EMLSAG00000004889, EMLSAG00000004889-687655 (gene) Lepeophtheirus salmonis

Overview
NameEMLSAG00000004889
Unique NameEMLSAG00000004889-687655
Typegene
OrganismLepeophtheirus salmonis (salmon louse)
Associated RNAi Experiments

Nothing found

Homology
[Close]
BLAST of EMLSAG00000004889 vs. C. finmarchicus
Match: gi|592848675|gb|GAXK01108869.1| (TSA: Calanus finmarchicus comp296545_c0_seq2 transcribed RNA sequence)

HSP 1 Score: 98.2117 bits (243), Expect = 9.326e-26
Identity = 51/80 (63.75%), Postives = 59/80 (73.75%), Query Frame = 0 
Query:   14 KAPSLVQNCGCQCSSLTFADSYGRIQGNCRSADYTGARWCYIPFSH--TCNDAQYSSRF-RNQWSYEACATP---RCGGL 87
            KA S   NC CQCSSLTF D YGRIQGNC SAD+TGARWCY+  +H  +C D  +S+RF +N WSYEACATP   +CG L
Sbjct:  196 KAASPYTNCDCQCSSLTFQDKYGRIQGNCNSADHTGARWCYVDSAHHSSCQDLHHSARFPQNPWSYEACATPDRHQCGHL 435
[Close]
BLAST of EMLSAG00000004889 vs. C. finmarchicus
Match: gi|592848676|gb|GAXK01108868.1| (TSA: Calanus finmarchicus comp296545_c0_seq1 transcribed RNA sequence)

HSP 1 Score: 98.9821 bits (245), Expect = 3.052e-25
Identity = 52/80 (65.00%), Postives = 60/80 (75.00%), Query Frame = 0 
Query:   14 KAPSLVQNCGCQCSSLTFADSYGRIQGNCRSADYTGARWCYIPFSH--TCNDAQYSSRF-RNQWSYEACATP---RCGGL 87
            KA S   NC CQCSSLTF D YGRIQGNC SAD+TGARWCY+  +H  +C D Q+S+RF +N WSYEACATP   +CG L
Sbjct:  512 KAASPYTNCDCQCSSLTFQDKYGRIQGNCNSADHTGARWCYVDSAHHSSCQDLQHSARFPQNPWSYEACATPDRHQCGHL 751

HSP 2 Score: 95.1301 bits (235), Expect = 6.105e-24
Identity = 50/80 (62.50%), Postives = 56/80 (70.00%), Query Frame = 0 
Query:   14 KAPSLVQNCGCQCSSLTFADSYGRIQGNCRSADYTGARWCYIPFSH--TCNDAQYSSRF-RNQWSYEACATP---RCGGL 87
            KA S   NC CQCSSL F D YGRIQGNC SAD+TGARWCY+  +H  +C D  +S RF  N WSYEACATP   +CG L
Sbjct:  115 KAASPYTNCDCQCSSLNFQDKYGRIQGNCNSADHTGARWCYVDSAHHSSCQDLHHSVRFPNNPWSYEACATPDRHQCGHL 354
[Close]
BLAST of EMLSAG00000004889 vs. C. finmarchicus
Match: gi|592906544|gb|GAXK01051831.1| (TSA: Calanus finmarchicus comp28981_c1_seq1 transcribed RNA sequence)

HSP 1 Score: 92.8189 bits (229), Expect = 1.930e-23
Identity = 45/73 (61.64%), Postives = 53/73 (72.60%), Query Frame = 0 
Query:   12 ILKAPSLVQNCGCQCSSLTFADSYGRIQGNCRSADYTGARWCYIPFSH-TCNDAQYSSRF-RNQWSYEACATP 82
            + KA S   N GCQCSSLTF DS G IQGNC+S D+TGA+WCY+   H +C D  +S+RF  N WSYEACATP
Sbjct:  383 VEKAASPYTNIGCQCSSLTFIDSSGHIQGNCKSVDHTGAQWCYVDHLHSSCQDLVHSARFPNNPWSYEACATP 601
[Close]
BLAST of EMLSAG00000004889 vs. C. finmarchicus
Match: gi|592953585|gb|GAXK01004968.1| (TSA: Calanus finmarchicus comp348412_c0_seq1 transcribed RNA sequence)

HSP 1 Score: 89.7373 bits (221), Expect = 6.285e-23
Identity = 45/80 (56.25%), Postives = 56/80 (70.00%), Query Frame = 0 
Query:    7 AQNGIIL-KAPSLVQNCGCQCSSLTFADSYGRIQGNCRSADYTGARWCYIPFSH--TCNDAQYSSRF-RNQWSYEACATP 82
            A+N  +L +A S   NCGCQCSSLTF D YG++ GNC+S D  GA+WCYI  +H  +C D Q S++F  N WSY ACATP
Sbjct:  101 ARNATLLTRAASTYVNCGCQCSSLTFRDEYGKVHGNCKSVDDKGAQWCYISSTHYSSCEDLQLSAKFPNNPWSYTACATP 340
[Close]
BLAST of EMLSAG00000004889 vs. C. finmarchicus
Match: gi|592932381|gb|GAXK01026172.1| (TSA: Calanus finmarchicus comp18158_c1_seq2 transcribed RNA sequence)

