EMLSAG00000007347, EMLSAG00000007347-690113 (gene) Lepeophtheirus salmonis
Overview
Associated RNAi Experiments
Nothing found Homology
BLAST of EMLSAG00000007347 vs. GO
Match: - (symbol:CIRBP "Cold-inducible RNA-binding protein" species:9601 "Pongo abelii" [GO:0003730 "mRNA 3'-UTR binding" evidence=ISS] [GO:0005634 "nucleus" evidence=ISS] [GO:0005737 "cytoplasm" evidence=ISS] [GO:0009411 "response to UV" evidence=ISS] [GO:0010494 "cytoplasmic stress granule" evidence=ISS] [GO:0017148 "negative regulation of translation" evidence=ISS] [GO:0030371 "translation repressor activity" evidence=ISS] [GO:0034063 "stress granule assembly" evidence=ISS] [GO:0045727 "positive regulation of translation" evidence=ISS] [GO:0048255 "mRNA stabilization" evidence=ISS] [GO:0070181 "SSU rRNA binding" evidence=ISS] InterPro:IPR000504 InterPro:IPR012677 Pfam:PF00076 PROSITE:PS50102 SMART:SM00360 GO:GO:0005634 GO:GO:0006950 GO:GO:0009411 GO:GO:0005654 GO:GO:0030371 GO:GO:0000166 Gene3D:3.30.70.330 GO:GO:0048255 GO:GO:0003730 GO:GO:0045727 GO:GO:0010494 GO:GO:0034063 HOVERGEN:HBG107480 GO:GO:0070181 KO:K13195 CTD:1153 EMBL:CR857278 RefSeq:NP_001124692.1 ProteinModelPortal:Q5RF83 SMR:Q5RF83 PRIDE:Q5RF83 GeneID:100171539 KEGG:pon:100171539 Uniprot:Q5RF83) HSP 1 Score: 58.5362 bits (140), Expect = 4.663e-10 Identity = 36/93 (38.71%), Postives = 52/93 (55.91%), Query Frame = 0 Query: 6 ETKLFVHGVRDTCPRSVLEDEFSKIGPVTDVYITE-------KGYAFVTMTNSEDADDAARKLNGTTVDGQELKVEIAHGRSRRGSRGGGYRG 91 E KLFV G+ LE FSK G +++V + + +G+ FVT N +DA DA +NG +VDG++++V+ A S SR GYRG Sbjct: 5 EGKLFVGGLSFDTNEQSLEQVFSKYGQISEVVVVKDRETQRSRGFGFVTFENIDDAKDAMMAMNGKSVDGRQIRVDQAGKSSDNRSR--GYRG 95
BLAST of EMLSAG00000007347 vs. GO
Match: - (symbol:CIRBP "Cold-inducible RNA-binding protein" species:9606 "Homo sapiens" [GO:0000166 "nucleotide binding" evidence=IEA] [GO:0003730 "mRNA 3'-UTR binding" evidence=IDA] [GO:0005515 "protein binding" evidence=IPI] [GO:0005634 "nucleus" evidence=ISS;IDA] [GO:0005654 "nucleoplasm" evidence=IEA] [GO:0005737 "cytoplasm" evidence=ISS;IDA] [GO:0009409 "response to cold" evidence=IEA] [GO:0009411 "response to UV" evidence=IDA] [GO:0010494 "cytoplasmic stress granule" evidence=ISS] [GO:0030371 "translation repressor activity" evidence=ISS] [GO:0034063 "stress granule assembly" evidence=ISS] [GO:0044822 "poly(A) RNA binding" evidence=IDA] [GO:0045727 "positive regulation of translation" evidence=IDA] [GO:0048255 "mRNA stabilization" evidence=IDA] [GO:0070181 "SSU rRNA binding" evidence=IDA] InterPro:IPR000504 InterPro:IPR012677 Pfam:PF00076 PROSITE:PS50102 SMART:SM00360 GO:GO:0005634 GO:GO:0009411 GO:GO:0005654 GO:GO:0030371 GO:GO:0000166 GO:GO:0009409 Gene3D:3.30.70.330 GO:GO:0048255 GO:GO:0003730 GO:GO:0045727 GO:GO:0010494 GO:GO:0034063 eggNOG:COG0724 HOVERGEN:HBG107480 GO:GO:0070181 KO:K13195 CTD:1153 EMBL:D78134 EMBL:AF021336 EMBL:AC004258 EMBL:BC000403 EMBL:BC000901 RefSeq:NP_001271.1 UniGene:Hs.618145 UniGene:Hs.634522 PDB:1X5S PDBsum:1X5S ProteinModelPortal:Q14011 SMR:Q14011 BioGrid:107573 IntAct:Q14011 MINT:MINT-5004534 STRING:9606.ENSP00000322887 PhosphoSite:Q14011 DMDM:5921786 REPRODUCTION-2DPAGE:IPI00180954 PaxDb:Q14011 PRIDE:Q14011 DNASU:1153 Ensembl:ENST00000320936 Ensembl:ENST00000585630 Ensembl:ENST00000586472 Ensembl:ENST00000588030 Ensembl:ENST00000588090 Ensembl:ENST00000589660 GeneID:1153 KEGG:hsa:1153 UCSC:uc002lrr.4 GeneCards:GC19P001269 HGNC:HGNC:1982 MIM:602649 neXtProt:NX_Q14011 PharmGKB:PA26519 HOGENOM:HOG000276232 InParanoid:Q14011 OrthoDB:EOG780RPD PhylomeDB:Q14011 ChiTaRS:CIRBP EvolutionaryTrace:Q14011 GeneWiki:CIRBP GenomeRNAi:1153 NextBio:4788 PRO:PR:Q14011 ArrayExpress:Q14011 Bgee:Q14011 CleanEx:HS_CIRBP Genevestigator:Q14011 Uniprot:Q14011) HSP 1 Score: 58.5362 bits (140), Expect = 4.663e-10 Identity = 36/93 (38.71%), Postives = 52/93 (55.91%), Query Frame = 0 Query: 6 ETKLFVHGVRDTCPRSVLEDEFSKIGPVTDVYITE-------KGYAFVTMTNSEDADDAARKLNGTTVDGQELKVEIAHGRSRRGSRGGGYRG 91 E KLFV G+ LE FSK G +++V + + +G+ FVT N +DA DA +NG +VDG++++V+ A S SR GYRG Sbjct: 5 EGKLFVGGLSFDTNEQSLEQVFSKYGQISEVVVVKDRETQRSRGFGFVTFENIDDAKDAMMAMNGKSVDGRQIRVDQAGKSSDNRSR--GYRG 95
BLAST of EMLSAG00000007347 vs. GO
Match: - (symbol:CIRBP "Cold-inducible RNA-binding protein" species:9606 "Homo sapiens" [GO:0000166 "nucleotide binding" evidence=IEA] [GO:0003676 "nucleic acid binding" evidence=IEA] [GO:0009409 "response to cold" evidence=IEA] [GO:0010494 "cytoplasmic stress granule" evidence=IEA] [GO:0030371 "translation repressor activity" evidence=IEA] [GO:0034063 "stress granule assembly" evidence=IEA] InterPro:IPR000504 InterPro:IPR012677 Pfam:PF00076 PROSITE:PS50102 SMART:SM00360 GO:GO:0030371 GO:GO:0000166 GO:GO:0009409 Gene3D:3.30.70.330 GO:GO:0003676 EMBL:AC004221 GO:GO:0010494 GO:GO:0034063 EMBL:AC004258 HGNC:HGNC:1982 ProteinModelPortal:K7EJV5 Ensembl:ENST00000588411 ArrayExpress:K7EJV5 Uniprot:K7EJV5) HSP 1 Score: 57.7658 bits (138), Expect = 4.836e-10 Identity = 37/97 (38.14%), Postives = 53/97 (54.64%), Query Frame = 0 Query: 6 ETKLFVHGVRDTCPRSVLEDEFSKIGPVTDVYITE-------KGYAFVTMTNSEDADDAARKLNGTTVDGQELKVEIAHGRS---RRGSRGGGYRGR 92 E KLFV G+ LE FSK G +++V + + +G+ FVT N +DA DA +NG +VDG++++V+ A S RG RGG GR Sbjct: 5 EGKLFVGGLSFDTNEQSLEQVFSKYGQISEVVVVKDRETQRSRGFGFVTFENIDDAKDAMMAMNGKSVDGRQIRVDQAGKSSDNRSRGYRGGSAGGR 101
