFLGSCKYKVAE 104 P+P+ +++G ++ + + +E+ V K+ K+ + NIPIPC++I +G +GSC Y V E Sbjct: 198 PFPIELLTGHNITFAAQITLTEELPMGTTVHFKLVKQD-IINIPIPCLDI-DGINIGSCSYDVDE 386
BLAST of EMLSAG00000007327 vs. C. finmarchicus
Match: gi|592766305|gb|GAXK01188263.1| (TSA: Calanus finmarchicus comp10513_c1_seq1 transcribed RNA sequence) HSP 1 Score: 47.7506 bits (112), Expect = 2.619e-6 Identity = 28/86 (32.56%), Postives = 47/86 (54.65%), Query Frame = 0 Query: 26 CVEDSAATL---VTDFTPYPVRIVSGEQLSTKLVLNVLKEIDGDLEVELKMAKKGALFNIPIPCIEISEGFFLGSCKYKVAELLEK 108 C E++A L V P+P+ +V+G L ++ + + V++ M +G L NIPIPC+E+ + LGSC+Y + +LL Sbjct: 863 CDENTAKPLSIEVATIEPFPIPLVTGTVLDVNVLFQLNEMCPAGTTVKMAMELQG-LINIPIPCLEVDD-IALGSCEYAIDDLLSA 1114
BLAST of EMLSAG00000007327 vs. C. finmarchicus
Match: gi|592913583|gb|GAXK01044792.1| (TSA: Calanus finmarchicus comp308971_c0_seq1 transcribed RNA sequence) HSP 1 Score: 41.2022 bits (95), Expect = 4.428e-4 Identity = 17/70 (24.29%), Postives = 36/70 (51.43%), Query Frame = 0 Query: 40 PYPVRIVSGEQLSTKLVLNVLKEIDGDLEVELKMAKKGALFNIPIPCIEISEGFFLGSCKYKVAELLEKY 109 PYPV E +S +N+ + I + ++++ K+ ++ +PCI+ +E +GSC Y+ + + Sbjct: 1946 PYPVLFEPNETVSISAWMNLFENITAGSQFKVRITKEDGPISVLMPCIDSNEWGLIGSCDYEGNSFIRHF 2155
BLAST of EMLSAG00000007327 vs. C. finmarchicus
Match: gi|592823663|gb|GAXK01130905.1| (TSA: Calanus finmarchicus comp179071_c0_seq3 transcribed RNA sequence) HSP 1 Score: 38.1206 bits (87), Expect = 1.841e-3 Identity = 18/54 (33.33%), Postives = 30/54 (55.56%), Query Frame = 0 Query: 38 FTPYPVRIVS---GEQLSTKLVLNVLKEIDGDLEVELKMAKKGALFNIPIPCIE 88 F+PYP+ + S G+ ++V KEI + +E+ + + G NIP+PCI Sbjct: 90 FSPYPIVLSSLLPGKTYDVTFAIDVTKEIPAEATIEVMVERVGFYGNIPLPCIH 251
BLAST of EMLSAG00000007327 vs. C. finmarchicus
Match: gi|592823665|gb|GAXK01130903.1| (TSA: Calanus finmarchicus comp179071_c0_seq1 transcribed RNA sequence) HSP 1 Score: 37.7354 bits (86), Expect = 3.146e-3 Identity = 18/54 (33.33%), Postives = 30/54 (55.56%), Query Frame = 0 Query: 38 FTPYPVRIVS---GEQLSTKLVLNVLKEIDGDLEVELKMAKKGALFNIPIPCIE 88 F+PYP+ + S G+ ++V KEI + +E+ + + G NIP+PCI Sbjct: 90 FSPYPIVLSSLLPGKTYDVTFAIDVTKEIPAEATIEVMVERVGFYGNIPLPCIH 251
BLAST of EMLSAG00000007327 vs. L. salmonis peptides
