EMLSAG00000009368, EMLSAG00000009368-692134 (gene) Lepeophtheirus salmonis

Overview
NameEMLSAG00000009368
Unique NameEMLSAG00000009368-692134
Typegene
OrganismLepeophtheirus salmonis (salmon louse)
Associated RNAi Experiments

Nothing found

Homology
[Close]
BLAST of EMLSAG00000009368 vs. C. finmarchicus
Match: gi|592929112|gb|GAXK01029433.1| (TSA: Calanus finmarchicus comp151809_c2_seq2 transcribed RNA sequence)

HSP 1 Score: 50.8322 bits (120), Expect = 1.008e-7
Identity = 45/135 (33.33%), Postives = 55/135 (40.74%), Query Frame = 0 
Query:   10 LRCQLSESICSFSCLFGGYKTGLCIPNENGGKACVCVN--------EMLQESICQPDNEEKTSAYMCAGYCQVIGRQTGNCENNVCECSRERFYLSRDYLCVANEVCSMHCQIVRGGSNGKCSGPNNWDCECDYG 136
             RC      C+  C+  G  +GLC   ++ GK C C            L  S C   N       +C G C  +GR TG C    C CS E    S+  LC A   C M CQ  +G   G+C G   W CEC  G
Sbjct:   91 FRCTFGNWACTAGCVALGQTSGLC---DDAGK-CWCSESSISLNNFRALLPSRCNLGNA------VCEGTCHSLGRSTGTCGTYGCTCSDEFLTPSQFLLCAAASTCRMDCQ-AKGHGTGECLG---WACECRSG 453
[Close]
BLAST of EMLSAG00000009368 vs. C. finmarchicus
Match: gi|592929113|gb|GAXK01029432.1| (TSA: Calanus finmarchicus comp151809_c2_seq1 transcribed RNA sequence)

HSP 1 Score: 50.8322 bits (120), Expect = 2.029e-7
Identity = 45/135 (33.33%), Postives = 55/135 (40.74%), Query Frame = 0 
Query:   10 LRCQLSESICSFSCLFGGYKTGLCIPNENGGKACVCVN--------EMLQESICQPDNEEKTSAYMCAGYCQVIGRQTGNCENNVCECSRERFYLSRDYLCVANEVCSMHCQIVRGGSNGKCSGPNNWDCECDYG 136
             RC      C+  C+  G  +GLC   ++ GK C C            L  S C   N       +C G C  +GR TG C    C CS E    S+  LC A   C M CQ  +G   G+C G   W CEC  G
Sbjct:  361 FRCTFGNWACTAGCVALGQTSGLC---DDAGK-CWCSESSISLNNFRALLPSRCNLGNA------VCEGTCHSLGRSTGTCGTYGCTCSDEFLTPSQFLLCAAASTCRMDCQ-AKGHGTGECLG---WACECRSG 723
[Close]
BLAST of EMLSAG00000009368 vs. C. finmarchicus
Match: gi|592830758|gb|GAXK01126786.1| (TSA: Calanus finmarchicus comp47097_c0_seq1 transcribed RNA sequence)

HSP 1 Score: 49.6766 bits (117), Expect = 2.573e-7
Identity = 40/129 (31.01%), Postives = 55/129 (42.64%), Query Frame = 0 
Query:   10 LRCQLSESICSFSCLFGGYKTGLCIPNENGGKACVCVNEMLQESICQPDNEEK--TSAYMCAGYCQVIGRQTGNCENNVCECSRERFYLSRDYLCVANEVCSMHCQIVRGGSNGKCSGPNNWDCECDYG 136
             RC      C+  C+  G  +GLC   ++ GK C C    +  S  +     +      +C   C  +GR  G C+   CECS +    S+  LC A   C M CQ  +G   G+C G   W CEC  G
Sbjct:  109 FRCTFGNWACTAGCVMLGQTSGLC---DDAGK-CWCSERSIALSDFRALLPSRCDLGQAVCETTCHSLGRINGTCDKFGCECSDDFLTPSQFLLCAAASTCRMDCQ-AKGHGTGECLG---WSCECRSG 471
[Close]
BLAST of EMLSAG00000009368 vs. C. finmarchicus
Match: gi|592951770|gb|GAXK01006783.1| (TSA: Calanus finmarchicus comp69832_c1_seq3 transcribed RNA sequence)

