EMLSAG00000006900, EMLSAG00000006900-689666 (gene) Lepeophtheirus salmonis
Overview
Associated RNAi Experiments
Nothing found Homology
BLAST of EMLSAG00000006900 vs. C. finmarchicus
Match: gi|592793374|gb|GAXK01161194.1| (TSA: Calanus finmarchicus comp34475_c3_seq1 transcribed RNA sequence) HSP 1 Score: 79.7221 bits (195), Expect = 2.661e-14 Identity = 117/430 (27.21%), Postives = 212/430 (49.30%), Query Frame = 0 Query: 173 YIQQLENIIVDKDYEIT-----------------LAEEKIANYEKKENERSSIDEKLSS---TSEELKKTIKELDKYKIVNEELEKSLKKIHDERDRKEKDLNDEIESLRQSKVKIKASDDEKTKLL-SDKELEISSLQKEVKHL--IQTDVANRQMIDNQNSELKVLEVQIKKLNEETKDCKVLGKKIGEQQNQIDSLKNQLNSKEREENMIEILKEELDSKNLEKNKLLDKI----SQLESKVIDASQLSELQLKISHLEEEIHSKNEEIRQARNQREATMFTYSKAFKTKEEEISRLKX---ESTRIRDVIIRSSPTKNNVASSLKNELEKKGXTIKILEEQVQQSLDVNVETQENSLKSEIDSLKCQISRANNKHSREIEKIKRTNGKVIQEYKDANRELQKQIGLTSNIS-DDSLQKSMLEADES 571 YI++LE+IIV+K+Y+I+ + +K N E+ E+ ++ KL T + LK ++EL N E+ +K+ RD DL + +S ++ +DE +L S KE+E SL K +++ ++TD +D ELKVL+ K ++ ++ + K E +I L + + E N +++LK ELDSK+ E +++ +K+ S L +K + SQLSE ++ L+ ++ +K +I + + R+ M Y FK K+ EI +K E + +++ +++PTK L+ +L + + +E++ + E Q + LK+E+ L+ Q+ +H RE+ + K N KVI EYK+ N+ LQ+++ + + D LEAD+S Sbjct: 4059 YIKELEDIIVEKEYKISELENVSDEVDNVVPQSDIGADKFKNLEE---EKCKLETKLKGELETQKLLKIQVEELTVKVAENAEMMAHHEKMKQHRD----DLEKRVVECEKSSRQLATVEDELRELKDSKKEVE-ESLAKTLENGAKLKTD------LDEAKDELKVLKRATKTGAKDAQEVHEVKSKNDELLKEISRLSSVATANRGENNALDVLKSELDSKSKEISQIQEKVEHLRSDLGAKDKEISQLSE---RVEILQADVDAKEYDITKTKEDRDKLMEHYEMIFKKKQSEIDSIKALDREKGSLGEIMAKATPTKQ--TGELREKLARSEADLSEFKEKL-----LKEEDQVSELKNELKVLQKQMDTKTAQHEREVNRTKLANQKVIAEYKETNKVLQRRVEIVVDSPRDHDTTSPTLEADDS 5276
BLAST of EMLSAG00000006900 vs. C. finmarchicus
Match: gi|592794359|gb|GAXK01160209.1| (TSA: Calanus finmarchicus comp143331_c0_seq2 transcribed RNA sequence) HSP 1 Score: 34.6538 bits (78), Expect = 1.352e+0 Identity = 94/348 (27.01%), Postives = 165/348 (47.41%), Query Frame = 0 Query: 139 IEKVHARISELKCGLHKSDKEISSLNNKVEENASYIQQLENIIVDKDYEITLAEEKIANYE-------KKENERSSIDEKLSSTSEEL----------KKTIKELD---------KYKIVNEELEKSL-------KKIHDERD-RKEKD--------LNDEIESLRQSKV----KIKASDDE-KTKLLSDKELEI------SSLQKEV----KHLIQ-------TDVANRQMIDNQNSELKVLEVQIKKLNEET-----KDCKVLGK---KIGEQQNQIDSL--------------KNQLNSKEREENMIEILKEELDSKNLEKN----KLLDKISQLESKVIDASQL 396 IE++ + ELK K + IS L K+ ++ IQ+L+ +++KD + +EEK A E