Match: EMLSAP00000007327 (pep:novel supercontig:LSalAtl2s:LSalAtl2s412:163825:164621:1 gene:EMLSAG00000007327 transcript:EMLSAT00000007327 description:"maker-LSalAtl2s412-augustus-gene-1.19") HSP 1 Score: 220.32 bits (560), Expect = 3.632e-74 Identity = 110/110 (100.00%), Postives = 110/110 (100.00%), Query Frame = 0 Query: 1 MKFIAVLGLLIAGASALSVEIPWDTCVEDSAATLVTDFTPYPVRIVSGEQLSTKLVLNVLKEIDGDLEVELKMAKKGALFNIPIPCIEISEGFFLGSCKYKVAELLEKYG 110 MKFIAVLGLLIAGASALSVEIPWDTCVEDSAATLVTDFTPYPVRIVSGEQLSTKLVLNVLKEIDGDLEVELKMAKKGALFNIPIPCIEISEGFFLGSCKYKVAELLEKYG Sbjct: 1 MKFIAVLGLLIAGASALSVEIPWDTCVEDSAATLVTDFTPYPVRIVSGEQLSTKLVLNVLKEIDGDLEVELKMAKKGALFNIPIPCIEISEGFFLGSCKYKVAELLEKYG 110
BLAST of EMLSAG00000007327 vs. L. salmonis peptides
Match: EMLSAP00000008513 (pep:novel supercontig:LSalAtl2s:LSalAtl2s524:35981:36548:-1 gene:EMLSAG00000008513 transcript:EMLSAT00000008513 description:"maker-LSalAtl2s524-augustus-gene-0.17") HSP 1 Score: 92.4337 bits (228), Expect = 4.272e-24 Identity = 47/109 (43.12%), Postives = 68/109 (62.39%), Query Frame = 0 Query: 1 MKFIAVLGLLIAGASALSVEIPWDTCVEDSAATLVTDFTPYPVRIVSGEQLSTKLVLNVLKEIDGDLEVELKMAKKGALFNIPIPCIEISEGFFLGSCKYKVAELLEKY 109 MK IAVL LL S +E W++C D+ +PYP+ +VSG L K + ++ K++DGD++VE+K+ KKG + +IPIPCIE G LG C YK+ E++ KY Sbjct: 1 MKIIAVLALLFIAVSGEDLE--WESCNPDNWGEGNIXLSPYPLPVVSGTSLDVKALFDLHKDLDGDVDVEIKLVKKG-IVSIPIPCIESPSGLHLGXCSYKLEEIVTKY 106
BLAST of EMLSAG00000007327 vs. L. salmonis peptides
Match: EMLSAP00000005216 (pep:novel supercontig:LSalAtl2s:LSalAtl2s27639:2:371:-1 gene:EMLSAG00000005216 transcript:EMLSAT00000005216 description:"maker-LSalAtl2s27639-augustus-gene-0.2") HSP 1 Score: 82.4185 bits (202), Expect = 6.124e-21 Identity = 42/102 (41.18%), Postives = 63/102 (61.76%), Query Frame = 0 Query: 5 AVLGLLIAGASALSVEIPWDTCVEDSAATLVTDFTPYPVRIVSGEQLSTKLVLNVLKEIDGDLEVELKMAKKGALFNIPIPCIEISEGFFLGSCKYKVAELL 106 A+ LL S +E W++C D+ +PYP+ +VSG L K + ++ K++DGD++VELK+ KKG + +IPIPCIE G LGSC YK+ E++ Sbjct: 1 AIFALLFIAVSGEDLE--WESCNPDNLGEGDIALSPYPLPVVSGTSLDLKALFDLHKDLDGDVDVELKLVKKG-IVSIPIPCIESPSGLHLGSCSYKLEEIV 99
BLAST of EMLSAG00000007327 vs. L. salmonis peptides
Match: EMLSAP00000002046 (pep:novel supercontig:LSalAtl2s:LSalAtl2s1371:31599:32602:1 gene:EMLSAG00000002046 transcript:EMLSAT00000002046 description:"maker-LSalAtl2s1371-augustus-gene-0.2") HSP 1 Score: 83.1889 bits (204), Expect = 2.012e-20 Identity = 43/111 (38.74%), Postives = 73/111 (65.77%), Query Frame = 0 Query: 1 MKFIAVLGLLIAGASALSV--EIPWDTCVEDSAATLVTDFTPYPVRIVSGEQLSTKLVLNVLKEIDGDLEVELKMAKKGALFNIPIPCIEISEGFFLGSCKYKVAELLEKY 109 + F A+L ++++ AS+L + ++ ++ C D+ D PYP+ +V G Q+ K + + K++DGD++V++KM K G + +IPIPC+EI G FLGSC YK+ E++ KY Sbjct: 5 LSFCALL-IVVSSASSLKLKDDLGFEPCNLDNWGEGNIDVNPYPLPVVEGTQVDIKALFQLDKKLDGDVDVKIKMVKTG-IISIPIPCLEIRPGVFLGSCDYKLEEIITKY 113
