EMLSAG00000002982, EMLSAG00000002982-685748 (gene) Lepeophtheirus salmonis

Overview
NameEMLSAG00000002982
Unique NameEMLSAG00000002982-685748
Typegene
OrganismLepeophtheirus salmonis (salmon louse)
Associated RNAi Experiments

Nothing found

Homology
[Close]
BLAST of EMLSAG00000002982 vs. C. finmarchicus
Match: gi|592932189|gb|GAXK01026364.1| (TSA: Calanus finmarchicus comp19860_c0_seq2 transcribed RNA sequence)

HSP 1 Score: 29.261 bits (64), Expect = 6.131e+0
Identity = 12/40 (30.00%), Postives = 19/40 (47.50%), Query Frame = 0 
Query:    9 ILSCIFIGALGGFDXTCADKRRDCKADNVLCMQPYYYFQC 48
            +  C++ G L G   +  +  R C A   +C    YY+QC
Sbjct:  846 LFGCLYSGDLFGTSGSFRNTFRQCTATEFICNIHSYYYQC 965
[Close]
BLAST of EMLSAG00000002982 vs. C. finmarchicus
Match: gi|592932190|gb|GAXK01026363.1| (TSA: Calanus finmarchicus comp19860_c0_seq1 transcribed RNA sequence)

HSP 1 Score: 29.261 bits (64), Expect = 6.135e+0
Identity = 12/40 (30.00%), Postives = 19/40 (47.50%), Query Frame = 0 
Query:    9 ILSCIFIGALGGFDXTCADKRRDCKADNVLCMQPYYYFQC 48
            +  C++ G L G   +  +  R C A   +C    YY+QC
Sbjct:  846 LFGCLYSGDLFGTSGSFRNTFRQCTATEFICNIHSYYYQC 965
[Close]
BLAST of EMLSAG00000002982 vs. C. finmarchicus
Match: gi|592862876|gb|GAXK01094686.1| (TSA: Calanus finmarchicus comp49697_c1_seq1 transcribed RNA sequence)

HSP 1 Score: 29.261 bits (64), Expect = 6.224e+0
Identity = 15/49 (30.61%), Postives = 21/49 (42.86%), Query Frame = 0 
Query:   53 GCTGCNDLVKQTICALNVHRCNEYNVLYLCSNTCGKCQERCRNKMGSDY 101
            G  GC    K T   +  HRC E      C+N C  C     N +G+++
Sbjct:  974 GRGGC---YKHTFYGIESHRCMETTPSLACANKCVFCWRHHSNPVGTEW 1111
[Close]
BLAST of EMLSAG00000002982 vs. C. finmarchicus
Match: gi|592932185|gb|GAXK01026368.1| (TSA: Calanus finmarchicus comp19860_c0_seq6 transcribed RNA sequence)

HSP 1 Score: 28.8758 bits (63), Expect = 7.107e+0
Identity = 12/40 (30.00%), Postives = 19/40 (47.50%), Query Frame = 0 
Query:    9 ILSCIFIGALGGFDXTCADKRRDCKADNVLCMQPYYYFQC 48
            +  C++ G L G   +  +  R C A   +C    YY+QC
Sbjct:  828 LFGCLYSGDLFGTSGSFRNTFRQCTATEFICNIHSYYYQC 947
[Close]
BLAST of EMLSAG00000002982 vs. C. finmarchicus
Match: gi|592932188|gb|GAXK01026365.1| (TSA: Calanus finmarchicus comp19860_c0_seq3 transcribed RNA sequence)

HSP 1 Score: 28.8758 bits (63), Expect = 7.112e+0
Identity = 12/40 (30.00%), Postives = 19/40 (47.50%), Query Frame = 0 
Query:    9 ILSCIFIGALGGFDXTCADKRRDCKADNVLCMQPYYYFQC 48
            +  C++ G L G   +  +  R C A   +C    YY+QC
Sbjct:  828 LFGCLYSGDLFGTSGSFRNTFRQCTATEFICNIHSYYYQC 947
[Close]
BLAST of EMLSAG00000002982 vs. C. finmarchicus
Match: gi|592932173|gb|GAXK01026380.1| (TSA: Calanus finmarchicus comp19860_c0_seq18 transcribed RNA sequence)

