EMLSAG00000009369, EMLSAG00000009369-692135 (gene) Lepeophtheirus salmonis

Overview
NameEMLSAG00000009369
Unique NameEMLSAG00000009369-692135
Typegene
OrganismLepeophtheirus salmonis (salmon louse)
Associated RNAi Experiments

Nothing found

Homology
[Close]
BLAST of EMLSAG00000009369 vs. C. finmarchicus
Match: gi|592951770|gb|GAXK01006783.1| (TSA: Calanus finmarchicus comp69832_c1_seq3 transcribed RNA sequence)

HSP 1 Score: 49.2914 bits (116), Expect = 6.254e-7
Identity = 42/133 (31.58%), Postives = 63/133 (47.37%), Query Frame = 0 
Query:   41 VRCGLTESVCKWTCRLGGHSGGFCSPDADGGSSCICSE--EDLEKYVCGGDVGP---EIAGXSXAGFCQAKGRQSGNCDLIKNECACTKEYLQLSHIK-CINDEVCSVFCQYKERKANGRCEGPNKWDCKCYS 167
             RC   E  C ++C++ G SGG C+ D +    C CSE   +LE +    ++ P   ++        C A GR +G C+    +C C+ E +       C +  VC + CQ K  KA+G C G   W C+C S
Sbjct:   97 FRCSFGEFACSFSCKVLGQSGGSCADDGE----CFCSELPLNLENF---QELLPSRCQLGASFCDKTCHAIGRFNGTCNDDNTDCTCSDESVSAEEFALCASQSVCILNCQRK-GKASGVCNG---WACECVS 462

HSP 2 Score: 28.8758 bits (63), Expect = 8.130e+0
Identity = 29/96 (30.21%), Postives = 39/96 (40.62%), Query Frame = 0 
Query:   28 LSTNLKRVKRNDLVRCGLTESVCKWTCRLGGHSGGFCSPDADGGSSCICSEEDL--EKYVCGGDVGPEIAGXSXAGFCQAKGRQSGNCDLIKNECA 121
            L  NL+  +     RC L  S C  TC   G   G C+ D    + C CS+E +  E++         I        CQ KG+ SG C+    EC 
Sbjct:  199 LPLNLENFQELLPSRCQLGASFCDKTCHAIGRFNGTCNDD---NTDCTCSDESVSAEEFALCASQSVCILN------CQRKGKASGVCNGWACECV 459
[Close]
BLAST of EMLSAG00000009369 vs. C. finmarchicus
Match: gi|592951771|gb|GAXK01006782.1| (TSA: Calanus finmarchicus comp69832_c1_seq2 transcribed RNA sequence)

HSP 1 Score: 49.2914 bits (116), Expect = 6.719e-7
Identity = 42/133 (31.58%), Postives = 63/133 (47.37%), Query Frame = 0 
Query:   41 VRCGLTESVCKWTCRLGGHSGGFCSPDADGGSSCICSE--EDLEKYVCGGDVGP---EIAGXSXAGFCQAKGRQSGNCDLIKNECACTKEYLQLSHIK-CINDEVCSVFCQYKERKANGRCEGPNKWDCKCYS 167
             RC   E  C ++C++ G SGG C+ D +    C CSE   +LE +    ++ P   ++        C A GR +G C+    +C C+ E +       C +  VC + CQ K  KA+G C G   W C+C S
Sbjct:   97 FRCSFGEFACSFSCKVLGQSGGSCADDGE----CFCSELPLNLENF---QELLPSRCQLGASFCDKTCHAIGRFNGTCNDDNTDCTCSDESVSAEEFALCASQSVCILNCQRK-GKASGVCNG---WACECVS 462

HSP 2 Score: 28.8758 bits (63), Expect = 8.246e+0
Identity = 29/96 (30.21%), Postives = 39/96 (40.62%), Query Frame = 0 
Query:   28 LSTNLKRVKRNDLVRCGLTESVCKWTCRLGGHSGGFCSPDADGGSSCICSEEDL--EKYVCGGDVGPEIAGXSXAGFCQAKGRQSGNCDLIKNECA 121
            L  NL+  +     RC L  S C  TC   G   G C+ D    + C CS+E +  E++         I        CQ KG+ SG C+    EC 
Sbjct:  199 LPLNLENFQELLPSRCQLGASFCDKTCHAIGRFNGTCNDD---NTDCTCSDESVSAEEFALCASQSVCILN------CQRKGKASGVCNGWACECV 459
[Close]
BLAST of EMLSAG00000009369 vs. C. finmarchicus
Match: gi|592951772|gb|GAXK01006781.1| (TSA: Calanus finmarchicus comp69832_c1_seq1 transcribed RNA sequence)

