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Associated RNAi Experiments
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| LSalAtl2s132 | supercontig | LSalAtl2s132:616435..622808 + |
Analyses
This mRNA is derived from or has results from the following analyses
| Analysis Name | Date Performed |
|---|
| ensembl | 2013-09-26 .965016 |
Properties
| Property Name | Value |
|---|
| Biotype | protein_coding |
| Logic name | ensemblgenomes |
| Evidence | experimental |
Cross References
External references for this mRNA
Relationships
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following exon feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of EMLSAP00000001919 >EMLSAP00000001919 ID=EMLSAP00000001919|Name=EMLSAP00000001919|organism=Lepeophtheirus salmonis|type=polypeptide|length=442bp
MDPTPPTPNHLLNPGYMPQSPVDLKPDASLLLTTLSNPQSTPPSSAYPVG
ESMYGSQAPHPGVHGHARSTQSPPNNTYPPNHPLSGSKHFCSICGDRASG
KHYGVYSCEGCKGFFKRTVRKELTYACRENRDCVIDKRQRNRCQYCRYMK
CLDTGMKREAVQEERHRGSNGPNHNNNNNNNNNNSRNSEEVESSTSGGGG
DMPIERIIEAEDVGEMKQDTSEFLLLDNNSSMSGGGSIGDMEIQRFGLAK
KRIIHQLIEWAKLVPHFSELKVEDQVTLIRGGWNELLVAGLAFXSIKLND
GILLGNGTIVTRENAHEAGVGHIFDRVLVELIAKMKEMQMDKAELGCLRA
IILFNPDAKGLSDVTKVENLREKVYATLEEYTRSVHENEPSRFAKLLLRL
PALRSIGLKCLEHLFFYKLVGDYLNDGNPLEKFIQSLLEECC back to topmRNA from alignment at LSalAtl2s132:616435..622808+ Legend: exonpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below. >EMLSAT00000001919-697766 ID=EMLSAT00000001919-697766|Name=EMLSAT00000001919|organism=Lepeophtheirus salmonis|type=mRNA|length=6374bp|location=Sequence derived from alignment at LSalAtl2s132:616435..622808+ (Lepeophtheirus salmonis)
GAAAAAAGAAGAGAGGATGAGGAGATGAAAGAAGAAAAATAAATAAAAAA
GGAAGAAAATAGCTAAGAAAAAAAGAAAAGGAGGAAAAGAAGGAAGAGAT
CTGCTGCTATCTGTGGTGAGGCAGCTGAGGAAGAAGTGTGTTAGCAGCAG
CTTCTGCRTGCTTACTGGGAGTAGTGGTGATTACTGATTAGATGGACGTG
GTGTGCTCGTGAGTAGTAGAATACTGAATAGGAGTAGTGTGTGCGTGCTC
TTTTCTCAGGATAATAAAATCGTAGCTTGCAGTTTTTTGAAGCCTCAACT
CCTTGTTGTTCCTGCTTTCAGTTCTTCATGACGAATACTTGGGAGTGTAT
CCGAAGCCGTTAGCCCGTTTGGAATCCAAGAAGTTGAGTTGGCGGAATGG