HSP 1 Score: 28.8758 bits (63), Expect = 7.144e+0
Identity = 12/40 (30.00%), Postives = 19/40 (47.50%), Query Frame = 0 
Query:    9 ILSCIFIGALGGFDXTCADKRRDCKADNVLCMQPYYYFQC 48
            +  C++ G L G   +  +  R C A   +C    YY+QC
Sbjct:  819 LFGCLYSGDLFGTSGSFRNTFRQCTATEFICNIHSYYYQC 938
[Close]
BLAST of EMLSAG00000002982 vs. C. finmarchicus
Match: gi|592932175|gb|GAXK01026378.1| (TSA: Calanus finmarchicus comp19860_c0_seq16 transcribed RNA sequence)

HSP 1 Score: 28.8758 bits (63), Expect = 7.151e+0
Identity = 12/40 (30.00%), Postives = 19/40 (47.50%), Query Frame = 0 
Query:    9 ILSCIFIGALGGFDXTCADKRRDCKADNVLCMQPYYYFQC 48
            +  C++ G L G   +  +  R C A   +C    YY+QC
Sbjct:  819 LFGCLYSGDLFGTSGSFRNTFRQCTATEFICNIHSYYYQC 938
[Close]
BLAST of EMLSAG00000002982 vs. C. finmarchicus
Match: gi|592932178|gb|GAXK01026375.1| (TSA: Calanus finmarchicus comp19860_c0_seq13 transcribed RNA sequence)

HSP 1 Score: 28.8758 bits (63), Expect = 7.193e+0
Identity = 12/40 (30.00%), Postives = 19/40 (47.50%), Query Frame = 0 
Query:    9 ILSCIFIGALGGFDXTCADKRRDCKADNVLCMQPYYYFQC 48
            +  C++ G L G   +  +  R C A   +C    YY+QC
Sbjct:  819 LFGCLYSGDLFGTSGSFRNTFRQCTATEFICNIHSYYYQC 938
[Close]
BLAST of EMLSAG00000002982 vs. C. finmarchicus
Match: gi|592787107|gb|GAXK01167461.1| (TSA: Calanus finmarchicus comp1193_c26_seq835 transcribed RNA sequence)

HSP 1 Score: 28.1054 bits (61), Expect = 7.953e+0
Identity = 24/77 (31.17%), Postives = 33/77 (42.86%), Query Frame = 0 
Query:    4 VSRLIILSCIFIGALGGFDXTCADKRRDCKADNVLCMQPYYYFQCSRTCGCTGCNDLVKQTICALNVHRCNEYNVLY 80
            VS L +L+ +   +LGG    C       K+ NV       + Q S    C  CND  + T  ALN H  N++   Y
Sbjct:   88 VSTLALLNSMMT-SLGGGKWECLSCGFQSKSTNVRYHIESKHVQSSTGYTCPKCNDYFR-TRNALNTHMSNKHKPSY 312
[Close]
BLAST of EMLSAG00000002982 vs. C. finmarchicus
Match: gi|592787171|gb|GAXK01167397.1| (TSA: Calanus finmarchicus comp1193_c26_seq771 transcribed RNA sequence)

HSP 1 Score: 28.1054 bits (61), Expect = 8.295e+0
Identity = 24/77 (31.17%), Postives = 33/77 (42.86%), Query Frame = 0 
Query:    4 VSRLIILSCIFIGALGGFDXTCADKRRDCKADNVLCMQPYYYFQCSRTCGCTGCNDLVKQTICALNVHRCNEYNVLY 80
            VS L +L+ +   +LGG    C       K+ NV       + Q S    C  CND  + T  ALN H  N++   Y
Sbjct:   64 VSTLALLNSMMT-SLGGGKWECLSCGFQSKSTNVRYHIESKHVQSSTGYTCPKCNDYFR-TRNALNTHMSNKHKPSY 288
[Close]
BLAST of EMLSAG00000002982 vs. L. salmonis peptides
Match: EMLSAP00000002982 (pep:novel supercontig:LSalAtl2s:LSalAtl2s170:193433:195225:1 gene:EMLSAG00000002982 transcript:EMLSAT00000002982 description:"maker-LSalAtl2s170-augustus-gene-2.7")