KK ++S ++ +L E+L +K +++ D KY + N LE+ L +K++ E+D R++KD +++ I++L+ K+ ++K D + KTK + KELE S+L+ E KH ++ V +D +N +++ L I+ L EE +D KV+GK +IGE +N++D L KN + K++E+ ++I+ E D EKN KL KI +L +K+I+ +L Sbjct: 654 IEEIKVKDEELK----KKEVSISDLTEKLSKSEKLIQELQKTLIEKDKSLVRSEEKNARLEGKISWLSKKRPQKSDVENRLLKAEEDLEKIQDDKQKIEKVLEQRDDEVARLEEQKYFLENSLLERQLEVKKKDEQKMYLEKDVREQKDHFEKQLREMHEGIKTLKSEKISFQKEMKDVDKQMKTKTHNIKELEAALAKNDSTLKDEKSTKEKHSLKIRQLNEAAKVTEEYKLDLEN-KIQELNTTIQNLQEENNTIILEDLKVIGKGREEIGELKNKLDELEVEIETLEEAKEAFKNNMTGKDQEQISLQIIVSEKDEVIFEKNKSIEKLRKKIEKLRTKLIETDEL 1682
BLAST of EMLSAG00000006900 vs. C. finmarchicus
Match: gi|592794360|gb|GAXK01160208.1| (TSA: Calanus finmarchicus comp143331_c0_seq1 transcribed RNA sequence) HSP 1 Score: 32.3426 bits (72), Expect = 6.574e+0 Identity = 86/327 (26.30%), Postives = 154/327 (47.09%), Query Frame = 0 Query: 160 ISSLNNKVEENASYIQQLENIIVDKDYEITLAEEKIANYE-------KKENERSSIDEKLSSTSEELKKT-----------------IKELD--KYKIVNEELEKSL-------KKIHDERD-RKEKD--------LNDEIESLRQSKV----KIKASDDE-KTKLLSDKELEI------SSLQKEV----KHLIQ-------TDVANRQMIDNQNSELKVLEVQIKKLNEET-----KDCKVLGK---KIGEQQNQIDSL--------------KNQLNSKEREENMIEILKEELDSKNLEKN----KLLDKISQLESKVIDASQL 396 IS ++ ++ IQ+L+ +++KD + +EEK A E KK ++S ++ +L + E+L+K + L+ KY + N LE+ L +K++ E+D R++KD +++ I++L+ K+ ++K D + KTK + KELE S+L+ E KH ++ V +D +N +++ L I+ L EE +D KV+GK +IGE +N++D L KN + K++E+ ++I+ E D EKN KL KI +L +K+I+ +L Sbjct: 726 ISDFTERLSKSEKLIQELQKTLIEKDKSLVRSEEKNARLEGKISWLSKKRPQKSDVENRLLKSEEDLEKMQDEKQKIEKVLEQRDDEVARLEEQKYFLENSLLERQLEVKKKDEQKMYLEKDVREQKDHFEKQLREMHEGIKTLKSEKISFQKEMKDVDKQMKTKTHNIKELEAALAKNDSTLKDEKSTKEKHSLKIRQLNEAAKVTEEYKLDLEN-KIQELNTTIQNLQEENNTIILEDLKVIGKGREEIGELKNKLDELEVEIETLEEAKEAFKNNMTGKDQEQISLQIIVSEKDEVIFEKNKSIEKLRKKIEKLRTKLIETDEL 1703
BLAST of EMLSAG00000006900 vs. L. salmonis peptides
Match: EMLSAP00000006900 (pep:novel supercontig:LSalAtl2s:LSalAtl2s390:414906:420715:1 gene:EMLSAG00000006900 transcript:EMLSAT00000006900 description:"augustus_masked-LSalAtl2s390-processed-gene-3.6") HSP 1 Score: 1431.77 bits (3705), Expect = 0.000e+0 Identity = 736/736 (100.00%), Postives = 736/736 (100.00%), Query Frame = 0 Query: 1 