HSP 1 Score: 49.2914 bits (116), Expect = 9.741e-7
Identity = 42/133 (31.58%), Postives = 63/133 (47.37%), Query Frame = 0 
Query:   41 VRCGLTESVCKWTCRLGGHSGGFCSPDADGGSSCICSE--EDLEKYVCGGDVGP---EIAGXSXAGFCQAKGRQSGNCDLIKNECACTKEYLQLSHIK-CINDEVCSVFCQYKERKANGRCEGPNKWDCKCYS 167
             RC   E  C ++C++ G SGG C+ D +    C CSE   +LE +    ++ P   ++        C A GR +G C+    +C C+ E +       C +  VC + CQ K  KA+G C G   W C+C S
Sbjct:   97 FRCSFGEFACSFSCKVLGQSGGSCADDGE----CFCSELPLNLENF---QELLPSRCQLGASFCDKTCHAIGRFNGTCNDDNTDCTCSDESVSAEEFALCASQSVCILNCQRK-GKASGVCNG---WACECVS 462

HSP 2 Score: 28.8758 bits (63), Expect = 9.048e+0
Identity = 29/96 (30.21%), Postives = 39/96 (40.62%), Query Frame = 0 
Query:   28 LSTNLKRVKRNDLVRCGLTESVCKWTCRLGGHSGGFCSPDADGGSSCICSEEDL--EKYVCGGDVGPEIAGXSXAGFCQAKGRQSGNCDLIKNECA 121
            L  NL+  +     RC L  S C  TC   G   G C+ D    + C CS+E +  E++         I        CQ KG+ SG C+    EC 
Sbjct:  199 LPLNLENFQELLPSRCQLGASFCDKTCHAIGRFNGTCNDD---NTDCTCSDESVSAEEFALCASQSVCILN------CQRKGKASGVCNGWACECV 459
[Close]
BLAST of EMLSAG00000009369 vs. C. finmarchicus
Match: gi|592807447|gb|GAXK01147121.1| (TSA: Calanus finmarchicus comp42486_c1_seq1 transcribed RNA sequence)

HSP 1 Score: 43.5134 bits (101), Expect = 8.260e-5
Identity = 42/136 (30.88%), Postives = 60/136 (44.12%), Query Frame = 0 
Query:   41 VRCGLTESVCKWTCRLGGHSGGFCSPDADGGSSCICSEEDLEKYVCGGDVGPEIAGXSXAGFCQAK----GRQSGNCDLI-KNECACTKEYLQLSHIK-CINDEVCSVFCQYKERKANGRCEGPNKWDCKCYSMKE 170
             RC L E  C  +C   G + G C  + D    CICSE+ +       ++ P       + FCQA     GR+SG C      +C C++ Y+       C  +  C + CQ ++  A G C G   W CKC S K+
Sbjct:  134 FRCSLGELACSASCVTLGQTSGICDAEGD----CICSEKSISLNN-FRNLLPSRCNLGLS-FCQATCNALGRESGTCAATGATDCQCSENYISPKAFALCAAESTCRLDCQ-RQGLATGECFG---WSCKCQSKKD 511
[Close]
BLAST of EMLSAG00000009369 vs. C. finmarchicus
Match: gi|592860806|gb|GAXK01096756.1| (TSA: Calanus finmarchicus comp55821_c0_seq1 transcribed RNA sequence)

HSP 1 Score: 36.5798 bits (83), Expect = 1.628e-2
Identity = 29/85 (34.12%), Postives = 38/85 (44.71%), Query Frame = 0 
Query:   29 STNLKRVKRNDLVRCGLTESVCKWTCRLGGHSGGFCSPDADGGSSCICSEEDLEKYVCGGDVGPEIAGXSXAGFCQAKGRQSGNC 113
            S +LK  K+    RC L +S C+ TC   G   G C     GGS C CSE+    Y+   D     A  +    CQ +G  +G C
Sbjct:  198 SISLKNFKKLLPSRCNLGQSFCEVTCNSIGRKNGTCGTTDSGGSDCQCSED----YLSPSDFALCGAESTCRLDCQRQGLATGEC 440