HSP 1 Score: 46.595 bits (109), Expect = 4.528e-6
Identity = 43/131 (32.82%), Postives = 55/131 (41.98%), Query Frame = 0 
Query:   10 LRCQLSESICSFSCLFGGYKTGLCIPNENGGKACVCVN-----EMLQESICQPDNEEKTSAYMCAGYCQVIGRQTGNC--ENNVCECSRERFYLSRDYLCVANEVCSMHCQIVRGGSNGKCSGPNNWDCEC 133
             RC   E  CSFSC   G   G C  +      C C       E  QE +    +  +  A  C   C  IGR  G C  +N  C CS E        LC +  VC ++CQ  +G ++G C+G   W CEC
Sbjct:   97 FRCSFGEFACSFSCKVLGQSGGSCADD----GECFCSELPLNLENFQELL---PSRCQLGASFCDKTCHAIGRFNGTCNDDNTDCTCSDESVSAEEFALCASQSVCILNCQ-RKGKASGVCNG---WACEC 456
[Close]
BLAST of EMLSAG00000009368 vs. C. finmarchicus
Match: gi|592951771|gb|GAXK01006782.1| (TSA: Calanus finmarchicus comp69832_c1_seq2 transcribed RNA sequence)

HSP 1 Score: 46.595 bits (109), Expect = 4.804e-6
Identity = 43/131 (32.82%), Postives = 55/131 (41.98%), Query Frame = 0 
Query:   10 LRCQLSESICSFSCLFGGYKTGLCIPNENGGKACVCVN-----EMLQESICQPDNEEKTSAYMCAGYCQVIGRQTGNC--ENNVCECSRERFYLSRDYLCVANEVCSMHCQIVRGGSNGKCSGPNNWDCEC 133
             RC   E  CSFSC   G   G C  +      C C       E  QE +    +  +  A  C   C  IGR  G C  +N  C CS E        LC +  VC ++CQ  +G ++G C+G   W CEC
Sbjct:   97 FRCSFGEFACSFSCKVLGQSGGSCADD----GECFCSELPLNLENFQELL---PSRCQLGASFCDKTCHAIGRFNGTCNDDNTDCTCSDESVSAEEFALCASQSVCILNCQ-RKGKASGVCNG---WACEC 456
[Close]
BLAST of EMLSAG00000009368 vs. C. finmarchicus
Match: gi|592951772|gb|GAXK01006781.1| (TSA: Calanus finmarchicus comp69832_c1_seq1 transcribed RNA sequence)

HSP 1 Score: 46.595 bits (109), Expect = 6.348e-6
Identity = 43/131 (32.82%), Postives = 55/131 (41.98%), Query Frame = 0 
Query:   10 LRCQLSESICSFSCLFGGYKTGLCIPNENGGKACVCVN-----EMLQESICQPDNEEKTSAYMCAGYCQVIGRQTGNC--ENNVCECSRERFYLSRDYLCVANEVCSMHCQIVRGGSNGKCSGPNNWDCEC 133
             RC   E  CSFSC   G   G C  +      C C       E  QE +    +  +  A  C   C  IGR  G C  +N  C CS E        LC +  VC ++CQ  +G ++G C+G   W CEC
Sbjct:   97 FRCSFGEFACSFSCKVLGQSGGSCADD----GECFCSELPLNLENFQELL---PSRCQLGASFCDKTCHAIGRFNGTCNDDNTDCTCSDESVSAEEFALCASQSVCILNCQ-RKGKASGVCNG---WACEC 456
[Close]
BLAST of EMLSAG00000009368 vs. C. finmarchicus
Match: gi|592807447|gb|GAXK01147121.1| (TSA: Calanus finmarchicus comp42486_c1_seq1 transcribed RNA sequence)

