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Associated RNAi Experiments
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| LSalAtl2s800 | supercontig | LSalAtl2s800:101358..105515 + |
Analyses
This mRNA is derived from or has results from the following analyses
| Analysis Name | Date Performed |
|---|
| ensembl | 2013-09-26 .965016 |
Properties
| Property Name | Value |
|---|
| Logic name | ensemblgenomes |
| Biotype | protein_coding |
| Evidence | IEA |
Cross References
External references for this mRNA
Relationships
This mRNA is a part of the following gene feature(s):
The following exon feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of EMLSAP00000011562 >EMLSAP00000011562 ID=EMLSAP00000011562|Name=EMLSAP00000011562|organism=Lepeophtheirus salmonis|type=polypeptide|length=1092bp
PRAAHGLCLNHSGELLALARTRHDVNGREEVAGNEEEAWIEIWNLRGGAP
FFQRWLPTGXSSLEAIAFGAKGRMYSTGLHGYILSHDIQSGAVSKSPVSW
GASWCLDYHPLSKRIAVGTEEGVVCIFREESSGEIVYEKSLDKQEGRILS
LAWEPLSGDKMVTGSTDTLRVWDTKTGHPLHRLSTAXTFKGRETTVWSVA
YLDNEVIISGDSRGKTSFWNGKTGTLLDSYQTHKADVLTVGVDRKQKIAY
STGVDPVVMYFQPILHKDGRSKWIKSIHRTVNQHDNRSIMPIGPKTIALT
GIDSYLTLIDNSLELWKLGETKDNLKNSLEVGNILEMGQNPVNLLKIENN
DGRTIWCSDISDSGNFLAYAVQNSCRFYSLSVSPDEKVSPQLKRIKSQDK
FSDTHHIKFIPNSNKCLLINNVGKLILLSILEEEDGMSLHKLKQIEQNQI
KLTSSISKFDIEGEYIVLADFDDNVVVVNYETGDLVSHLPRYNHAPVSTV
SISLHKTLVFITYSNGIVVECSVKSGKYTSFSNNFFTFDANNIIYSNDLR
RTIRGAFYDPQNEDKIIMYDSSAVHIIDKCKVLENEKCDVKKLRTLGKSS
KIKHISTDESVGFSIKTINNFDNLLFFTRIEKGVVAVEFLFLCVFIIFNM
LIANSVTSEICGDDPLCSAIDHLHNRISSMEQPVWQKSLQKSSWKRCDEG
KCSCEPPKISGTVDCWGKFHKLDRIPEDQIIPLNVEILDLGNNHIPHLNP
NIFKNLIKLKELNLFGMGLKHLSAFIFETNFQIKTLXDNMLRILEPNLLS
SIHLLEYLDISGNMFEKLPDHIFKATPRLKMLNLSNNKIKVISPMLLSNL
TILEVLDLSQNRLRVLDMRSFIDLIRLNKLFMSRNIIETLPEDLFKNNMK
LKSIDLSINELQRLPPTLYENIEDLKYLFLAGNKFQSLNDENRFPKTLHH
LDMSNNVISICNISGFDYQWVYLDLSNNAIKNFSLTSLKSLKTLRLNLNQ
ITHLKFEDFSNSINELYLHRNLIETFNKDRSFEHLNSLVKLTIRDNYWTC
DCKIGSLVKWLNQFGINYDSTLCEAPADFFGMHINSTIALQC back to topmRNA from alignment at LSalAtl2s800:101358..105515+ Legend: polypeptideexon Hold the cursor over a type above to highlight its positions in the sequence below. >EMLSAT00000011562-707409 ID=EMLSAT00000011562-707409|Name=EMLSAT00000011562|organism=Lepeophtheirus salmonis|type=mRNA|length=4158bp|location=Sequence derived from alignment at LSalAtl2s800:101358..105515+ (Lepeophtheirus salmonis)