BLAST of EMLSAG00000007347 vs. GO
Match: - (symbol:CIRBP "Uncharacterized protein" species:9031 "Gallus gallus" [GO:0000166 "nucleotide binding" evidence=IEA] [GO:0003676 "nucleic acid binding" evidence=IEA] InterPro:IPR000504 InterPro:IPR012677 Pfam:PF00076 PROSITE:PS50102 SMART:SM00360 GO:GO:0000166 Gene3D:3.30.70.330 GO:GO:0003676 HOVERGEN:HBG107480 KO:K13195 CTD:1153 HOGENOM:HOG000276232 OrthoDB:EOG780RPD GeneTree:ENSGT00710000106295 TreeFam:TF354331 EMBL:AADN03008886 EMBL:AADN03008984 EMBL:KC905084 EMBL:AJ719636 RefSeq:NP_001026518.1 UniGene:Gga.42673 ProteinModelPortal:Q5ZLU8 SMR:Q5ZLU8 PRIDE:Q5ZLU8 Ensembl:ENSGALT00000019966 GeneID:425789 KEGG:gga:425789 InParanoid:Q5ZLU8 NextBio:20827653 PRO:PR:Q5ZLU8 ArrayExpress:Q5ZLU8 Uniprot:Q5ZLU8) HSP 1 Score: 58.5362 bits (140), Expect = 5.079e-10 Identity = 36/93 (38.71%), Postives = 52/93 (55.91%), Query Frame = 0 Query: 6 ETKLFVHGVRDTCPRSVLEDEFSKIGPVTDVYITE-------KGYAFVTMTNSEDADDAARKLNGTTVDGQELKVEIAHGRSRRGSRGGGYRG 91 E KLFV G+ LE FSK G +++V + + +G+ FVT N +DA DA +NG +VDG++++V+ A S SR GYRG Sbjct: 5 EGKLFVGGLSFDTNEQSLEQVFSKYGQISEVVVVKDRETQRSRGFGFVTFENIDDAKDAMMAMNGKSVDGRQIRVDQAGKSSENRSR--GYRG 95
BLAST of EMLSAG00000007347 vs. GO
Match: - (symbol:CIRBP "Uncharacterized protein" species:9615 "Canis lupus familiaris" [GO:0000166 "nucleotide binding" evidence=IEA] [GO:0003730 "mRNA 3'-UTR binding" evidence=IEA] [GO:0009411 "response to UV" evidence=IEA] [GO:0010494 "cytoplasmic stress granule" evidence=IEA] [GO:0030371 "translation repressor activity" evidence=IEA] [GO:0034063 "stress granule assembly" evidence=IEA] [GO:0045727 "positive regulation of translation" evidence=IEA] [GO:0048255 "mRNA stabilization" evidence=IEA] [GO:0070181 "SSU rRNA binding" evidence=IEA] InterPro:IPR000504 InterPro:IPR012677 Pfam:PF00076 PROSITE:PS50102 SMART:SM00360 GO:GO:0009411 GO:GO:0030371 GO:GO:0000166 Gene3D:3.30.70.330 GO:GO:0048255 GO:GO:0003730 GO:GO:0045727 GO:GO:0010494 GO:GO:0034063 GO:GO:0070181 KO:K13195 GeneTree:ENSGT00710000106295 OMA:YNSRSQG TreeFam:TF354331 EMBL:AAEX03012655 RefSeq:XP_005633195.1 RefSeq:XP_005633196.1 RefSeq:XP_005633197.1 RefSeq:XP_005633198.1 RefSeq:XP_005633199.1 RefSeq:XP_005633200.1 RefSeq:XP_005633201.1 Ensembl:ENSCAFT00000031013 GeneID:476755 Uniprot:F6XHA7) HSP 1 Score: 58.5362 bits (140), Expect = 5.454e-10 Identity = 36/93 (38.71%), Postives = 52/93 (55.91%), Query Frame = 0 Query: 6 ETKLFVHGVRDTCPRSVLEDEFSKIGPVTDVYITE-------KGYAFVTMTNSEDADDAARKLNGTTVDGQELKVEIAHGRSRRGSRGGGYRG 91 E KLFV G+ LE FSK G +++V + + +G+ FVT N +DA DA +NG +VDG++++V+ A S SR GYRG Sbjct: 5 EGKLFVGGLSFDTNEQSLEQVFSKYGQISEVVVVKDRETQRSRGFGFVTFENIDDAKDAMMAMNGKSVDGRQIRVDQAGKSSDNRSR--GYRG 95
BLAST of EMLSAG00000007347 vs. C. finmarchicus
Match: gi|592779045|gb|GAXK01175523.1| (TSA: Calanus finmarchicus comp2654_c1_seq1 transcribed RNA sequence) HSP 1 Score: 78.1814 bits (191), Expect = 3.794e-17 Identity = 40/75 (53.33%), Postives = 49/75 (65.33%), Query Frame = 0 Query: 3 SEGETKLFVHGVRDTCPRSVLEDEFSKIGPVTDVYITEKGYAFVTMTNSEDADDAARKLNGTTVDGQELKVEIAH 77 SE KLFV+GV P+ L+ EF + G VTD Y + KGYAF+T E+AD A LNGTTV GQE+KV+IA Sbjct: 283 SEEGCKLFVYGVATQTPKEDLQTEFERFGSVTDAYNSGKGYAFITYETKEEADQAKEMLNGTTVCGQEIKVDIAK 507
BLAST of EMLSAG00000007347 vs. C. finmarchicus
Match: gi|592779046|gb|GAXK01175522.1| (TSA: Calanus finmarchicus comp2654_c0_seq1 transcribed RNA sequence) HSP 1 Score: 78.1814 bits (191), Expect = 4.056e-17 Identity = 40/75 (53.33%), Postives = 49/75 (65.33%), Query Frame = 0 Query: 3 SEGETKLFVHGVRDTCPRSVLEDEFSKIGPVTDVYITEKGYAFVTMTNSEDADDAARKLNGTTVDGQELKVEIAH 77 SE KLFV+GV P+ L+ EF + G VTD Y + KGYAF+T E+AD A LNGTTV GQE+KV+IA Sbjct: 148 SEEGCKLFVYGVATQTPKEDLQTEFERFGSVTDAYNSGKGYAFITYETKEEADQAKEMLNGTTVCGQEIKVDIAK 372
BLAST of EMLSAG00000007347 vs. C. finmarchicus
Match: gi|592766328|gb|GAXK01188240.1| (TSA: Calanus finmarchicus comp10430_c0_seq1 transcribed RNA sequence) HSP 1 Score: 77.0258 bits (188), Expect = 9.383e-17 Identity = 37/70 (52.86%), Postives = 47/70 (67.14%), Query Frame = 0 Query: 8 KLFVHGVRDTCPRSVLEDEFSKIGPVTDVYITEKGYAFVTMTNSEDADDAARKLNGTTVDGQELKVEIAH 77 KLFV+GV + S L+ EF K G VTD Y T KGYAFVT N +DA +A +LNG T+ GQ++KV +A Sbjct: 181 KLFVYGVNEGTSNSELQTEFEKFGTVTDTYNTGKGYAFVTFDNKDDASEATEQLNGATILGQQVKVNVAR 390
BLAST of EMLSAG00000007347 vs. C. finmarchicus
Match: gi|592786330|gb|GAXK01168238.1| (TSA: Calanus finmarchicus comp862_c1_seq1 transcribed RNA sequence) HSP 1 Score: 73.559 bits (179), Expect = 1.299e-15 Identity = 37/69 (53.62%), Postives = 46/69 (66.67%), Query Frame = 0 Query: 8 KLFVHGVRDTCPRSVLEDEFSKIGPVTDVYITEKGYAFVTMTNSEDADDAARKLNGTTVDGQELKVEIA 76 KLFV+GV + S L+++F K G VTD Y T KGYAFVT N E A +A+ +LNG V GQ LKV +A Sbjct: 405 KLFVYGVNEGTSNSELQEQFEKFGTVTDTYNTGKGYAFVTYDNKESAAEASERLNGQEVLGQVLKVNVA 611
BLAST of EMLSAG00000007347 vs. C. finmarchicus
Match: gi|592785473|gb|GAXK01169095.1| (TSA: Calanus finmarchicus comp1623_c1_seq1 transcribed RNA sequence) HSP 1 Score: 71.633 bits (174), Expect = 6.949e-15 Identity = 37/70 (52.86%), Postives = 46/70 (65.71%), Query Frame = 0 Query: 8 KLFVHGVRDTCPRSVLEDEFSKIGPVTDVYITEKGYAFVTMTNSEDADDAARKLNGTTVDGQELKVEIAH 77 KLFV+GV + S L+ EF K G VTD Y T KGYAFVT + + A +A+ KLNG V GQ+LKV +A Sbjct: 405 KLFVYGVNEGTSNSELQAEFEKFGTVTDTYNTGKGYAFVTFEDKDAAAEASDKLNGQEVLGQQLKVNVAR 614