HSP 1 Score: 282.337 bits (721), Expect = 1.599e-98
Identity = 140/140 (100.00%), Postives = 140/140 (100.00%), Query Frame = 0 
Query:    1 MIQVSRLIILSCIFIGALGGFDXTCADKRRDCKADNVLCMQPYYYFQCSRTCGCTGCNDLVKQTICALNVHRCNEYNVLYLCSNTCGKCQERCRNKMGSDYVCAAFNARGYCYSTNKHSRVMRDICSATCTSGCRIKNLP 140
            MIQVSRLIILSCIFIGALGGFDXTCADKRRDCKADNVLCMQPYYYFQCSRTCGCTGCNDLVKQTICALNVHRCNEYNVLYLCSNTCGKCQERCRNKMGSDYVCAAFNARGYCYSTNKHSRVMRDICSATCTSGCRIKNLP
Sbjct:    1 MIQVSRLIILSCIFIGALGGFDXTCADKRRDCKADNVLCMQPYYYFQCSRTCGCTGCNDLVKQTICALNVHRCNEYNVLYLCSNTCGKCQERCRNKMGSDYVCAAFNARGYCYSTNKHSRVMRDICSATCTSGCRIKNLP 140
[Close]
BLAST of EMLSAG00000002982 vs. L. salmonis peptides
Match: EMLSAP00000011280 (pep:novel supercontig:LSalAtl2s:LSalAtl2s772:397975:398789:-1 gene:EMLSAG00000011280 transcript:EMLSAT00000011280 description:"maker-LSalAtl2s772-augustus-gene-3.36")

HSP 1 Score: 134.806 bits (338), Expect = 3.455e-40
Identity = 72/170 (42.35%), Postives = 90/170 (52.94%), Query Frame = 0 
Query:    1 MIQVSRLIILSCIFIGALGGFDXTCADKRRDCKADNVLCMQPYYYFQCSRTCGC----------------------------------TGCNDLVKQTICALNVHRCNEYNVLYLCSNTCGKCQERCRNKMGSDYVCAAFNARGYCYSTNKHSRVMRDICSATCTSGCRI 136
            M  + ++ ILS + +G  GGFD  C +    C  D   CM P YYFQCS+ CGC                                   GCN+LV   IC +N +RCN YNV YLC+ TCGKC E CRNKM SD VC  F+  GYC  ++ +S +MRD+C  TC+SGCRI
Sbjct:    1 MKAIIQISILSTLILGVFGGFDNICKNTMTTCTRDEFRCMDPEYYFQCSKACGCKGPCLDPNAECLGNSLICLNDPNRNACPRSCGVCEGCNNLVHDDICEINAYRCNAYNVKYLCAKTCGKCSETCRNKMASDDVCDRFHRFGYCLRSSNYSSIMRDVCYGTCSSGCRI 170
[Close]
BLAST of EMLSAG00000002982 vs. L. salmonis peptides
Match: EMLSAP00000006101 (pep:novel supercontig:LSalAtl2s:LSalAtl2s3321:782:1958:1 gene:EMLSAG00000006101 transcript:EMLSAT00000006101 description:"maker-LSalAtl2s3321-augustus-gene-0.1")

HSP 1 Score: 119.398 bits (298), Expect = 2.028e-34
Identity = 65/154 (42.21%), Postives = 91/154 (59.09%), Query Frame = 0 
Query:    1 MIQVSRLIILSCIFIGALGGFDX------------------TCADKRRDCKADNVLCMQPYYYFQCSRTCG-CTGCNDLVKQTICALNVHRCNEYNVLYLCSNTCGKCQERCRNKMGSDYVCAAFNARGYCYSTNKHSRVMRDICSATCTSGCR 135
            +IQ+S   ILS + +G  GGF+                   +C D   DC  ++ +C++     +C R CG C GCN+LV   IC  N+HRCNEYNV YLC+ TCG+C + CRNK+ +D VC  F+  GYC  T+++S +M ++C  TCTSGCR
Sbjct:    4 IIQIS---ILSALILGVFGGFENVWSPAYYFQCSQACGCTDSCLDPSADCLNESDICLKRDERRRCPRFCGACEGCNNLVHNDICDKNIHRCNEYNVRYLCAQTCGQCSKSCRNKLAADDVCNTFHKYGYCSRTSQYSTIMNEVCHGTCTSGCR 154
[Close]
BLAST of EMLSAG00000002982 vs. L. salmonis peptides
Match: EMLSAP00000002978 (pep:novel supercontig:LSalAtl2s:LSalAtl2s170:166204:168625:1 gene:EMLSAG00000002978 transcript:EMLSAT00000002978 description:"maker-LSalAtl2s170-snap-gene-1.20")