HSP 1 Score: 91.2781 bits (225), Expect = 2.102e-22
Identity = 48/86 (55.81%), Postives = 57/86 (66.28%), Query Frame = 0 
Query:    2 LTLSSAQNGIILKAPSLVQNCGCQCSSLTFADSYGRIQGNCRSADYTGARWCYIPFSH-TCNDAQYSSRF-RNQWSYEACATPRCG 85
            + LS+  +  + KA S   NCGCQCSSLTF DS   IQGNC++ D TGA+WCY+  SH +C D   S RF  N WSYEACATP  G
Sbjct:   70 MALSTTYSKTLNKASSPYTNCGCQCSSLTFRDSANIIQGNCKTVDSTGAQWCYVDSSHSSCQDLVPSQRFPHNPWSYEACATPALG 327
[Close]
BLAST of EMLSAG00000004889 vs. C. finmarchicus
Match: gi|592932378|gb|GAXK01026175.1| (TSA: Calanus finmarchicus comp18158_c1_seq5 transcribed RNA sequence)

HSP 1 Score: 86.2705 bits (212), Expect = 7.708e-22
Identity = 46/82 (56.10%), Postives = 55/82 (67.07%), Query Frame = 0 
Query:    2 LTLSSAQNGIILKAPSLVQNCGCQCSSLTFADSYGRIQGNCRSADYTGARWCYIPFSH-TCNDAQYSSRF-RNQWSYEACAT 81
            + LS+  +  + KA S   NCGCQCSSLTF DS   IQGNC++ D TGA+WCY+  SH +C D   S RF  N WSYEACAT
Sbjct:   70 MALSTTYSKTLNKASSPYTNCGCQCSSLTFRDSANIIQGNCKTVDSTGAQWCYVDSSHSSCQDLVPSQRFPHNPWSYEACAT 315
[Close]
BLAST of EMLSAG00000004889 vs. C. finmarchicus
Match: gi|592932379|gb|GAXK01026174.1| (TSA: Calanus finmarchicus comp18158_c1_seq4 transcribed RNA sequence)

HSP 1 Score: 87.8113 bits (216), Expect = 9.442e-22
Identity = 44/74 (59.46%), Postives = 51/74 (68.92%), Query Frame = 0 
Query:   14 KAPSLVQNCGCQCSSLTFADSYGRIQGNCRSADYTGARWCYIP-FSHTCNDAQYSSRF-RNQWSYEACATPRCG 85
            KA S   NCGCQCSSLTF D+ G +QGNC++ D TGA+WCY+   S +C D   S RF  N WSYEACATP  G
Sbjct:  109 KAASPFTNCGCQCSSLTFRDTSGTVQGNCKTVDGTGAQWCYVDSSSSSCQDLVPSERFPHNPWSYEACATPDLG 330
[Close]
BLAST of EMLSAG00000004889 vs. C. finmarchicus
Match: gi|592956545|gb|GAXK01002011.1| (TSA: Calanus finmarchicus comp90527_c0_seq22 transcribed RNA sequence)

HSP 1 Score: 85.8853 bits (211), Expect = 9.245e-21
Identity = 44/86 (51.16%), Postives = 56/86 (65.12%), Query Frame = 0 
Query:    1 MLTLSSAQNGIILKAPSLVQNCGCQCSSLTFADSYGRIQGNCRSADYTGARWCYIPFSHTCNDAQYSSRF-RNQWSYEACATPRCG 85
            +L+ S A  G +    +    CGCQCSSL + D YG +QGNCRSAD+T A+WCY+    TC+D   S+R  RN WSY+ACATP  G
Sbjct:  171 ILSSSLAGRGSLKLRGAAAPACGCQCSSLVWQDKYGDVQGNCRSADHTKAKWCYVKEGSTCSDLVPSARHPRNPWSYQACATPSQG 428
[Close]
BLAST of EMLSAG00000004889 vs. C. finmarchicus
Match: gi|592956547|gb|GAXK01002009.1| (TSA: Calanus finmarchicus comp90527_c0_seq20 transcribed RNA sequence)

HSP 1 Score: 86.2705 bits (212), Expect = 9.293e-21
Identity = 44/86 (51.16%), Postives = 56/86 (65.12%), Query Frame = 0 
Query:    1 MLTLSSAQNGIILKAPSLVQNCGCQCSSLTFADSYGRIQGNCRSADYTGARWCYIPFSHTCNDAQYSSRF-RNQWSYEACATPRCG 85
            +L+ S A  G +    +    CGCQCSSL + D YG +QGNCRSAD+T A+WCY+    TC+D   S+R  RN WSY+ACATP  G
Sbjct:  171 ILSSSLAGRGSLKLRGAAAPACGCQCSSLVWQDKYGDVQGNCRSADHTKAKWCYVKEGSTCSDLVPSARHPRNPWSYQACATPSQG 428
[Close]
BLAST of EMLSAG00000004889 vs. C. finmarchicus
Match: gi|592956546|gb|GAXK01002010.1| (TSA: Calanus finmarchicus comp90527_c0_seq21 transcribed RNA sequence)