HSP 1 Score: 39.2762 bits (90), Expect = 1.769e-3
Identity = 35/129 (27.13%), Postives = 56/129 (43.41%), Query Frame = 0 
Query:   10 LRCQLSESICSFSCLFGGYKTGLCIPNENGGKACVCVNEMLQESICQPDNEEKTSAYM--CAGYCQVIGRQTGNCENNV---CECSRERFYLSRDYLCVANEVCSMHCQIVRGGSNGKCSGPNNWDCEC 133
             RC L E  CS SC+  G  +G+C    +    C+C  + +  +  +     + +  +  C   C  +GR++G C       C+CS          LC A   C + CQ  +G + G+C G   W C+C
Sbjct:  149 FRCSLGELACSASCVTLGQTSGICDAEGD----CICSEKSISLNNFRNLLPSRCNLGLSFCQATCNALGRESGTCAATGATDCQCSENYISPKAFALCAAESTCRLDCQ-RQGLATGECFG---WSCKC 511
[Close]
BLAST of EMLSAG00000009368 vs. C. finmarchicus
Match: gi|592860806|gb|GAXK01096756.1| (TSA: Calanus finmarchicus comp55821_c0_seq1 transcribed RNA sequence)

HSP 1 Score: 33.4982 bits (75), Expect = 1.498e-1
Identity = 27/79 (34.18%), Postives = 33/79 (41.77%), Query Frame = 0 
Query:   11 RCQLSESICSFSCLFGGYKTGLCIPNENGGKACVCVNEMLQESICQPDNEEKTSAYMCAGYCQVIGRQTGNCENNVCEC 89
            RC L +S C  +C   G K G C   ++GG  C C  + L  S       E T    C   CQ  G  TG C    C+C
Sbjct:  177 RCNLGQSFCEVTCNSIGRKNGTCGTTDSGGSDCQCSEDYLSPSDFALCGAEST----CRLDCQRQGLATGECFGWSCKC 401

HSP 2 Score: 33.113 bits (74), Expect = 1.910e-1
Identity = 27/82 (32.93%), Postives = 37/82 (45.12%), Query Frame = 0 
Query:   67 MCAGYCQVIGRQTGNCEN-----NVCECSRERFYLSRDYLCVANEVCSMHCQIVRGGSNGKCSGPNNWDCECDYGFSHDDSM 143
             C   C  IGR+ G C       + C+CS +    S   LC A   C + CQ  +G + G+C G   W C+C    S DD+ 
Sbjct:  156 FCEVTCNSIGRKNGTCGTTDSGGSDCQCSEDYLSPSDFALCGAESTCRLDCQ-RQGLATGECFG---WSCKCQ---SKDDAT 380
[Close]
BLAST of EMLSAG00000009368 vs. C. finmarchicus
Match: gi|592923598|gb|GAXK01034817.1| (TSA: Calanus finmarchicus comp110495_c1_seq2 transcribed RNA sequence)

HSP 1 Score: 29.6462 bits (65), Expect = 3.491e+0
Identity = 20/85 (23.53%), Postives = 38/85 (44.71%), Query Frame = 0 
Query:   46 VNEMLQESICQPDNE----EKTSAYM---CAGYCQVIGRQTGNCENNVCECSRERFYLSRDYLCVANEVCSMHCQIVRGGSNGKC 123
            VN ++ E++CQP       E    ++    A +C    ++ G  +   C+   +   L  D+  +  ++   HC+IV+ G  G C
Sbjct:  171 VNFLMAETVCQPILRKIF*EVLVVFLNLQMASHC----KRAGIVQKVHCKIVGQALKLLMDHCMIEKQMLQDHCKIVKQGLMGHC 413
[Close]
BLAST of EMLSAG00000009368 vs. C. finmarchicus
Match: gi|592823726|gb|GAXK01130842.1| (TSA: Calanus finmarchicus comp179516_c1_seq2 transcribed RNA sequence)

HSP 1 Score: 28.8758 bits (63), Expect = 7.122e+0
Identity = 27/106 (25.47%), Postives = 42/106 (39.62%), Query Frame = 0 
Query:   13 QLSESICSFSCLFGGYKTGLCIPNENGGKACVCVNEMLQ------------------ESICQPDNEEKTSAYMCAGYCQVIGRQTGNCENN-VCECSRER-FYLSR 98
            QLS SI S +C +GG   G  +    GG+   C +   Q                  E+  QP N E+     C  +C     +   C+++ +CE  R   + L+R
Sbjct:   85 QLSASIHSAACGWGGQAAGRALLEHTGGEGGHCHHTGYQGHGWGQVVHRGDHILCKAETESQPGNSEQKDGQHCGEHCGWFPGE*EGCDHHLLCEGGRGWDWVLAR 402
[Close]
BLAST of EMLSAG00000009368 vs. L. salmonis peptides
Match: EMLSAP00000009368 (pep:novel supercontig:LSalAtl2s:LSalAtl2s599:336881:337404:-1 gene:EMLSAG00000009368 transcript:EMLSAT00000009368 description:"snap_masked-LSalAtl2s599-processed-gene-3.11")