HSP 1 Score: 101.293 bits (251), Expect = 2.264e-27
Identity = 57/163 (34.97%), Postives = 84/163 (51.53%), Query Frame = 0 
Query:    3 QVSRLIILSCIFIGALGGFDXT---CADKRRDCKADNVLCMQPYYYFQCSRTCGCTG-----------------------CNDLVKQTICALNVHRCNEYNVLYLCSNTCGKCQERCRNKMGSDYVCAAFNARGYCYSTNKHSRVMRDICSATCTSGCRIKNL 139
            Q  R+++   + +G    +D     C DK   C AD   C+ P YY  C R+CGC                         C++L++   C  N + CN  ++LYLC+ TCG+C+  CRNKM S+ VC AF  R YC +++    +MRD+C A+CTSGCR  ++
Sbjct:    5 QELRIVLFCALVLGTTSAYDHEDPYCLDKEDYCTADEWNCLHPQYYHVCRRSCGCKRRGQCYDLFGDCVDFTNDCFNERRCDNLIRDEYCENNRNLCNHPSILYLCARTCGRCRNDCRNKMLSNKVCNAFVKRRYCDTSSPFCWIMRDVCHASCTSGCRHHHI 167
[Close]
BLAST of EMLSAG00000002982 vs. L. salmonis peptides
Match: EMLSAP00000008527 (pep:novel supercontig:LSalAtl2s:LSalAtl2s5266:2605:5358:1 gene:EMLSAG00000008527 transcript:EMLSAT00000008527 description:"maker-LSalAtl2s5266-augustus-gene-0.1")

HSP 1 Score: 88.5817 bits (218), Expect = 7.552e-23
Identity = 51/125 (40.80%), Postives = 66/125 (52.80%), Query Frame = 0 
Query:    1 MIQVSRLIILSCIFIGALGGFDXTCADKRRDCKADNVLCMQPYYYFQCSRTCGCTG-CND-----LVKQTICALNVHRCNEYNVLYLCSNTCGKCQERCRNKMGSDYVCAAFNARGYCYSTNKHS 119
            M  + ++ I+S + +G  GGF+  C +    C  D V C+ P YYFQCS+ CGCTG C D     L   TIC     R         C   CG C+E CRNK+ SD  C  FN  GYC+ST+ +S
Sbjct:   28 MKGIXQISIVSALILGVFGGFENVCKNTMPTCIRDEVRCLDPAYYFQCSKACGCTGSCLDPNXGCLDXSTICIXKDER-------RRCPRFCGVCEESCRNKLASDDACDRFNQFGYCFSTSPYS 145
[Close]
BLAST of EMLSAG00000002982 vs. L. salmonis peptides
Match: EMLSAP00000012207 (pep:novel supercontig:LSalAtl2s:LSalAtl2s884:37024:45519:-1 gene:EMLSAG00000012207 transcript:EMLSAT00000012207 description:"maker-LSalAtl2s884-augustus-gene-1.11")

HSP 1 Score: 85.1149 bits (209), Expect = 2.171e-21
Identity = 49/140 (35.00%), Postives = 68/140 (48.57%), Query Frame = 0 
Query:   25 CADKRRDCKADNVLCMQPYYYFQCSRTCGCTG--------------------------------CNDLVKQTICALNVHRCNEYNVLYLCSNTCGKCQERCRNKMGSDYVCAAFNARGYCYSTNKHSRVMRDICSATCTS 132
            C D+  +C+AD   C++P YYF+C RTCGC G                                C +L+K  +C    + C+  NV Y C+ TC KC+  CRNK+    VC  F A+GYC   N+HS ++R IC+  C S
Sbjct:    4 CRDEVHNCEADATSCIKPAYYFKCRRTCGCKGNCQDGDSACFKIPDRCLSTNGNCYRFCGLCDGCENLIKDELCKELRYLCHVENVKYFCAGTCNKCKYECRNKVAFTAVCNNFKAKGYCKMDNRHSYIIRKICAKACES 143
[Close]
BLAST of EMLSAG00000002982 vs. L. salmonis peptides
Match: EMLSAP00000011279 (pep:novel supercontig:LSalAtl2s:LSalAtl2s772:382917:383509:-1 gene:EMLSAG00000011279 transcript:EMLSAT00000011279 description:"maker-LSalAtl2s772-augustus-gene-3.35")