HSP 1 Score: 85.8853 bits (211), Expect = 1.253e-20
Identity = 43/83 (51.81%), Postives = 55/83 (66.27%), Query Frame = 0 
Query:    1 MLTLSSAQNGIILKAPSLVQNCGCQCSSLTFADSYGRIQGNCRSADYTGARWCYIPFSHTCNDAQYSSRF-RNQWSYEACATP 82
            +L+ S A  G +    +    CGCQCSSL + D YG +QGNCRSAD+T A+WCY+    TC+D   S+R  RN WSY+ACATP
Sbjct:  171 ILSSSLAGRGSLKLRGAAAPACGCQCSSLVWQDKYGDVQGNCRSADHTKAKWCYVKEGSTCSDLVPSARHPRNPWSYQACATP 419
[Close]
BLAST of EMLSAG00000004889 vs. L. salmonis peptides
Match: EMLSAP00000004889 (pep:novel supercontig:LSalAtl2s:LSalAtl2s257:179358:180381:1 gene:EMLSAG00000004889 transcript:EMLSAT00000004889 description:"maker-LSalAtl2s257-augustus-gene-1.12")

HSP 1 Score: 187.963 bits (476), Expect = 6.724e-63
Identity = 90/90 (100.00%), Postives = 90/90 (100.00%), Query Frame = 0 
Query:    1 MLTLSSAQNGIILKAPSLVQNCGCQCSSLTFADSYGRIQGNCRSADYTGARWCYIPFSHTCNDAQYSSRFRNQWSYEACATPRCGGLYTK 90
            MLTLSSAQNGIILKAPSLVQNCGCQCSSLTFADSYGRIQGNCRSADYTGARWCYIPFSHTCNDAQYSSRFRNQWSYEACATPRCGGLYTK
Sbjct:    1 MLTLSSAQNGIILKAPSLVQNCGCQCSSLTFADSYGRIQGNCRSADYTGARWCYIPFSHTCNDAQYSSRFRNQWSYEACATPRCGGLYTK 90
[Close]
BLAST of EMLSAG00000004889 vs. L. salmonis peptides
Match: EMLSAP00000002890 (pep:novel supercontig:LSalAtl2s:LSalAtl2s166:445712:450389:1 gene:EMLSAG00000002890 transcript:EMLSAT00000002890 description:"maker-LSalAtl2s166-augustus-gene-4.9")

HSP 1 Score: 105.145 bits (261), Expect = 8.074e-30
Identity = 49/84 (58.33%), Postives = 62/84 (73.81%), Query Frame = 0 
Query:    1 MLTLSSAQNGIILKAPSLVQNCGCQCSSLTFADSYGRIQGNCRSADYTGARWCYIPFSHTCNDAQYSSRFRNQWSYEACATPRC 84
            ML L+  Q    L++PSL QNCGCQC+S TF+D  G  QGNC S+D+TG RWCY+ + +TC+DA  S R+  QWSYEAC+TPRC
Sbjct:   17 MLNLTQGQ----LRSPSLYQNCGCQCNSYTFSDIKGYTQGNCFSSDFTGGRWCYVDYGNTCHDAVPSLRYNGQWSYEACSTPRC 96
[Close]
BLAST of EMLSAG00000004889 vs. L. salmonis peptides
Match: EMLSAP00000007123 (pep:novel supercontig:LSalAtl2s:LSalAtl2s401:84241:84844:-1 gene:EMLSAG00000007123 transcript:EMLSAT00000007123 description:"maker-LSalAtl2s401-augustus-gene-0.14")

HSP 1 Score: 98.9821 bits (245), Expect = 3.523e-27
Identity = 52/89 (58.43%), Postives = 60/89 (67.42%), Query Frame = 0 
Query:    1 MLTLSSAQNGIILKAPSLVQNCGCQCSSLTFADSYGRIQGNCRSADYTGARWCYIPFSHTCNDAQYSSR-----FRNQWSYEACATPRC 84
            ++ L+SAQ+ I LKAPSL  NCGCQCS+  F D  G  QGNC SAD TGA+WCY+   HTC D + S R      R Q SYEACATPRC
Sbjct:   11 VVALTSAQD-ITLKAPSLAVNCGCQCSNYIFRDLRGITQGNCNSADRTGAKWCYVDRGHTCQDTRGSGRNDQFGRRRQISYEACATPRC 98
[Close]
BLAST of EMLSAG00000004889 vs. L. salmonis peptides
Match: EMLSAP00000007122 (pep:novel supercontig:LSalAtl2s:LSalAtl2s401:64891:74089:-1 gene:EMLSAG00000007122 transcript:EMLSAT00000007122 description:"maker-LSalAtl2s401-augustus-gene-0.13")

