EMLSAG00000006863, EMLSAG00000006863-689629 (gene) Lepeophtheirus salmonis
Overview
Associated RNAi Experiments
Nothing found Homology
BLAST of EMLSAG00000006863 vs. C. finmarchicus
Match: gi|592930973|gb|GAXK01027580.1| (TSA: Calanus finmarchicus comp5242904_c0_seq1 transcribed RNA sequence) HSP 1 Score: 59.6918 bits (143), Expect = 1.001e-10 Identity = 37/93 (39.78%), Postives = 53/93 (56.99%), Query Frame = 0 Query: 32 LPGND---LKCIEINGQCISTSS--TCNGKFVAYHCPGRDVCCVNIQAS--------ECDRHLIASEGNMYLDGYIPTSGSGVTIASGVDIGQ 111 LPG++ C ++ G C + SS T N V C G+ CCV+ + + D+HL EGN+ L+GY+PT+GSGVTIA+G D+G Sbjct: 60 LPGSEPTKQTCSQLGGTCKTLSSCYTTNSLVVRNKCQGKKYCCVDDPPNCPGKNIIEDMDKHLNEVEGNIMLEGYVPTNGSGVTIATGFDLGH 338
BLAST of EMLSAG00000006863 vs. C. finmarchicus
Match: gi|592882134|gb|GAXK01076209.1| (TSA: Calanus finmarchicus comp2448622_c0_seq1 transcribed RNA sequence) HSP 1 Score: 31.9574 bits (71), Expect = 1.118e+0 Identity = 11/30 (36.67%), Postives = 16/30 (53.33%), Query Frame = 0 Query: 125 FLKLEPYMAXAPGRPKNKAEVCGDSKINKN 154 F+ P+M RPK+K +C D +I N Sbjct: 472 FISFHPFMWSIS*RPKHKVSICSDRRIRNN 561
BLAST of EMLSAG00000006863 vs. C. finmarchicus
Match: gi|592816311|gb|GAXK01138257.1| (TSA: Calanus finmarchicus comp103065_c0_seq3 transcribed RNA sequence) HSP 1 Score: 31.5722 bits (70), Expect = 1.623e+0 Identity = 23/84 (27.38%), Postives = 34/84 (40.48%), Query Frame = 0 Query: 24 CVYHNRINLPGNDLKCIEINGQCISTSSTCNGKFVAYHCPGRDVCCVNIQASEC---DRHLIASEGNMYLDGYIPTSGSGVTIA 104 CVY N P +DLKC E+ + CP +D C+ + S C H ++S + +L + T S V A Sbjct: 2900 CVY---FNCPKSDLKCTEL---------------F*FSCPDQDFSCILFRTSSCICSHTHWLSSSPSRWLSTPLLTCTSSVLYA 3097
BLAST of EMLSAG00000006863 vs. C. finmarchicus
Match: gi|592816312|gb|GAXK01138256.1| (TSA: Calanus finmarchicus comp103065_c0_seq2 transcribed RNA sequence) HSP 1 Score: 31.5722 bits (70), Expect = 1.691e+0 Identity = 23/84 (27.38%), Postives = 34/84 (40.48%), Query Frame = 0 Query: 24 CVYHNRINLPGNDLKCIEINGQCISTSSTCNGKFVAYHCPGRDVCCVNIQASEC---DRHLIASEGNMYLDGYIPTSGSGVTIA 104 CVY N P +DLKC E+ + CP +D C+ + S C H ++S + +L + T S V A Sbjct: 6363 CVY---FNCPKSDLKCTEL---------------F*FSCPDQDFSCILFRTSSCICSHTHWLSSSPSRWLSTPLLTCTSSVLYA 6560
BLAST of EMLSAG00000006863 vs. C. finmarchicus
Match: gi|592816313|gb|GAXK01138255.1| (TSA: Calanus finmarchicus comp103065_c0_seq1 transcribed RNA sequence) HSP 1 Score: 31.5722 bits (70), Expect = 1.691e+0 Identity = 23/84 (27.38%), Postives = 34/84 (40.48%), Query Frame = 0 Query: 24 CVYHNRINLPGNDLKCIEINGQCISTSSTCNGKFVAYHCPGRDVCCVNIQASEC---DRHLIASEGNMYLDGYIPTSGSGVTIA 104 CVY N P +DLKC E+ + CP +D C+ + S C H ++S + +L + T S V A Sbjct: 6374 CVY---FNCPKSDLKCTEL---------------F*FSCPDQDFSCILFRTSSCICSHTHWLSSSPSRWLSTPLLTCTSSVLYA 6571
BLAST of EMLSAG00000006863 vs. C. finmarchicus