HSP 2 Score: 33.113 bits (74), Expect = 2.829e-1
Identity = 25/75 (33.33%), Postives = 38/75 (50.67%), Query Frame = 0 
Query:  103 CQAKGRQSGNC---DLIKNECACTKEYLQLSHIK-CINDEVCSVFCQYKERKANGRCEGPNKWDCKCYSMKELNL 173
            C + GR++G C   D   ++C C+++YL  S    C  +  C + CQ ++  A G C G   W CKC S  +  L
Sbjct:  153 CNSIGRKNGTCGTTDSGGSDCQCSEDYLSPSDFALCGAESTCRLDCQ-RQGLATGECFG---WSCKCQSKDDATL 365
[Close]
BLAST of EMLSAG00000009369 vs. C. finmarchicus
Match: gi|592840602|gb|GAXK01116942.1| (TSA: Calanus finmarchicus comp490909_c0_seq1 transcribed RNA sequence)

HSP 1 Score: 35.8094 bits (81), Expect = 3.852e-2
Identity = 30/99 (30.30%), Postives = 52/99 (52.53%), Query Frame = 0 
Query:   28 LSTNLKRVKRNDLVRCGLTESVCKWTCRLGGHSGGFCSPDADGGS-SCICSEEDLEKYVCGGDVGPEIAGXSXAGFCQAKGRQSGNCDLIKNECACTKE 125
            L++   R KR D+    L  + C+W+C+L G + G C+ + + G+ +C C +E     +C  ++GP     +    C+  GR SG CD  +  CAC+ +
Sbjct:  103 LTSPAMRTKR-DVTCASLGHNSCRWSCKLRGRASGECAWNMNTGAFNCECDKEP-RGVIC--NIGPHTCNHT----CRILGRISGECDE-QFRCACSGQ 372
[Close]
BLAST of EMLSAG00000009369 vs. C. finmarchicus
Match: gi|592830758|gb|GAXK01126786.1| (TSA: Calanus finmarchicus comp47097_c0_seq1 transcribed RNA sequence)

HSP 1 Score: 33.113 bits (74), Expect = 3.034e-1
Identity = 40/147 (27.21%), Postives = 57/147 (38.78%), Query Frame = 0 
Query:   28 LSTNLKRVKRNDLVRCGLTESVCKWTCRLGGHSGGFCSPDADGGSSCICSE-----EDLEKYVCGG-DVGPEIAGXSXAGFCQAKGRQSGNCDLIKNECACTKEYLQLSH-IKCINDEVCSVFCQYKERKANGRCEGPNKWDCKCYS 167
            +  +L  V  +   RC      C   C + G + G C    D    C CSE      D    +    D+G  +   +    C + GR +G CD  K  C C+ ++L  S  + C     C + CQ K     G C G   W C+C S
Sbjct:  112 IFISLLTVGAHGGFRCTFGNWACTAGCVMLGQTSGLC----DDAGKCWCSERSIALSDFRALLPSRCDLGQAVCETT----CHSLGRINGTCD--KFGCECSDDFLTPSQFLLCAAASTCRMDCQAKGH-GTGECLG---WSCECRS 510
[Close]
BLAST of EMLSAG00000009369 vs. C. finmarchicus
Match: gi|592929112|gb|GAXK01029433.1| (TSA: Calanus finmarchicus comp151809_c2_seq2 transcribed RNA sequence)

HSP 1 Score: 30.4166 bits (67), Expect = 2.874e+0
Identity = 36/130 (27.69%), Postives = 46/130 (35.38%), Query Frame = 0 
Query:   41 VRCGLTESVCKWTCRLGGHSGGFCSPDADGGSSCICSEE--DLEKYVCGGDVGPEIAGXSXAGFCQAKGRQSGNCDLIKNECACTKEYLQLSH-IKCINDEVCSVFCQYKERKANGRCEGPNKWDCKCYS 167
             RC      C   C   G + G C    D    C CSE    L  +         +      G C + GR +G C      C C+ E+L  S  + C     C + CQ K     G C G   W C+C S
Sbjct:   94 FRCTFGNWACTAGCVALGQTSGLC----DDAGKCWCSESSISLNNFRALLPSRCNLGNAVCEGTCHSLGRSTGTCGTYG--CTCSDEFLTPSQFLLCAAASTCRMDCQAKGH-GTGECLG---WACECRS 453
[Close]
BLAST of EMLSAG00000009369 vs. C. finmarchicus
Match: gi|592929113|gb|GAXK01029432.1| (TSA: Calanus finmarchicus comp151809_c2_seq1 transcribed RNA sequence)