BLAST of EMLSAG00000007347 vs. C. finmarchicus
Match: gi|592821267|gb|GAXK01133301.1| (TSA: Calanus finmarchicus comp27914_c0_seq1 transcribed RNA sequence) HSP 1 Score: 72.0182 bits (175), Expect = 1.421e-14 Identity = 34/74 (45.95%), Postives = 52/74 (70.27%), Query Frame = 0 Query: 6 ETKLFVHGVRDTCPRSVLEDEFSKIGPVTDVYITEK--GYAFVTMTNSEDADDAARKLNGTTVDGQELKVEIAH 77 + K+++ G+RD R LED F+K GPV DV++ + G+AFV M ++ DA+DAAR L+GT V G +KVE+++ Sbjct: 436 DCKIYIGGLRDDANRYDLEDAFAKYGPVRDVWVARRPPGFAFVEMEDARDAEDAARGLDGTRVCGSRVKVEMSN 657
BLAST of EMLSAG00000007347 vs. C. finmarchicus
Match: gi|592788500|gb|GAXK01166068.1| (TSA: Calanus finmarchicus comp99_c0_seq1 transcribed RNA sequence) HSP 1 Score: 71.2478 bits (173), Expect = 2.144e-14 Identity = 37/77 (48.05%), Postives = 49/77 (63.64%), Query Frame = 0 Query: 1 MPSEGETKLFVHGVRDTCPRSVLEDEFSKIGPVTDVYITEKGYAFVTMTNSEDADDAARKLNGTTVDGQELKVEIAH 77 M +G KLF++GV L+ EF K G VTDVY T KG+AFVT EDA+ A ++++G TV+GQ+LKV A Sbjct: 94 MAEQG-CKLFIYGVDQNMANGDLQAEFEKFGMVTDVYNTGKGFAFVTFDRKEDAETATQQMDGQTVNGQQLKVNEAR 321
BLAST of EMLSAG00000007347 vs. C. finmarchicus
Match: gi|592788498|gb|GAXK01166070.1| (TSA: Calanus finmarchicus comp99_c2_seq1 transcribed RNA sequence) HSP 1 Score: 69.3218 bits (168), Expect = 1.138e-13 Identity = 36/77 (46.75%), Postives = 49/77 (63.64%), Query Frame = 0 Query: 1 MPSEGETKLFVHGVRDTCPRSVLEDEFSKIGPVTDVYITEKGYAFVTMTNSEDADDAARKLNGTTVDGQELKVEIAH 77 M +G KLF++GV L+ EF K G VTDVY T KG+AFVT EDA+ A ++++G TV+GQ++KV A Sbjct: 631 MAEQG-CKLFIYGVDQNMANGDLQAEFEKFGMVTDVYNTGKGFAFVTFDRKEDAETATQEMDGQTVNGQQIKVNEAR 858
BLAST of EMLSAG00000007347 vs. C. finmarchicus
Match: gi|592785791|gb|GAXK01168777.1| (TSA: Calanus finmarchicus comp522_c1_seq1 transcribed RNA sequence) HSP 1 Score: 71.2478 bits (173), Expect = 1.487e-13 Identity = 38/74 (51.35%), Postives = 46/74 (62.16%), Query Frame = 0 Query: 3 SEGETKLFVHGVRDTCPRSVLEDEFSKIGPVTDVYITEKGYAFVTMTNSEDADDAARKLNGTTVDGQELKVEIA 76 +E KLFV+GV + L++EF K G VTD Y T KGYAFVT N E A +A +LNG V GQ LKV +A Sbjct: 1649 AEEGCKLFVYGVNEGTSNHELQEEFEKFGTVTDTYNTGKGYAFVTFDNKESASEATERLNGQEVLGQVLKVNVA 1870
BLAST of EMLSAG00000007347 vs. C. finmarchicus
Match: gi|592892789|gb|GAXK01065586.1| (TSA: Calanus finmarchicus comp5858_c0_seq1 transcribed RNA sequence) HSP 1 Score: 67.3958 bits (163), Expect = 4.069e-13 Identity = 33/74 (44.59%), Postives = 49/74 (66.22%), Query Frame = 0 Query: 6 ETKLFVHGVRDTCPRSVLEDEFSKIGPVTDVYITEK--GYAFVTMTNSEDADDAARKLNGTTVDGQELKVEIAH 77 E K+++ G+RD R +ED F KIG V DV++ K G+AFV M + DA DA R+L+GT + G +KVE+++ Sbjct: 614 ECKVYIGGLRDDANRYDIEDTFRKIGKVKDVWVARKPPGFAFVEMEDPRDAQDAVRELDGTRMCGARVKVEMSN 835
BLAST of EMLSAG00000007347 vs. L. salmonis peptides
Match: EMLSAP00000007347 (pep:novel supercontig:LSalAtl2s:LSalAtl2s4162:3600:4079:1 gene:EMLSAG00000007347 transcript:EMLSAT00000007347 description:"augustus_masked-LSalAtl2s4162-processed-gene-0.0") HSP 1 Score: 305.834 bits (782), Expect = 3.233e-107 Identity = 159/159 (100.00%), Postives = 159/159 (100.00%), Query Frame = 0 Query: 1 MPSEGETKLFVHGVRDTCPRSVLEDEFSKIGPVTDVYITEKGYAFVTMTNSEDADDAARKLNGTTVDGQELKVEIAHGRSRRGSRGGGYRGRFGGNDRGRFEGGGRYHDNNERSERRSYGDRGDRGDRDDRGGRDDRRDCGDRRDRGDRRDHGGERGGY 159 MPSEGETKLFVHGVRDTCPRSVLEDEFSKIGPVTDVYITEKGYAFVTMTNSEDADDAARKLNGTTVDGQELKVEIAHGRSRRGSRGGGYRGRFGGNDRGRFEGGGRYHDNNERSERRSYGDRGDRGDRDDRGGRDDRRDCGDRRDRGDRRDHGGERGGY Sbjct: 1 MPSEGETKLFVHGVRDTCPRSVLEDEFSKIGPVTDVYITEKGYAFVTMTNSEDADDAARKLNGTTVDGQELKVEIAHGRSRRGSRGGGYRGRFGGNDRGRFEGGGRYHDNNERSERRSYGDRGDRGDRDDRGGRDDRRDCGDRRDRGDRRDHGGERGGY 159
BLAST of EMLSAG00000007347 vs. L. salmonis peptides
Match: EMLSAP00000002556 (pep:novel supercontig:LSalAtl2s:LSalAtl2s1510:24535:24822:1 gene:EMLSAG00000002556 transcript:EMLSAT00000002556 description:"augustus_masked-LSalAtl2s1510-processed-gene-0.4") HSP 1 Score: 160.614 bits (405), Expect = 6.516e-51 Identity = 88/94 (93.62%), Postives = 89/94 (94.68%), Query Frame = 0 Query: 1 MPSEGETKLFVHGVRDTCPRSVLEDEFSKIGPVTDVYITEKGYAFVTMTNSEDADDAARKLNGTTVDGQELKVEIAHGRSRRGSRGGGYRGRFG 94 MPSEGETKLFVHGVRDTCPRSVLEDEFSKIGPVTDVYITEKGYAFVTMTNSEDADDAARKLNGTTVDGQELKVEIA GR RRGS GGG GR+G Sbjct: 1 MPSEGETKLFVHGVRDTCPRSVLEDEFSKIGPVTDVYITEKGYAFVTMTNSEDADDAARKLNGTTVDGQELKVEIAXGRGRRGSXGGGXXGRYG 94
BLAST of EMLSAG00000007347 vs. L. salmonis peptides
Match: EMLSAP00000002557 (pep:novel supercontig:LSalAtl2s:LSalAtl2s1510:50770:51213:1 gene:EMLSAG00000002557 transcript:EMLSAT00000002557 description:"augustus_masked-LSalAtl2s1510-processed-gene-0.5") HSP 1 Score: 129.798 bits (325), Expect = 2.680e-38 Identity = 62/77 (80.52%), Postives = 68/77 (88.31%), Query Frame = 0 Query: 1 MPSEGETKLFVHGVRDTCPRSVLEDEFSKIGPVTDVYITEKGYAFVTMTNSEDADDAARKLNGTTVDGQELKVEIAH 77 MPS+ TKLFVHGVRDTCPRSVLEDEF KIGPV DV+ITEKG AFVTM ++EDA+ A RKLNGTTV GQE+KVEIAH Sbjct: 1 MPSQEGTKLFVHGVRDTCPRSVLEDEFGKIGPVADVHITEKGXAFVTMMSAEDAEGAMRKLNGTTVHGQEVKVEIAH 77
BLAST of EMLSAG00000007347 vs. L. salmonis peptides