HSP 1 Score: 308.916 bits (790), Expect = 1.164e-108
Identity = 151/151 (100.00%), Postives = 151/151 (100.00%), Query Frame = 0 
Query:    1 MQEESPSNHLRCQLSESICSFSCLFGGYKTGLCIPNENGGKACVCVNEMLQESICQPDNEEKTSAYMCAGYCQVIGRQTGNCENNVCECSRERFYLSRDYLCVANEVCSMHCQIVRGGSNGKCSGPNNWDCECDYGFSHDDSMSFNSTSSD 151
            MQEESPSNHLRCQLSESICSFSCLFGGYKTGLCIPNENGGKACVCVNEMLQESICQPDNEEKTSAYMCAGYCQVIGRQTGNCENNVCECSRERFYLSRDYLCVANEVCSMHCQIVRGGSNGKCSGPNNWDCECDYGFSHDDSMSFNSTSSD
Sbjct:    1 MQEESPSNHLRCQLSESICSFSCLFGGYKTGLCIPNENGGKACVCVNEMLQESICQPDNEEKTSAYMCAGYCQVIGRQTGNCENNVCECSRERFYLSRDYLCVANEVCSMHCQIVRGGSNGKCSGPNNWDCECDYGFSHDDSMSFNSTSSD 151
[Close]
BLAST of EMLSAG00000009368 vs. L. salmonis peptides
Match: EMLSAP00000009369 (pep:novel supercontig:LSalAtl2s:LSalAtl2s599:352791:354595:-1 gene:EMLSAG00000009369 transcript:EMLSAT00000009369 description:"maker-LSalAtl2s599-snap-gene-3.41")

HSP 1 Score: 109.383 bits (272), Expect = 2.436e-30
Identity = 53/135 (39.26%), Postives = 83/135 (61.48%), Query Frame = 0 
Query:    1 MQEESPSNHLRCQLSESICSFSCLFGGYKTGLCIPNENGGKACVCVNEMLQESICQPDNEEKTSAYMCAGYCQVIGRQTGNCE--NNVCECSRERFYLSRDYLCVANEVCSMHCQIVRGGSNGKCSGPNNWDCEC 133
            ++    ++ +RC L+ES+C ++C  GG+  G C P+ +GG +C+C  E L++ +C  D   + +    AG+CQ  GRQ+GNC+   N C C++E   LS    C+ +EVCS+ CQ     +NG+C GPN WDC+C
Sbjct:   32 LKRVKRNDLVRCGLTESVCKWTCRLGGHSGGFCSPDADGGSSCICSEEDLEKYVCGGDVGPEIAGXSXAGFCQAKGRQSGNCDLIKNECACTKEYLQLSH-IKCINDEVCSVFCQYKERKANGRCEGPNKWDCKC 165
[Close]
BLAST of EMLSAG00000009368 vs. L. salmonis peptides
Match: EMLSAP00000009367 (pep:novel supercontig:LSalAtl2s:LSalAtl2s599:333271:333800:-1 gene:EMLSAG00000009367 transcript:EMLSAT00000009367 description:"augustus_masked-LSalAtl2s599-processed-gene-3.3")