HSP 1 Score: 30.4166 bits (67), Expect = 3.365e+0
Identity = 36/130 (27.69%), Postives = 46/130 (35.38%), Query Frame = 0 
Query:   41 VRCGLTESVCKWTCRLGGHSGGFCSPDADGGSSCICSEE--DLEKYVCGGDVGPEIAGXSXAGFCQAKGRQSGNCDLIKNECACTKEYLQLSH-IKCINDEVCSVFCQYKERKANGRCEGPNKWDCKCYS 167
             RC      C   C   G + G C    D    C CSE    L  +         +      G C + GR +G C      C C+ E+L  S  + C     C + CQ K     G C G   W C+C S
Sbjct:  364 FRCTFGNWACTAGCVALGQTSGLC----DDAGKCWCSESSISLNNFRALLPSRCNLGNAVCEGTCHSLGRSTGTCGTYG--CTCSDEFLTPSQFLLCAAASTCRMDCQAKGH-GTGECLG---WACECRS 723
[Close]
BLAST of EMLSAG00000009369 vs. C. finmarchicus
Match: gi|592756452|gb|GAXK01197961.1| (TSA: Calanus finmarchicus comp4313999_c0_seq1 transcribed RNA sequence)

HSP 1 Score: 28.8758 bits (63), Expect = 6.985e+0
Identity = 12/29 (41.38%), Postives = 20/29 (68.97%), Query Frame = 0 
Query:  141 SVFCQYKERKANGRCEGPNKWDC-KCYSM 168
            SV  Q++E +  G+  GPN+W+  +CYS+
Sbjct:   43 SVVPQWEE*EREGKSSGPNEWETIQCYSL 129
[Close]
BLAST of EMLSAG00000009369 vs. L. salmonis peptides
Match: EMLSAP00000009369 (pep:novel supercontig:LSalAtl2s:LSalAtl2s599:352791:354595:-1 gene:EMLSAG00000009369 transcript:EMLSAT00000009369 description:"maker-LSalAtl2s599-snap-gene-3.41")

HSP 1 Score: 347.436 bits (890), Expect = 4.925e-123
Identity = 174/174 (100.00%), Postives = 174/174 (100.00%), Query Frame = 0 
Query:    1 MGINKFLSFNNSLLVIFFILLSISREGLSTNLKRVKRNDLVRCGLTESVCKWTCRLGGHSGGFCSPDADGGSSCICSEEDLEKYVCGGDVGPEIAGXSXAGFCQAKGRQSGNCDLIKNECACTKEYLQLSHIKCINDEVCSVFCQYKERKANGRCEGPNKWDCKCYSMKELNLL 174
            MGINKFLSFNNSLLVIFFILLSISREGLSTNLKRVKRNDLVRCGLTESVCKWTCRLGGHSGGFCSPDADGGSSCICSEEDLEKYVCGGDVGPEIAGXSXAGFCQAKGRQSGNCDLIKNECACTKEYLQLSHIKCINDEVCSVFCQYKERKANGRCEGPNKWDCKCYSMKELNLL
Sbjct:    1 MGINKFLSFNNSLLVIFFILLSISREGLSTNLKRVKRNDLVRCGLTESVCKWTCRLGGHSGGFCSPDADGGSSCICSEEDLEKYVCGGDVGPEIAGXSXAGFCQAKGRQSGNCDLIKNECACTKEYLQLSHIKCINDEVCSVFCQYKERKANGRCEGPNKWDCKCYSMKELNLL 174
[Close]
BLAST of EMLSAG00000009369 vs. L. salmonis peptides
Match: EMLSAP00000009525 (pep:novel supercontig:LSalAtl2s:LSalAtl2s612:448569:453649:-1 gene:EMLSAG00000009525 transcript:EMLSAT00000009525 description:"augustus_masked-LSalAtl2s612-processed-gene-4.2")

HSP 1 Score: 118.627 bits (296), Expect = 2.036e-34
Identity = 55/88 (62.50%), Postives = 72/88 (81.82%), Query Frame = 0 
Query:   11 NSLLVIFFILLSISREGLSTNLKRVKRNDLVRCGLTESVCKWTCRLGGHSGGFCSPDADGGSSCICSEEDLEKYVCGGDVGPEIAGXS 98
             S ++I F+ L I +  LS +L RV+R+D+VRCG++ES+CKWTCR+GGHS GFCSP  DGGS CICS+EDL+KY+CGGDV P+IAG +
Sbjct:    2 KSAILISFLSLQIVQV-LSDSLSRVRRSDVVRCGISESICKWTCRIGGHSSGFCSPGPDGGSDCICSDEDLDKYLCGGDVDPDIAGYT 88
[Close]
BLAST of EMLSAG00000009369 vs. L. salmonis peptides
Match: EMLSAP00000009368 (pep:novel supercontig:LSalAtl2s:LSalAtl2s599:336881:337404:-1 gene:EMLSAG00000009368 transcript:EMLSAT00000009368 description:"snap_masked-LSalAtl2s599-processed-gene-3.11")

