EMLSAG00000012106, EMLSAG00000012106-694872 (gene) Lepeophtheirus salmonis
Overview
Associated RNAi Experiments
Nothing found Homology
BLAST of EMLSAG00000012106 vs. C. finmarchicus
Match: gi|592912474|gb|GAXK01045901.1| (TSA: Calanus finmarchicus comp199420_c0_seq1 transcribed RNA sequence) HSP 1 Score: 125.946 bits (315), Expect = 5.325e-33 Identity = 58/102 (56.86%), Postives = 70/102 (68.63%), Query Frame = 0 Query: 139 TKLYQLSLFYFLSILHLVPAPVPRCSPFIIINKLAEFSNVLSDSNPYFPVPPCEYGGPGNAIRYGDYEXVFVLARPDLIPRHNFYELIWFMKYGASRFVRYI 240 T L L L LVPAPVPRCSPFIIINKL E++++ SDSN YFPV PCEYGGP A+ GDY VF+L P+ +PRHN YE +WF+K G +R R + Sbjct: 131 THFPSLVLGLLLISFPLVPAPVPRCSPFIIINKLVEWTSLWSDSNSYFPVGPCEYGGPFRALEEGDYNAVFLLDEPEKVPRHNIYEFVWFLKTGLTRMKRMM 436
BLAST of EMLSAG00000012106 vs. C. finmarchicus
Match: gi|592824247|gb|GAXK01130321.1| (TSA: Calanus finmarchicus comp70139_c0_seq1 transcribed RNA sequence) HSP 1 Score: 116.701 bits (291), Expect = 2.677e-30 Identity = 58/108 (53.70%), Postives = 68/108 (62.96%), Query Frame = 0 Query: 133 SALIEMTKLYQLSLFYFLSILHLVPAPVPRCSPFIIINKLAEFSNVLSDSNPYFPVPPCEYGGPGNAIRYGDYEXVFVLARPDLIPRHNFYELIWFMKYGASRFVRYI 240 LI L+QL+L +F LH V APVPRCSP IINK+ E ++ SD NPYFPV CEYGGP AI GD+ VF+L PD IP HN YEL W +K G R R + Sbjct: 25 QTLIVKMNLWQLTLLFFH--LHQVFAPVPRCSPLFIINKVPESMSLTSDMNPYFPVAECEYGGPIQAILAGDFNSVFILDEPDKIPLHNLYELTWIVKKGWPRLQRIL 342
BLAST of EMLSAG00000012106 vs. C. finmarchicus
Match: gi|592831584|gb|GAXK01125960.1| (TSA: Calanus finmarchicus comp311264_c1_seq1 transcribed RNA sequence) HSP 1 Score: 100.523 bits (249), Expect = 6.145e-25 Identity = 49/83 (59.04%), Postives = 57/83 (68.67%), Query Frame = 0 Query: 136 IEMTKLYQLSLFYFLSILHLVPAPVPRCSPFIIINKLAEFSNVLSDSNPYFPVPPCEYGGPGNAIRYGDYEXVFVLARPDLIP 218 + M L L FLS+ PAPVPRCSPFI INKLAE++N+ SDSNPYFPVPPCEYGGP A+ GD V V ++P IP Sbjct: 2 LTMHNTAPLILLVFLSLPSPTPAPVPRCSPFIFINKLAEWTNIWSDSNPYFPVPPCEYGGPVAALTKGDIRSVLVTSQPLNIP 250
BLAST of EMLSAG00000012106 vs. C. finmarchicus
Match: gi|592841163|gb|GAXK01116381.1| (TSA: Calanus finmarchicus comp295798_c0_seq1 transcribed RNA sequence) HSP 1 Score: 89.3521 bits (220), Expect = 1.663e-19 Identity = 46/106 (43.40%), Postives = 62/106 (58.49%), Query Frame = 0 Query: 150 LSILHLVP-----APVPRCSPFIIINKLAEFSNVLSDSNPYFPVPPCEYGGPGNAIRYGDYEXVFVLARPDLIPRHNFYELIWFMKYGASRFVRYIYSRLLAKNNF 250 L L LVP AP+P CSPFI++NK+ E +N+LSD +PY+P+PPC +GGP A+ GD VF+ +PRH +YEL W + G R I + K N Sbjct: 206 LLALALVPPIPCLAPMPPCSPFILMNKMIESTNLLSDIHPYYPIPPCPHGGPLQALSKGDINSVFIKD----VPRHLWYELSWLLAVGLPRKWEAITGKYPVKVNM 511