Match: EMLSAP00000000098 (pep:novel supercontig:LSalAtl2s:LSalAtl2s1017:34509:34836:-1 gene:EMLSAG00000000098 transcript:EMLSAT00000000098 description:"snap_masked-LSalAtl2s1017-processed-gene-0.1") HSP 1 Score: 70.8626 bits (172), Expect = 1.177e-16 Identity = 38/80 (47.50%), Postives = 49/80 (61.25%), Query Frame = 0 Query: 13 GVRDTCPRSVLEDEFSKIGPVTDVYITEKGYAFVTMTNSEDADDAARKLNGTTVDGQELKVEIAHGRSRRGSRGGGYRGR 92 VRDT P SVLED+ S PV +++I EK FVT+ NSEDA+ A KL T V GQE++++I R R G Y+ R Sbjct: 2 SVRDTWPLSVLEDDLSN-NPVANIHIIEKDNVFVTLMNSEDAESAMYKLKSTPVLGQEVEMDIF----LRARRRGKYKSR 76
BLAST of EMLSAG00000007347 vs. L. salmonis peptides
Match: EMLSAP00000005955 (pep:novel supercontig:LSalAtl2s:LSalAtl2s321:630816:639965:-1 gene:EMLSAG00000005955 transcript:EMLSAT00000005955 description:"snap_masked-LSalAtl2s321-processed-gene-6.7") HSP 1 Score: 61.6178 bits (148), Expect = 2.435e-13 Identity = 29/49 (59.18%), Postives = 37/49 (75.51%), Query Frame = 0 Query: 29 KIGPVTDVYITEKGYAFVTMTNSEDADDAARKLNGTTVDGQELKVEIAH 77 KIGPV DV+I EK F TM N+ED + R+LNGTT+ GQ++K+EIAH Sbjct: 13 KIGPVEDVHIKEKDQVFETMRNAEDTEGFMRRLNGTTIPGQDVKMEIAH 61
BLAST of EMLSAG00000007347 vs. L. salmonis peptides
Match: EMLSAP00000007190 (pep:novel supercontig:LSalAtl2s:LSalAtl2s404:347783:355385:1 gene:EMLSAG00000007190 transcript:EMLSAT00000007190 description:"maker-LSalAtl2s404-augustus-gene-3.38") HSP 1 Score: 52.373 bits (124), Expect = 8.008e-9 Identity = 28/77 (36.36%), Postives = 49/77 (63.64%), Query Frame = 0 Query: 7 TKLFVHGVRDTCPRSVLEDEFSKIGPVTDVYIT--EKGYAFVTMTNSEDADDAARKLNGTTVDGQELKVEIAHGRSR 81 K+++ + ++ + LED FSK GP+ +V++ G+AFV + DA+D+ R L+G V GQ ++VE++ G+SR Sbjct: 11 CKVYIGNLGNSASKYELEDAFSKYGPLKNVWVARNPPGFAFVEFEDPRDAEDSVRGLDGXRVCGQRVRVEMSSGQSR 87
BLAST of EMLSAG00000007347 vs. L. salmonis peptides
Match: EMLSAP00000008457 (pep:novel supercontig:LSalAtl2s:LSalAtl2s519:272141:277801:-1 gene:EMLSAG00000008457 transcript:EMLSAT00000008457 description:"maker-LSalAtl2s519-augustus-gene-1.19") HSP 1 Score: 52.7582 bits (125), Expect = 8.587e-9 Identity = 40/124 (32.26%), Postives = 57/124 (45.97%), Query Frame = 0 Query: 23 LEDEFSKIGPVTDVYITEK--GYAFVTMTNSEDADDAARKLNGTTVDGQELKVEIAHGRSR-RGSRGGGYRGR-FGGNDRGRFE---GGGRYHDNNERSERRSYGDRGDRGDRDDRGGRDDRRD 139 +E F K GP+ ++++ +AFV EDA+D R +G + G+ ++V A R++ RG RG R + DRG F +Y S R Y R D DRGG DR D Sbjct: 175 MEKVFGKFGPLKEIWMARSVPCFAFVVFRYREDAEDGXRSADGVEISGRRIRVTHARPRTKGRGRRGFNPNMRCYQCGDRGHFSRDCPDTKYGYKRPPSPR--YSSRRDSDRHYDRGGGYDRFD 296
BLAST of EMLSAG00000007347 vs. L. salmonis peptides
Match: EMLSAP00000009270 (pep:novel supercontig:LSalAtl2s:LSalAtl2s591:151036:155497:-1 gene:EMLSAG00000009270 transcript:EMLSAT00000009270 description:"maker-LSalAtl2s591-augustus-gene-1.13") HSP 1 Score: 51.2174 bits (121), Expect = 1.478e-8 Identity = 24/78 (30.77%), Postives = 47/78 (60.26%), Query Frame = 0 Query: 8 KLFVHGVRDTCPRSVLEDEFSKIGPVTDVYITEKGYAFVTMTNSEDADDAARKLNGTTVDGQELKVEIA--HGRSRRG 83 K+++ + +T +S L EF K G ++D+++ G+A +T ++ ++DA R ++G G +L+VE++ H RRG Sbjct: 4 KIYIGNLNETIRKSELRQEFEKFGEISDLFVNH-GFAHLTYVDTRSSEDAIRIMDGEVFFGSKLRVEMSQDHEEGRRG 80
BLAST of EMLSAG00000007347 vs. SwissProt
Match: gi|284022113|sp|Q925G0.2|RBM3_RAT (RecName: Full=RNA-binding protein 3; AltName: Full=RNA-binding motif protein 3) HSP 1 Score: 75.8702 bits (185), Expect = 7.062e-17 Identity = 44/107 (41.12%), Postives = 64/107 (59.81%), Query Frame = 0 Query: 1 MPSEGETKLFVHGVRDTCPRSVLEDEFSKIGPVTDVYITE-------KGYAFVTMTNSEDADDAARKLNGTTVDGQELKVEIAHGRSRRGSRGGGYRGRFGGNDRGR 100 M SE E KLFV G+ LED FS GP+++V + + +G+ F+T TN E A D R +NG ++DG++++V+ A G+S RG+RGG FG + RGR Sbjct: 1 MSSE-EGKLFVGGLNFNTDEQALEDHFSSFGPISEVVVVKDRETQRSRGFGFITFTNPEHASDVMRAMNGESLDGRQIRVDHA-GKSARGTRGGA----FGAHGRGR 101
BLAST of EMLSAG00000007347 vs. SwissProt
Match: gi|952543496|sp|W8E7I1.2|RBM3_CAPHI (RecName: Full=RNA-binding protein 3; AltName: Full=RNA-binding motif protein 3) HSP 1 Score: 74.7146 bits (182), Expect = 2.017e-16 Identity = 40/96 (41.67%), Postives = 60/96 (62.50%), Query Frame = 0 Query: 1 MPSEGETKLFVHGVRDTCPRSVLEDEFSKIGPVTDVYITE-------KGYAFVTMTNSEDADDAARKLNGTTVDGQELKVEIAHGRSRRGSRGGGY 89 M SE E KLFV G+ LED FS GP+++V + + +G+ F+T TN E A +A R +NG ++DG++++V+ A G+S RGSRGG + Sbjct: 1 MSSE-EGKLFVGGLNFNTDERALEDHFSSFGPISEVVVVKDRETQRSRGFGFITFTNPEHASNAMRAMNGESLDGRQIRVDHA-GKSARGSRGGAF 94
BLAST of EMLSAG00000007347 vs. SwissProt
Match: gi|6093936|sp|O89086.1|RBM3_MOUSE (RecName: Full=RNA-binding protein 3; AltName: Full=RNA-binding motif protein 3) HSP 1 Score: 65.4698 bits (158), Expect = 5.652e-13 Identity = 33/83 (39.76%), Postives = 50/83 (60.24%), Query Frame = 0 Query: 1 MPSEGETKLFVHGVRDTCPRSVLEDEFSKIGPVTDVYITE-------KGYAFVTMTNSEDADDAARKLNGTTVDGQELKVEIA 76 M SE E KLFV G+ LED FS GP+++V + + +G+ F+T TN E A DA R +NG ++DG++++V+ A Sbjct: 1 MSSE-EGKLFVGGLNFNTDEQALEDHFSSFGPISEVVVVKDRETQRSRGFGFITFTNPEHASDAMRAMNGESLDGRQIRVDHA 82
BLAST of EMLSAG00000007347 vs. SwissProt
Match: gi|1710620|sp|P98179.1|RBM3_HUMAN (RecName: Full=RNA-binding protein 3; AltName: Full=RNA-binding motif protein 3; AltName: Full=RNPL) HSP 1 Score: 65.4698 bits (158), Expect = 6.325e-13 Identity = 36/91 (39.56%), Postives = 55/91 (60.44%), Query Frame = 0 Query: 1 MPSEGETKLFVHGVRDTCPRSVLEDEFSKIGPVTDVYITE-------KGYAFVTMTNSEDADDAARKLNGTTVDGQELKVEIAHGRSRRGS 84 M SE E KLFV G+ LED FS GP+++V + + +G+ F+T TN E A A R +NG ++DG++++V+ A G+S RG+ Sbjct: 1 MSSE-EGKLFVGGLNFNTDEQALEDHFSSFGPISEVVVVKDRETQRSRGFGFITFTNPEHASVAMRAMNGESLDGRQIRVDHA-GKSARGT 89