HSP 1 Score: 109.383 bits (272), Expect = 2.807e-30
Identity = 53/135 (39.26%), Postives = 83/135 (61.48%), Query Frame = 0 
Query:   32 LKRVKRNDLVRCGLTESVCKWTCRLGGHSGGFCSPDADGGSSCICSEEDLEKYVCGGDVGPEIAGXSXAGFCQAKGRQSGNCDLIKNECACTKEYLQLSH-IKCINDEVCSVFCQYKERKANGRCEGPNKWDCKC 165
            ++    ++ +RC L+ES+C ++C  GG+  G C P+ +GG +C+C  E L++ +C  D   + +    AG+CQ  GRQ+GNC+   N C C++E   LS    C+ +EVCS+ CQ     +NG+C GPN WDC+C
Sbjct:    1 MQEESPSNHLRCQLSESICSFSCLFGGYKTGLCIPNENGGKACVCVNEMLQESICQPDNEEKTSAYMCAGYCQVIGRQTGNCE--NNVCECSRERFYLSRDYLCVANEVCSMHCQIVRGGSNGKCSGPNNWDCEC 133
[Close]
BLAST of EMLSAG00000009369 vs. L. salmonis peptides
Match: EMLSAP00000009367 (pep:novel supercontig:LSalAtl2s:LSalAtl2s599:333271:333800:-1 gene:EMLSAG00000009367 transcript:EMLSAT00000009367 description:"augustus_masked-LSalAtl2s599-processed-gene-3.3")

HSP 1 Score: 80.4925 bits (197), Expect = 3.067e-19
Identity = 44/134 (32.84%), Postives = 69/134 (51.49%), Query Frame = 0 
Query:   38 NDLVRCGLTESVCKWTCRLGGHSGGFCSPDADGGSSCICSEEDLEKYVCGGDVGPEIAGXSXAGFCQAKGRQSGNCDLIKNECACTKEYLQLSHIK-CINDEVCSVFCQYKERKANGRCEGPN-KWDCKCYSMK 169
            N  + C  +  +C+W+C  G ++GG C     G   C C E + +K +C G   PE AG +   FCQ+ GR  G C    ++C C+   +   +   C+ DEVCSVFC+     + G+C G     +C+C+S +
Sbjct:   14 NRRISCDQSPIICEWSCAFGVNTGGTCLKVESGRRECFCYETNAQKTICAGYFRPENAGRACKTFCQSIGRIGGECMADNHDCICSTSRIPYFYRSLCVTDEVCSVFCKTYRGLSGGQCTGXGITKECECFSRR 147
[Close]
BLAST of EMLSAG00000009369 vs. L. salmonis peptides
Match: EMLSAP00000003955 (pep:novel supercontig:LSalAtl2s:LSalAtl2s211:994215:1002048:1 gene:EMLSAG00000003955 transcript:EMLSAT00000003955 description:"augustus_masked-LSalAtl2s211-processed-gene-10.7")

HSP 1 Score: 58.5362 bits (140), Expect = 1.799e-11
Identity = 49/156 (31.41%), Postives = 66/156 (42.31%), Query Frame = 0 
Query:   42 RCG-LTESVCKWTCRLGGHSGGFCSPDADGGSSCICSEEDLE--------------------------KYVCGGDVGPEIAGXSXAGFCQAKGRQSGNCDLIKNECACTKEYLQLSHIK-CINDEVCSVFCQYKERKANGRCEGPNKWDCKCYSMK 169
            RCG L E  CK TC+  GH+ G C    D  + C CSE+DL+                           Y     +   I   +    CQA GR++G C+    +C C  E++       C+ D +C V CQ K   A G+CEG   WDC C + K
Sbjct:   24 RCGYLGEWACKLTCKATGHTTGKC----DAKTECNCSEKDLDVSKEIDDILDGIDIRDKISEKVTEFTNYASSWQIEESIKKST----CQAVGRRNGVCNSDNTDCDCDDEFVSPRQWALCVEDAICRVDCQRKGY-ARGKCEGEFGWDCNCITSK 170
[Close]
BLAST of EMLSAG00000009369 vs. Tigriopus kingsejongenis genes
Match: maker-scaffold508_size152036-snap-gene-0.17 (protein:Tk11405 transcript:maker-scaffold508_size152036-snap-gene-0.17-mRNA-1 annotation:"hypothetical protein H257_02733")

