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Associated RNAi Experiments
Table of all RNA interference experiments conducted using this feature, grouped by Phenotype CV: no visible phenotype
Gallery Image |
Title |
Gene or target symbol |
Sex/Stage |
Phenotype |
Date |
Publication |
|
NAE F3 |
LsIRP1B |
unknown |
no phenotype no visible phenotype |
12.06.2014 - 00:00 20.06.2014 - 00:00 |
Characterisation of iron regulatory protein 1A... more |
Alignments
The following features are aligned
Aligned Feature | Feature Type | Alignment Location |
LSalAtl2s457 | supercontig | LSalAtl2s457:64181..67196 + |
Analyses
This mRNA is derived from or has results from the following analyses
Analysis Name | Date Performed |
ensembl | 2013-09-26 .965016 |
Properties
Property Name | Value |
Logic name | ensemblgenomes |
Biotype | protein_coding |
Evidence | IEA |
Cross References
External references for this mRNA
Relationships
This mRNA is a part of the following gene feature(s):
The following exon feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of EMLSAP00000007801 >EMLSAP00000007801 ID=EMLSAP00000007801|Name=EMLSAP00000007801|organism=Lepeophtheirus salmonis|type=polypeptide|length=915bp
MKEGPSSGTMEDEDLLKDFQVGERSYKYYDVTQIQGYEELPYSLRVLLEC AVRKRSETQGQVWKDVYERILRRVLLQDFTGVPALIDLAAIRESVSKSGG CPDVVDSLCPADLVVDHCVQVDYNQIKQQLSSPPDPSPKTPVLGDDICPF HQKMSYWADALRSNQTSEFERNKERFIFLKWVNSAFKNITVIPPGTGVMH QVNLEYLARVVTCQGGVLFPDSVVGTDTHTTMINGLGVLGWGVGTLDAQA VMFGHPVTLSFPRVVGIRIKGVISDYSTSTDLVLMITKKLRQAGVQGAFV EFFGPSLKELSVADRATISNMCPEYGALVGFFPIDEITIQYLAQSGRDKS HIETVEKYMKTVKMFRSSDENENIRFASIIEIDLSDIIPCVSGPKRTKDK VSINEIAADFKSALHLKEGPKGYGLSQGQGHVAFSVNIDGEYFTVGHGTV LLAAISSCTNTSNPSVMLGAGLLAKKAVECGLSVPKVVKTSLAPGSGVVT SYLQESGVMPYLYMLGFEIVGYGCSTCSYNSGPNLPDSIVQAIKQGNLVC CGLLSGNRNFEGRLDPDIRANYLASPLMVIAYAIAGRIDINLDREPLGFN SHTGEAIFLKNIWPSRQEIQEIERKLVIPGIYRQVYSKVSVGNKHWDSLS VPNSVDKFPWSSDSTYIKCPEYIKEIGSNARNWKNMRCLLKLGDNITSDH ISPAGSITRSSPAAEYLSSLGLAPREYNSYGARRGNYHVMVRGTFSNMRL QNHLLNKVGPYTLHLPSEVTTTIFEASERYKNDGVSLFAIGGKNFGRGTS RDWATRGPFLLGVRAILAVSFDPTYRSNLVKTGILPLQITSISYESLKGT ECLSIDIRDNITPKCLIDVVVGKAERSFKAVVRVDNDYETDVFHAGGVIA QIVSKTKDKTTCETA back to topmRNA from alignment at LSalAtl2s457:64181..67196+ Legend: polypeptideexon Hold the cursor over a type above to highlight its positions in the sequence below. >EMLSAT00000007801-703648 ID=EMLSAT00000007801-703648|Name=EMLSAT00000007801|organism=Lepeophtheirus salmonis|type=mRNA|length=3016bp|location=Sequence derived from alignment at LSalAtl2s457:64181..67196+ (Lepeophtheirus salmonis) ATGAAAGAAGGGCCCTCATCAGGGACTATGGAAGATGAAGACCTTCTCAA
GGATTTCCAAGTTGGGGAAAGAAGCTACAAATATTACGACGTAACCCAAA
TCCAGGGCTATGAGGAACTCCCTTACTCCTTGCGTGTTCTCCTGGAGTGT
GCCGTTCGAAAGCGTTCGGAAACGCAAGGACAAGTCTGGAAGGATGTTTA
TGAACGGATTTTGAGTGTGTTGAGCGGATGTGAAGAGGACTNCTGAGGAA
GATGACGATATCCTATTTCATCCAGGGCGAGTTCTTCTTCAGGATTTCAC