BLAST of EMLSAG00000007347 vs. SwissProt
Match: gi|82241461|sp|Q7ZWA3.1|RBMX_DANRE (RecName: Full=RNA-binding motif protein, X chromosome; AltName: Full=Heterogeneous nuclear ribonucleoprotein G; Short=hnRNP G) HSP 1 Score: 65.4698 bits (158), Expect = 4.743e-12 Identity = 32/76 (42.11%), Postives = 46/76 (60.53%), Query Frame = 0 Query: 8 KLFVHGVRDTCPRSVLEDEFSKIGPVTDVYITE-------KGYAFVTMTNSEDADDAARKLNGTTVDGQELKVEIA 76 KLF+ G+ VLE FSK G +++V + + +G+AFVT N DA DAAR++NG +DG+ +KVE A Sbjct: 9 KLFIGGLNTETSEKVLEAYFSKFGRISEVLLMKDRETNKSRGFAFVTYENPGDAKDAAREMNGKPLDGKPIKVEQA 84
BLAST of EMLSAG00000007347 vs. SwissProt
Match: gi|46395643|sp|P60826.1|CIRBP_CRIGR (RecName: Full=Cold-inducible RNA-binding protein; AltName: Full=A18 hnRNP; AltName: Full=Glycine-rich RNA-binding protein CIRP >gi|46397383|sp|P60825.1|CIRBP_RAT RecName: Full=Cold-inducible RNA-binding protein; AltName: Full=A18 hnRNP; AltName: Full=Glycine-rich RNA-binding protein CIRP >gi|46397384|sp|P60824.1|CIRBP_MOUSE RecName: Full=Cold-inducible RNA-binding protein; AltName: Full=A18 hnRNP; AltName: Full=Glycine-rich RNA-binding protein CIRP) HSP 1 Score: 59.3066 bits (142), Expect = 2.128e-10 Identity = 36/93 (38.71%), Postives = 52/93 (55.91%), Query Frame = 0 Query: 6 ETKLFVHGVRDTCPRSVLEDEFSKIGPVTDVYITE-------KGYAFVTMTNSEDADDAARKLNGTTVDGQELKVEIAHGRSRRGSRGGGYRG 91 E KLFV G+ LE FSK G +++V + + +G+ FVT N +DA DA +NG +VDG++++V+ A S SR GYRG Sbjct: 5 EGKLFVGGLSFDTNEQALEQVFSKYGQISEVVVVKDRETQRSRGFGFVTFENIDDAKDAMMAMNGKSVDGRQIRVDQAGKSSDNRSR--GYRG 95
BLAST of EMLSAG00000007347 vs. SwissProt
Match: gi|166199747|sp|Q15415.2|RBY1F_HUMAN (RecName: Full=RNA-binding motif protein, Y chromosome, family 1 member F/J; AltName: Full=Y chromosome RNA recognition motif 2) HSP 1 Score: 60.4622 bits (145), Expect = 3.367e-10 Identity = 27/75 (36.00%), Postives = 46/75 (61.33%), Query Frame = 0 Query: 8 KLFVHGVRDTCPRSVLEDEFSKIGPVTDVYITE------KGYAFVTMTNSEDADDAARKLNGTTVDGQELKVEIA 76 KLF+ G+ +L+ F K GP+++V + + +G+AF+T N DA +AA+ +NGT++ G+ +KVE A Sbjct: 9 KLFIGGLNRETNEKMLKAVFGKHGPISEVLLIKDRTSKSRGFAFITFENPADAKNAAKDMNGTSLHGKAIKVEQA 83
BLAST of EMLSAG00000007347 vs. SwissProt
Match: gi|82236857|sp|Q6IRQ4.1|RBMX_XENLA (RecName: Full=RNA-binding motif protein, X chromosome; AltName: Full=Heterogeneous nuclear ribonucleoprotein G; Short=hnRNP G) HSP 1 Score: 60.4622 bits (145), Expect = 3.371e-10 Identity = 31/76 (40.79%), Postives = 43/76 (56.58%), Query Frame = 0 Query: 8 KLFVHGVRDTCPRSVLEDEFSKIGPVTDVYITE-------KGYAFVTMTNSEDADDAARKLNGTTVDGQELKVEIA 76 KLF+ G+ LE F K G V +V + + +G+AFVT + DA DAAR+LNG +DG+ +KVE A Sbjct: 9 KLFIGGLNTETNEKALEAVFCKYGRVVEVLLMKDRETNKSRGFAFVTFESPADAKDAARELNGKALDGKPIKVEQA 84
BLAST of EMLSAG00000007347 vs. SwissProt
Match: gi|5921786|sp|Q14011.1|CIRBP_HUMAN (RecName: Full=Cold-inducible RNA-binding protein; AltName: Full=A18 hnRNP; AltName: Full=Glycine-rich RNA-binding protein CIRP >gi|75070980|sp|Q5RF83.1|CIRBP_PONAB RecName: Full=Cold-inducible RNA-binding protein; AltName: Full=Glycine-rich RNA-binding protein CIRP) HSP 1 Score: 58.5362 bits (140), Expect = 3.464e-10 Identity = 36/93 (38.71%), Postives = 52/93 (55.91%), Query Frame = 0 Query: 6 ETKLFVHGVRDTCPRSVLEDEFSKIGPVTDVYITE-------KGYAFVTMTNSEDADDAARKLNGTTVDGQELKVEIAHGRSRRGSRGGGYRG 91 E KLFV G+ LE FSK G +++V + + +G+ FVT N +DA DA +NG +VDG++++V+ A S SR GYRG Sbjct: 5 EGKLFVGGLSFDTNEQSLEQVFSKYGQISEVVVVKDRETQRSRGFGFVTFENIDDAKDAMMAMNGKSVDGRQIRVDQAGKSSDNRSR--GYRG 95
BLAST of EMLSAG00000007347 vs. SwissProt
Match: gi|123910273|sp|Q28IQ9.1|CIRBP_XENTR (RecName: Full=Cold-inducible RNA-binding protein; AltName: Full=Glycine-rich RNA-binding protein CIRP) HSP 1 Score: 57.7658 bits (138), Expect = 5.669e-10 Identity = 31/78 (39.74%), Postives = 44/78 (56.41%), Query Frame = 0 Query: 6 ETKLFVHGVRDTCPRSVLEDEFSKIGPVTDVYITE-------KGYAFVTMTNSEDADDAARKLNGTTVDGQELKVEIA 76 E KLFV G+ LE FSK G V +V + + +G+ FVT N EDA DA +NG +VDG++++V+ A Sbjct: 5 EGKLFVGGLNFETTEESLEQVFSKYGQVAEVVVVKDRESKRSRGFGFVTFENPEDAKDAMMAMNGKSVDGRQIRVDQA 82
BLAST of EMLSAG00000007347 vs. Select Arthropod Genomes
Match: gb|KPM03387.1| (RNA-binding protein-like protein 3 [Sarcoptes scabiei]) HSP 1 Score: 63.1586 bits (152), Expect = 7.978e-13 Identity = 29/75 (38.67%), Postives = 51/75 (68.00%), Query Frame = 0 Query: 6 ETKLFVHGVRDTCPRSVLEDEFSKIGPVTDVYIT--EKGYAFVTMTNSEDADDAARKLNGTTVDGQELKVEIAHG 78 + K++V ++D C +S +E+ FSK GP+ +V++ G+AFV +S DA+D+ R L+GT + G ++VE++HG Sbjct: 11 DCKVYVGNLQDNCLKSDVENAFSKFGPLKNVWVARNPPGFAFVEFEDSRDAEDSVRALDGTRIGGNRVRVEMSHG 85
BLAST of EMLSAG00000007347 vs. Select Arthropod Genomes
Match: gb|EFA02018.1| (RNA-binding protein Rsf1-like Protein [Tribolium castaneum]) HSP 1 Score: 58.9214 bits (141), Expect = 1.757e-10 Identity = 30/79 (37.97%), Postives = 45/79 (56.96%), Query Frame = 0 Query: 4 EGETKLFVHGVRDTCPRSVLEDEFSKIGPVTDVYIT--EKGYAFVTMTNSEDADDAARKLNGTTVDGQELKVEIAHGRS 80 E +++V G+ D+ + LE EF K G + V++ G+AF+ N DA+ A LNGT G +L+VEIA G+S Sbjct: 6 ERSARVYVGGLTDSVKKEDLETEFEKYGKLNSVWVAFNPPGFAFIEFINHSDAESACDSLNGTDFLGSKLRVEIARGKS 84
BLAST of EMLSAG00000007347 vs. Select Arthropod Genomes