Match: gi|592847645|gb|GAXK01109899.1| (TSA: Calanus finmarchicus comp5339913_c0_seq1 transcribed RNA sequence) HSP 1 Score: 29.261 bits (64), Expect = 5.332e+0 Identity = 25/91 (27.47%), Postives = 44/91 (48.35%), Query Frame = 0 Query: 98 GSGVTIASGVDIGQRLPREYNGLDRDIFLKLEPYMA----XAPGRP--KNKAEVCGDSKINKNRLTLSVSEASGLDQFFKEIASNKNSEYT 182 GSGVTIA+G D+G + +++ +L+P+ A G+ K E ++ + +S++EA +D KE A ++YT Sbjct: 9 GSGVTIATGYDLGHGSVISDCLKNDELWDRLKPFKGIKNMSAIGKAGYSVKKEAAVGYTLDPDNPIISLNEARSIDCCLKEEAIKATNKYT 281
BLAST of EMLSAG00000006863 vs. C. finmarchicus
Match: gi|592918918|gb|GAXK01039457.1| (TSA: Calanus finmarchicus comp719785_c0_seq6 transcribed RNA sequence) HSP 1 Score: 29.261 bits (64), Expect = 7.500e+0 Identity = 17/49 (34.69%), Postives = 21/49 (42.86%), Query Frame = 0 Query: 5 YLRLFAIYVFGSLFTXSNGCVYHNRINLPGNDLKCIEINGQCISTSSTC 53 YL L + V G +F C IN+PGNDL +N T C Sbjct: 786 YLNLNELKVLG-IFDEEAPCEVWENINIPGNDLNIATVNEDDRDTWQEC 929
BLAST of EMLSAG00000006863 vs. C. finmarchicus
Match: gi|592918919|gb|GAXK01039456.1| (TSA: Calanus finmarchicus comp719785_c0_seq5 transcribed RNA sequence) HSP 1 Score: 29.261 bits (64), Expect = 8.853e+0 Identity = 17/49 (34.69%), Postives = 21/49 (42.86%), Query Frame = 0 Query: 5 YLRLFAIYVFGSLFTXSNGCVYHNRINLPGNDLKCIEINGQCISTSSTC 53 YL L + V G +F C IN+PGNDL +N T C Sbjct: 956 YLNLNELKVLG-IFDEEAPCEVWENINIPGNDLNIATVNEDDRDTWQEC 1099
BLAST of EMLSAG00000006863 vs. C. finmarchicus
Match: gi|592918921|gb|GAXK01039454.1| (TSA: Calanus finmarchicus comp719785_c0_seq3 transcribed RNA sequence) HSP 1 Score: 29.261 bits (64), Expect = 9.148e+0 Identity = 17/49 (34.69%), Postives = 21/49 (42.86%), Query Frame = 0 Query: 5 YLRLFAIYVFGSLFTXSNGCVYHNRINLPGNDLKCIEINGQCISTSSTC 53 YL L + V G +F C IN+PGNDL +N T C Sbjct: 786 YLNLNELKVLG-IFDEEAPCEVWENINIPGNDLNIATVNEDDRDTWQEC 929
BLAST of EMLSAG00000006863 vs. C. finmarchicus
Match: gi|592918920|gb|GAXK01039455.1| (TSA: Calanus finmarchicus comp719785_c0_seq4 transcribed RNA sequence) HSP 1 Score: 29.261 bits (64), Expect = 9.550e+0 Identity = 17/49 (34.69%), Postives = 21/49 (42.86%), Query Frame = 0 Query: 5 YLRLFAIYVFGSLFTXSNGCVYHNRINLPGNDLKCIEINGQCISTSSTC 53 YL L + V G +F C IN+PGNDL +N T C Sbjct: 786 YLNLNELKVLG-IFDEEAPCEVWENINIPGNDLNIATVNEDDRDTWQEC 929
BLAST of EMLSAG00000006863 vs. L. salmonis peptides
Match: EMLSAP00000006863 (pep:novel supercontig:LSalAtl2s:LSalAtl2s388:437926:439634:1 gene:EMLSAG00000006863 transcript:EMLSAT00000006863 description:"maker-LSalAtl2s388-augustus-gene-3.12") HSP 1 Score: 374.015 bits (959), Expect = 2.880e-133 Identity = 183/183 (100.00%), Postives = 183/183 (100.00%), Query Frame = 0 Query: 1 MKIVYLRLFAIYVFGSLFTXSNGCVYHNRINLPGNDLKCIEINGQCISTSSTCNGKFVAYHCPGRDVCCVNIQASECDRHLIASEGNMYLDGYIPTSGSGVTIASGVDIGQRLPREYNGLDRDIFLKLEPYMAXAPGRPKNKAEVCGDSKINKNRLTLSVSEASGLDQFFKEIASNKNSEYTK 183 MKIVYLRLFAIYVFGSLFTXSNGCVYHNRINLPGNDLKCIEINGQCISTSSTCNGKFVAYHCPGRDVCCVNIQASECDRHLIASEGNMYLDGYIPTSGSGVTIASGVDIGQRLPREYNGLDRDIFLKLEPYMAXAPGRPKNKAEVCGDSKINKNRLTLSVSEASGLDQFFKEIASNKNSEYTK Sbjct: 1 MKIVYLRLFAIYVFGSLFTXSNGCVYHNRINLPGNDLKCIEINGQCISTSSTCNGKFVAYHCPGRDVCCVNIQASECDRHLIASEGNMYLDGYIPTSGSGVTIASGVDIGQRLPREYNGLDRDIFLKLEPYMAXAPGRPKNKAEVCGDSKINKNRLTLSVSEASGLDQFFKEIASNKNSEYTK 183