MKKNSIEEYXKLEDENRTIKEDFELFKDKAELRIEDFQITLQNAMDTSEALLAKNKELKSKISLLESEVSVLGSLSSPCGKERQKDILPDMSVLETKEFENVEHKIITEELDNVRKVLEEKDTIIKTNNKSLSERDKEIEKVHARISELKCGLHKSDKEISSLNNKVEENASYIQQLENIIVDKDYEITLAEEKIANYEKKENERSSIDEKLSSTSEELKKTIKELDKYKIVNEELEKSLKKIHDERDRKEKDLNDEIESLRQSKVKIKASDDEKTKLLSDKELEISSLQKEVKHLIQTDVANRQMIDNQNSELKVLEVQIKKLNEETKDCKVLGKKIGEQQNQIDSLKNQLNSKEREENMIEILKEELDSKNLEKNKLLDKISQLESKVIDASQLSELQLKISHLEEEIHSKNEEIRQARNQREATMFTYSKAFKTKEEEISRLKXESTRIRDVIIRSSPTKNNVASSLKNELEKKGXTIKILEEQVQQSLDVNVETQENSLKSEIDSLKCQISRANNKHSREIEKIKRTNGKVIQEYKDANRELQKQIGLTSNISDDSLQKSMLEADESLNVSVEISSKIKTKKKGRVRSARKKSRISESSTLSPISSTSAKGNFDNNTEEGTEGDENIPYNTRNSSQITLSVRKPRRKYVNMEDNFKETPRKGRSTLKNVGNSDISIDNSIPIPTPRRSTRKTLYNPGKLEVFSPVQDLEESNSSPHTIVKRQLRARKKKLAS 736 MKKNSIEEYXKLEDENRTIKEDFELFKDKAELRIEDFQITLQNAMDTSEALLAKNKELKSKISLLESEVSVLGSLSSPCGKERQKDILPDMSVLETKEFENVEHKIITEELDNVRKVLEEKDTIIKTNNKSLSERDKEIEKVHARISELKCGLHKSDKEISSLNNKVEENASYIQQLENIIVDKDYEITLAEEKIANYEKKENERSSIDEKLSSTSEELKKTIKELDKYKIVNEELEKSLKKIHDERDRKEKDLNDEIESLRQSKVKIKASDDEKTKLLSDKELEISSLQKEVKHLIQTDVANRQMIDNQNSELKVLEVQIKKLNEETKDCKVLGKKIGEQQNQIDSLKNQLNSKEREENMIEILKEELDSKNLEKNKLLDKISQLESKVIDASQLSELQLKISHLEEEIHSKNEEIRQARNQREATMFTYSKAFKTKEEEISRLKXESTRIRDVIIRSSPTKNNVASSLKNELEKKGXTIKILEEQVQQSLDVNVETQENSLKSEIDSLKCQISRANNKHSREIEKIKRTNGKVIQEYKDANRELQKQIGLTSNISDDSLQKSMLEADESLNVSVEISSKIKTKKKGRVRSARKKSRISESSTLSPISSTSAKGNFDNNTEEGTEGDENIPYNTRNSSQITLSVRKPRRKYVNMEDNFKETPRKGRSTLKNVGNSDISIDNSIPIPTPRRSTRKTLYNPGKLEVFSPVQDLEESNSSPHTIVKRQLRARKKKLAS Sbjct: 1 MKKNSIEEYXKLEDENRTIKEDFELFKDKAELRIEDFQITLQNAMDTSEALLAKNKELKSKISLLESEVSVLGSLSSPCGKERQKDILPDMSVLETKEFENVEHKIITEELDNVRKVLEEKDTIIKTNNKSLSERDKEIEKVHARISELKCGLHKSDKEISSLNNKVEENASYIQQLENIIVDKDYEITLAEEKIANYEKKENERSSIDEKLSSTSEELKKTIKELDKYKIVNEELEKSLKKIHDERDRKEKDLNDEIESLRQSKVKIKASDDEKTKLLSDKELEISSLQKEVKHLIQTDVANRQMIDNQNSELKVLEVQIKKLNEETKDCKVLGKKIGEQQNQIDSLKNQLNSKEREENMIEILKEELDSKNLEKNKLLDKISQLESKVIDASQLSELQLKISHLEEEIHSKNEEIRQARNQREATMFTYSKAFKTKEEEISRLKXESTRIRDVIIRSSPTKNNVASSLKNELEKKGXTIKILEEQVQQSLDVNVETQENSLKSEIDSLKCQISRANNKHSREIEKIKRTNGKVIQEYKDANRELQKQIGLTSNISDDSLQKSMLEADESLNVSVEISSKIKTKKKGRVRSARKKSRISESSTLSPISSTSAKGNFDNNTEEGTEGDENIPYNTRNSSQITLSVRKPRRKYVNMEDNFKETPRKGRSTLKNVGNSDISIDNSIPIPTPRRSTRKTLYNPGKLEVFSPVQDLEESNSSPHTIVKRQLRARKKKLAS 736
BLAST of EMLSAG00000006900 vs. L. salmonis peptides