HSP 1 Score: 98.2117 bits (243), Expect = 9.681e-27
Identity = 52/89 (58.43%), Postives = 60/89 (67.42%), Query Frame = 0 
Query:    1 MLTLSSAQNGIILKAPSLVQNCGCQCSSLTFADSYGRIQGNCRSADYTGARWCYIPFSHTCNDAQYSSR-----FRNQWSYEACATPRC 84
            ++ L+SAQ+ I LKAPSL  NCGCQCS+  F D  G  QGNC SAD TGA+WCY+   HTC D + S R      R Q SYEACATPRC
Sbjct:  109 VVALTSAQD-ITLKAPSLAVNCGCQCSNYIFRDLRGITQGNCNSADRTGAKWCYVDRGHTCQDTRGSGRKDQFGRRRQISYEACATPRC 196

HSP 2 Score: 84.7297 bits (208), Expect = 1.108e-21
Identity = 46/83 (55.42%), Postives = 54/83 (65.06%), Query Frame = 0 
Query:    1 MLTLSSAQNGIILKAPSLVQNCGCQCSSLTFADSYGRIQGNCRSADYTGARWCYIPFSHTCNDAQYSSR-----FRNQWSYEA 78
            ++ L+SAQ+ I LKAPSL  NCGCQCS+  F D  G  QGNC SAD TGA+WCY+   HTC D + S R      R Q SYEA
Sbjct:   11 VVALTSAQD-ITLKAPSLAVNCGCQCSNYIFRDLRGITQGNCNSADQTGAKWCYVDRGHTCQDTRGSGRRDQFGRRRQISYEA 92
[Close]
BLAST of EMLSAG00000004889 vs. L. salmonis peptides
Match: EMLSAP00000012322 (pep:novel supercontig:LSalAtl2s:LSalAtl2s8:1311290:1311781:1 gene:EMLSAG00000012322 transcript:EMLSAT00000012322 description:"augustus_masked-LSalAtl2s8-processed-gene-15.4")

HSP 1 Score: 95.5153 bits (236), Expect = 5.402e-26
Identity = 46/82 (56.10%), Postives = 56/82 (68.29%), Query Frame = 0 
Query:   10 GIILKAPSLVQNCGCQCSSLTFADSYGRIQGNCRSADYTGARWCYIPFSHTCNDAQYSSRFRNQ-WSYEACATPRCGGLYTK 90
            GI LKAPSL  NCGCQC S  F D +G+ QGNCRS D +GARWC++   +TC D  +   FR +  S EACATPRCG ++ K
Sbjct:   19 GITLKAPSLAINCGCQCDSFIFRDRFGQTQGNCRSTDRSGARWCFVRPGNTCTDTSF---FRGRTISNEACATPRCGNIFPK 97
[Close]
BLAST of EMLSAG00000004889 vs. L. salmonis peptides
Match: EMLSAP00000001015 (pep:novel supercontig:LSalAtl2s:LSalAtl2s116:786764:792986:-1 gene:EMLSAG00000001015 transcript:EMLSAT00000001015 description:"maker-LSalAtl2s116-augustus-gene-8.13")

HSP 1 Score: 96.6709 bits (239), Expect = 5.640e-26
Identity = 51/89 (57.30%), Postives = 57/89 (64.04%), Query Frame = 0 
Query:    1 MLTLSSAQNGIILKAPSLVQNCGCQCSSLTFADSYGRIQGNCRSADYTGARWCYIPFSHTCNDAQYSSRFRN-----QWSYEACATPRC 84
             +   SAQ+ I LKAPSL  NCGCQCS+  F D  G  QGNC SAD TGA+WCY+   HTC D + S R  N     Q SYEACATPRC
Sbjct:   11 FVAFGSAQD-ITLKAPSLAVNCGCQCSNYIFRDGNGITQGNCNSADRTGAKWCYVERGHTCQDTRRSXRRDNFGRLRQISYEACATPRC 98

HSP 2 Score: 47.3654 bits (111), Expect = 4.739e-8
Identity = 25/44 (56.82%), Postives = 28/44 (63.64%), Query Frame = 0 
Query:    1 MLTLSSAQNGIILKAPSLVQNCGCQCSSLTFADSYGRIQGNCRS 44
             +   SAQ+ I LKAPSL  NCGCQCS+  F D  G  QGNC S
Sbjct:  182 FVVFGSAQD-ITLKAPSLAVNCGCQCSNYIFRDGNGITQGNCNS 224
[Close]
BLAST of EMLSAG00000004889 vs. L. salmonis peptides
Match: EMLSAP00000006141 (pep:novel supercontig:LSalAtl2s:LSalAtl2s335:388935:390297:1 gene:EMLSAG00000006141 transcript:EMLSAT00000006141 description:"maker-LSalAtl2s335-snap-gene-4.14")