BLAST of EMLSAG00000006863 vs. L. salmonis peptides
Match: EMLSAP00000006623 (pep:novel supercontig:LSalAtl2s:LSalAtl2s364:579060:580376:1 gene:EMLSAG00000006623 transcript:EMLSAT00000006623 description:"maker-LSalAtl2s364-augustus-gene-5.20") HSP 1 Score: 343.199 bits (879), Expect = 8.672e-120 Identity = 166/183 (90.71%), Postives = 172/183 (93.99%), Query Frame = 0 Query: 1 MKIVYLRLFAIYVFGSLFTXSNGCVYHNRINLPGNDLKCIEINGQCISTSSTCNGKFVAYHCPGRDVCCVNIQASECDRHLIASEGNMYLDGYIPTSGSGVTIASGVDIGQRLPREYNGLDRDIFLKLEPYMAXAPGRPKNKAEVCGDSKINKNRLTLSVSEASGLDQFFKEIASNKNSEYTK 183 MK+VYL LFAIY FGSLFT SN CVY++RI++P NDLKC INGQCISTSSTCNGKFVAYHCPGRDVCCVNIQASECDRHLIASEGNMYLDGYIPTSGSGVTIASGVDIGQRLPREYNGLDRDIF KLEPYMA APG+PKNKAEVC DSKINKNRLTLSVSEAS LDQFFKEIASNKNSEYTK Sbjct: 1 MKVVYLGLFAIYAFGSLFTPSNACVYNDRISVPQNDLKCRGINGQCISTSSTCNGKFVAYHCPGRDVCCVNIQASECDRHLIASEGNMYLDGYIPTSGSGVTIASGVDIGQRLPREYNGLDRDIFQKLEPYMATAPGKPKNKAEVCRDSKINKNRLTLSVSEASRLDQFFKEIASNKNSEYTK 183
BLAST of EMLSAG00000006863 vs. L. salmonis peptides
Match: EMLSAP00000006622 (pep:novel supercontig:LSalAtl2s:LSalAtl2s364:562329:563314:-1 gene:EMLSAG00000006622 transcript:EMLSAT00000006622 description:"maker-LSalAtl2s364-augustus-gene-5.24") HSP 1 Score: 323.939 bits (829), Expect = 2.624e-112 Identity = 160/183 (87.43%), Postives = 169/183 (92.35%), Query Frame = 0 Query: 1 MKIVYLRLFAIYVFGSLFTXSNGCVYHNRINLPGNDLKCIEINGQCISTSSTCNGKFVAYHCPGRDVCCVNIQASECDRHLIASEGNMYLDGYIPTSGSGVTIASGVDIGQRLPREYNGLDRDIFLKLEPYMAXAPGRPKNKAEVCGDSKINKNRLTLSVSEASGLDQFFKEIASNKNSEYTK 183 MKIV+ LFA++VFGSL SNGCVY+ RI++P NDLKC INGQCISTSSTCNGKFVAYHCPGRDVCCVNIQASECDRHLIASEGNMYLDGYIPTSGSGVTIASGVDIGQRLPREYNGLDRDIFLKLEPYMAXAPGRPKNKAEVC DSKIN+ RLTLSVS+A LDQFFK+IASNKNS YTK Sbjct: 1 MKIVHFGLFAVFVFGSL---SNGCVYNQRISVPRNDLKCRGINGQCISTSSTCNGKFVAYHCPGRDVCCVNIQASECDRHLIASEGNMYLDGYIPTSGSGVTIASGVDIGQRLPREYNGLDRDIFLKLEPYMAXAPGRPKNKAEVCRDSKINRIRLTLSVSQALRLDQFFKQIASNKNSAYTK 180
BLAST of EMLSAG00000006863 vs. L. salmonis peptides
Match: EMLSAP00000006624 (pep:novel supercontig:LSalAtl2s:LSalAtl2s364:596332:597435:1 gene:EMLSAG00000006624 transcript:EMLSAT00000006624 description:"maker-LSalAtl2s364-augustus-gene-6.35") HSP 1 Score: 303.908 bits (777), Expect = 2.165e-104 Identity = 145/183 (79.23%), Postives = 162/183 (88.52%), Query Frame = 0 Query: 1 MKIVYLRLFAIYVFGSLFTXSNGCVYHNRINLPGNDLKCIEINGQCISTSSTCNGKFVAYHCPGRDVCCVNIQASECDRHLIASEGNMYLDGYIPTSGSGVTIASGVDIGQRLPREYNGLDRDIFLKLEPYMAXAPGRPKNKAEVCGDSKINKNRLTLSVSEASGLDQFFKEIASNKNSEYTK 