BLAST of EMLSAG00000012106 vs. C. finmarchicus
Match: gi|592824246|gb|GAXK01130322.1| (TSA: Calanus finmarchicus comp70139_c0_seq2 transcribed RNA sequence) HSP 1 Score: 46.9802 bits (110), Expect = 6.140e-6 Identity = 19/38 (50.00%), Postives = 24/38 (63.16%), Query Frame = 0 Query: 203 GDYEXVFVLARPDLIPRHNFYELIWFMKYGASRFVRYI 240 GD+ VF+L +PD IP HN YEL W +K G R R + Sbjct: 1 GDFNSVFILDQPDKIPLHNLYELTWIVKKGWPRLQRIL 114
BLAST of EMLSAG00000012106 vs. C. finmarchicus
Match: gi|592831585|gb|GAXK01125959.1| (TSA: Calanus finmarchicus comp311264_c0_seq2 transcribed RNA sequence) HSP 1 Score: 33.4982 bits (75), Expect = 3.083e-1 Identity = 19/56 (33.93%), Postives = 24/56 (42.86%), Query Frame = 0 Query: 217 IPRHNFYELIWFMKYGASRFVR-------YIYSRLLAKNNFVELYLSNIYFTKGQF 265 IP HN YE +W +K G R VR +IY + + F S Y GQ Sbjct: 283 IPLHNLYEFVWLLKTGFPRMVRILAGKEPFIYDTKILREGFQH---STPYVRTGQL 441
BLAST of EMLSAG00000012106 vs. C. finmarchicus
Match: gi|592831586|gb|GAXK01125958.1| (TSA: Calanus finmarchicus comp311264_c0_seq1 transcribed RNA sequence) HSP 1 Score: 33.8834 bits (76), Expect = 3.435e-1 Identity = 20/61 (32.79%), Postives = 27/61 (44.26%), Query Frame = 0 Query: 212 ARPDLIPRHNFYELIWFMKYGASRFVR-------YIYSRLLAKNNFVELYLSNIYFTKGQF 265 ++P IP HN YE +W +K G R VR +IY + + F S Y GQ Sbjct: 485 SQPLNIPLHNLYEFVWLLKTGFPRMVRILAGKEPFIYDTKILREGFQH---STPYVRTGQL 658
BLAST of EMLSAG00000012106 vs. C. finmarchicus
Match: gi|592888175|gb|GAXK01070200.1| (TSA: Calanus finmarchicus comp5261649_c0_seq1 transcribed RNA sequence) HSP 1 Score: 31.187 bits (69), Expect = 2.606e+0 Identity = 22/63 (34.92%), Postives = 28/63 (44.44%), Query Frame = 0 Query: 142 YQLSLFYFLSILHLVPAPVPRCSPFIIINKLAEFSNVLSDSNPYFPVPPCEYGGPGNAIRYGD 204 Y +S F+S VP VP P I+ A +LS S P V C + PG + YGD Sbjct: 177 YGISEKNFIS----VPGEVPGHPPPIVPVIAAGSGAILSCSGPVALVTQCAWQSPGQSCCYGD 353
BLAST of EMLSAG00000012106 vs. C. finmarchicus
Match: gi|592823986|gb|GAXK01130582.1| (TSA: Calanus finmarchicus comp178458_c0_seq3 transcribed RNA sequence) HSP 1 Score: 31.187 bits (69), Expect = 3.101e+0 Identity = 17/37 (45.95%), Postives = 22/37 (59.46%), Query Frame = 0 Query: 68 NLEKKIKDNPTKSMNHLVNNFFVAARTIRKAVKGDLG 104 +L K K +PT S+ H NN VAAR +R GD+G Sbjct: 265 SLFKSAKASPTPSVRHGSNNASVAAR-LRVTSSGDIG 372