Match: gb|KFM74863.1| (Serine/arginine-rich splicing factor 7, partial [Stegodyphus mimosarum]) HSP 1 Score: 56.9954 bits (136), Expect = 7.036e-10 Identity = 37/100 (37.00%), Postives = 58/100 (58.00%), Query Frame = 0 Query: 23 LEDEFSKIGPVTDVYIT--EKGYAFVTMTNSEDADDAARKLNGTTVDGQELKVEIAHGRSRRGSRGGGYRGRFGGNDRGRFEGG--GRYHDNNERSERRS 118 +ED FS GP+ +V++ G+AFV +S DA DA R L+G + G+ ++VE++ GR+R RG R F +DR ++ G G Y + +R +RS Sbjct: 29 IEDVFSYYGPLRNVWVARNPPGFAFVEFEDSRDARDAVRALDGKLLCGRRVRVELSTGRTRNSFRGPPPRP-FHPDDRC-YDCGERGHYARDCKRVSKRS 126
BLAST of EMLSAG00000007347 vs. Select Arthropod Genomes
Match: gb|KFM68489.1| (RNA-binding protein Rsf1, partial [Stegodyphus mimosarum]) HSP 1 Score: 56.6102 bits (135), Expect = 7.506e-10 Identity = 24/72 (33.33%), Postives = 47/72 (65.28%), Query Frame = 0 Query: 7 TKLFVHGVRDTCPRSVLEDEFSKIGPVTDVYIT--EKGYAFVTMTNSEDADDAARKLNGTTVDGQELKVEIA 76 ++V G+ + + LE EFSK G +T V++ G+AF+ + +DA++A +++NG T++G E++V+I+ Sbjct: 4 ASVYVGGLSEDIQKEDLEREFSKFGNLTKVWVARNPPGFAFIEFEDDQDANEAIKEMNGATINGSEIRVDIS 75
BLAST of EMLSAG00000007347 vs. Select Arthropod Genomes
Match: gb|EFA08785.1| (RNA-binding protein lark-like Protein [Tribolium castaneum]) HSP 1 Score: 58.151 bits (139), Expect = 9.463e-10 Identity = 29/81 (35.80%), Postives = 46/81 (56.79%), Query Frame = 0 Query: 2 PSEGETKLFVHGVRDTCPRSVLEDEFSKIGPVTDVYITEKGYAFVTMTNSEDADDAARKLNGTTVDGQELKVEIAHGRSRR 82 P TK+FV + D + + F K G V + I + Y FV + +S D ++A ++LNGT VDGQ +KV+++ R R+ Sbjct: 84 PQTPTTKIFVGNLTDNTKAPQIRELFKKYGTVVECDIV-RNYGFVHLESSGDVNEAIKELNGTLVDGQPMKVQVSTSRVRQ 163
BLAST of EMLSAG00000007347 vs. Select Arthropod Genomes
Match: gb|KFM73334.1| (Serine/arginine-rich splicing factor 7, partial [Stegodyphus mimosarum]) HSP 1 Score: 56.225 bits (134), Expect = 1.102e-9 Identity = 30/82 (36.59%), Postives = 50/82 (60.98%), Query Frame = 0 Query: 6 ETKLFVHGVRDTCPRSVLEDEFSKIGPVTDVYIT--EKGYAFVTMTNSEDADDAARKLNGTTVDGQELKVEIAHGRSRRGSR 85 + K++V + ++ R LED FS GP+ +V++ G+AFV +S DA DA R L+G + G+ ++VE++ G+SR R Sbjct: 11 DCKVYVGELGNSGTRHELEDAFSYYGPLRNVWVARNPPGFAFVEFEDSRDARDAVRALDGKILCGRRVRVELSSGKSRSSYR 92
BLAST of EMLSAG00000007347 vs. Select Arthropod Genomes
Match: EAA43387.4 (AGAP009142-PA, partial [Anopheles gambiae str. PEST]) HSP 1 Score: 55.8398 bits (133), Expect = 2.316e-9 Identity = 31/84 (36.90%), Postives = 48/84 (57.14%), Query Frame = 0 Query: 7 TKLFVHGVRDTCPRSVLEDEFSKIGPVTDVYIT--EKGYAFVTMTNSEDADDAARKLNGTTVDGQELKVEIAHGR--SRRGSRG 86 T+++V + D + LE EF+K G + V++ G+AF+ N E+A+ A LNG + G +L+VEI+ GR R SRG Sbjct: 10 TRVYVGNLTDKVKKEDLEGEFTKYGKLNSVWVAFNPPGFAFIEFENKEEAETACDNLNGQDILGSKLRVEISKGRRNPRGASRG 93
BLAST of EMLSAG00000007347 vs. Select Arthropod Genomes
Match: XP_016771614.1 (PREDICTED: RNA-binding protein lark isoform X5 [Apis mellifera]) HSP 1 Score: 56.9954 bits (136), Expect = 2.329e-9 Identity = 29/81 (35.80%), Postives = 46/81 (56.79%), Query Frame = 0 Query: 2 PSEGETKLFVHGVRDTCPRSVLEDEFSKIGPVTDVYITEKGYAFVTMTNSEDADDAARKLNGTTVDGQELKVEIAHGRSRR 82 P+ TK+FV + D + + F+K G V + I + Y FV + + D +DA ++LNG VDGQ +KV+I+ R R+ Sbjct: 84 PNTPTTKIFVGNLTDNTKAPQVRELFAKYGTVVECDIV-RNYGFVHLEATGDVNDAIKELNGRMVDGQAMKVQISTSRVRQ 163 HSP 2 Score: 50.447 bits (119), Expect = 3.817e-7 Identity = 32/87 (36.78%), Postives = 45/87 (51.72%), Query Frame = 0 Query: 1 MP---SEGETKLFVHGVRDTCPRSVLEDEFSKIGPVTDVYITEKGYAFVTMTNSEDADDAARKLNGTTVDGQELKVEIAHGRSRRGS 84 MP S G K+F+ + D + ++ F K G V + + K Y FV M N E +A + LNG V GQE+K E A +SR+G Sbjct: 1 MPGFSSVGTFKIFIGNLADKTTNADIKPLFEKYGKVVECDVV-KNYGFVHMENEEAGRNAIQNLNGHIVHGQEIKCEAA--KSRKGP 84
BLAST of EMLSAG00000007347 vs. Select Arthropod Genomes
Match: XP_016771617.1 (PREDICTED: RNA-binding protein lark isoform X8 [Apis mellifera]) HSP 1 Score: 56.6102 bits (135), Expect = 2.641e-9 Identity = 29/81 (35.80%), Postives = 46/81 (56.79%), Query Frame = 0 Query: 2 PSEGETKLFVHGVRDTCPRSVLEDEFSKIGPVTDVYITEKGYAFVTMTNSEDADDAARKLNGTTVDGQELKVEIAHGRSRR 82 P+ TK+FV + D + + F+K G V + I + Y FV + + D +DA ++LNG VDGQ +KV+I+ R R+ Sbjct: 84 PNTPTTKIFVGNLTDNTKAPQVRELFAKYGTVVECDIV-RNYGFVHLEATGDVNDAIKELNGRMVDGQAMKVQISTSRVRQ 163 HSP 2 Score: 50.447 bits (119), Expect = 4.206e-7 Identity = 32/87 (36.78%), Postives = 45/87 (51.72%), Query Frame = 0 Query: 1 MP---SEGETKLFVHGVRDTCPRSVLEDEFSKIGPVTDVYITEKGYAFVTMTNSEDADDAARKLNGTTVDGQELKVEIAHGRSRRGS 84 MP S G K+F+ + D + ++ F K G V + + K Y FV M N E +A + LNG V GQE+K E A +SR+G Sbjct: 1 MPGFSSVGTFKIFIGNLADKTTNADIKPLFEKYGKVVECDVV-KNYGFVHMENEEAGRNAIQNLNGHIVHGQEIKCEAA--KSRKGP 84
BLAST of EMLSAG00000007347 vs. Select Arthropod Genomes
Match: XP_016771618.1 (PREDICTED: RNA-binding protein lark isoform X9 [Apis mellifera]) HSP 1 Score: 56.6102 bits (135), Expect = 2.667e-9 Identity = 51/168 (30.36%), Postives = 71/168 (42.26%), Query Frame = 0 Query: 2 PSEGETKLFVHGVRDTCPRSVLEDEFSKIGPVTDVYITEKGYAFVTMTNSEDADDAARKLNGTTVDGQELKVEIAHGRSR------------RGSRGG------------------GYRGRFGGND-----------RGRFEGGGRYHDNNERSERRSYGDRGDRGDR 128 P+ TK+FV + D + + F+K G V + I + Y FV + + D +DA ++LNG VDGQ +KV+I+ R R R RGG GYR R G D R R GGGR+ D +RR + D D +R Sbjct: 84 PNTPTTKIFVGNLTDNTKAPQVRELFAKYGTVVECDIV-RNYGFVHLEATGDVNDAIKELNGRMVDGQAMKVQISTSRVRQRPGMGDPEQCYRCGRGGHWSKECPKGGMGGGPDRNGYRDRMFGRDPYPPPPPPPFLRDRLMGGGRFGDYESYYDRRGFEDTRDLYER 250 HSP 2 Score: 50.447 bits (119), Expect = 4.372e-7 Identity = 32/87 (36.78%), Postives = 45/87 (51.72%), Query Frame = 0 Query: 1 MP---SEGETKLFVHGVRDTCPRSVLEDEFSKIGPVTDVYITEKGYAFVTMTNSEDADDAARKLNGTTVDGQELKVEIAHGRSRRGS 84 MP S G K+F+ + D + ++ F K G V + + K Y FV M N E +A + LNG V GQE+K E A +SR+G Sbjct: 1 MPGFSSVGTFKIFIGNLADKTTNADIKPLFEKYGKVVECDVV-KNYGFVHMENEEAGRNAIQNLNGHIVHGQEIKCEAA--KSRKGP 84