BLAST of EMLSAG00000007327 vs. nr
Match: gi|155966306|gb|ABU41106.1| (hypothetical protein [Lepeophtheirus salmonis]) HSP 1 Score: 92.8189 bits (229), Expect = 3.903e-21 Identity = 47/109 (43.12%), Postives = 68/109 (62.39%), Query Frame = 0 Query: 1 MKFIAVLGLLIAGASALSVEIPWDTCVEDSAATLVTDFTPYPVRIVSGEQLSTKLVLNVLKEIDGDLEVELKMAKKGALFNIPIPCIEISEGFFLGSCKYKVAELLEKY 109 MK IA+ LL S +E W++C D+ +PYP+ +VSG L K + ++ K++DGD++VELK+ KKG + +IPIPCIE G LGSC YK+ E++ KY Sbjct: 1 MKIIAIFALLFIAVSGEDLE--WESCNPDNLGEGDIALSPYPLPVVSGTSLDLKALFDLHKDLDGDVDVELKLVKKG-IVSIPIPCIESPSGLHLGSCSYKLEEIVSKY 106 The following BLAST results are available for this feature:
BLAST of EMLSAG00000007327 vs. GO
Analysis Date: 2014-04-02 (Blast vs. GO) Total hits: 0
BLAST of EMLSAG00000007327 vs. C. finmarchicus
Analysis Date: 2014-05-09 (TblastN vs C. finmarchicus TSA) Total hits: 13
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BLAST of EMLSAG00000007327 vs. L. salmonis peptides
Analysis Date: 2014-05-10 (Blastp vs. self) Total hits: 4
BLAST of EMLSAG00000007327 vs. SwissProt
Analysis Date: 2017-02-10 (Blastp vs. SwissProt) Total hits: 0
BLAST of EMLSAG00000007327 vs. Select Arthropod Genomes
Analysis Date: 2017-02-20 (Blastp vs. Selected Arthropods) Total hits: 0
BLAST of EMLSAG00000007327 vs. nr
Analysis Date: 2017-02-20 (Blastp vs. NR (2/2017)) Total hits: 1
BLAST of EMLSAG00000007327 vs. Tigriopus kingsejongenis genes
Analysis Date: 2018-04-18 (Blastp vs. Tigriopus kingsejongensis proteins) Total hits: 0
Alignments
The following features are aligned
Analyses
This gene is derived from or has results from the following analyses
Properties
Cross References
External references for this gene
Relationships
The following mRNA feature(s) are a part of this gene:
Sequences
The following sequences are available for this feature:
gene from alignment at LSalAtl2s412:163825..164621+ Legend: mRNA Hold the cursor over a type above to highlight its positions in the sequence below.>EMLSAG00000007327-690093 ID=EMLSAG00000007327-690093|Name=EMLSAG00000007327|organism=Lepeophtheirus salmonis|type=gene|length=797bp|location=Sequence derived from alignment at LSalAtl2s412:163825..164621+ (Lepeophtheirus salmonis)back to top Add to Basket
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