BLAST of EMLSAG00000012106 vs. C. finmarchicus
Match: gi|592823987|gb|GAXK01130581.1| (TSA: Calanus finmarchicus comp178458_c0_seq2 transcribed RNA sequence) HSP 1 Score: 31.187 bits (69), Expect = 3.323e+0 Identity = 17/37 (45.95%), Postives = 22/37 (59.46%), Query Frame = 0 Query: 68 NLEKKIKDNPTKSMNHLVNNFFVAARTIRKAVKGDLG 104 +L K K +PT S+ H NN VAAR +R GD+G Sbjct: 329 SLFKSAKASPTPSVRHGSNNASVAAR-LRVTSSGDIG 436
BLAST of EMLSAG00000012106 vs. L. salmonis peptides
Match: EMLSAP00000012106 (pep:novel supercontig:LSalAtl2s:LSalAtl2s868:259044:273007:1 gene:EMLSAG00000012106 transcript:EMLSAT00000012106 description:"augustus-LSalAtl2s868-processed-gene-1.7") HSP 1 Score: 538.495 bits (1386), Expect = 0.000e+0 Identity = 266/266 (100.00%), Postives = 266/266 (100.00%), Query Frame = 0 Query: 1 MSEQEAKRQPISDILEAVVEVARILDIVKRPRSLVFKVANMKKNGEYLSKKAGSGRXNLKKDLEILSNLEKKIKDNPTKSMNHLVNNFFVAARTIRKAVKGDLGFFSYTRTPRHLLTKKKSNKTFFNTKVTDSALIEMTKLYQLSLFYFLSILHLVPAPVPRCSPFIIINKLAEFSNVLSDSNPYFPVPPCEYGGPGNAIRYGDYEXVFVLARPDLIPRHNFYELIWFMKYGASRFVRYIYSRLLAKNNFVELYLSNIYFTKGQFL 266 MSEQEAKRQPISDILEAVVEVARILDIVKRPRSLVFKVANMKKNGEYLSKKAGSGRXNLKKDLEILSNLEKKIKDNPTKSMNHLVNNFFVAARTIRKAVKGDLGFFSYTRTPRHLLTKKKSNKTFFNTKVTDSALIEMTKLYQLSLFYFLSILHLVPAPVPRCSPFIIINKLAEFSNVLSDSNPYFPVPPCEYGGPGNAIRYGDYEXVFVLARPDLIPRHNFYELIWFMKYGASRFVRYIYSRLLAKNNFVELYLSNIYFTKGQFL Sbjct: 1 MSEQEAKRQPISDILEAVVEVARILDIVKRPRSLVFKVANMKKNGEYLSKKAGSGRXNLKKDLEILSNLEKKIKDNPTKSMNHLVNNFFVAARTIRKAVKGDLGFFSYTRTPRHLLTKKKSNKTFFNTKVTDSALIEMTKLYQLSLFYFLSILHLVPAPVPRCSPFIIINKLAEFSNVLSDSNPYFPVPPCEYGGPGNAIRYGDYEXVFVLARPDLIPRHNFYELIWFMKYGASRFVRYIYSRLLAKNNFVELYLSNIYFTKGQFL 266
BLAST of EMLSAG00000012106 vs. L. salmonis peptides
Match: EMLSAP00000000792 (pep:novel supercontig:LSalAtl2s:LSalAtl2s1130:7195:13371:1 gene:EMLSAG00000000792 transcript:EMLSAT00000000792 description:"maker-LSalAtl2s1130-augustus-gene-0.6") HSP 1 Score: 156.377 bits (394), Expect = 1.289e-46 Identity = 71/99 (71.72%), Postives = 81/99 (81.82%), Query Frame = 0 Query: 144 LSLFYFLSILHL----VPAPVPRCSPFIIINKLAEFSNVLSDSNPYFPVPPCEYGGPGNAIRYGDYEXVFVLARPDLIPRHNFYELIWFMKYGASRFVR 238 S+ Y I+ + VPAPVPRCSPFIIINKLAEFSN++SDSNPYFPVPPCEYGGP AIR GDYE FVLARP+L+PRHNFYEL+WF+K+GA R R Sbjct: 5 FSIIYLCVIVSVLIPSVPAPVPRCSPFIIINKLAEFSNLVSDSNPYFPVPPCEYGGPLEAIRAGDYEAXFVLARPELVPRHNFYELVWFLKFGAERLGR 103