BLAST of EMLSAG00000007347 vs. nr
Match: gi|225711820|gb|ACO11756.1| (RNA-binding protein 3 [Lepeophtheirus salmonis] >gi|225712198|gb|ACO11945.1| RNA-binding protein 3 [Lepeophtheirus salmonis]) HSP 1 Score: 162.155 bits (409), Expect = 2.828e-48 Identity = 77/77 (100.00%), Postives = 77/77 (100.00%), Query Frame = 0 Query: 1 MPSEGETKLFVHGVRDTCPRSVLEDEFSKIGPVTDVYITEKGYAFVTMTNSEDADDAARKLNGTTVDGQELKVEIAH 77 MPSEGETKLFVHGVRDTCPRSVLEDEFSKIGPVTDVYITEKGYAFVTMTNSEDADDAARKLNGTTVDGQELKVEIAH Sbjct: 1 MPSEGETKLFVHGVRDTCPRSVLEDEFSKIGPVTDVYITEKGYAFVTMTNSEDADDAARKLNGTTVDGQELKVEIAH 77
BLAST of EMLSAG00000007347 vs. nr
Match: gi|348553582|ref|XP_003462605.1| (PREDICTED: RNA-binding protein 3 isoform X1 [Cavia porcellus] >gi|514446718|ref|XP_005000307.1| PREDICTED: RNA-binding protein 3 isoform X1 [Cavia porcellus]) HSP 1 Score: 79.7221 bits (195), Expect = 5.841e-16 Identity = 46/107 (42.99%), Postives = 67/107 (62.62%), Query Frame = 0 Query: 1 MPSEGETKLFVHGVRDTCPRSVLEDEFSKIGPVTDVYITE-------KGYAFVTMTNSEDADDAARKLNGTTVDGQELKVEIAHGRSRRGSRGGGYRGRFGGNDRGR 100 M SE E KLFV G+ + LED FS GP+++V + + +G+ F+T TN E A DA R +NG ++DG++++V+ A G+S RG+RGG G FG + RGR Sbjct: 1 MSSE-EGKLFVGGLNFSTDEQALEDHFSSFGPISEVVVVKDRETQRSRGFGFITFTNPEHASDAMRAMNGESLDGRQIRVDHA-GKSARGTRGG---GAFGAHGRGR 102
BLAST of EMLSAG00000007347 vs. nr
Match: gi|507654782|ref|XP_004633702.1| (PREDICTED: RNA-binding protein 3 [Octodon degus]) HSP 1 Score: 79.7221 bits (195), Expect = 6.008e-16 Identity = 46/107 (42.99%), Postives = 66/107 (61.68%), Query Frame = 0 Query: 1 MPSEGETKLFVHGVRDTCPRSVLEDEFSKIGPVTDVYITE-------KGYAFVTMTNSEDADDAARKLNGTTVDGQELKVEIAHGRSRRGSRGGGYRGRFGGNDRGR 100 M SE E KLFV G+ LED FS GP+++V + + +G+ F+T TN E A DA R +NG ++DG++++V+ A G+S RG+RGG G FG + RGR Sbjct: 1 MSSE-EGKLFVGGLNFNTDEQALEDHFSSFGPISEVVVVKDRETQRSRGFGFITFTNPEHASDAMRAMNGESLDGRQIRVDHA-GKSARGTRGG---GAFGAHGRGR 102
BLAST of EMLSAG00000007347 vs. nr
Match: gi|731270970|ref|XP_010604679.1| (PREDICTED: RNA-binding protein 3 isoform X2 [Fukomys damarensis]) HSP 1 Score: 78.9518 bits (193), Expect = 8.811e-16 Identity = 46/107 (42.99%), Postives = 66/107 (61.68%), Query Frame = 0 Query: 1 MPSEGETKLFVHGVRDTCPRSVLEDEFSKIGPVTDVYITE-------KGYAFVTMTNSEDADDAARKLNGTTVDGQELKVEIAHGRSRRGSRGGGYRGRFGGNDRGR 100 M SE E KLFV G+ LED FS GP+++V + + +G+ F+T TN E A DA R +NG ++DG++++V+ A G+S RG+RGG G FG + RGR Sbjct: 1 MSSE-EGKLFVGGLNFNTDEQALEDHFSSFGPISEVVVVKDRETQRSRGFGFITFTNPEHASDAMRAMNGESLDGRQIRVDHA-GKSARGTRGG---GAFGAHGRGR 102
BLAST of EMLSAG00000007347 vs. nr
Match: gi|533197349|ref|XP_005411322.1| (PREDICTED: RNA-binding protein 3 [Chinchilla lanigera] >gi|533197351|ref|XP_005411323.1| PREDICTED: RNA-binding protein 3 [Chinchilla lanigera] >gi|533197353|ref|XP_005411324.1| PREDICTED: RNA-binding protein 3 [Chinchilla lanigera] >gi|731270968|ref|XP_010604678.1| PREDICTED: RNA-binding protein 3 isoform X1 [Fukomys damarensis] >gi|1104936361|ref|XP_019060406.1| PREDICTED: RNA-binding protein 3 isoform X1 [Fukomys damarensis] >gi|676266821|gb|KFO22671.1| Putative RNA-binding protein 3 [Fukomys damarensis]) HSP 1 Score: 78.9518 bits (193), Expect = 9.213e-16 Identity = 46/107 (42.99%), Postives = 66/107 (61.68%), Query Frame = 0 Query: 1 MPSEGETKLFVHGVRDTCPRSVLEDEFSKIGPVTDVYITE-------KGYAFVTMTNSEDADDAARKLNGTTVDGQELKVEIAHGRSRRGSRGGGYRGRFGGNDRGR 100 M SE E KLFV G+ LED FS GP+++V + + +G+ F+T TN E A DA R +NG ++DG++++V+ A G+S RG+RGG G FG + RGR Sbjct: 1 MSSE-EGKLFVGGLNFNTDEQALEDHFSSFGPISEVVVVKDRETQRSRGFGFITFTNPEHASDAMRAMNGESLDGRQIRVDHA-GKSARGTRGG---GAFGAHGRGR 102
BLAST of EMLSAG00000007347 vs. nr
Match: gi|350538645|ref|NP_001233728.1| (RNA-binding protein 3 [Cricetulus griseus] >gi|524970642|ref|XP_005085188.1| PREDICTED: RNA-binding protein 3 isoform X1 [Mesocricetus auratus] >gi|625204784|ref|XP_007643790.1| PREDICTED: RNA-binding protein 3 isoform X1 [Cricetulus griseus] >gi|1032884664|ref|XP_016832445.1| PREDICTED: RNA-binding protein 3 isoform X1 [Cricetulus griseus] >gi|189170130|gb|ACD80090.1| RNA-binding motif 3 [Cricetulus griseus] >gi|537120012|gb|ERE63734.1| RNA-binding motif 3 [Cricetulus griseus] >gi|1040286592|gb|OBS81148.1| hypothetical protein A6R68_20670 [Neotoma lepida]) HSP 1 Score: 78.5666 bits (192), Expect = 1.267e-15 Identity = 46/107 (42.99%), Postives = 65/107 (60.75%), Query Frame = 0 Query: 1 MPSEGETKLFVHGVRDTCPRSVLEDEFSKIGPVTDVYITE-------KGYAFVTMTNSEDADDAARKLNGTTVDGQELKVEIAHGRSRRGSRGGGYRGRFGGNDRGR 100 M SE E KLFV G+ LED FS GP+++V + + +G+ F+T TN E A DA R +NG ++DG++++V+ A G+S RGSRGG FG + RGR Sbjct: 1 MSSE-EGKLFVGGLNFNTDEQALEDHFSSFGPISEVVVVKDRETQRSRGFGFITFTNPEHASDAMRAMNGESLDGRQIRVDHA-GKSARGSRGGA----FGAHGRGR 101
BLAST of EMLSAG00000007347 vs. nr