Match: EMLSAP00000006390 (pep:novel supercontig:LSalAtl2s:LSalAtl2s350:207605:212969:1 gene:EMLSAG00000006390 transcript:EMLSAT00000006390 description:"maker-LSalAtl2s350-augustus-gene-2.6") HSP 1 Score: 105.916 bits (263), Expect = 1.432e-23 Identity = 69/168 (41.07%), Postives = 113/168 (67.26%), Query Frame = 0 Query: 211 KLSSTSEELKKTIKELDKYKIVNEELEKSLKKIHDERDRKEKDLNDEIESLRQSKVKIKASDDEKTKLLSDKELEISSLQKEVKHLIQTDVANRQMIDNQNSELKVLEVQIKKLNEETKDCKVLGKKIGEQQNQIDSLKNQLNSKEREENMIEILKEELDSKNLEKNK 378 +L +TS E+ + +L+K + + E+ K LKK+ +E++R EKDLNDEIE+LR+SK+KI++S+ EK LLSDKE+EI L+KE+K+LIQ VAN+Q +++ + E+++L E+QN I++L+ Q+ S ++E+N+I+IL++EL K E +K Sbjct: 811 RLDTTSSEVDGLLIKLNKTRQLYEDQGKILKKVEEEKNRLEKDLNDEIETLRRSKIKIESSEHEKKNLLSDKEIEIQKLEKEIKNLIQKGVANQQSLEHNSKEIEILR-----------------SDASEKQNIIENLEVQIKSSQKEDNVIKILRKELKLKEYELSK 961 HSP 2 Score: 80.4925 bits (197), Expect = 9.993e-16 Identity = 134/443 (30.25%), Postives = 228/443 (51.47%), Query Frame = 0 Query: 334 LGKKIGEQQNQIDSLKNQLN-SKEREENMIEILKEELDSKNLEKNKLLDKISQLE-SKV-IDASQ------LSELQLKISHLEEEIHSKNEEIRQARNQREATMFTYSKAFKTKEEEISRLKXESTRIRDVI------IRSSPTKNNVASSLKNELE-------KKGXTIKILEEQVQQSL-DVNVETQENSLKSEIDSLKCQISRANNKHSREIEKIKRTNGKVIQEYKDANRELQKQIGLTSN--ISDDSLQ---KSMLEADESLNV-----SVEISSKIKTKKKGRVRSARKKSRISESSTLSPISSTSAKGNFDNNTEEGTEGDENIPYNTRNSSQITLS--VRKPRRKYVNMEDNFK----ETPRKGRSTLKNVGNSDISIDNSIPIPTPRRSTRKTLYNPGKLEVFSPVQDL-----EESNSSPHTIVKRQLRARKK 732 L K++ +++D L +LN +++ E+ +ILK+ + KN + L D+I L SK+ I++S+ LS+ +++I LE+EI KN + NQ ++ + +EI L+ +++ +++I I+SS ++NV L+ EL+ KK I+ +E ++++SL D VE + + EI+SLK + +AN HS+E +KIK+ N KVI EYKDAN+ELQKQ+G+ SN +DDS Q + M E+D+S + E+ + K K++G+VR+ + S +S+ ++ ++N E EN ++ S+++T S V K ++K VN D + K R+TLK + + + P T N + EV +++L EE +S + KRQLR RKK Sbjct: 808 LRKRLDTTSSEVDGLLIKLNKTRQLYEDQGKILKKVEEEKNRLEKDLNDEIETLRRSKIKIESSEHEKKNLLSDKEIEIQKLEKEI--KNLIQKGVANQ---------QSLEHNSKEIEILRSDASEKQNIIENLEVQIKSSQKEDNVIKILRKELKLKEYELSKKEAIIREVELKLEKSLYDGEVE---DLPRDEIESLKRDVIQANAYHSKEFDKIKKANEKVINEYKDANKELQKQVGICSNRDTADDSSQLVHQQMNESDQSFKIDSSILPTELQASGKKKRRGKVRNTQNNSTKCNNSSSILVN--------ESNVENELNDSENSVSRSQKSNKVTRSRPVHKTKKKNVNDVDRSSISELSSVEKERNTLKETHSFEFLHSGTENTPRRSNRTTNNN-NFRQYEVLKSLENLTEIEEEEERASQSFVGKRQLRTRKK 1227
BLAST of EMLSAG00000006900 vs. L. salmonis peptides