BLAST of EMLSAG00000012106 vs. L. salmonis peptides
Match: EMLSAP00000008303 (pep:novel supercontig:LSalAtl2s:LSalAtl2s503:210067:213886:1 gene:EMLSAG00000008303 transcript:EMLSAT00000008303 description:"snap_masked-LSalAtl2s503-processed-gene-2.8") HSP 1 Score: 50.447 bits (119), Expect = 1.250e-7 Identity = 30/94 (31.91%), Postives = 48/94 (51.06%), Query Frame = 0 Query: 24 ILDIVKRPRSLVFKVANMKKNGEYLSKKAGSGRXNLKKDLEILSNLEKKIKDNPTKSMNHLVNNFFVAARTIRKAVKGDLGFFSYTRTPRHLLT 117 I ++ P + V+++ N + KA S R + + L L K IK +P S++ LV N V+ + + KAV DLG+ SY +H+LT Sbjct: 8 IYKLLNYPNTTVYRIFNAWEIKGKFCCKAHSMRSDRIRTFRFLEGLRKSIKASPGTSLSRLVKNXGVSKQLVSKAVNEDLGYRSYRMVKQHILT 101
BLAST of EMLSAG00000012106 vs. nr
Match: gi|961376506|gb|ALS04997.1| (hypothetical protein [Calanus sinicus]) HSP 1 Score: 107.842 bits (268), Expect = 1.605e-25 Identity = 48/83 (57.83%), Postives = 56/83 (67.47%), Query Frame = 0 Query: 158 APVPRCSPFIIINKLAEFSNVLSDSNPYFPVPPCEYGGPGNAIRYGDYEXVFVLARPDLIPRHNFYELIWFMKYGASRFVRYI 240 APVPRCSP IIINK+ E ++ SD NPYFPV CEYGGP AI GD+ VF+L P IP HN YEL+W +K G R R + Sbjct: 20 APVPRCSPLIIINKVPESMSLTSDMNPYFPVAECEYGGPMQAILAGDFNSVFILDEPGKIPLHNLYELVWIVKKGWPRLQRIL 102
BLAST of EMLSAG00000012106 vs. nr
Match: gi|961100537|ref|XP_014775258.1| (PREDICTED: uncharacterized protein LOC106872695 [Octopus bimaculoides]) HSP 1 Score: 76.6406 bits (187), Expect = 1.578e-12 Identity = 46/117 (39.32%), Postives = 66/117 (56.41%), Query Frame = 0 Query: 1 MSEQEAKRQPISDILEAVVEVARILDIVKRPRSLVFKVANMKKNGEYLSKKAGSGRXNLKKDLEILSNLEKKIKDNPTKSMNHLVNNFFVAARTIRKAVKGDLGFFSYTRTPRHLLT 117 +S +E+K Q + D+L A+V I IV V+ V N + +++K+GSG N K+ + L+ K+ +PTKSM + V +TIR AVK DL SYTRTP+HLLT Sbjct: 16 VSNKESKCQRVCDLLNALVTPKEISRIVGVSIKTVYNVKNRMAMSKTITRKSGSGGINKKRTKAFIKALKSKVLKDPTKSMRKMAIELEVDNKTIRNAVKYDLRLKSYTRTPKHLLT 132
BLAST of EMLSAG00000012106 vs. nr
Match: gi|961127171|ref|XP_014784635.1| (PREDICTED: uncharacterized protein LOC106879525 [Octopus bimaculoides]) HSP 1 Score: 66.6254 bits (161), Expect = 2.478e-9 Identity = 43/114 (37.72%), Postives = 60/114 (52.63%), Query Frame = 0 Query: 4 QEAKRQPISDILEAVVEVARILDIVKRPRSLVFKVANMKKNGEYLSKKAGSGRXNLKKDLEILSNLEKKIKDNPTKSMNHLVNNFFVAARTIRKAVKGDLGFFSYTRTPRHLLT 117 QE+K Q + D+L +V I IV V+ V N + +++K+GSG N K+ + L+ KI +P KSM + V +TIR AVK DL S TRT +HLLT Sbjct: 32 QESKCQRVCDLLNGLVTPKEISRIVGMSIKTVYNVKNRMAMSKTITRKSGSGGINKKRTKAFIKALKSKILKDPAKSMRKMAIELEVDNKTIRNAVKYDLRLKSNTRTRKHLLT 145
