EMLSAT00000011195, EMLSAT00000011195-707042 (mRNA) Lepeophtheirus salmonis

Overview
NameEMLSAT00000011195
Unique NameEMLSAT00000011195-707042
TypemRNA
OrganismLepeophtheirus salmonis (salmon louse)
Associated RNAi Experiments
Table of all RNA interference experiments conducted using this feature, grouped by Phenotype CV: reproduction, female reproduction, no eggstrings
Gallery Image Title Gene or target symbol Sex/Stage Phenotype Datesort descending
AS F384 female
  1. PreAdult2
 -Missing-
reproduction, female reproduction, no eggstrings 		21.08.2018 - 09:08
24.09.2018 - 09:08
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
LSalAtl2s761supercontigLSalAtl2s761:35239..38386 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
ensembl2013-09-26 .965016
Properties
Property NameValue
Logic nameensemblgenomes
Biotypeprotein_coding
EvidenceIEA
Cross References
External references for this mRNA
DatabaseAccession
Ensembl Metazoa (transcript)EMLSAT00000011195 (primary cross-reference)
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
EMLSAG00000011195EMLSAG00000011195-693961Lepeophtheirus salmonisgene


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
EMLSAE00000050019EMLSAE00000050019-758947Lepeophtheirus salmonisexon
EMLSAE00000050020EMLSAE00000050020-758948Lepeophtheirus salmonisexon
EMLSAE00000050021EMLSAE00000050021-758949Lepeophtheirus salmonisexon
EMLSAE00000050022EMLSAE00000050022-758950Lepeophtheirus salmonisexon
EMLSAE00000050023EMLSAE00000050023-758951Lepeophtheirus salmonisexon
EMLSAE00000050024EMLSAE00000050024-758952Lepeophtheirus salmonisexon
EMLSAE00000050025EMLSAE00000050025-758953Lepeophtheirus salmonisexon


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
polypeptide-auto770116auto770116Lepeophtheirus salmonispolypeptide
EMLSAP00000011195EMLSAP00000011195Lepeophtheirus salmonispolypeptide


Sequences
The following sequences are available for this feature:

protein sequence of EMLSAP00000011195

>EMLSAP00000011195 ID=EMLSAP00000011195|Name=EMLSAP00000011195|organism=Lepeophtheirus salmonis|type=polypeptide|length=330bp
MGICVCQEGWTGAECDECIKKPGCVNGNCKDTPFECLCEEGWTGAECDEX
IKRPGCVNGEXKDMPFGCICMDGWTGFNCDECIKKPGXVNGECNGIPFGC
ECQRGYEGELCNNPICREGCHPQFGTCNAPGQCNCIDGWTGVNCDECIKK
PGCVNGECKGIAFGCDCNDGWAGEFCEKCIKPWICTPKISYGKWSKWNQW
SDCYSKNCHSVGKKWRRRECLFNKTYHKRKPQYGKHYDTQSHHGVYPHKV
KYCHGASIEKQPCSPQYCHKKGHKFHYYWSEWKPCTAQCKGHIGVRHRVK
ICPKQICDEKETQKCVGTIYKHSINGTLCY
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mRNA from alignment at LSalAtl2s761:35239..38386+