HSP 1 Score: 133.265 bits (334), Expect = 2.540e-40
Identity = 77/164 (46.95%), Postives = 101/164 (61.59%), Query Frame = 0 
Query:   11 NSLLVIFFIL--LSISREGLSTNLKRVKRNDLVRC-GLTESVCKWTCRLGGHSGGFCSPDADGGSSCICSEEDLEKYVCGGDVGPEIAGXSXAGFCQAKGRQSGNCDLIKNECACTK-EYLQLSHIKCINDEVCSVFCQYKERKANGRCEGPNKWDCKCYSMKE 170
            N +L IF +L  LS++  G      R KR D +RC   +   C+W+CRL GHSGG C  D    + C CSEEDL++YVCGG+V    A    AG+CQ +G Q+G+CD    EC CT+ + L   HIKCIN+E CS++CQ+K RK+ G C G N W+C C S  E
Sbjct:    6 NCVLAIFLVLALLSVANGGEI----RRKREDRIRCRTFSGLFCRWSCRLLGHSGGSCDAD----NECRCSEEDLDRYVCGGNVTETTANNLCAGWCQFRGLQTGDCDFTNGECQCTENDKLATRHIKCINEEACSIYCQFK-RKSAGFCGGTNDWECICLSKDE 160
[Close]
BLAST of EMLSAG00000009369 vs. Tigriopus kingsejongenis genes
Match: maker-scaffold365_size194585-snap-gene-0.23 (protein:Tk02274 transcript:maker-scaffold365_size194585-snap-gene-0.23-mRNA-1 annotation:"hypothetical protein PHYSODRAFT_302006")

HSP 1 Score: 61.6178 bits (148), Expect = 3.123e-12
Identity = 52/173 (30.06%), Postives = 75/173 (43.35%), Query Frame = 0 
Query:   42 RCGL-----TESVCKWTCRLGGHSGGFCSPDADGGSSCICSEEDLE------KYVCGGDV---------------------------GP---EIAGXSXAGFCQAKGRQSGNCDLIKNECACTKEYLQLSHIK-CINDEVCSVFCQYKERKANGRCEGPNKWDCKCYSMKELN 172
            RCG+      +  C+ +C + GH  G C    D   SC CSE DL+      K + G DV                            P   +I     AG C   GR+ G C+   ++C C+ E +       C++D +CS+ CQ ++  A G C GP+ WDC+C+S KE N
Sbjct:   57 RCGVFSFFGNDRACRISCWVTGHKTGRC----DEEDSCNCSETDLDISESIDKLLDGLDVFEYVEEKWNQFVGEVKSWELPASIKSLAPSRCKIGNGFCAGSCHTIGRKDGKCNEDFSDCKCSDEVVTPKQYSLCLDDGICSLVCQ-RDGSARGECLGPDNWDCRCFSNKESN 224
[Close]
BLAST of EMLSAG00000009369 vs. Tigriopus kingsejongenis genes
Match: maker-scaffold231_size243715-snap-gene-1.45 (protein:Tk10030 transcript:maker-scaffold231_size243715-snap-gene-1.45-mRNA-1 annotation:"laminin subunit beta- partial")