HSP 1 Score: 94.3597 bits (233), Expect = 2.135e-25
Identity = 47/87 (54.02%), Postives = 57/87 (65.52%), Query Frame = 0 
Query:    8 QNGIILKAPSLVQNCGCQCSSLTFADSYGRIQGNCRSADYTGARWCYIPFSHTCNDAQYSSRFRN-----QWSYEACATPRCGGLYT 89
            +N IILKA S   NCGCQC++  F D YGR QGNC +AD +GA+WCY+   +TCND  YSSR        + S EACATP C G +T
Sbjct:   19 KNDIILKAASSRTNCGCQCNNYIFKDKYGRTQGNCNTADKSGAKWCYVSRGNTCNDVTYSSRKDERGQPRRISNEACATPVCNGRFT 105
[Close]
BLAST of EMLSAG00000004889 vs. L. salmonis peptides
Match: EMLSAP00000007117 (pep:novel supercontig:LSalAtl2s:LSalAtl2s401:30551:49956:-1 gene:EMLSAG00000007117 transcript:EMLSAT00000007117 description:"maker-LSalAtl2s401-augustus-gene-0.12")

HSP 1 Score: 94.7449 bits (234), Expect = 5.134e-25
Identity = 51/89 (57.30%), Postives = 59/89 (66.29%), Query Frame = 0 
Query:    1 MLTLSSAQNGIILKAPSLVQNCGCQCSSLTFADSYGRIQGNCRSADYTGARWCYIPFSHTCNDAQYSSR-----FRNQWSYEACATPRC 84
            ++ L+SAQ+ I LKAPSL  NCGCQCS+  F D  G  QGNC SAD TGA+WCY+   HTC D   S+R      R Q SYEACATP C
Sbjct:   66 VVALTSAQD-ITLKAPSLAVNCGCQCSNYIFRDLRGITQGNCNSADQTGAKWCYVDRGHTCQDTIGSARNDQFGRRRQISYEACATPNC 153

HSP 2 Score: 90.5077 bits (223), Expect = 1.597e-23
Identity = 48/81 (59.26%), Postives = 52/81 (64.20%), Query Frame = 0 
Query:   11 IILKAPSLVQNCGCQCSSLTFADSYGRIQGNCRSADYTGARWCYIPFSHTCNDAQYSSR-----FRNQWSYEACATPRCGG 86
            I LKAPSL  NCGCQCS   F D  G  QGNC SAD TGA+WCY+   +TC   + S R      R Q SYEACATPRCGG
Sbjct:  155 ITLKAPSLAVNCGCQCSIYIFQDVRGITQGNCNSADQTGAKWCYVNRGYTCQYTRGSGRNYQFGRRRQISYEACATPRCGG 235

HSP 3 Score: 51.2174 bits (121), Expect = 2.345e-9
Identity = 27/45 (60.00%), Postives = 32/45 (71.11%), Query Frame = 0 
Query:    1 MLTLSSAQNGIILKAPSLVQNCGCQCSSLTFADSYGRIQGNCRSA 45
            ++ L+SAQ+ I LKAPSL  NCGCQCS+  F D  G  QGNC SA
Sbjct:   11 VVVLASAQD-ITLKAPSLAVNCGCQCSNYIFQDVRGITQGNCNSA 54
[Close]
BLAST of EMLSAG00000004889 vs. L. salmonis peptides
Match: EMLSAP00000006139 (pep:novel supercontig:LSalAtl2s:LSalAtl2s335:347119:354560:1 gene:EMLSAG00000006139 transcript:EMLSAT00000006139 description:"snap_masked-LSalAtl2s335-processed-gene-4.8")

HSP 1 Score: 91.6633 bits (226), Expect = 8.035e-24
Identity = 45/87 (51.72%), Postives = 56/87 (64.37%), Query Frame = 0 
Query:    8 QNGIILKAPSLVQNCGCQCSSLTFADSYGRIQGNCRSADYTGARWCYIPFSHTCNDAQYSSRFRN-----QWSYEACATPRCGGLYT 89
            +N I LKA SL  NCGCQC++  F D YG+ QGNC + D +GA+WCY+   +TCND  YSSR        + S EACATP C G +T
Sbjct:   55 KNDIKLKAASLQTNCGCQCNNYIFLDKYGKTQGNCNTVDKSGAKWCYVSRGNTCNDVTYSSRKDERGQPRRISNEACATPVCNGRFT 141
[Close]
BLAST of EMLSAG00000004889 vs. L. salmonis peptides
Match: EMLSAP00000001011 (pep:novel supercontig:LSalAtl2s:LSalAtl2s116:644091:644652:-1 gene:EMLSAG00000001011 transcript:EMLSAT00000001011 description:"maker-LSalAtl2s116-augustus-gene-6.17")