HSP 1 Score: 81.2629 bits (199), Expect = 3.346e-20
Identity = 45/122 (36.89%), Postives = 56/122 (45.90%), Query Frame = 0 
Query:    1 MIQVSRLIILSCIFIGALGGFDXTCADKRRDCKADNVLCMQPYYYFQCSRTCG----------------------------------CTGCNDLVKQTICALNVHRCNEYNVLYLCSNTCGK 88
            M  + ++ ILS + +G  GGFD  C +    C  D   CM P YYFQCS+ CG                                  C GCN+LV   IC +N +RCN YNV YLC+ TCGK
Sbjct:    1 MKAIIQISILSTLILGVFGGFDNICKNTMPTCTRDEFRCMDPEYYFQCSKACGCKGPCLDPNAECLGNSLICLNDPNRNACPRSCGVCEGCNNLVHDDICEINAYRCNAYNVKYLCAETCGK 122
[Close]
BLAST of EMLSAG00000002982 vs. L. salmonis peptides
Match: EMLSAP00000007109 (pep:novel supercontig:LSalAtl2s:LSalAtl2s400:180525:182688:-1 gene:EMLSAG00000007109 transcript:EMLSAT00000007109 description:"maker-LSalAtl2s400-augustus-gene-1.7")

HSP 1 Score: 75.0998 bits (183), Expect = 1.872e-17
Identity = 46/164 (28.05%), Postives = 69/164 (42.07%), Query Frame = 0 
Query:    2 IQVSRLIILSCIFIGALGGFDXTCADKRRDCKADNVLCMQPYYYFQCSRTCGCTG----------------------------------CNDLVKQTICALNVHRCNEYNVLYLCSNTCGKCQERCRNKMGSDYVCAAFNARGYCYSTNKHSRVMRDICSATCT 131
            + +   II+S   +   G  +  C D+++ CK D   CM P YYF+C  TCGC                                    C DL+   +C    + C+  NV Y C  TC  C++ CR+ +  D VC +F   G+C S + ++R M+  C  TC 
Sbjct:   25 MTIRLFIIISFFLVVVNGQGNIICRDEQKICKPDAYKCMNPEYYFKCKETCGCESRCTDKSIGCIQFPNRCLNQNQRVDCQRACGNCDRCEDLLNNLMCNELKNLCHNGNVRYFCPATCRLCEKACRDNLPYDIVCRSFRKSGFCDSNSIYNRFMQSACQKTCN 188
[Close]
BLAST of EMLSAG00000002982 vs. L. salmonis peptides
Match: EMLSAP00000004640 (pep:novel supercontig:LSalAtl2s:LSalAtl2s2425:15271:17023:1 gene:EMLSAG00000004640 transcript:EMLSAT00000004640 description:"maker-LSalAtl2s2425-augustus-gene-0.2")

HSP 1 Score: 74.3294 bits (181), Expect = 2.193e-17
Identity = 45/159 (28.30%), Postives = 68/159 (42.77%), Query Frame = 0 
Query:    7 LIILSCIFIGALGGFDXTCADKRRDCKADNVLCMQPYYYFQCSRTCGCT----------------------------------GCNDLVKQTICALNVHRCNEYNVLYLCSNTCGKCQERCRNKMGSDYVCAAFNARGYCYSTNKHSRVMRDICSATCT 131
            LII+S   + A G  D  C D+   C+ +   CM P YYF+C ++CGC                                   GC DL++  +C    + C+  NV Y C  TC  C++ CR+ +  + +C  F   GYC   + ++R M+  C  TC 
Sbjct:    6 LIIISFFLVVAYGQGDRMCRDEMESCETNAYKCMNPEYYFKCKKSCGCESACTDKSIKCIQNPNKCLDRDQRFECQRVCGNCDGCEDLLEHLMCNELKNLCHNENVRYFCPATCRLCEKGCRDNLPYNMMCNNFKKSGYCDRKSIYNRFMQSACQKTCN 164
[Close]
BLAST of EMLSAG00000002982 vs. L. salmonis peptides
Match: EMLSAP00000003839 (pep:novel supercontig:LSalAtl2s:LSalAtl2s2089:76:636:1 gene:EMLSAG00000003839 transcript:EMLSAT00000003839 description:"augustus_masked-LSalAtl2s2089-processed-gene-0.0")