Match: EMLSAP00000000304 (pep:novel supercontig:LSalAtl2s:LSalAtl2s1044:4576:5080:-1 gene:EMLSAG00000000304 transcript:EMLSAT00000000304 description:"maker-LSalAtl2s1044-augustus-gene-0.32") HSP 1 Score: 90.1225 bits (222), Expect = 9.330e-21 Identity = 52/111 (46.85%), Postives = 86/111 (77.48%), Query Frame = 0 Query: 211 KLSSTSEELKKTIKELDKYKIVNEELEKSLKKIHDERDRKEKDLNDEIESLRQSKVKIKASDDEKTKLLSDKELEISSLQKEVKHLIQTDVANRQMIDNQNSELKVLEVQI 321 +L STS E+ + +LDK + + E+ +K LKK+ +E++R +KDLNDEIE+LR+SK+KIK+S+DEK K+LS+KE EI +L+KE+K+L++ +AN+Q +++ + E++ L I Sbjct: 13 RLDSTSSEVNGLLIKLDKTRQLYEDQDKVLKKVEEEKNRLDKDLNDEIETLRRSKIKIKSSEDEKKKILSEKENEIQNLEKEIKNLMKKGIANQQSLEDNSKEIQNLRCDI 123
BLAST of EMLSAG00000006900 vs. L. salmonis peptides
Match: EMLSAP00000000301 (pep:novel supercontig:LSalAtl2s:LSalAtl2s1044:3402:4048:-1 gene:EMLSAG00000000301 transcript:EMLSAT00000000301 description:"snap_masked-LSalAtl2s1044-processed-gene-0.17") HSP 1 Score: 70.4774 bits (171), Expect = 7.108e-14 Identity = 40/86 (46.51%), Postives = 61/86 (70.93%), Query Frame = 0 Query: 500 ENSLKSEIDSLKCQISRANNKHSREIEKIKRTNGKVIQEYKDANRELQKQIGLTSN--ISDDS---LQKSMLEADESLNVSVEISS 580 E+ L+ EI+SLK +++AN HS+E++KIK+ N KVI EYKDAN+ELQKQ+G+ SN ++DS + + M ++D+S + I S Sbjct: 6 EDLLRDEIESLKRDVTQANANHSKELDKIKKANDKVIIEYKDANKELQKQVGICSNRDAAEDSSQLIHQQMNKSDQSFKIDSSIIS 91
BLAST of EMLSAG00000006900 vs. L. salmonis peptides
Match: EMLSAP00000006410 (pep:novel supercontig:LSalAtl2s:LSalAtl2s350:759416:762862:1 gene:EMLSAG00000006410 transcript:EMLSAT00000006410 description:"maker-LSalAtl2s350-augustus-gene-6.33") HSP 1 Score: 66.2402 bits (160), Expect = 9.437e-13 Identity = 45/102 (44.12%), Postives = 65/102 (63.73%), Query Frame = 0 Query: 500 ENSLKSEIDSLKCQISRANNKHSREIEKIKRTNGKVIQEYKDANRELQKQIGLTSN--ISDDSLQ---KSMLEADESLNV-------SVEISSKIKTKKKGR 589 E+ L+ EI+SLK + +AN HS E++KI++ N KVI EYKDAN+ELQKQ+ + SN +DDS Q + M ++D+S + ++IS K K K K R Sbjct: 12 EDLLRDEIESLKQDVIQANIYHSMELDKIRKANEKVINEYKDANKELQKQVCICSNKDKADDSSQLVYQQMNKSDQSFKIDSSIQSAGLQISGKNKMKSKVR 113
BLAST of EMLSAG00000006900 vs. Tigriopus kingsejongenis genes
Match: maker-scaffold421_size176100-snap-gene-0.31 (protein:Tk10559 transcript:maker-scaffold421_size176100-snap-gene-0.31-mRNA-1 annotation:"golgin subfamily a member 4-like") HSP 1 Score: 75.485 bits (184), Expect = 3.553e-14 Identity = 86/315 (27.30%), Postives = 158/315 (50.16%), Query Frame = 0 Query: 441 EISRLKXESTRIRDVIIRSSPTKNNVAS------SLKNELEKKGXTIKILEEQVQQSLDVNVETQENSLKSEIDSLKCQISRANNKHSREIEKIKRTNGKVIQEYKDANRELQKQIGLTSNISDD-------SLQKSMLEADESLN---VSVEISSKIKTKKKGRVRSARKKSRISESSTLSPISSTSAKGNFDNNTEEGTEGDENIPYNTRNSSQITLS--VRK-PRRKYVNMEDNFKETPRKGRST---LKNVGNSDISIDNSIPIPTP--RRSTRKTLYNPGKL-EVFSPVQDLEESNSSPHTIVKRQLRAR 