BLAST of EMLSAG00000012106 vs. nr
Match: gi|961119645|ref|XP_014782038.1| (PREDICTED: uncharacterized protein LOC106877607 [Octopus bimaculoides]) HSP 1 Score: 60.077 bits (144), Expect = 5.421e-8 Identity = 34/69 (49.28%), Postives = 43/69 (62.32%), Query Frame = 0 Query: 49 SKKAGSGRXNLKKDLEILSNLEKKIKDNPTKSMNHLVNNFFVAARTIRKAVKGDLGFFSYTRTPRHLLT 117 ++K+GSG N K+ L L+ KI +PTKSM + V +TIR AVK DL SYTRTP+HLLT Sbjct: 8 TRKSGSGGINKKRTKVFLKALKSKILKDPTKSMRKMAIELEVDNKTIRNAVKYDLRLESYTRTPKHLLT 76
BLAST of EMLSAG00000012106 vs. Tigriopus kingsejongenis genes
Match: maker-scaffold1073_size64583-snap-gene-0.7 (protein:Tk02398 transcript:maker-scaffold1073_size64583-snap-gene-0.7-mRNA-1 annotation:"unnamed protein product") HSP 1 Score: 133.265 bits (334), Expect = 1.142e-35 Identity = 60/117 (51.28%), Postives = 77/117 (65.81%), Query Frame = 0 Query: 124 TFFNTKVTDSALIEMTKLYQLSLFYFLSILHLVPAPVPRCSPFIIINKLAEFSNVLSDSNPYFPVPPCEYGGPGNAIRYGDYEXVFVLARPDLIPRHNFYELIWFMKYGASRFVRYI 240 T ++T SA++ + ++ L ++ VPAPVPRCSP IIINKLAE +N+LSDSNPYFPVPPCEYGG A+ GD++ V + A P IP HNFYE IW +K G R R + Sbjct: 94 TLYHTHT--SAMLNSKSILTSTVILVLELIQPVPAPVPRCSPLIIINKLAESTNILSDSNPYFPVPPCEYGGWTEALAEGDFQAVSIFAEPQKIPLHNFYEFIWLLKTGGPRMFRML 208
BLAST of EMLSAG00000012106 vs. Tigriopus kingsejongenis genes
Match: snap_masked-scaffold238_size242079-processed-gene-0.0 (protein:Tk10917 transcript:snap_masked-scaffold238_size242079-processed-gene-0.0-mRNA-1 annotation:"calcineurin b homologous protein 1") HSP 1 Score: 107.842 bits (268), Expect = 1.483e-27 Identity = 60/119 (50.42%), Postives = 75/119 (63.03%), Query Frame = 0 Query: 1 MSEQEAKRQPISDILEAVVEVARILDIVKRPRSLVFKVANMKKNGEYLSKKAGSGRXNLKKDLEILSNLEKKIKDNPTKSMNHLVNNFFVAARTIRKAVKGDLGFFSYTRTPRHLLTKK 119 MSEQEAKRQ +SD+L+A V+ RI +IV V + KK G + +K GSG LK++ L +LE KIK +PT SM L + F V TIR+AV DLGF SY RTPRHLLT + Sbjct: 79 MSEQEAKRQRVSDLLDAEVDPKRISEIVGVSERTVRNIRAAKKIGNGVERKEGSGGNGLKRNEAFLKSLEAKIKADPTASMRCLADEFDVDEITIRRAVHDDLGFTSYVRTPRHLLTDR 197
BLAST of EMLSAG00000012106 vs. Tigriopus kingsejongenis genes