HSP 1 Score: 56.225 bits (134), Expect = 4.154e-11
Identity = 38/111 (34.23%), Postives = 53/111 (47.75%), Query Frame = 0 
Query:   25 CADKRRDCKADNVL-CMQPYYYFQCSRTC-GCTGCNDLVKQTICALNVHRCN-EYNVLYLCSNTCGKCQERCRNKMGSDYVCAAFNARGYCYSTNKHSRVMRDICSATCTS 132
            C D    C  D V  C  P+    C +TC GC  C DL+    C L  +RCN +  + Y C  TCG C+  C N    D VC  + AR  C    + ++ M+++C  TC+ 
Sbjct:    7 CRDNNGACYRDGVEECFLPHIAKDCPKTCAGCDECEDLISIEFCELYQNRCNTDTPIRYSCRKTCGLCKSDCNNAYYDDAVCEEYKARNTCEDVFRSTK-MKEMCKKTCSD 116
[Close]
BLAST of EMLSAG00000002982 vs. nr
Match: gi|290462093|gb|ADD24094.1| (protein ZK643.6 [Lepeophtheirus salmonis])

HSP 1 Score: 72.0182 bits (175), Expect = 3.715e-13
Identity = 43/159 (27.04%), Postives = 67/159 (42.14%), Query Frame = 0 
Query:    7 LIILSCIFIGALGGFDXTCADKRRDCKADNVLCMQPYYYFQCSRTCGCTG----------------------------------CNDLVKQTICALNVHRCNEYNVLYLCSNTCGKCQERCRNKMGSDYVCAAFNARGYCYSTNKHSRVMRDICSATCT 131
            LII+S   +   G  + TC ++   C+ +   CM P YYF+C ++CGC                                    C DL++  +C    + CN  NV Y C  TC  C++ CR+ +  + VC  F   G+C   + ++R M+  C  TC 
Sbjct:    6 LIIISFFLVVVNGQGNSTCENEMESCETNTFKCMNPEYYFKCKKSCGCESACTDTSIKCINNPNKCLDRDQRLECQRACGNCDRCEDLLEHIMCNQLKNLCNNGNVRYFCPATCRLCEKSCRDNLPYNRVCHNFKKSGFCDRKSIYNRFMKSACQKTCN 164
The following BLAST results are available for this feature:
BLAST of EMLSAG00000002982 vs. GO
Analysis Date: 2014-04-02 (Blast vs. GO)
Total hits: 0
Match NameE-valueIdentityDescription
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BLAST of EMLSAG00000002982 vs. C. finmarchicus
Analysis Date: 2014-05-09 (TblastN vs C. finmarchicus TSA)
Total hits: 15
Match NameE-valueIdentityDescription
gi|592932189|gb|GAXK01026364.1|6.131e+030.00TSA: Calanus finmarchicus comp19860_c0_seq2 transc... [more]
gi|592932190|gb|GAXK01026363.1|6.135e+030.00TSA: Calanus finmarchicus comp19860_c0_seq1 transc... [more]
gi|592862876|gb|GAXK01094686.1|6.224e+030.61TSA: Calanus finmarchicus comp49697_c1_seq1 transc... [more]
gi|592932185|gb|GAXK01026368.1|7.107e+030.00TSA: Calanus finmarchicus comp19860_c0_seq6 transc... [more]
gi|592932188|gb|GAXK01026365.1|7.112e+030.00TSA: Calanus finmarchicus comp19860_c0_seq3 transc... [more]
gi|592932173|gb|GAXK01026380.1|7.144e+030.00TSA: Calanus finmarchicus comp19860_c0_seq18 trans... [more]
gi|592932175|gb|GAXK01026378.1|7.151e+030.00TSA: Calanus finmarchicus comp19860_c0_seq16 trans... [more]
gi|592932178|gb|GAXK01026375.1|7.193e+030.00TSA: Calanus finmarchicus comp19860_c0_seq13 trans... [more]
gi|592787107|gb|GAXK01167461.1|7.953e+031.17TSA: Calanus finmarchicus comp1193_c26_seq835 tran... [more]
gi|592787171|gb|GAXK01167397.1|8.295e+031.17TSA: Calanus finmarchicus comp1193_c26_seq771 tran... [more]