183 MK+VYL LFAIYVF SLFT SN CVY++RI++P NDLKC ING+C+S S CNGKFVAYHCPGRDVC VN+ +SECDRHL+ASEGNMY+ GYIPTSGSGVTIASGVDIGQRLP+EY+GLDRDIF KLEPYMA APG+PKNKAEVCGDS+IN RLT+SVSEA LDQFFK IASNK+SEY K Sbjct: 1 MKVVYLGLFAIYVFASLFTPSNACVYNDRISVPQNDLKCRGINGECVSKSYKCNGKFVAYHCPGRDVCFVNVASSECDRHLMASEGNMYIYGYIPTSGSGVTIASGVDIGQRLPQEYDGLDRDIFQKLEPYMATAPGKPKNKAEVCGDSRINTTRLTISVSEALRLDQFFKVIASNKSSEYKK 183
BLAST of EMLSAG00000006863 vs. Tigriopus kingsejongenis genes
Match: maker-scaffold488_size158317-snap-gene-0.22 (protein:Tk09350 transcript:maker-scaffold488_size158317-snap-gene-0.22-mRNA-1 annotation:"hypothetical protein") HSP 1 Score: 50.447 bits (119), Expect = 4.987e-8 Identity = 34/102 (33.33%), Postives = 51/102 (50.00%), Query Frame = 0 Query: 38 KCIEINGQCISTSSTCNGKFVAYHCPGRDV--CCVN--IQASECDRHLIASEGNMYLDGYIPTSGSGVTIASGVDIGQRLPREYNG--LDRDIFLKLEPYMA 133 +C + G C + C+ + CPG CC++ + +H+ EG +YL GYIP + SGVTIASGVD+GQ+ + + I K PY+ Sbjct: 126 QCASLGGSC-QMFTRCSSVSASGMCPGNSAQRCCLSNVVPTDVIKKHISDEEGGIYLTGYIPLN-SGVTIASGVDLGQQNENDLKSRKVPTSIIGKFRPYLG 225 The following BLAST results are available for this feature:
BLAST of EMLSAG00000006863 vs. GO
Analysis Date: 2014-04-02 (Blast vs. GO) Total hits: 0
BLAST of EMLSAG00000006863 vs. C. finmarchicus
Analysis Date: 2014-05-09 (TblastN vs C. finmarchicus TSA) Total hits: 10
BLAST of EMLSAG00000006863 vs. L. salmonis peptides
Analysis Date: 2014-05-10 (Blastp vs. self) Total hits: 4
BLAST of EMLSAG00000006863 vs. SwissProt
Analysis Date: 2017-02-10 (Blastp vs. SwissProt) Total hits: 0
BLAST of EMLSAG00000006863 vs. Select Arthropod Genomes
Analysis Date: 2017-02-20 (Blastp vs. Selected Arthropods) Total hits: 0
BLAST of EMLSAG00000006863 vs. nr
Analysis Date: 2017-02-20 (Blastp vs. NR (2/2017)) Total hits: 0
BLAST of EMLSAG00000006863 vs. Tigriopus kingsejongenis genes
Analysis Date: 2018-04-18 (Blastp vs. Tigriopus kingsejongensis proteins) Total hits: 1
Alignments
The following features are aligned
Analyses
This gene is derived from or has results from the following analyses
Properties
Cross References
External references for this gene
Relationships
The following mRNA feature(s) are a part of this gene:
Sequences
The following sequences are available for this feature:
gene from alignment at LSalAtl2s388:437926..439634+ Legend: mRNA Hold the cursor over a type above to highlight its positions in the sequence below.>EMLSAG00000006863-689629 ID=EMLSAG00000006863-689629|Name=EMLSAG00000006863|organism=Lepeophtheirus salmonis|type=gene|length=1709bp|location=Sequence derived from alignment at LSalAtl2s388:437926..439634+ (Lepeophtheirus salmonis)back to top Add to Basket
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