Match: maker-scaffold81_size397536-snap-gene-2.18 (protein:Tk08533 transcript:maker-scaffold81_size397536-snap-gene-2.18-mRNA-1 annotation:"multidrug resistance-associated protein 1 isoform x4") HSP 1 Score: 107.071 bits (266), Expect = 2.601e-26 Identity = 59/119 (49.58%), Postives = 75/119 (63.03%), Query Frame = 0 Query: 1 MSEQEAKRQPISDILEAVVEVARILDIVKRPRSLVFKVANMKKNGEYLSKKAGSGRXNLKKDLEILSNLEKKIKDNPTKSMNHLVNNFFVAARTIRKAVKGDLGFFSYTRTPRHLLTKK 119 MSEQEAKRQ +SD+L+A ++ RI +IV V + KK G + +K GSG LK++ L +LE KIK +PT SM L + F V TIR+AV DLGF SY RTPRHLLT + Sbjct: 1536 MSEQEAKRQRVSDLLDAELDPKRISEIVGVSERTVRNIRAAKKIGNGVERKEGSGGNGLKRNEAFLKSLEAKIKADPTASMLCLADEFDVDEITIRRAVHDDLGFTSYVRTPRHLLTDR 1654
BLAST of EMLSAG00000012106 vs. Tigriopus kingsejongenis genes
Match: maker-scaffold48_size466083-snap-gene-2.9 (protein:Tk05978 transcript:maker-scaffold48_size466083-snap-gene-2.9-mRNA-1 annotation:"hypothetical protein TRIADDRAFT_50060") HSP 1 Score: 83.5741 bits (205), Expect = 2.424e-18 Identity = 49/113 (43.36%), Postives = 65/113 (57.52%), Query Frame = 0 Query: 1 MSEQEAKRQPISDILEAVVEVARILDIVKRPRSLVFKVANMKKNGEYLSKKAGSGRXNLKKDLEILSNLEKKIKDNPTKSMNHLVNNFFVAARTIRKAVKGDLGFFSYTRTPR 113 MSEQEAKRQ +SD+L+A V+ RI +IV V + KK G + +K GSG LK+++ L +LE KIK +PT SM L + F V TI++AV DL PR Sbjct: 17 MSEQEAKRQRVSDLLDAEVDPKRISEIVGVSERTVRNIRAAKKIGNGVERKEGSGGNGLKRNVAFLKSLEAKIKADPTASMRRLADEFDVDEITIKRAVHDDLDVAQAPPLPR 129
BLAST of EMLSAG00000012106 vs. Tigriopus kingsejongenis genes
Match: snap_masked-scaffold56_size446035-processed-gene-2.0 (protein:Tk11493 transcript:snap_masked-scaffold56_size446035-processed-gene-2.0-mRNA-1 annotation:"hypothetical protein X777_08140") HSP 1 Score: 76.2554 bits (186), Expect = 1.703e-16 Identity = 49/116 (42.24%), Postives = 60/116 (51.72%), Query Frame = 0 Query: 2 SEQEAKRQPISDILEAVVEVARILDIVKRPRSLVFKVANMKKNGEYLSKKAGSGRXNLKKDLEILSNLEKKIKDNPTKSMNHLVNNFFVAARTIRKAVKGDLGFFSYTRTPRHLLT 117 SE+ K I ++L A + I IV V+ V K NG + +K GSG LK+D + L L KIK +PT SM L F V TIRKA+ DL SY R PRHLLT Sbjct: 39 SERWKKCIQIGNLLGAQIYKKEIAGIVGVFLPTVYNVLKSKTNGNGIERKEGSGGNGLKRDEDFLDVLGAKIKLDPTISMRRLAKEFNVVESTIRKAIYDDLSLTSYVRVPRHLLT 154
BLAST of EMLSAG00000012106 vs. Tigriopus kingsejongenis genes
Match: maker-scaffold176_size284796-snap-gene-1.24 (protein:Tk06862 transcript:maker-scaffold176_size284796-snap-gene-1.24-mRNA-1 annotation:"vascular endothelial growth factor a-a") HSP 1 Score: 74.7146 bits (182), Expect = 3.906e-16 Identity = 44/98 (44.90%), Postives = 57/98 (58.16%), Query Frame = 0 Query: 1 MSEQEAKRQPISDILEAVVEVARILDIVKRPRSLVFKVANMKKNGEYLSKKAGSGRXNLKKDLEILSNLEKKIKDNPTKSMNHLVNNFFVAARTIRKA 98 MSEQEAKRQ + D+L+A V+ RI +IV V + KK G + +K GSG LK + L +LE KIK +PT SM L + F V TIR+A Sbjct: 1 MSEQEAKRQRVPDLLDAEVDPKRISEIVGVSERTVRNIRAAKKIGNGVERKEGSGGNGLKGNEAFLKSLEAKIKADPTASMRRLADEFDVDEITIRRA 98