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BLAST of EMLSAG00000002982 vs. L. salmonis peptides
Analysis Date: 2014-05-10 (Blastp vs. self)
Total hits: 15
Match NameE-valueIdentityDescription
EMLSAP000000029821.599e-98100.00pep:novel supercontig:LSalAtl2s:LSalAtl2s170:19343... [more]
EMLSAP000000112803.455e-4042.35pep:novel supercontig:LSalAtl2s:LSalAtl2s772:39797... [more]
EMLSAP000000061012.028e-3442.21pep:novel supercontig:LSalAtl2s:LSalAtl2s3321:782:... [more]
EMLSAP000000029782.264e-2734.97pep:novel supercontig:LSalAtl2s:LSalAtl2s170:16620... [more]
EMLSAP000000085277.552e-2340.80pep:novel supercontig:LSalAtl2s:LSalAtl2s5266:2605... [more]
EMLSAP000000122072.171e-2135.00pep:novel supercontig:LSalAtl2s:LSalAtl2s884:37024... [more]
EMLSAP000000112793.346e-2036.89pep:novel supercontig:LSalAtl2s:LSalAtl2s772:38291... [more]
EMLSAP000000071091.872e-1728.05pep:novel supercontig:LSalAtl2s:LSalAtl2s400:18052... [more]
EMLSAP000000046402.193e-1728.30pep:novel supercontig:LSalAtl2s:LSalAtl2s2425:1527... [more]
EMLSAP000000038394.154e-1134.23pep:novel supercontig:LSalAtl2s:LSalAtl2s2089:76:6... [more]

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BLAST of EMLSAG00000002982 vs. SwissProt
Analysis Date: 2017-02-10 (Blastp vs. SwissProt)
Total hits: 0
Match NameE-valueIdentityDescription
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BLAST of EMLSAG00000002982 vs. Select Arthropod Genomes
Analysis Date: 2017-02-20 (Blastp vs. Selected Arthropods)
Total hits: 0
Match NameE-valueIdentityDescription
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BLAST of EMLSAG00000002982 vs. nr
Analysis Date: 2017-02-20 (Blastp vs. NR (2/2017))
Total hits: 1
Match NameE-valueIdentityDescription
gi|290462093|gb|ADD24094.1|3.715e-1327.04protein ZK643.6 [Lepeophtheirus salmonis][more]
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BLAST of EMLSAG00000002982 vs. Tigriopus kingsejongenis genes
Analysis Date: 2018-04-18 (Blastp vs. Tigriopus kingsejongensis proteins)
Total hits: 0
Match NameE-valueIdentityDescription
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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
LSalAtl2s170supercontigLSalAtl2s170:193433..195225 +
Analyses
This gene is derived from or has results from the following analyses
Analysis NameDate Performed
ensembl2013-09-26 .965016
Blast vs. GO2014-04-02
TblastN vs C. finmarchicus TSA2014-05-09
Blastp vs. self2014-05-10
Blastp vs. SwissProt2017-02-10
Blastp vs. Selected Arthropods2017-02-20
Blastp vs. NR (2/2017)2017-02-20
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Properties
Property NameValue
Logic nameensemblgenomes
Descriptionmaker-LSalAtl2s170-augustus-gene-2.7
Biotypeprotein_coding
EvidenceIEA
Noteprotein ZK643.6 [Lepeophtheirus salmonis]
Cross References
External references for this gene
DatabaseAccession
Ensembl Metazoa (gene)EMLSAG00000002982 (primary cross-reference)
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameSpeciesType
EMLSAT00000002982EMLSAT00000002982-698829Lepeophtheirus salmonismRNA