HSP 1 Score: 78.1814 bits (191), Expect = 9.829e-19
Identity = 54/147 (36.73%), Postives = 74/147 (50.34%), Query Frame = 0 
Query:    6 PSNH-LRCQLSESICSFSCLFGGYKTGLCIPNENGGKACVCVNEMLQESICQPDNEEKTSAYMCAGYCQVIGRQTGNC--ENNVCECSRERFYLSRDYLCVANEVCSMHCQIVRGGSNGKCSGPN-NWDCECDYGFSHDDSMSFNST 148
            P+N  + C  S  IC +SC FG    G C+  E+G + C C     Q++IC      + +   C  +CQ IGR  G C  +N+ C CS  R       LCV +EVCS+ C+  RG S G+C+G     +CEC   FS    +S  ST
Sbjct:   12 PNNRRISCDQSPIICEWSCAFGVNTGGTCLKVESGRRECFCYETNAQKTICAGYFRPENAGRACKTFCQSIGRIGGECMADNHDCICSTSRIPYFYRSLCVTDEVCSVFCKTYRGLSGGQCTGXGITKECEC---FSRRSPLSVIST 155
[Close]
BLAST of EMLSAG00000009368 vs. L. salmonis peptides
Match: EMLSAP00000009525 (pep:novel supercontig:LSalAtl2s:LSalAtl2s612:448569:453649:-1 gene:EMLSAG00000009525 transcript:EMLSAT00000009525 description:"augustus_masked-LSalAtl2s612-processed-gene-4.2")

HSP 1 Score: 54.299 bits (129), Expect = 1.306e-10
Identity = 23/60 (38.33%), Postives = 37/60 (61.67%), Query Frame = 0 
Query:    7 SNHLRCQLSESICSFSCLFGGYKTGLCIPNENGGKACVCVNEMLQESICQPDNEEKTSAY 66
            S+ +RC +SESIC ++C  GG+ +G C P  +GG  C+C +E L + +C  D +   + Y
Sbjct:   28 SDVVRCGISESICKWTCRIGGHSSGFCSPGPDGGSDCICSDEDLDKYLCGGDVDPDIAGY 87
[Close]
BLAST of EMLSAG00000009368 vs. L. salmonis peptides
Match: EMLSAP00000003955 (pep:novel supercontig:LSalAtl2s:LSalAtl2s211:994215:1002048:1 gene:EMLSAG00000003955 transcript:EMLSAT00000003955 description:"augustus_masked-LSalAtl2s211-processed-gene-10.7")

HSP 1 Score: 45.4394 bits (106), Expect = 7.530e-7
Identity = 25/64 (39.06%), Postives = 35/64 (54.69%), Query Frame = 0 
Query:   72 CQVIGRQTGNC--ENNVCECSRERFYLSRDYLCVANEVCSMHCQIVRGGSNGKCSGPNNWDCEC 133
            CQ +GR+ G C  +N  C+C  E     +  LCV + +C + CQ  +G + GKC G   WDC C
Sbjct:  104 CQAVGRRNGVCNSDNTDCDCDDEFVSPRQWALCVEDAICRVDCQ-RKGYARGKCEGEFGWDCNC 166
[Close]
BLAST of EMLSAG00000009368 vs. Tigriopus kingsejongenis genes
Match: maker-scaffold508_size152036-snap-gene-0.17 (protein:Tk11405 transcript:maker-scaffold508_size152036-snap-gene-0.17-mRNA-1 annotation:"hypothetical protein H257_02733")

HSP 1 Score: 70.0922 bits (170), Expect = 4.356e-16
Identity = 45/129 (34.88%), Postives = 66/129 (51.16%), Query Frame = 0 
Query:    8 NHLRCQ-LSESICSFSCLFGGYKTGLCIPNENGGKACVCVNEMLQESICQPDNEEKTSAYMCAGYCQVIGRQTGNCE--NNVCECSRERFYLSRDYLCVANEVCSMHCQIVRGGSNGKCSGPNNWDCEC 133
            + +RC+  S   C +SC   G+  G C    +    C C  E L   +C  +  E T+  +CAG+CQ  G QTG+C+  N  C+C+      +R   C+  E CS++CQ  R  S G C G N+W+C C
Sbjct:   32 DRIRCRTFSGLFCRWSCRLLGHSGGSC----DADNECRCSEEDLDRYVCGGNVTETTANNLCAGWCQFRGLQTGDCDFTNGECQCTENDKLATRHIKCINEEACSIYCQFKR-KSAGFCGGTNDWECIC 155
[Close]
BLAST of EMLSAG00000009368 vs. Tigriopus kingsejongenis genes
Match: maker-scaffold365_size194585-snap-gene-0.23 (protein:Tk02274 transcript:maker-scaffold365_size194585-snap-gene-0.23-mRNA-1 annotation:"hypothetical protein PHYSODRAFT_302006")