CCAAGAGCGGCTCATGGTTTGTGCCTGAATCACTCTGGTGAACTTTTGGC
TCTTGCAAGAACACGACACGATGTGAATGGAAGAGAAGAGGTTGCAGGAA
ATGAAGAAGAGGCATGGATTGAGATTTGGAATCTACGAGGAGGAGCTCCT
TTCTTTCAGCGTTGGCTTCCAACKGGARAATCCTCTCTAGAGGCTATTGC
ATTCGGAGCCAAAGGACGAATGTACTCCACGGGTTTGCACGGATATATCC
TGTCACATGACATTCAGTCTGGAGCAGTATCAAAGTCGCCTGTGAGTTGG
GGTGCTTCATGGTGCTTGGATTATCATCCTTTGAGCAAGAGGATCGCAGT
TGGTACGGAAGAAGGTGTTGTGTGCATATTCAGAGAAGAGTCTTCAGGCG
AGATTGTCTATGAAAAGTCACTTGATAAACAAGAAGGTCGAATCCTATCT
CTTGCTTGGGAACCTCTTTCTGGAGATAAGATGGTAACGGGCTCTACCGA
CACATTGAGGGTGTGGGATACCAAAACAGGGCATCCACTTCATAGACTTA
GCACGGCTCSTACATTCAAAGGTCGCGAAACAACTGTTTGGTCTGTTGCT
TATTTGGACAATGAAGTTATTATATCAGGTGATAGTCGAGGTAAAACTTC
ATTTTGGAATGGAAAAACAGGGACTTTATTGGATTCATACCAAACCCATA
AAGCAGACGTACTTACTGTTGGAGTAGATCGTAAGCAAAAAATTGCGTAC
TCAACTGGAGTAGATCCTGTTGTTATGTACTTTCAGCCCATCCTTCATAA
AGATGGTAGGAGTAAATGGATCAAATCTATACATCGAACTGTAAATCAAC
ATGACAATCGATCCATTATGCCTATTGGTCCTAAAACTATTGCTTTGACA
GGGATTGATTCCTATTTAACATTAATTGAGTCACGATCCAAATATTCTTA
TGCACCCTTGCCCTACGGAAATNGCTGTATCACTTTCTAGCGCTATAAGA
TGTTTGTTATTTCGCTACAGTAATTCCTTGGAACTCTGGAAATTAGGAGA
AACAAAGGACAATCTAAAGAATAGTTTAGAAGTAGGTAATATTTTAGAAA
TGGGTCAAAATCCAGTCAATCTTTTAAAGATAGAAAATAATGATGGAAGG
ACTATTTGGTGTTCAGATATATCAGATTCCGGAAATTTTCTTGCTTATGC
TGTTCAAAACTCATGTCGTTTTTATTCTTTGTCAGTCTCTCCAGATGAAA
AAGTATCTCCTCAACTTAAACGTATTAAGTCACAAGATAAATTTAGTGAT
ACACATCATATTAAATTTATACCCAATTCGAACAAGTGCTTACTTATTAA
CAATGTTGGGAAACTAATTTTACTCAGCATTTTAGAAGAGGAGGATGGGA
TGTCTTTGCATAAGTTAAAGCAAATTGAGCAAAATCAGATTAAGCTTACT
TCTAGTATATCTAAATTTGACATCGAAGGAGAATATATAGTACTAGCTGA
TTTTGATGACAATGTTGTCGTTGTGAATTATGAAACTGGGGATCTCGTAT
CCCATCTTCCAAGGTACAATCATGCNCCCGTATCTACTGTGTCAATAAGT
CTACATAAGACATTAGTTTTTATTACATATTCGAACGGTATTGTGGTTGA
ATGCTCTGTTAAATCCGGGAAATATACATCCTTTTCTAATAATTTTTTTA
CTTTCGATGCAAACAACATTATTTACTCAAATGATCTTAGAAGAACAATT
CGAGGCGCTTTTTATGATCCTCAAAACGAAGACAAGATCATCATGTACGA
CTCCTCTGCTGTCCACATTATTGATAAATGTAAAGTACTTGAGAATGAAA
AGTGTGATGTAAAGAAATTAAGAACTCTGGGAAAGTCTAGTAAAATAAAA
CATATTTCGACTGATGAGTCTGTTGGCTTTTCTATTAAAACCATTAATAA
TTTTGACAATTTGTTATTTTTTACTCGGATTGAGAAGGGCGTAGTTGCAG
TCGAGGTATTAACGAATAAACTGGAGGACAAATTGCCACCAAGTTTTAAA