Legend: exonpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
>EMLSAT00000011195-707042 ID=EMLSAT00000011195-707042|Name=EMLSAT00000011195|organism=Lepeophtheirus salmonis|type=mRNA|length=3148bp|location=Sequence derived from alignment at LSalAtl2s761:35239..38386+ (Lepeophtheirus salmonis)
AAGCCACTGTAGAGTTTAAAAAAATCATCAGTTTGATTTGATACACCCCA
ACTACGAAAATGAGGATAATTTCAATAGTTTTCATCGGATTGGTTTTATT
AGTACAAGGTTACTTCTGCTGGATTACTCCGTTGAGTATCAATAGGGCCT
GTCTGGCGGRGGCACTAAGGGTAAATCATTATTATTTGGTTGTTCAATTT
ACATGCTATTGTGTAGAGATTATACATTTATTCTATAATTTCACCACTAG
CTCACAAATAAATACAAATGCGATTCAAATGGAAATATTATATGCTTGAG
AGGATGGKCGAATCCGATTGAATGGKGTAAAACTCCAATTTGTAATATAA
ATGGAAATTCGTGCCTAAATGGGAAGTGTATTTTACCTAATACATGTGCA
TGCCATGTGGGTTGGGATGGATCCATCTGTGATAAATGTATTCCAAGAGG
AGGATGTCAAAACGGAGATTGTGATAATCCCTTTGAATGCAATTGTTCGG
AAGGTTGGTCCGGATATAATTGTGATAAAGCAGATTGCCAAAATTGCGTG
AATGGAAAATGTACCGAACCGAACCTGTGCATGTAATAAATCATAGCATA
ATTTAATCATTTAATTGTTATAACTAGTAGTATATTAATACATTTTTAGA
TGTAATCCGGGATGGGTTGGAGATAAATGTGACAAATGCGTCAAAAAACC
GGGATGTTTACATGGAAATTGCAACAACAAACCACATGAATGTGAGTGCA
GAGAAGGATGGACAGGAGAACTATGCGATATCCCCATTTGCCTTGAAGGA
TGCCATCCCCAATTTGGAACATGCGAAGTTCCAGGAGAATGTAAATGTGT
TACTGGGTGGACTGGACCATTATGTACGAAAAAAGAGTGTACTGTACAAT
GTCATTTGGATAATAGTGAATGCGATATGGGAATTTGTGTTTGTCAAGAG
GGATGGACAGGAGCTGAATGTGATGAATGCATTAAAAAACCAGGATGCGT
TAATGGCAATTGTAAAGACACACCTTTTGAATGTTTGTGCGAAGAAGTAA
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NTATTTGTTACATTTGATATTCCNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNTACTGGGTGGACTGGGCCTTATGTACG
AAAAAAAGAAGTGTTCTGTCCGATGTCAATTGGATAATAGTGAATGTGAT
ATGGGAATTTGTGTTTGTCAAGAGGGATGGACAGGAGCTGAATGCGATGA
ATGRATTAAAAGGCCAGGATGCGTTAACGGCGAGNGTAAAGACATGCCTT
TTGGATGTATTTGCATGGATGGATGGACTGGATTTAACTGTGATGAATGC
ATTAAAAAACCGGGATGRGTAAATGGRGAGTGTAACGGCATTCCCTTTGG
ATGTGAGTGCCAAAGRGGATATGAAGGAGAACTATGCAATAATCCTATTT
GCCGTGAAGGATGTCATCCTCAATTTGGAACCTGCAATGCTCCAGGACAA
TGTAACTGTATAGATGGATGGACTGGAGTTAACTGTGATGAATGCATTAA
GAAACCGGGATGCGTGAATGGCGAGTGTAAAGGGATTGCTTTTGGATGTG
ATTGCAATGATGGATGGGCAGGAGAATTTTGTGAAAAATGCATAAAACCT
TGGATATGTACTCCTAAAAGTAAAACTTATTTTCTGTTCATCAATACTTA
AATTATTTCACATTTCTATTTGTATTTTCAAATTATAGTTTCTTATGGAA
AGTGGTCAAAATGGAATCAATGGAGTGATTGTTATAGTAAAAACTGTCAT
TCAGTTGGCAAAAAATGGCGTAGAAGGTATACTCTGCTCTTAAATTAAAA
TATAATATATATGTCACAAAATTCCCATCTCCTCTAGGGAATGCTTGTTT
AATAAAACATATCACAAAAGAAAGCCACAATATGGCAAACACTATGATAC
ACAATCTCATCATGGAGTATATCCACATAAAGTCAAATATTGTCATGGAG
CCAGCATTGAAAAACAGCCTTGTTCCCCACAATATTGTCACAAAAAAGGT
AACTTTACTAGGGAAATAATCCCATAACAGCTATTGATGACGATTATACT
CTTTAGGACATAAGTTTCATTATTACTGGTCAGAATGGAAACCATGCACT
GCACAATGCAAAGGACATATAGGTGTTCGGCATAGAGTAAAGATTTGTCC
AAAACAAATATGTGACGAAAAAGAAACACAGAAATGTGTGGGAACCATTT
ACAAACATTCAATTAACGGAACATTATGCTATTAATAAAAATCTAATGGG
TAATTTCATTTGCCCTTTAATGAATTAAATAAATAACTTTACATAACACA
TAATATTAGACACTGTTGTACTCTGTTAGCCCAAGGAAGTTTATTGTTGG
GGAATAAGTCATTACACTGCAAGTCCAAGTCGAGTCTCAAGTCTCTGCTC
ACAAGTCCAAGTACTTGAATATTTTTATCGAGTTCTGTTTGAATTATC
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