HSP 1 Score: 83.5741 bits (205), Expect = 2.207e-21
Identity = 48/90 (53.33%), Postives = 55/90 (61.11%), Query Frame = 0 
Query:    1 MLTLSSAQNGIILKAPSLVQNCGCQCSSLTFADSYGRIQGNCRSADYTGARWCYIPFSHTCNDAQYS------SRFRNQWSYEACATPRC 84
             +   SAQ+ I LKAPSL  NCGCQCS+  F D  G  QGNC SAD TGA++CY+    T  D + S       RFR Q S EACATPRC
Sbjct:   11 FVAFGSAQD-ITLKAPSLAVNCGCQCSNYIFRDGNGITQGNCNSADRTGAKFCYVEPGXTXQDTRRSGRRDXFGRFR-QISNEACATPRC 98
[Close]
BLAST of EMLSAG00000004889 vs. nr
Match: gi|155966135|gb|ABU41022.1| (hypothetical protein [Lepeophtheirus salmonis])

HSP 1 Score: 88.5817 bits (218), Expect = 2.492e-20
Identity = 48/89 (53.93%), Postives = 56/89 (62.92%), Query Frame = 0 
Query:    1 MLTLSSAQNGIILKAPSLVQNCGCQCSSLTFADSYGRIQGNCRSADYTGARWCYIPFSHTCNDAQYSSRFRN-----QWSYEACATPRC 84
             +   SAQ+ I LKAPSL  NCGCQCS+  F D  G  QGNC SAD TGA++CY+   +TC D + S R  N     Q S EACATPRC
Sbjct:   11 FVAFGSAQD-ITLKAPSLAVNCGCQCSNYIFRDGNGITQGNCNSADRTGAKFCYVEPGNTCQDTRRSGRRDNFGRFRQISNEACATPRC 98
[Close]
BLAST of EMLSAG00000004889 vs. nr
Match: gi|155966304|gb|ABU41105.1| (hypothetical protein [Lepeophtheirus salmonis])

HSP 1 Score: 54.299 bits (129), Expect = 2.594e-7
Identity = 32/75 (42.67%), Postives = 45/75 (60.00%), Query Frame = 0 
Query:   21 NCGCQCSSLTFADSYGRIQGNCRSADYTGARWCYIPFS--HTCNDAQYSSRFRNQ-WSYEACAT-----PRCGGL 87
            +C CQC +L+F D YG+ QGNCRS  + GA+WCY+      +C D + S+R+R + +S  AC T     P C G 
Sbjct:   32 DCQCQCIALSFYDEYGQQQGNCRST-FNGAQWCYVENDGYSSCPDLKRSTRYRGKYYSNHACITLPAYSPECLGF 105
[Close]
BLAST of EMLSAG00000004889 vs. Tigriopus kingsejongenis genes
Match: maker-scaffold381_size190066-snap-gene-0.31 (protein:Tk01605 transcript:maker-scaffold381_size190066-snap-gene-0.31-mRNA-1 annotation:"hypothetical protein")

HSP 1 Score: 84.7297 bits (208), Expect = 2.434e-22
Identity = 45/80 (56.25%), Postives = 55/80 (68.75%), Query Frame = 0 
Query:   11 IILKAPSLVQNCGCQCSSLTFADSYGRIQGNCRSADYTGARWCYIPFSH--TCNDAQYS-SRFRN-----QWSYEACATP 82
            I+LKAPS + NCGCQC   T+ D+ GR+QGNCRSAD T A WCYIP S   +C D + S +R  N     +WSYEAC+TP
Sbjct:   37 IVLKAPSNLINCGCQCDPYTWRDTLGRVQGNCRSADATKALWCYIPASAFTSCADIRQSRNRLDNFGRPRRWSYEACSTP 116
[Close]
BLAST of EMLSAG00000004889 vs. Tigriopus kingsejongenis genes
Match: maker-scaffold381_size190066-snap-gene-0.32 (protein:Tk01608 transcript:maker-scaffold381_size190066-snap-gene-0.32-mRNA-1 annotation:"---NA---")

HSP 1 Score: 72.7886 bits (177), Expect = 1.223e-17
Identity = 36/90 (40.00%), Postives = 55/90 (61.11%), Query Frame = 0 
Query:    3 TLSSAQNGIILKAPSLVQNCGCQCSSLTFADSYGRIQGNCRSADYTGARWCYIP-FSHTCNDAQYSSRFRN------QWSYEACATPRCG 85
            T+ +    II KAPS   +C CQC + T+     +I GNC +AD+T  +WCY+  +++ C+D QYS   R+      +WSY+AC+TP+ G
Sbjct:   28 TIDTKSVEIIQKAPSNRVSCNCQCDNYTYKGDDNQIHGNCFTADHTRGKWCYLDQYNNDCDDIQYSKNRRDSFGNLREWSYQACSTPQLG 117
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BLAST of EMLSAG00000004889 vs. Tigriopus kingsejongenis genes
Match: maker-scaffold381_size190066-snap-gene-0.30 (protein:Tk01607 transcript:maker-scaffold381_size190066-snap-gene-0.30-mRNA-1 annotation:"hypothetical protein AN3340.2")