BLAST of EMLSAG00000012106 vs. Tigriopus kingsejongenis genes
Match: maker-scaffold348_size200312-snap-gene-0.28 (protein:Tk10904 transcript:maker-scaffold348_size200312-snap-gene-0.28-mRNA-1 annotation:"glycoprotein-n-acetylgalactosamine 3-beta-galactosyltransferase 1-like isoform x3") HSP 1 Score: 65.0846 bits (157), Expect = 3.595e-12 Identity = 38/118 (32.20%), Postives = 61/118 (51.69%), Query Frame = 0 Query: 2 SEQEAKRQPISDILEAVVEVARILDIVKRPRSLVFKVANMKKNGEYLSKKAGSGRXNLKKDLEILSNLEKKIKDNPTKSMNHLVNNFFVAARTIRKAVKGDLGFFSYTRTPRHLLTKK 119 + QE +R+ I+D+ A + A I+ + P+ V+ V K+G + K K+ L+ L++ IK NP S+ ++ +T+ KA+K DLG SY R RHLLT+K Sbjct: 435 TRQELRRKVIADLHAAGNDAATIVKVTNYPKRTVYDVVKRLKDGRGIEHKPCGPHKAKKRTKTFLAGLKRSIKANPAVSIRAHAARRGLSRKTMAKAIKEDLGLTSYVRGRRHLLTEK 552
BLAST of EMLSAG00000012106 vs. Tigriopus kingsejongenis genes
Match: maker-scaffold572_size133628-snap-gene-0.11 (protein:Tk01141 transcript:maker-scaffold572_size133628-snap-gene-0.11-mRNA-1 annotation:"similar to H28G03.4") HSP 1 Score: 63.929 bits (154), Expect = 6.748e-12 Identity = 39/118 (33.05%), Postives = 61/118 (51.69%), Query Frame = 0 Query: 2 SEQEAKRQPISDILEAVVEVARILDIVKRPRSLVFKVANMKKNGEYLSKKAGSGRXNLKKDLEILSNLEKKIKDNPTKSMNHLVNNFFVAARTIRKAVKGDLGFFSYTRTPRHLLTKK 119 S QE +R+ I+D+ A + A I+ + P+ V+ V K+G + K K+ L+ L++ IK NP S+ ++ +T+ KA+K DLG SY R RHLLT+K Sbjct: 60 SRQELRRKVIADLHAAGNDAATIVKVTNYPKRTVYDVVKRLKDGRGIEHKPCGPHKAKKRTKTFLAGLKRSIKANPAVSIRAHAARRGLSRKTMAKAIKEDLGLTSYVRGRRHLLTEK 177
BLAST of EMLSAG00000012106 vs. Tigriopus kingsejongenis genes
Match: snap_masked-scaffold1116_size61586-processed-gene-0.2 (protein:Tk12132 transcript:snap_masked-scaffold1116_size61586-processed-gene-0.2-mRNA-1 annotation:"hypothetical protein DAPPUDRAFT_305508") HSP 1 Score: 55.8398 bits (133), Expect = 3.537e-9 Identity = 27/76 (35.53%), Postives = 47/76 (61.84%), Query Frame = 0 Query: 6 AKRQPISDILEAVVEVARILDIVKRPRSLVFKVANMKKNGEYLSKKAGSGRXNLKKDLEILSNLEKKIKDNPTKSM 81 +K+Q ++ +L A V VA I+DIV +++V+ + + G+ L ++ GSG NLK L++L KI +PT+S+ Sbjct: 530 SKKQRVAHLLRAHVPVAEIVDIVGVKKTMVYDTKKLLEAGDSLERRPGSGGHNLKMTDNFLADLAAKIDADPTRSI 605