HSP 1 Score: 56.9954 bits (136), Expect = 1.098e-10
Identity = 29/69 (42.03%), Postives = 40/69 (57.97%), Query Frame = 0 
Query:   67 MCAGYCQVIGRQTGNCENNV--CECSRERFYLSRDYLCVANEVCSMHCQIVRGGSNGKCSGPNNWDCEC 133
             CAG C  IGR+ G C  +   C+CS E     +  LC+ + +CS+ CQ   G + G+C GP+NWDC C
Sbjct:  150 FCAGSCHTIGRKDGKCNEDFSDCKCSDEVVTPKQYSLCLDDGICSLVCQ-RDGSARGECLGPDNWDCRC 217
[Close]
BLAST of EMLSAG00000009368 vs. Tigriopus kingsejongenis genes
Match: maker-scaffold231_size243715-snap-gene-1.45 (protein:Tk10030 transcript:maker-scaffold231_size243715-snap-gene-1.45-mRNA-1 annotation:"laminin subunit beta- partial")

HSP 1 Score: 50.8322 bits (120), Expect = 1.194e-8
Identity = 27/69 (39.13%), Postives = 37/69 (53.62%), Query Frame = 0 
Query:   67 MCAGYCQVIGRQTGNCENNV--CECSRERFYLSRDYLCVANEVCSMHCQIVRGGSNGKCSGPNNWDCEC 133
             C   C  IGR TG C  +   CECS +     +  LC+ + VCS++CQ  +G + G C GP  W+C C
Sbjct:  121 FCEASCHGIGRVTGKCSADFSDCECSPDTVAAEQYALCLDDGVCSLYCQ-RQGSARGHCKGPTGWECRC 188
The following BLAST results are available for this feature:
BLAST of EMLSAG00000009368 vs. GO
Analysis Date: 2014-04-02 (Blast vs. GO)
Total hits: 0
Match NameE-valueIdentityDescription
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BLAST of EMLSAG00000009368 vs. C. finmarchicus
Analysis Date: 2014-05-09 (TblastN vs C. finmarchicus TSA)
Total hits: 12
Match NameE-valueIdentityDescription
gi|592929112|gb|GAXK01029433.1|1.008e-733.33TSA: Calanus finmarchicus comp151809_c2_seq2 trans... [more]
gi|592929113|gb|GAXK01029432.1|2.029e-733.33TSA: Calanus finmarchicus comp151809_c2_seq1 trans... [more]
gi|592830758|gb|GAXK01126786.1|2.573e-731.01TSA: Calanus finmarchicus comp47097_c0_seq1 transc... [more]
gi|592951770|gb|GAXK01006783.1|4.528e-632.82TSA: Calanus finmarchicus comp69832_c1_seq3 transc... [more]
gi|592951771|gb|GAXK01006782.1|4.804e-632.82TSA: Calanus finmarchicus comp69832_c1_seq2 transc... [more]
gi|592951772|gb|GAXK01006781.1|6.348e-632.82TSA: Calanus finmarchicus comp69832_c1_seq1 transc... [more]
gi|592807447|gb|GAXK01147121.1|1.769e-327.13TSA: Calanus finmarchicus comp42486_c1_seq1 transc... [more]
gi|592860806|gb|GAXK01096756.1|1.498e-134.18TSA: Calanus finmarchicus comp55821_c0_seq1 transc... [more]
gi|592923598|gb|GAXK01034817.1|3.491e+023.53TSA: Calanus finmarchicus comp110495_c1_seq2 trans... [more]
gi|592823726|gb|GAXK01130842.1|7.122e+025.47TSA: Calanus finmarchicus comp179516_c1_seq2 trans... [more]