ATCCCACCCCGCCAACCCCCAACCATCTATTGAATCCCGGGTATATGCCA
CAATCCCCCGTGGATCTGAAACCGGATGCTTCCCTCCTACTCACAACACT
CTCTAACCCTCAGTCCACTCCCCCCTCCTCTGCCTATCCCGTGGGTGAGT
CTATGTACGGATCGCAGGCTCCTCACCCTGGAGTGCACGGACATGCTCGA
AGCACGCAGTCTCCGCCAAATAATACATACCCTCCAAACCACCCCTTGTC
AGGCTCCAAACACTTTTGTTCCATATGCGGGGATCGCGCCTCTGGGAAGC
ACTATGGGGTCTACTCCTGCGAGGGCTGCAAGGGCTTCTTCAAGCGAACG
GTGCGCAAGGAGCTGACGTATGCATGCAGAGAAAATCGGGATTGTGTGAT
TGATAAGCGACAGAGGAATCGCTGTCAGTACTGTCGCTATATGAAATGTC
TCGATACGGGAATGAAGAGAGAAGCCGTCCAGGAAGAACGACATCGAGGC
TCTAATGGTCCTAATCACAACAACAACAACAATAATAATAATAATAACTC
ACGCAATAGTGAGGAAGTGGAGTCCTCTACAAGCGGAGGGGGCGGGGATA
TGCCCATCGAGAGGATCATTGAGGCAGAAGATGTGGGGGAAATGAAACAA
GATACGAGTGAGTTCCTTCTCTTGGACAACAATAGCAGCATGAGTGGAGG
GGGTTCTATTGGGGATATGGAAATACAAAGGTTTGGATTGGCCAAGAAAA
GAATTATTCACCAACTCATTGAATGGGCTAAACTTGTACCTCACTTCTCA
GAGCTTAAAGTTGAAGATCAGGTTCGTCTCTCTTTCTCCCTCTCCTAACT
TTGATTCTCATCTTCTTTATATTATATATCATGGATGTTTAGGTAACACT
TATTCGTGGGGGTTGGAACGAGTTGCTAGTTGCGGGMTTAGCTTTTRGCT
CGATTAAATTAAATGATGGTATTCTTTTGGGAAACGGTACTATTGTTACT
CGGGAAAATGCGCATGAAGCGGGTGTTGGACATATATTCGATCGTGTCCT
AGTTGAACTCATCGCCAAAATGAAGGAAATGCAAATGGTTTGTATAAAAT
TTTCTTTTTTCTATGTATGGCGGGGACTAACTCAGTCATCATGACAAATT
TACTTTTGATTTTCTAGGACAAAGCGGAATTGGGATGTCTACGAGCCATC
ATACTCTTCAATCCTGATGCTAAAGGACTCTCAGATGTTACTAAAGTTGA
AAATTTAAGAGAAAAGGTATATGCGACTCTCGAAGAATATACCCGTTCTG
TTCATGAGAATGAGCCAAGTCGATTTGCTAAACTTCTTTTGCGGTTACCT
GCTCTAAGATCTATTGGACTAAAATGCTTAGAACATCTATTTTTTTACAA
ATTGGTGGGTGACTATTTAAATGATGGGAATCCATTAGAAAAGTTTATTC
AATCTTTACTGGAAGAGTGCTGCTGAAAAGTCATGTTCATGAATATGCTT
CTATAGTGAGTCAGAGGAAGAAATGTTTCTATAAACTTTATGCAAAAAAA
AAAAAAAATTTAAAAAAATACACACGTACATATATTGTTGTTTTGGTCAT
CAAGCCACACATATTTTGACGGTGTAGCTGTTTCAATAGCTCCTTACATC
AATTGTCGAATGATTAAATGTGGATTGCTTCATCATATGAAGAGGGGATT
TGTATGAGGATAGCTGTCTCATGTGTAACTAGTTGCGATGCTTGTTTGGT
TAAAGACAATTGAGCTACTTAAACGAGTAGTTGTTCCTTTGGTTACTTAA
TCTCTATTGAAGGATCTTAAAATAAGATGCATGAGATTAATAGTGATGAC
CTAATTAAAGTTCAAATAATAATTATTATTAAGATATTATGTAGCAATTG
GCTGTATTATAATCAATTATGAAGTTCACAGTTTGTCCATTTTTTTAAAG
AACAATCTCCATCTATTTTGTGAGCTTTAATATGGTNGACCTAATTAAAG