GTAAAGAAATTTGGTCGCACTTGATTATGTTCTTTTATCTGTATTTTTTT
ATATGTAAAAATAAACTTATGTCGTTAACTCATTTTGCGTCTAAACTATC
ATTGATTGATTGTTATTTTATTGTATTAAATGTCAAAGGAGACGCGTTGT
ATCCAATCTAAGGAGGAAGGGAGCAAGAAAGTGGAGCATTTAAATGATCA
ATAATCCACAGAATTGCATCTAAATTTAAAGGCTTCAAAAAGGAGATATT
CTACTTATTTTTCTCTTCTATTCAGAGTTGAAGTTATTCCGTTTTAACTT
AAAAGGATAGTTCATCATGAAGTTTCTTTTTCTGTGCGTTTTTATAATAT
TTAACATGTTAATTGCAAATTCAGTTACATCCGAGATATGTGGGGATGAT
CCTTTGTGTAGCGCAATAGATCATTTACATAATAGGATTTCGAGTATGGA
GCAACCAGGTGAATTTTTTCCATATCATTAAACATTTTGAGTATGATAAG
AGGATTTATTATATTTCATGTACTTCCAAGTATGGCAAAAATCGTTACAA
AAATCATCATGGAAACGATGTGACGAAGGAAAATGTTCTTGTGAACCTCC
AAAAATATCAGGGACTGTTGATTGCTGGGGAAAATTTCACAAACTTGATA
GAATACCAGAAGATCAAATAATTCCTCTAAACGTGGAAATTTTGTACTTA
TTTTTGACATTGATAATCGTTAGCTTAAAATAATCTCTTTTTTTCAATAG
AGATTTGGGAAATAATCATATTCCTCACCTGAATCCTAACATTTTCAAAA
ATTTGATTAAATTGAAAGAACTGTAAGTTTATTCCATGATGTATTATAGC
TTAAATTAAAATTTGTATTNNNNTATACAGAAACTTGTTTGGAATGGGTT
TGAAACATTTGTCTGCATTTATATTTGAAACTAACTTTCAAATCAAAACG
CTGYAAGTAGAACTTGAAATGTTTTTCAAAGATCAATAACATAATATTTA
TCATAAGTAAAATTCAGGATAATATGCTGAGAATATTGGAGCCTAATTTA
TTAAGCTCAATCCATTTGTTGGAGTATCTGTAAGTTAAATATCGTAAAAT
TGGTTTGACTGTTTTTGAATTCCTTCTAGGGATATTTCAGGAAATATGTT
CGAAAAATTACCGGACCATATCTTCAAAGCTACACCCCGTCTAAAAATGC
TGAATTTATCAAATAATAAAATTAAAGTGATAAGTCCAATGTTATTATCT
AATTTAACAATTCTAGAAGTACTAGATTTATCTCAAAACCGATTAAGAGT
ACTAGATATGAGTAAGATCTGTATATTTTAAGAGAACCTCCATGTTTAAC
AAAAAATATCCTTAGGATCTTTTATTGATTTGATTCGTCTAAACAAGTTA
TTTATGAGTCGAAACATCATAGAAACCCTTCCAGAGGATTTGTTCAAGAA
TAATATGAAGCTGAAATCCATAGATTTGTCCATTAATGAGCTTCAGAGAT
TACCCCCAACCCTATATGAAAATATTGAGGATTTAAAGTACTTATTTCTA
GCAGGTAACAAATTTCAATCATTGAATGACGAAAATCGCTTTCCAAAAAC
ATTACATCATTTGGACATGAGTAATAATGTCATATCGATTTGTAATATAT
CTGGATTTGATTACCAATGGGTATATCTGGATTTGAGTAATAATGCCATC
AAGAACTTCTCTCTCACATCACTCAAGAGTCTAAAAACGTTAAGATTGAA
CTTAAATCAAATCACGCATTTAAAGTTTGAGGATTTTTCAAACAGCATCA
ATGAGTTGTAGGGTTCTAAAGTAATTTGAAGTGTTTTTTTTTTTTCATAT
GAGGCCTTTCATTACAGATACCTACACAGGAATCTTATTGAGACATTCAA
CAAAGATAGATCCTTTGAGCACTTAAACTCTTTAGTTAAGCTAACCATTC
GTGACAACTACTGGACTTGTGATTGCAAAATTGGGAGTTTAGTTAAATGG
TTGAATCAATTTGGAATTAACTATGACTCAACATTGTGTGAAGCTCCTGC
CGACTTTTTTGGAATGCATATCAATTCAACAATTGCTCTGCAATGTTGAT
AAGAAAAC back to top
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