Sequences
The following sequences are available for this feature:

gene from alignment at LSalAtl2s170:193433..195225+

Legend: mRNA
Hold the cursor over a type above to highlight its positions in the sequence below.
>EMLSAG00000002982-685748 ID=EMLSAG00000002982-685748|Name=EMLSAG00000002982|organism=Lepeophtheirus salmonis|type=gene|length=1793bp|location=Sequence derived from alignment at LSalAtl2s170:193433..195225+ (Lepeophtheirus salmonis)
GAAAAAATGAATATATTATTGATATATATATTACAGTAATGCCTTCAACT
CAAGTAAAAAAGTTTCCATCATGATTCAAGTGAGTAGACTTATCATTTTA
TCTTGCATCTTCATCGGAGCACTTGGAGGATTTGATAGTAAGTCACTAAT
GGGTTGAAGTAATTTTGAATGTTGTTAGACATGCTTCTTATTCATAGMTA
CATGTGCTGATAAAAGGAGAGATTGTAAAGCCGATAATGTCCTCTGCATG
CAACCCTATTACTATTTCCAATGCTCAAGAACTTGTGGATGCACAGGTAA
GCGCAATAATAATAGCACTATTCAACTACATATGATACTCGACTCTAGGG
GCTTGCAATGATCCTTCTGCTAGTTGTCTTGATGAATCCGGTGATTGCTT
TGAAACTCCTCTCATGAATAAATGTCCCCGATTCTGTGGAGTGTGTGAAG
GTAAAAATAACTCTTTAATAGGGCGGGCATTCATTTGAGCAAGGTTATTT
TCTTCGAGTGTCATCTTAATGAGATTCATTAGAGCAGAGATGTATTTGGA
ATATCTTAATTTGAGCAAGGTTGAGTTCAGCGACATTTTCATATAATATG
CATTAATAGATGAATGACATGAACATTAGACAAAAAAGAACAAGACACCA
CTAGCTTTTTTATCCACACTCAACCTCGACTGTCAAAAGGGAAATGACCT
ATTTGAAAAAAACAACATATGATAGCTAGTCTTTTGTATTTCTCTTGTTG
CCAACAGTGAGTTATTATTTACAGAATAGTTATAAATTATTATGTAGATT
GAATTGATAATCTTACTGTTGTGTCTTAACGAGGTTGAGGAGACACAAAG
GTGGAGAGATCCAGGACGACCGAGAGAAGTGAGGAGAAGGAAAGGCGTAG
AGGAATAATACAACACTTATTTAAAGGAACATCTGTATTCTTTAATACAA
AAACCTACTCTGCTACATACATAAAATATACTGAAAACGAGGTAAAAGAC
TGTACTTTACACACATATATATATACAAGAAAATAAGAGAAGAGAAGAAG
GGGGAAGAAAACACTAATACATTACACTTACCAATGATGTAACTATACAT
TTTATTAGTTGATACTTGCTAAAAATAACCTGTTTTAATAGATTTGCGAC
CTTATTTTAATTATTTTCTCATCGATAGGCTGCAATGACTTAGTTAAACA
AACAATATGTGCATTGAATGTTCATCGTTGCAACGAGTATAACGTACTTT
ACTTGTGTTCAAATACTTGTGGAAAGTGTCAAGGTAAGACTTTTTAAATA
ACTTGCTCAATAGCTTTGATATTAATGATAAATTATTCTTTGATAATTTC
AGAGCGTTGCAGAAATAAAATGGGTTCAGACTATGTGTGCGCTGCATTTA
ATGCTCGTGGATACTGTTACAGTACCAATAAACACTCTCGTGTGATGAGG
GATATTTGCTCTGCTACATGCACCTCAGGTTGTCGTATCAAAAACCTTCC
TTAAAGGAATCATCATACATCGCTATTATTATATAATCACGAATAATAGA
TTATTCGTCAAATATACTTAACTATTTGCATAACTGAATCATAATATGAT
TTAAGGGTCCTGGAATTATTTTTTGATATATAACTTACTAGAATTAGTAA
TTGGCATTATCCTGCATTGACTAACATATTAACATATTGCTTTATTAATA
TAGAAGATAACTCCCAGAGAAATCATCCGTGTTACCGTCCGATTTATATG
ATCACACTCACACCTAGCTACTCACTCAATACTTAGACGTTCT
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