TTCAAATAATAATTATTATTAAGATATTATGTAGCAATTGGCTGTATTAT
AATCAATTATGAAGTTCACAGTTTGTCCATTTTTTTAAAGTAACAATCTC
CATCTATTTTGTGAGCTTTAATATGGTATTTCTCTCCCAACAAGAAGCTT
CTATTTTGGTGTACTTATATAATATATGTAATCATATTTTTTTAATTATG
AAAATAGTATTCAGATCAATCCTTGTTAAATTTATTTTAAATTTGATGGT
TCAAGCTTTTTAAAATTTTTTTAAACAATACTTGCAGTCAATCTGTGTTC
CATTCAATGTGTTCTTTAAATTTATCCGAATAATTGGTTCTCCCCCCCCC
CCCCTTTCTTAATAGTTTTATCGCAATGGATCTGTACTTCTTTTCTTTCT
GGAAATCGAATAATTTTATCTCAACGATGATTTTTTTGTAAGATATCCAT
TATATTATGATCAAAAATGAAATACTCTTGATTGGCTATACAATTTGTTA
TTTTCTTAATATTCTATATATTTTGTTTTAAGGCCCAAAAAATTTGATAT
AACACTAAATTTTCTTCCCTATACTATTTTTATGAAATTGTTACAAAACT
CTATTTCTTCCGCTTTAAATAATATTATATCATTMTTCTTGTTTATACTT
TAACTCAGTTATGGTTNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNAAAAAGAGTATTATTGCTTCAAATCCATAAAATAATA
ATTATATTATAAATTTGGAAACACAATTTTTGTGTTTCTATAATCATRTT
YRTATAWYTTCTATATATGATGCTAATAAATTTTTATGTAATTAATTCAA
GGCTGCTATGCTAATTATTCGCAATACGGCTAAAAACCATACTTGTCTCA
ACTTAAAGTATTGTAACCAATCAGTGATGACTTACTGTATTAAAAGAAAT
GCCGGAATCTGGTCCCATTATTGAAATATATCACGCTGTGTACATGATGC
AATTTGTACGGATCATAACGTAATTAATTACAACAACTTATATATATGAC
TATTTATTAAGTATGCTTATTTACGAGTGATATTTGGGACAGTGGACGCT
TGAGTATTGTAATATAACTATAGGATAGGCACTTTAATTATTCACTTTTA
TCAGAAAAGTCGAATATCACCCTATTAATTTATGAACAATCTAATGGAGT
TTCAACCATTGAAATATATTTATCAGAAGTACCTAGTGTTAATTCATAAT
TTATTAATAGCTTAATCTTATTTTTTTTAGTTGCAATGTTAAAGAATAAA
AGATAAATGTCAAGAGTTTACCTACATACATGGAGATCGGACCGGTTCAA
CAGTCGTTGTAACACGCCTTTTACATTAAAAAAAAAATGACGTACATATT
TTATGTTTTAAGTAACAGCCAACAATTGCATAACTTTTTACTTACTAAAT
AGAATATTGATACTCAGACTGTGATACATCATTGTCATTGCTGAAGTACA
TCGAGGAAATTGTAGACGAAAGAAAAAGAATAATCAAAATGTCCCTCTTA
TCACCACTTCGTACCTTGGCTCAACGTAATTTACAAAAGGGAATCTTAGT
CAGGAGTTATCATGACAAGGTATGTWTCGTTGTGTAYCCGCCGTATTAAT
CATGTAATATAAATATTAATGGGTTTTTATCCAGGTGATTGATCATTACG
AGAATCCTCGAAATGTTGGGAAATTAAACGCAAAGAACAAAAATGTGGGC
ACTGGTTTAGTGGGTGCTCCCGCCTGCGGGGRCGKCATGAAGTTACAAAT
CGAAGTGGACGATGATGGAAAGATCGTTGATGCCAAATTCAAGACATTTG
GTTGCGGCGCGGCCATCGCATCTAGCTCTTTGGCTACTGAATGGATTAAA
GGCAAACAAGTAAATATATTTACCATTAATCATTTTTGGATATTTTAATT
GTTTGGTTATATATAATAATAGATAAATGAGGCTTCATCCATCAAGAACT