AGGAGTTCCAGCATTGATCGATTTAGCAGCGATCCGTGAATCTGTATCCA
AGTCCGGTGGTTGTCCGGATGTGGTGGACAGTCTTTGTCCAGCAGATCTG
GTTGTAGATCACTGTGTTCAAGTGGACTACAACCAAATCAAGCAGCAACT
GTCAAGYCCGCCTGATCCTTCTCCCAAGACCCCGGTTCTCGGGGGTTCGA
TGCAGCCTTGTCCCACCGTGATCGTTCACTCCACTTTCCCTCCCCCTTTC
CTGGCCTATCCTCCACCTCCGCCCATTTATACGCTCCCTGCATTCTACCC
CATTTCAAGCTATCAAYCCAAGGTAGTGGCCCCTTCYCCGGCATCCAATA
CTTCAAATCGCTCTGTTCCTCCAATGGACAACCCTGGACTTCCAATTCAA
GATGATATTTGCCCATTTCATCAAAAAATGTCTTATTGGGCCGATGCTCT
GCGTTCAAATCAGACATCCGAATTTGAGCGCAATAAGGAACGTTTCATCT
TTCTAAAATGGGTTAATTCTGCCTTCAAAAATATCACCGTGATTCCTCCT
GGAACAGGAGTGATGCATCAAGTGAATTTAGAATATCTTGCCAGAGTGGT
GACGTGTCAAGGAGGTGTTCTCTTTCCAGACTCTGTTGTGGGGACAGACA
CTCATACTACAATGATTAATGGGCTAGGTGTACTTGGATGGGGTGTTGGG
ACTCTTGATGCACAAGCTGTTATGTTTGGACATCCTGTTACTTTGAGTTT
TCCTCGTGTAGTTGGTATCCGTATAAAAGGTGTTATATCTGACTACTCGA
CATCCACTGACTTAGTGTTAATGATAACGAAGAAGCTACGTCAAGCAGGA
GTACAAGGAGCGTTTGTTGAATTCTTTGGTCCCAGCCTGAAGGAATTGAG
TGTTGCTGATCGAGCTACGATTTCTAATATGTGCCCTGAGTATGGAGCAT
TGGTTGGCTTTTTTCCAATTGATGAAATTACAATTCAATATCTTGCACAA
TCTGGGAGGGATAAATCTCATATAGAAACTGTGGAAAAGTACATGAAAAC
TGTCAAAATGTTTCGCTCCTCGGATGAAAATGAAAACATCAGATTTGCTT
CTATTATTGAAATTGATTTGTCTGATATTATTCCTTGTGTATCTGGTCCA
AAAAGGACCAAAGACAAAGTATCAATCAATGAAATAGCAGCGGATTTTAA
GTCTGCATTACACTTAAAAGAGGGACCTAAAGGATATGGGTTATCACAAG
GACAAGGTCATGTTGCTTTTTCTGTGAACATTGATGGAGAATATTTCACA
GTAGGCCATGGAACTGTTTTACTAGCAGCTATTTCATCATGTACAAATAC
AAGCAATCCTTCTGTAATGCTTGGAGCCGGTCTTTTAGCTAAAAAGGCCG
TAGAATGTGGTTTGAGCGTGCCAAAAGTAGTAAAGACAAGTTTAGCACCT
GGAAGTGGGGTCGTAACGTCGTATTTACAAGAAAGTGGTGTAATGCCTTA
TCTTTACATGTTGGGATTCGAAATCGTGGGCTATGGATGCTCTACATGTT
CTTATAATAGTGGGCCAAATCTTCCTGATTCAATTGTTCAAGCTATCAAG
CAAGGAAATTTGGTATGTTGTGGCCTCTTGTCAGGAAATAGAAATTTCGA
AGGTCGATTAGATCCCGATATTAGAGCAAATTATTTGGCCTCTCCACTTA
TGGTTATTGCTTATGCTATCGCCGGTCGTATCGATATAAATCTTGATAGA
GAACCATTGGGTTTTAACTCTCACACAGGAGAAGCCATTTTCTTGAAGAA
TATTTGGCCTTCTCGACAAGAAATTCAAGAGATAGAGAGAAAACTAGTTA
TTCCTGGCATATATAGACAAGTTTATTCAAAAGTATCTGTTGGCAATAAA
CACTGGGACTCTTTGTCTGTACCTAATTCTGTTGATAAGTTTCCTTGGTC
AAGTGACTCAACTTACATAAAGTGTCCCGAATATATTAAGGAAATAGGTT
CTAATGCACGTAATTGGAAAAATATGCGTTGTTTGTTAAAATTAGGAGAC
AATATAACATCAGATCACATCAGCCCTGCTGGAAGTATTACTCGTAGTAG
TCCTGCTGCAGAATATTTATCGTCTCTTGGACTTGCTCCGAGGGAATATA
ATTCTTATGGTGCTCGAAGAGGTAATTACCATGTTATGGTTCGTGGAACA
TTTTCTAATATGCGTCTACAGAATCATTTATTGAACAAAGTTGGACCTTA
TACACTGCACTTGCCCTCTGAAGTAACAACCACCATTTTTGAGGCTTCAG
AACGCTATAAAAACGATGGAGTGTCTCTATTTGCTATTGGTGGTAAGAAT
TTTGGAAGAGGAACTTCGAGGGATTGGGCAACTAGAGGTCCATTTTTATT
AGGAGTTCGTGCAATTTTAGCCGTCTCCTTTGATCCAACATATCGCTCGA
ATCTCGTCAAAACTGGAATTCTTCCCCTGCAAATTACAAGTATATCATAT
GAGTCTCTTAAAGGAACTGAATGCCTTAGCATTGATATAAGAGACAATAT
TACACCTAAATGTCTCATCGATGTGGTTGTTGGAAAGGCAGAAAGATCCT
TTAAAGCTGTTGTTCGAGTCGACAATGACTATGAAACAGATGTCTTTCAT
GCAGGGGGTGTAATTGCACAAATTGTCAGCAAAACAAAGGACAAGACGAC
ATGCGAGACAGCTTGA back to top
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