HSP 1 Score: 71.2478 bits (173), Expect = 3.700e-17
Identity = 36/80 (45.00%), Postives = 49/80 (61.25%), Query Frame = 0 
Query:   11 IILKAPSLVQNCGCQCSSLTFADSYGRIQGNCRSADYTGARWCYIP-FSHTCNDAQYSSRFRN------QWSYEACATPR 83
            I+ KAPS   +C CQC + T+     +I GNC SAD T A+WCY+  +S  C+D QYS   R+      +WSY+AC+TP 
Sbjct:   34 ILQKAPSNQVSCNCQCDNYTYKGGDNQIHGNCFSADQTKAKWCYVDQYSGECDDIQYSKNRRDSHGNLRKWSYQACSTPE 113
The following BLAST results are available for this feature:
BLAST of EMLSAG00000004889 vs. GO
Analysis Date: 2014-04-02 (Blast vs. GO)
Total hits: 0
Match NameE-valueIdentityDescription
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BLAST of EMLSAG00000004889 vs. C. finmarchicus
Analysis Date: 2014-05-09 (TblastN vs C. finmarchicus TSA)
Total hits: 25
Match NameE-valueIdentityDescription
gi|592848675|gb|GAXK01108869.1|9.326e-2663.75TSA: Calanus finmarchicus comp296545_c0_seq2 trans... [more]
gi|592848676|gb|GAXK01108868.1|3.052e-2565.00TSA: Calanus finmarchicus comp296545_c0_seq1 trans... [more]
gi|592906544|gb|GAXK01051831.1|1.930e-2361.64TSA: Calanus finmarchicus comp28981_c1_seq1 transc... [more]
gi|592953585|gb|GAXK01004968.1|6.285e-2356.25TSA: Calanus finmarchicus comp348412_c0_seq1 trans... [more]
gi|592932381|gb|GAXK01026172.1|2.102e-2255.81TSA: Calanus finmarchicus comp18158_c1_seq2 transc... [more]
gi|592932378|gb|GAXK01026175.1|7.708e-2256.10TSA: Calanus finmarchicus comp18158_c1_seq5 transc... [more]
gi|592932379|gb|GAXK01026174.1|9.442e-2259.46TSA: Calanus finmarchicus comp18158_c1_seq4 transc... [more]
gi|592956545|gb|GAXK01002011.1|9.245e-2151.16TSA: Calanus finmarchicus comp90527_c0_seq22 trans... [more]
gi|592956547|gb|GAXK01002009.1|9.293e-2151.16TSA: Calanus finmarchicus comp90527_c0_seq20 trans... [more]
gi|592956546|gb|GAXK01002010.1|1.253e-2051.81TSA: Calanus finmarchicus comp90527_c0_seq21 trans... [more]

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BLAST of EMLSAG00000004889 vs. L. salmonis peptides
Analysis Date: 2014-05-10 (Blastp vs. self)
Total hits: 22
Match NameE-valueIdentityDescription
EMLSAP000000048896.724e-63100.00pep:novel supercontig:LSalAtl2s:LSalAtl2s257:17935... [more]
EMLSAP000000028908.074e-3058.33pep:novel supercontig:LSalAtl2s:LSalAtl2s166:44571... [more]
EMLSAP000000071233.523e-2758.43pep:novel supercontig:LSalAtl2s:LSalAtl2s401:84241... [more]
EMLSAP000000071229.681e-2758.43pep:novel supercontig:LSalAtl2s:LSalAtl2s401:64891... [more]
EMLSAP000000123225.402e-2656.10pep:novel supercontig:LSalAtl2s:LSalAtl2s8:1311290... [more]
EMLSAP000000010155.640e-2657.30pep:novel supercontig:LSalAtl2s:LSalAtl2s116:78676... [more]
EMLSAP000000061412.135e-2554.02pep:novel supercontig:LSalAtl2s:LSalAtl2s335:38893... [more]
EMLSAP000000071175.134e-2557.30pep:novel supercontig:LSalAtl2s:LSalAtl2s401:30551... [more]
EMLSAP000000061398.035e-2451.72pep:novel supercontig:LSalAtl2s:LSalAtl2s335:34711... [more]
EMLSAP000000010112.207e-2153.33pep:novel supercontig:LSalAtl2s:LSalAtl2s116:64409... [more]