CGGATATTGCAAAGGAACTGTCTTTGCCACCCGTCAAATTACATTGTTCA
AGTAGGTTATTAATTACGTATTTCTAACTATATTTCTTATTACAACTCCT
ATTACGCATTATTCAAAAAGAGGCCTCATTTTATTTTATTAGAATCACTT
GCATCAAAATAGGCTCTATCATTGCGTCCAAGGCTCTGATTGATAGATGT
TGGACCCAGAGGCGTCGCTAGCTCCTTTTTAGGGGCTCAATCCCCCCAAA
TTTCTGAAGTAGACCCCCCTTCCCTAATTTTTTAAATCACATGTTAGATT
GGGGAAGGGGGGGGGGTGAAGTAATTTCGTATTTTTTGCTTTACTTCAAT
GCTTTATAAAAGGTATTGCAATCATCAAATTTAAGCCAAGTATGCCCCGT
TCTGTTGAGATAATTTGTTGTGAGCGATAGTTCAACTTCATAATGCCCTT
TTCGTAGAAGCCCTTGTCCCTATTGAAAAAAAACCTCGGAGAACCAGTTT
TCACAGGCCTCTATTGAGGCTAAATTTGTACCCACAAGCGCATTGGTCAG
GAACAGGTAGTAGTCACTTAGTGCCAGGTCCGGACTGTAGGGATGGATGC
ATAAGAATTTCCCATCCAAGCTCCCGGAGCTTCTGGCACGTCATCAAAGA
TGACTGAGGCCTGGGGTTGTCTTGATAAAACACAATTCCTATCCTATTCM
CCAATTCTTTTTGTATCCAGCCGTTTGCAAATGGTTATCACTCACACCTT
TACAATGCCTTATCGTATGATCCGATGAGAACAATAATGAATAAGATATA
CTTAGTTTAAAGAAGAATAGAACGAGAAATAAGAAATTACTTTTTCCCTG
ACCTATTATATGCGAGTAAAATATACGTACTTATATAAATATTGATATTA
CGGTATTGATAATTTTAGGGCTAAGCCCCTCAAAAGATGAAAGATAGCAA
CACCCCTGCAGTTGGACCTATTAATAGGCATTGAGTATCACGTGTAGTTA
TAACATAAGTCATAACTAACAGATTTATTGATGAGTGTGCCGCAGAAAAT
GTGTGTTGGGGGGGGGGGAGGGAGATGTGAATTTATTTTATTGTATTAGA
CCAGATTTCATCAATAAAAATGTACTACTCATCAAAAAAGGTTAAAAAAA
CATGGATATAAATTAATATTCATTTAGAATTGGATTTCCCGAAGACCGGT
TTTAGAGGGGACATTTGCTCAATTGGAGATGCCGTGCGGTAGTTAAAAAA
TAGAACTATATAATGTACTGAGAGGAAAATGATTTTATTTCCTCTGCTTT
AGAAAGGAAAGAAAGATAAAGGCCTCTCACGTTTATCTTTGCTCCAGATC
CAGTTCACGCTAAAACCGGCCCTTCCCGTGGGTTGTGTAGAAAATTATTA
CAAGATTTTTTTTTAGAAAGACATAATAAGTCATCAATGGAAGAGGGGGT
TTGAATTGGGCTTAAACTTTTAAAAATGTATTCTCTACATATTTATCTAA
TAATATTTATTTTCACATTTAGTGTTGGCTGAAGATGCAATCCAAGCGGC
GTTGAAGGACTACAAACAGAAGAACACTGCATGAATTCATGTTAATTAAA
GAAATAGTTTTTGAGAAGATATTTTTGTCAACTTTTCATTTTTGTAGCTG
ATTGAATTTTGCCACAATTATCGGACGAAAGAATCGTTGTTGACTCTTAT
TCTATCACCAGTTATTTTTTACAAATTTTCCTTTAATTAGAAAGTATTTA
AAATTAATAAATGCGTTGAAATTTATTTTGAATCATTATTGGCTTAAGAA
ACAGATGTATGTATAAACTAAATACAAAATACACTCTCATCTAATTTGTA
ATAATAATACTTACAGAAGATATTGAAACCTACCTTTTATTAAAAAAAAA
ATATTAATTAATTAAAAGCTTTAA back to top
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