HSP 1 Score: 58.151 bits (139), Expect = 4.020e-11
Identity = 51/199 (25.63%), Postives = 87/199 (43.72%), Query Frame = 0 
Query:    9 FNNSLLVIFFILLSISREGLSTNLKRVKRNDLVRCGLTESVCKWTCRLGGHSGGFCSPDADGGSSCICSEEDL------EKYVCGGDV-----------GPEIAGXSXA---------------GFCQAK----GRQSGNCDLIKNECACTKEYLQLSHIK-CINDEVCSVFCQYKERKANGRCEGPNKWDCKCYSMKE 170
              +SL +  F+ L++  +   +   R +   L   G  +  C+ +C + G   GFC    D   +C C+ EDL      +  + G DV             E++  S                 GFC+A     GR +G C    ++C C+ + +       C++D VCS++CQ ++  A G C+GP  W+C+CYS ++
Sbjct:    1 MRSSLFLSVFVALALGFQATPSEAIRFRCGILAFFG-NDRACRASCWVVGRKTGFC----DEEGNCNCNPEDLNVRESIDNLLGGMDVMEYVSLKYREFEEEVSSWSLTKSVKQLVPSRCRLGNGFCEASCHGIGRVTGKCSADFSDCECSPDTVAAEQYALCLDDGVCSLYCQ-RQGSARGHCKGPTGWECRCYSNQD 193
The following BLAST results are available for this feature:
BLAST of EMLSAG00000009369 vs. GO
Analysis Date: 2014-04-02 (Blast vs. GO)
Total hits: 0
Match NameE-valueIdentityDescription
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BLAST of EMLSAG00000009369 vs. C. finmarchicus
Analysis Date: 2014-05-09 (TblastN vs C. finmarchicus TSA)
Total hits: 10
Match NameE-valueIdentityDescription
gi|592951770|gb|GAXK01006783.1|6.254e-731.58TSA: Calanus finmarchicus comp69832_c1_seq3 transc... [more]
gi|592951771|gb|GAXK01006782.1|6.719e-731.58TSA: Calanus finmarchicus comp69832_c1_seq2 transc... [more]
gi|592951772|gb|GAXK01006781.1|9.741e-731.58TSA: Calanus finmarchicus comp69832_c1_seq1 transc... [more]
gi|592807447|gb|GAXK01147121.1|8.260e-530.88TSA: Calanus finmarchicus comp42486_c1_seq1 transc... [more]
gi|592860806|gb|GAXK01096756.1|1.628e-234.12TSA: Calanus finmarchicus comp55821_c0_seq1 transc... [more]
gi|592840602|gb|GAXK01116942.1|3.852e-230.30TSA: Calanus finmarchicus comp490909_c0_seq1 trans... [more]
gi|592830758|gb|GAXK01126786.1|3.034e-127.21TSA: Calanus finmarchicus comp47097_c0_seq1 transc... [more]
gi|592929112|gb|GAXK01029433.1|2.874e+027.69TSA: Calanus finmarchicus comp151809_c2_seq2 trans... [more]
gi|592929113|gb|GAXK01029432.1|3.365e+027.69TSA: Calanus finmarchicus comp151809_c2_seq1 trans... [more]
gi|592756452|gb|GAXK01197961.1|6.985e+041.38TSA: Calanus finmarchicus comp4313999_c0_seq1 tran... [more]
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BLAST of EMLSAG00000009369 vs. L. salmonis peptides
Analysis Date: 2014-05-10 (Blastp vs. self)
Total hits: 5
Match NameE-valueIdentityDescription
EMLSAP000000093694.925e-123100.00pep:novel supercontig:LSalAtl2s:LSalAtl2s599:35279... [more]
EMLSAP000000095252.036e-3462.50pep:novel supercontig:LSalAtl2s:LSalAtl2s612:44856... [more]
EMLSAP000000093682.807e-3039.26pep:novel supercontig:LSalAtl2s:LSalAtl2s599:33688... [more]
EMLSAP000000093673.067e-1932.84pep:novel supercontig:LSalAtl2s:LSalAtl2s599:33327... [more]
EMLSAP000000039551.799e-1131.41pep:novel supercontig:LSalAtl2s:LSalAtl2s211:99421... [more]
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BLAST of EMLSAG00000009369 vs. SwissProt
Analysis Date: 2017-02-10 (Blastp vs. SwissProt)
Total hits: 0
Match NameE-valueIdentityDescription
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BLAST of EMLSAG00000009369 vs. Select Arthropod Genomes
Analysis Date: 2017-02-20 (Blastp vs. Selected Arthropods)
Total hits: 0
Match NameE-valueIdentityDescription
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BLAST of EMLSAG00000009369 vs. nr
Analysis Date: 2017-02-20 (Blastp vs. NR (2/2017))
Total hits: 0
Match NameE-valueIdentityDescription
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BLAST of EMLSAG00000009369 vs. Tigriopus kingsejongenis genes
Analysis Date: 2018-04-18 (Blastp vs. Tigriopus kingsejongensis proteins)
Total hits: 3
Match NameE-valueIdentityDescription
maker-scaffold508_size152036-snap-gene-0.172.540e-4046.95protein:Tk11405 transcript:maker-scaffold508_size1... [more]
maker-scaffold365_size194585-snap-gene-0.233.123e-1230.06protein:Tk02274 transcript:maker-scaffold365_size1... [more]
maker-scaffold231_size243715-snap-gene-1.454.020e-1125.63protein:Tk10030 transcript:maker-scaffold231_size2... [more]
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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
LSalAtl2s599supercontigLSalAtl2s599:352791..354595 -
Analyses
This gene is derived from or has results from the following analyses
Analysis NameDate Performed
ensembl2013-09-26 .965016
Blast vs. GO2014-04-02
TblastN vs C. finmarchicus TSA2014-05-09
Blastp vs. self2014-05-10
Blastp vs. SwissProt2017-02-10
Blastp vs. Selected Arthropods2017-02-20
Blastp vs. NR (2/2017)2017-02-20
Blastp vs. Tigriopus kingsejongensis proteins2018-04-18
Properties
Property NameValue
Logic nameensemblgenomes
Descriptionmaker-LSalAtl2s599-snap-gene-3.41
Biotypeprotein_coding
EvidenceIEA
NoteHypothetical protein
Cross References
External references for this gene
DatabaseAccession
Ensembl Metazoa (gene)EMLSAG00000009369 (primary cross-reference)
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameSpeciesType
EMLSAT00000009369EMLSAT00000009369-705216Lepeophtheirus salmonismRNA


