EMLSAT00000007670, EMLSAT00000007670-703517 (mRNA) Lepeophtheirus salmonis

Overview
NameEMLSAT00000007670
Unique NameEMLSAT00000007670-703517
TypemRNA
OrganismLepeophtheirus salmonis (salmon louse)
Associated RNAi Experiments
Table of all RNA interference experiments conducted using this feature, grouped by Phenotype CV: -Missing-
Gallery Image Title Gene or target symbol Sex/Stage Phenotype Datesort descending Publication
Mucin-like spermatophore wall protein 1 (AG F269) MLSWP1 male
  1. adult male
females missing eggstrings/producing no off-spring
-Missing-
16.08.2016 - 15:03
23.09.2016 - 15:04
A novel gene-family involved in spermatophore... more
Table of all RNA interference experiments conducted using this feature, grouped by Phenotype CV: female reproduction, no eggstrings, no spermatophore
Gallery Image Title Gene or target symbol Sex/Stage Phenotype Datesort descending Publication
Mucin-like spermatophore wall protein 1 (AJ F269) MLSWP1 male
  1. Adult
-Missing-
female reproduction, no eggstrings, no spermatophore
21.03.2017 - 09:08
25.04.2017 - 09:08
A novel gene-family involved in spermatophore... more
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
LSalAtl2s4476supercontigLSalAtl2s4476:1751..4717 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
ensembl2013-09-26 .965016
Properties
Property NameValue
Logic nameensemblgenomes
Biotypeprotein_coding
EvidenceIEA
Cross References
External references for this mRNA
DatabaseAccession
Ensembl Metazoa (transcript)EMLSAT00000007670 (primary cross-reference)
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
EMLSAG00000007670EMLSAG00000007670-690436Lepeophtheirus salmonisgene


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
EMLSAE00000033847EMLSAE00000033847-742775Lepeophtheirus salmonisexon
EMLSAE00000033848EMLSAE00000033848-742776Lepeophtheirus salmonisexon
EMLSAE00000033849EMLSAE00000033849-742777Lepeophtheirus salmonisexon
EMLSAE00000033850EMLSAE00000033850-742778Lepeophtheirus salmonisexon
EMLSAE00000033851EMLSAE00000033851-742779Lepeophtheirus salmonisexon


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
polypeptide-auto768174auto768174Lepeophtheirus salmonispolypeptide
EMLSAP00000007670EMLSAP00000007670Lepeophtheirus salmonispolypeptide


Sequences
The following sequences are available for this feature:

protein sequence of EMLSAP00000007670

>EMLSAP00000007670 ID=EMLSAP00000007670|Name=EMLSAP00000007670|organism=Lepeophtheirus salmonis|type=polypeptide|length=549bp
MRNTGVWTLSIYFLFNILNGIDAGDYGKSSAAPPNPKPAPPNPKPAPPNT
KPAPSKEVEIPPYGDFKDDIDRAGDTSKACRYDEPFWSDCDAFELKRYRV
LHLIHGGRQCEEVKNITKHCTPGEFPPGTTWLISEHRKCIAELTRLKAMI
ADLAKYIEALHGKGKILFDAYLGLKKHLDELKQTIQSLQTEDQQKKTTIA
NVREEIETWKGKARELQAELDELRTKYHDLQAEHKEGGEKLKECFSDKSR
CLSENDRLKKKIHDEEAENSEIKRRLLEAAKYKEQLKEVKFAIAKFEYKV
EKLQENLEKETNIKKEAKCLITYYGXTNESCWYQTKGQSSEYEYADSMGH
HLVEAHWKYFTIDVANQYDCDRAAQLHYEFLLNRCSPKHYLPVMSVYRPN
GQLKELPTHIYPKPNIPQPGHPYRCWITFLGPHGHCERHMDRYDLYNVDD
GQDERIATNKLNRHGGEPPPLNTGGNKSSSSSSTSKSSASSGSSSSSAMS
SSNKDSHTSESEKSSSSSLKSGSSSSLDKGSSSLSGSISSSSSGASSNE
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mRNA from alignment at LSalAtl2s4476:1751..4717-