730 E++ K E ++R+V+ RS+P K ++++ L+ EL KK IK LE + ++ + E K E+ +L+ ++ H +E+ +IK+ + ++EY+ N EL +Q+G + S +E D+S N + E + + +++G + + R + + T S + D+ E + DE P + S+++T + VRK RR + ++++ ET R G S LK++ N D++ ++S+ TP S ++TLY K+ +VF+P + S +P TIVKRQLR+R Sbjct: 1077 ELAMEKRECHKLREVMSRSTPNKASISARETEVTMLREELMKKTEVIKNLEVMIPTRKELTYSSDEEDFKKELGNLQKEMMVLKASHEKEMLRIKKASDMALEEYRHTNSELLRQMGRPPPTASSSASSSFVGTDPSAIEGDDSQNDNSLIEETPNNSRKRRRGGQTARERSRRAAANRTGDKTDSATQASFEDSTLENDPDFDEERP---KRSTRLTRAKPVRKAARRDHSALDESGSET-RPGTSASSVLKDLNNLDVN-NSSVEHHTPSNNSSRKRTLYKSSKVAQVFTPPAEEPMSTLTPKTIVKRQLRSR 1386 The following BLAST results are available for this feature:
BLAST of EMLSAG00000006900 vs. GO
Analysis Date: 2014-04-02 (Blast vs. GO) Total hits: 0
BLAST of EMLSAG00000006900 vs. C. finmarchicus
Analysis Date: 2014-05-09 (TblastN vs C. finmarchicus TSA) Total hits: 3
BLAST of EMLSAG00000006900 vs. L. salmonis peptides
Analysis Date: 2014-05-10 (Blastp vs. self) Total hits: 5
BLAST of EMLSAG00000006900 vs. SwissProt
Analysis Date: 2017-02-10 (Blastp vs. SwissProt) Total hits: 0
BLAST of EMLSAG00000006900 vs. Select Arthropod Genomes
Analysis Date: 2017-02-20 (Blastp vs. Selected Arthropods) Total hits: 0
BLAST of EMLSAG00000006900 vs. nr
Analysis Date: 2017-02-20 (Blastp vs. NR (2/2017)) Total hits: 0
BLAST of EMLSAG00000006900 vs. Tigriopus kingsejongenis genes
Analysis Date: 2018-04-18 (Blastp vs. Tigriopus kingsejongensis proteins) Total hits: 1
Alignments
The following features are aligned
Analyses
This gene is derived from or has results from the following analyses
Properties
Cross References
External references for this gene
Relationships
The following mRNA feature(s) are a part of this gene:
Sequences
The following sequences are available for this feature:
gene from alignment at LSalAtl2s390:414906..420715+ Legend: mRNA Hold the cursor over a type above to highlight its positions in the sequence below.>EMLSAG00000006900-689666 ID=EMLSAG00000006900-689666|Name=EMLSAG00000006900|organism=Lepeophtheirus salmonis|type=gene|length=5810bp|location=Sequence derived from alignment at LSalAtl2s390:414906..420715+ (Lepeophtheirus salmonis)back to top Add to Basket
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