Sequences
The following sequences are available for this feature:

gene from alignment at LSalAtl2s599:352791..354595-

Legend: mRNA
Hold the cursor over a type above to highlight its positions in the sequence below.
>EMLSAG00000009369-692135 ID=EMLSAG00000009369-692135|Name=EMLSAG00000009369|organism=Lepeophtheirus salmonis|type=gene|length=1805bp|location=Sequence derived from alignment at LSalAtl2s599:352791..354595- (Lepeophtheirus salmonis)
ACTAGCAAAAGGAGAAACCATGGGAATAAATAAGTTCTTGAGCTTCAATA
ACTCCCTTCTCGTCATTTTCTTTATTCTTCTATCCATTAGTAGGGAAGGT
AAGATTCTCCTAAATAAAGGACTTCTCCATATTTATCTAATTGTATGTTA
TAAAAGGCCTCTCCACCAATTTAAAAAGAGTCAAACGGAATGATCTAGTT
CGATGCGGATTGACAGAGTCTGTTTGTAAGTGGACTTGTCGTCTTGGAGG
ACACTCTGGTGGNTTTTGTTCCCCAGATGCAGATGGTGGAAGTTCGTGTA
TTTGCTCAGAAGAGGATTTGGAGAAATATGTTTGCGGCGGAGATGTTGGT
CCAGAGATTGCTGGATAMTCTTKTGCTGGRTTTTGTCAGGCTAAGGGAAG
ACAATCAGGTAAGATACATGTTACCATTATTTTTATGAGAAGGCTCCTTG
TTTAAATATTTCTTCATAAGAGCTTCAAATGTTATATTTCAGTTATTTAT
CCTATATTTGTGTCATCATCATTTACTAGAGTAGAAAACGATTGAAAAAG
GCCATAAATAATACAGACGGAATGTAATGGTTAAAACTTAATAGATGTGC
ATTTTATATGTATTCCTCAAATCAAGTTACATTTATGAATAAGGAGTATA
GTTAATTACCTTTTACCTACTCCATTTATTAAGAAAAATTGAAAAACGTC
CAAAAATGCCTAGAGGGGATGGAGGGAGGGAAAATAAGTATGTTGAATCC
TATATTTTTTGGAGGCTACATAGTAATGATACGTTTTTACAATAAATGTC
AAATACAGTAATGTTTAAATCATATGATCTCCAAGTACTAAGTAGTTATA
TAAGTTTTCAACAACTCTATGATTTAAAGATTATCTAGGTAGGTATACAT
TTGGTATAAATAATATGTATCTATATACATTATAGTTGTTGTATCTAGGC
CATTATGCAAGGTTATTCAGTCAAAAATATATACACAAAATTTGTCAATT
TATAGTACAAATGTATGAGCTCTTTATTATTTGAATCCATAAATCCCTCT
CGACTATAATGAATTTATACATTAAATGTTATTACCTTATTGTATGTAAT
GTTTTAATATGTTTTAAGAACATTCACAAAATGCTCTTTCAAGAAGCATA
ACTTTTTTTTGATACGCAAAGACAATCATGTAGAAAAAGGTACTTGTACT
CAATGAGTGCTTATTTATTTTGAAGGAAGTCTCTGGTTGTACCAATAATA
TTTTTACAACTATTGATTTAGTATTTATTGGTTGTATGTATGTATATTGT
ACACTCTCTTTTGATTTATAATCATGATTAATTAATTGATTGCATAATTT
TTTATTTAATTATACGTATGTATATTAAAAATGAATCTAATTGCAACTCT
CTTAAGTGCATAATTCGTCTATAAACAATTTCAATATTAAATAAGTATCC
TTAAATTAATTAGGTATATATTATAGATAATATTTTTAAGTTTTCAATGC
TCTTCCTCTTATTTTTTACTTCCGTCAACATACACTTAGTTATACCTACT
ATTAATAGATCCTTGATAAAAAAATAACCATGCTAATATATCCATTTTTT
TATTTTGAAAACAGGAAATTGTGATCTGATTAAGAACGAATGTGCTTGTA
CAAAAGAGTATCTCCAATTAAGTCACATCAAATGTATCAATGATGAAGTT
TGCTCCGTTTTCTGTCAGTACAAGGAAAGAAAAGCTAATGGAAGATGTGA
AGGACCCAATAAATGGGACTGCAAATGTTATTCCATGAAAGAATTAAATC
TACTC
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