Legend: polypeptideexon
Hold the cursor over a type above to highlight its positions in the sequence below.
>EMLSAT00000007670-703517 ID=EMLSAT00000007670-703517|Name=EMLSAT00000007670|organism=Lepeophtheirus salmonis|type=mRNA|length=2967bp|location=Sequence derived from alignment at LSalAtl2s4476:1751..4717- (Lepeophtheirus salmonis)
ATGAGAAACACGGGTGTGTGGACTCTATCGATATATTTCCTGTTCAATAT ACTCAATGGAATAGATGCTGGAGACTACGGGAAATCAAGTGCGGCTCCAC CTAACCCAAAGCCTGCTCCACCAAACCCAAAGCCTGCTCCACCAAACACA AAGCCTGCCCCATCCAAAGAGGTCGAAATTCCACCTTATGGGGATTTTAA AGACGATATTGATCGAGCAGGAGATACGAGCAAAGGTGCATACGTTTATA TTTACTTGAACACTAAAAATGATCTCTTTTGAACGGTAAATTATAGCATG TAGATATGACGAGCCCTTTTGGTCGGATTGTGATGCCTTTGAACTGAAAA GATATCGGGTACTCCATTTGATTCATGGTGGTCGACAGTGTGAAGAGGTT AAAAATATCACAAAGCATTGTACACCCGGCGAATTCCCACCAGGCACGAC TTGGCTGATTTCAGAGCATCGGAAATGCATTGCTGAATTGACCAGACTAA AGGCAATGATTGCTGACCTTGCTAAATATATTGAGGCTCTTCATGGCAAA GGAAAAATTCTCTTTGATGCGTATCTTGGACTCAAAAAGCATTTGGATGA ACTAAAACAGACAATACAGTCTCTTCAAACCGAGGATCAACAGAAAAAGA CGACGATTGCCAACGTAAGGGAAGAAATTGAAACATGGAAAGGTAAAGCA AGGGAACTTCAAGCTGAATTGGATGAACTCAGAACGAAATATCATGACTT GCAAGCTGAGCATAAGGAAGGCGGAGAAAAATTGAAGGAATGTTTTTCTG ACAAATCTAGATGTTTGTCAGAGAATGATAGACTCAAGAAGAAAATACAC GATGAAGAAGCCGAGAACTCAGAAATCAAACGACGTCTTCTTGAAGCCGC AAAGTACAAGGAGCAATTGAAGGAAGTAAAGTTTGCCATTGCCAAATTTG AGTATAAGGTTGAGAAACTCCAAGAAAACCTCGAGAAAGTAAAAGAAAAA CTCTCTGACTGTAGATTGGATTTAATGTTCTTTGAGCATAAAGAGGTAAT GTTTTGATTTATTAGGACTACCAATACAGGCACATAAGTGGCCCGTCAAC ACAAAAGTAAGCTAGAAGGATATTTCTCAAAATTGAGCGTGGATTGCATT TGTATTCGTATAGAAATGATCCTCCATTTCTATGAACAAATAATTATTTT TGCCCCTTTAGGGTGTTTCACAAATGTAAGAGGCTGAAAAGTAGAGAATA CGAAATTGATTGACTTTATTTAAAATGCTATATCGGGGGCAACATAAGTC TCTAAAATTAAACAAGGATTTTAAGCTATAGTTGTTTTTTTGGGGCGGGG GCATATTAGCTCGAACCACAAATTTGAATACAAAGTCTATAATTAACTCA AATAGGTGTATGAGCCATTCTCTTCTTGATTTTTTTCAAGATTCTTTTTA TGTTGATGCACTACATACATAAGTTGGAAAATGATATTAGATATTACTTA ATAGGTGATTGAAGATTCAAAGGATACAAAAGTTGACATGAACATGGAGA TGTGGATTATTCATAATAAATCTAATAGCAAACATGAAGAAACACTCTTC ACCATGCCCACGACAGAAAAACCAAAAGTGATTCAAAAAATATATATTTA TTTTTAAACCCGTATAATTTTTTAAAAACATTTTTTAACGTTGTAGGAAA CGAATATTAAAAAAGAGGCCAAATGCTTGATCACATACTATGGCTAMACC AATGAGTCCTGTTGGTATCAAACTAAAGGACAGTCTTCCGAATATGAATA CGCGGATTCTATGGGCCATCATTTAGTTGAGGCACACTGGAAATACTTTA CAATAGATGTGGCAAATCAATATGACTGTGACCGAGCAGCACAATTACAT TATGAGTTTCTATTGAACCGCTGTTCACCAAAGCATTATCTCCCAGTCAT GAGTGTTTATAGACCAAACGGTCAATTAAAGGAATTACCAACCCACATAT ATCCGAAACCAAATATCCCTCAACCAGGACATCCATATCGATGCTGGATT ACGTTTTTGGGTCCTCATGGTCACTGTGAGAGACATATGGACCGTTACGA CTTATATAACGTAGACGATGGCCAAGATGGTTATATGGGTGCATCTCAAT CAAAGAATACATGTCTGGATCGRGGGGCSTGGTGGACTAAATACTNKRAA AAYCCTGCCATTTCCACATATGTTCCTGAAGGAGTTTCAAGCAATTGGAA AAATGAAGACATTCAACATGACTCCCACGGAGCAAAAATGTTTGAAAATT NCTAGAGCTCATTTTTGGGGAAAAAAAYGATATAATAATAACAGTATAAA GCTCTGTAATTTTGGTGTTGACAAAATGCCACGTCATTTTTAAGCTCCTC CCTATATTCTATAAATTGGTTCCGGTTTGAGTAAAGCCTATATACCCCCC ACCCCAATAATTTTGTTTCAACTCCATTCCTTCCTTCCTTAATTTAGGGC AAAGAGAGAGAAGAGATATTAGAAAGTTTAAGAAAACGACTTGGTATGAC AAGAAAGGATAGCTACAAACAAGTTAAATAGGCATGGAGGAGAACCTCCA CCTCTCAACACAGGCGGCAATAAGTCTTCTTCCTCCTCATCAACATCCAA GTCCTCTGCCTCATCTGGATCCTCCTCCTCCTCCGCTATGTCAAGTTCTA ACAAGGATTCTCATACATCAGAATCAGAAAAATCTTCATCAAGTTCATTG AAATCGGGTTCTAGTTCATCGTTGGATAAAGGTTCAAGTTCACTTTCTGG CTCTATTTCATCAAGCAGTTCTGGAGCATCTAGTAGTGATTCTAAARCAG CCATAAAGTCAAGTTCTTTTGGCTCATTTTCAGGATCTTCTTCCGGAGGC TACTAAGAGTTTAAAAAAAATGTTGATTGAAATGTTTCTATATTTTAAGT TTAATTTAGATGAATAA
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