Match: gi|589965191|ref|XP_006995130.1| (PREDICTED: RNA-binding protein 3 isoform X1 [Peromyscus maniculatus bairdii] >gi|1008797649|ref|XP_015844094.1| PREDICTED: RNA-binding protein 3 isoform X1 [Peromyscus maniculatus bairdii]) HSP 1 Score: 78.5666 bits (192), Expect = 1.267e-15 Identity = 46/107 (42.99%), Postives = 65/107 (60.75%), Query Frame = 0 Query: 1 MPSEGETKLFVHGVRDTCPRSVLEDEFSKIGPVTDVYITE-------KGYAFVTMTNSEDADDAARKLNGTTVDGQELKVEIAHGRSRRGSRGGGYRGRFGGNDRGR 100 M SE E KLFV G+ LED FS GP+++V + + +G+ F+T TN E A DA R +NG ++DG++++V+ A G+S RGSRGG FG + RGR Sbjct: 1 MSSE-EGKLFVGGLNFNTDEQALEDHFSSFGPISEVVVVKDRETQRSRGFGFITFTNPEHASDAMRAMNGESLDGRQIRVDHA-GKSARGSRGGA----FGAHGRGR 101
BLAST of EMLSAG00000007347 vs. nr
Match: gi|625204786|ref|XP_007643792.1| (PREDICTED: RNA-binding protein 3 isoform X2 [Cricetulus griseus] >gi|880960146|ref|XP_012979967.1| PREDICTED: RNA-binding protein 3 isoform X2 [Mesocricetus auratus] >gi|1032884667|ref|XP_016832446.1| PREDICTED: RNA-binding protein 3 isoform X2 [Cricetulus griseus] >gi|537120011|gb|ERE63733.1| RNA-binding motif 3 [Cricetulus griseus]) HSP 1 Score: 78.5666 bits (192), Expect = 1.278e-15 Identity = 46/107 (42.99%), Postives = 65/107 (60.75%), Query Frame = 0 Query: 1 MPSEGETKLFVHGVRDTCPRSVLEDEFSKIGPVTDVYITE-------KGYAFVTMTNSEDADDAARKLNGTTVDGQELKVEIAHGRSRRGSRGGGYRGRFGGNDRGR 100 M SE E KLFV G+ LED FS GP+++V + + +G+ F+T TN E A DA R +NG ++DG++++V+ A G+S RGSRGG FG + RGR Sbjct: 1 MSSE-EGKLFVGGLNFNTDEQALEDHFSSFGPISEVVVVKDRETQRSRGFGFITFTNPEHASDAMRAMNGESLDGRQIRVDHA-GKSARGSRGGA----FGAHGRGR 101
BLAST of EMLSAG00000007347 vs. nr
Match: gi|1012186544|ref|XP_016008839.1| (PREDICTED: RNA-binding protein 3 isoform X2 [Rousettus aegyptiacus] >gi|1012186548|ref|XP_016008840.1| PREDICTED: RNA-binding protein 3 isoform X2 [Rousettus aegyptiacus]) HSP 1 Score: 78.5666 bits (192), Expect = 1.392e-15 Identity = 46/107 (42.99%), Postives = 65/107 (60.75%), Query Frame = 0 Query: 1 MPSEGETKLFVHGVRDTCPRSVLEDEFSKIGPVTDVYITE-------KGYAFVTMTNSEDADDAARKLNGTTVDGQELKVEIAHGRSRRGSRGGGYRGRFGGNDRGR 100 M SE E KLFV G+ LED FS GP+++V + + +G+ F+T TN E A DA R +NG ++DG++++V+ A G+S RGSRGG FG + RGR Sbjct: 1 MSSE-EGKLFVGGLNFNTDEQALEDHFSSFGPISEVVVVKDRETQRSRGFGFITFTNPEHASDAMRAMNGESLDGRQIRVDHA-GKSARGSRGGA----FGAHGRGR 101
BLAST of EMLSAG00000007347 vs. nr
Match: gi|1012186537|ref|XP_016008837.1| (PREDICTED: RNA-binding protein 3 isoform X1 [Rousettus aegyptiacus] >gi|1012186541|ref|XP_016008838.1| PREDICTED: RNA-binding protein 3 isoform X1 [Rousettus aegyptiacus]) HSP 1 Score: 78.5666 bits (192), Expect = 1.410e-15 Identity = 46/107 (42.99%), Postives = 65/107 (60.75%), Query Frame = 0 Query: 1 MPSEGETKLFVHGVRDTCPRSVLEDEFSKIGPVTDVYITE-------KGYAFVTMTNSEDADDAARKLNGTTVDGQELKVEIAHGRSRRGSRGGGYRGRFGGNDRGR 100 M SE E KLFV G+ LED FS GP+++V + + +G+ F+T TN E A DA R +NG ++DG++++V+ A G+S RGSRGG FG + RGR Sbjct: 1 MSSE-EGKLFVGGLNFNTDEQALEDHFSSFGPISEVVVVKDRETQRSRGFGFITFTNPEHASDAMRAMNGESLDGRQIRVDHA-GKSARGSRGGA----FGAHGRGR 101
BLAST of EMLSAG00000007347 vs. Tigriopus kingsejongenis genes
Match: maker-scaffold2012_size22666-snap-gene-0.17 (protein:Tk01854 transcript:maker-scaffold2012_size22666-snap-gene-0.17-mRNA-1 annotation:"splicing arginine serine-rich 7") HSP 1 Score: 57.7658 bits (138), Expect = 1.022e-10 Identity = 35/95 (36.84%), Postives = 53/95 (55.79%), Query Frame = 0 Query: 3 SEGETKLFVHGVRDTCPRSVLEDEFSKIGPVTDVYITEKGYAFVTMTNSEDADDAARKLNGTTVDGQELKVEIAHGRSRRGSRGGGYRGRFGGND 97 +E K+F+ + + +S L EF K G V DVYI+ GYAFVT + A A +++G G++L+VEI+ GR+ RG G +G +D Sbjct: 4 AEPGCKVFIGNIHENVRKSELRSEFEKFGEVLDVYIS-NGYAFVTYGEASAASSAISEMDGIMYMGEKLRVEISRGRAHSDKRGMGRSSDYGRSD 97 The following BLAST results are available for this feature:
BLAST of EMLSAG00000007347 vs. GO
Analysis Date: 2014-04-02 (Blast vs. GO) Total hits: 25
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BLAST of EMLSAG00000007347 vs. C. finmarchicus
Analysis Date: 2014-05-09 (TblastN vs C. finmarchicus TSA) Total hits: 25
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BLAST of EMLSAG00000007347 vs. L. salmonis peptides
Analysis Date: 2014-05-10 (Blastp vs. self) Total hits: 8
BLAST of EMLSAG00000007347 vs. SwissProt
Analysis Date: 2017-02-10 (Blastp vs. SwissProt) Total hits: 25
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BLAST of EMLSAG00000007347 vs. Select Arthropod Genomes
Analysis Date: 2017-02-20 (Blastp vs. Selected Arthropods) Total hits: 25
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BLAST of EMLSAG00000007347 vs. nr
Analysis Date: 2017-02-20 (Blastp vs. NR (2/2017)) Total hits: 25
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BLAST of EMLSAG00000007347 vs. Tigriopus kingsejongenis genes
Analysis Date: 2018-04-18 (Blastp vs. Tigriopus kingsejongensis proteins) Total hits: 1
Alignments
The following features are aligned
Analyses
This gene is derived from or has results from the following analyses
Properties
Cross References
External references for this gene
Relationships
The following mRNA feature(s) are a part of this gene:
Sequences
The following sequences are available for this feature:
gene from alignment at LSalAtl2s4162:3600..4079+ Legend: mRNA Hold the cursor over a type above to highlight its positions in the sequence below.>EMLSAG00000007347-690113 ID=EMLSAG00000007347-690113|Name=EMLSAG00000007347|organism=Lepeophtheirus salmonis|type=gene|length=480bp|location=Sequence derived from alignment at LSalAtl2s4162:3600..4079+ (Lepeophtheirus salmonis)back to top Add to Basket
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