BLAST of EMLSAG00000012106 vs. Tigriopus kingsejongenis genes
Match: maker-scaffold58_size443543-snap-gene-0.8 (protein:Tk00687 transcript:maker-scaffold58_size443543-snap-gene-0.8-mRNA-1 annotation:"hypothetical protein BRAFLDRAFT_61918") HSP 1 Score: 55.0694 bits (131), Expect = 7.023e-9 Identity = 30/76 (39.47%), Postives = 43/76 (56.58%), Query Frame = 0 Query: 42 KKNGEYLSKKAGSGRXNLKKDLEILSNLEKKIKDNPTKSMNHLVNNFFVAARTIRKAVKGDLGFFSYTRTPRHLLT 117 +K+G+ +K GSG N K+ +++L+ +I +PT SM + TIRKAV DLG S+ R PR LLT Sbjct: 685 RKDGKSAAKAKGSGGHNKKRTDAFVNSLKDRIDADPTISMRRHAMDLNGLTGTIRKAVHDDLGLKSFVRVPRQLLT 760 The following BLAST results are available for this feature:
BLAST of EMLSAG00000012106 vs. GO
Analysis Date: 2014-04-02 (Blast vs. GO) Total hits: 0
BLAST of EMLSAG00000012106 vs. C. finmarchicus
Analysis Date: 2014-05-09 (TblastN vs C. finmarchicus TSA) Total hits: 10
BLAST of EMLSAG00000012106 vs. L. salmonis peptides
Analysis Date: 2014-05-10 (Blastp vs. self) Total hits: 3
BLAST of EMLSAG00000012106 vs. SwissProt
Analysis Date: 2017-02-10 (Blastp vs. SwissProt) Total hits: 0
BLAST of EMLSAG00000012106 vs. Select Arthropod Genomes
Analysis Date: 2017-02-20 (Blastp vs. Selected Arthropods) Total hits: 0
BLAST of EMLSAG00000012106 vs. nr
Analysis Date: 2017-02-20 (Blastp vs. NR (2/2017)) Total hits: 4
BLAST of EMLSAG00000012106 vs. Tigriopus kingsejongenis genes
Analysis Date: 2018-04-18 (Blastp vs. Tigriopus kingsejongensis proteins) Total hits: 18
Pagesback to topAlignments
The following features are aligned
Analyses
This gene is derived from or has results from the following analyses
Properties
Cross References
External references for this gene
Relationships
The following mRNA feature(s) are a part of this gene:
Sequences
The following sequences are available for this feature:
gene from alignment at LSalAtl2s868:259044..273007+ Legend: mRNA Hold the cursor over a type above to highlight its positions in the sequence below.>EMLSAG00000012106-694872 ID=EMLSAG00000012106-694872|Name=EMLSAG00000012106|organism=Lepeophtheirus salmonis|type=gene|length=13964bp|location=Sequence derived from alignment at LSalAtl2s868:259044..273007+ (Lepeophtheirus salmonis)back to top Add to Basket
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