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BLAST of EMLSAG00000004889 vs. SwissProt
Analysis Date: 2017-02-10 (Blastp vs. SwissProt)
Total hits: 0
Match NameE-valueIdentityDescription
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BLAST of EMLSAG00000004889 vs. Select Arthropod Genomes
Analysis Date: 2017-02-20 (Blastp vs. Selected Arthropods)
Total hits: 0
Match NameE-valueIdentityDescription
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BLAST of EMLSAG00000004889 vs. nr
Analysis Date: 2017-02-20 (Blastp vs. NR (2/2017))
Total hits: 2
Match NameE-valueIdentityDescription
gi|155966135|gb|ABU41022.1|2.492e-2053.93hypothetical protein [Lepeophtheirus salmonis][more]
gi|155966304|gb|ABU41105.1|2.594e-742.67hypothetical protein [Lepeophtheirus salmonis][more]
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BLAST of EMLSAG00000004889 vs. Tigriopus kingsejongenis genes
Analysis Date: 2018-04-18 (Blastp vs. Tigriopus kingsejongensis proteins)
Total hits: 3
Match NameE-valueIdentityDescription
maker-scaffold381_size190066-snap-gene-0.312.434e-2256.25protein:Tk01605 transcript:maker-scaffold381_size1... [more]
maker-scaffold381_size190066-snap-gene-0.321.223e-1740.00protein:Tk01608 transcript:maker-scaffold381_size1... [more]
maker-scaffold381_size190066-snap-gene-0.303.700e-1745.00protein:Tk01607 transcript:maker-scaffold381_size1... [more]
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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
LSalAtl2s257supercontigLSalAtl2s257:179358..180381 +
Analyses
This gene is derived from or has results from the following analyses
Analysis NameDate Performed
ensembl2013-09-26 .965016
Blast vs. GO2014-04-02
TblastN vs C. finmarchicus TSA2014-05-09
Blastp vs. self2014-05-10
Blastp vs. SwissProt2017-02-10
Blastp vs. Selected Arthropods2017-02-20
Blastp vs. NR (2/2017)2017-02-20
Blastp vs. Tigriopus kingsejongensis proteins2018-04-18
Properties
Property NameValue
Logic nameensemblgenomes
Descriptionmaker-LSalAtl2s257-augustus-gene-1.12
Biotypeprotein_coding
EvidenceIEA
Notehypothetical protein [Lepeophtheirus salmonis]
Cross References
External references for this gene
DatabaseAccession
Ensembl Metazoa (gene)EMLSAG00000004889 (primary cross-reference)
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameSpeciesType
EMLSAT00000004889EMLSAT00000004889-700736Lepeophtheirus salmonismRNA


Sequences
The following sequences are available for this feature:

gene from alignment at LSalAtl2s257:179358..180381+

Legend: mRNA
Hold the cursor over a type above to highlight its positions in the sequence below.
>EMLSAG00000004889-687655 ID=EMLSAG00000004889-687655|Name=EMLSAG00000004889|organism=Lepeophtheirus salmonis|type=gene|length=1024bp|location=Sequence derived from alignment at LSalAtl2s257:179358..180381+ (Lepeophtheirus salmonis)
GTATTCCTCGGAATGTTAACACTTTCCTCCGCTCAGAATGGCATCATTCT
GAAAGCCCCTTCTCTTGTGCAAAACTGTGGATGTCAATGCTCTTCTCTTA
CTTTTGCTGATAGCTATGGACGCATTCAAGGAAACTGCAGATCGTGGGTG
ACTCTTTCTTAACTATCCCTTCAAACAATTAATTATATTCTCATCACTTA
TTTCCATTATTTTCTAGGGCTGATTATACAGGGGCTCGTTGGTGCTACAT
ACCATTTAGTCATACGTGCAATGATGCACAATATTCCTCCCGATTTAGAA
ATCAATGGTCATATGAAGCATGTGCTACTCCAAGATGCGGTGGATTATAT
ACCAAGTAAGGAGTGAATAATGGGTTTGGCAGCTATAACTTTAATGGTTT
TTTTCTCTAGTTTTTTAGGATGAAAAGGATTTCACAAATAAAATGATGGA
TTTCAATGTGAATCAGAATATAACTACCTAAGTAAATCGACATGTTATGC
TTTGTAGATTCAAACAAGCAAATAGCTTGGACTTTTAATTCCATTTTACA
GTGAATTCAATCATTTCTTTGTATTTATATATATATTTTTTTATTAAACG
GTACGAACATTATTCGATATCTAGAGTATTCTATTCAAAGCACTTAATAT
ATACAGATAAAACGATATTTTACAGTTGGGTATGAGCAAACTAAAACTAA
AGTTGGTGTGAAAGTAAAATAATTTGAAAAACCAAAACAAAGGCATTATG
GAATAATTAAGTAAATATCAAAATTTCGAAGAATATTATCCTATAGAGAT
ACGATGCAAATATTGGATATTTTTCTTGATATAAACCGATAGGTTTTCCT
ATTTCTATCTAACATATAAGCCCGCGTCTTCGAGGGGGGTCTGAAAAGAT
TCCAAACTGAATGTGAAGATGTCAGCACCTGTAAATAAAAGATAGCCACA
TCTATCTAGCATCTGTTGATAGTAACTTGGGGCATGAACAGGGGTTGGGC
TAGAAGGGCTATAAGCCACCCTCC
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