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BLAST of EMLSAG00000009368 vs. L. salmonis peptides
Analysis Date: 2014-05-10 (Blastp vs. self)
Total hits: 5
Match NameE-valueIdentityDescription
EMLSAP000000093681.164e-108100.00pep:novel supercontig:LSalAtl2s:LSalAtl2s599:33688... [more]
EMLSAP000000093692.436e-3039.26pep:novel supercontig:LSalAtl2s:LSalAtl2s599:35279... [more]
EMLSAP000000093679.829e-1936.73pep:novel supercontig:LSalAtl2s:LSalAtl2s599:33327... [more]
EMLSAP000000095251.306e-1038.33pep:novel supercontig:LSalAtl2s:LSalAtl2s612:44856... [more]
EMLSAP000000039557.530e-739.06pep:novel supercontig:LSalAtl2s:LSalAtl2s211:99421... [more]
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BLAST of EMLSAG00000009368 vs. SwissProt
Analysis Date: 2017-02-10 (Blastp vs. SwissProt)
Total hits: 0
Match NameE-valueIdentityDescription
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BLAST of EMLSAG00000009368 vs. Select Arthropod Genomes
Analysis Date: 2017-02-20 (Blastp vs. Selected Arthropods)
Total hits: 0
Match NameE-valueIdentityDescription
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BLAST of EMLSAG00000009368 vs. nr
Analysis Date: 2017-02-20 (Blastp vs. NR (2/2017))
Total hits: 0
Match NameE-valueIdentityDescription
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BLAST of EMLSAG00000009368 vs. Tigriopus kingsejongenis genes
Analysis Date: 2018-04-18 (Blastp vs. Tigriopus kingsejongensis proteins)
Total hits: 3
Match NameE-valueIdentityDescription
maker-scaffold508_size152036-snap-gene-0.174.356e-1634.88protein:Tk11405 transcript:maker-scaffold508_size1... [more]
maker-scaffold365_size194585-snap-gene-0.231.098e-1042.03protein:Tk02274 transcript:maker-scaffold365_size1... [more]
maker-scaffold231_size243715-snap-gene-1.451.194e-839.13protein:Tk10030 transcript:maker-scaffold231_size2... [more]
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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
LSalAtl2s599supercontigLSalAtl2s599:336881..337404 -
Analyses
This gene is derived from or has results from the following analyses
Analysis NameDate Performed
ensembl2013-09-26 .965016
Blast vs. GO2014-04-02
TblastN vs C. finmarchicus TSA2014-05-09
Blastp vs. self2014-05-10
Blastp vs. SwissProt2017-02-10
Blastp vs. Selected Arthropods2017-02-20
Blastp vs. NR (2/2017)2017-02-20
Blastp vs. Tigriopus kingsejongensis proteins2018-04-18
Properties
Property NameValue
Logic nameensemblgenomes
Descriptionsnap_masked-LSalAtl2s599-processed-gene-3.11
Biotypeprotein_coding
EvidenceIEA
NoteHypothetical protein
Cross References
External references for this gene
DatabaseAccession
Ensembl Metazoa (gene)EMLSAG00000009368 (primary cross-reference)
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameSpeciesType
EMLSAT00000009368EMLSAT00000009368-705215Lepeophtheirus salmonismRNA


Sequences
The following sequences are available for this feature:

gene from alignment at LSalAtl2s599:336881..337404-

Legend: mRNA
Hold the cursor over a type above to highlight its positions in the sequence below.
>EMLSAG00000009368-692134 ID=EMLSAG00000009368-692134|Name=EMLSAG00000009368|organism=Lepeophtheirus salmonis|type=gene|length=524bp|location=Sequence derived from alignment at LSalAtl2s599:336881..337404- (Lepeophtheirus salmonis)
ATGCAGGAGGAAAGCCCAAGTAACCATCTCCGTTGTCAGTTATCAGAGAG
TATTTGTTCATTCTCATGCCTTTTTGGAGGATATAAAACTGGTCTTTGCA
TTCCTAATGAAAACGGGGGAAAAGCTTGCGTTTGCGTTAACGAAATGTTG
CAAGAGTCCATTTGTCAACCAGATAATGAAGAAAAAACTTCTGCTTATAT
GTGTGCTGGCTATTGCCAAGTCATTGGAAGGCAAACAGGTTTGTTAATTG
GCTTAACAAACATACATCATAATATTTAAAAACGCATTTTCCATTTTGTT
TTATAGGTAATTGTGAGAATAACGTTTGCGAATGCTCAAGAGAAAGATTT
TATTTGAGTCGTGATTATCTTTGTGTTGCTAATGAAGTTTGCTCCATGCA
TTGTCAAATCGTACGAGGAGGAAGCAACGGAAAATGCTCTGGTCCAAATA
ATTGGGATTGTGAATGTGACTATGGATTCTCTCACGATGATTCTATGAGC
TTTAACTCTACTTCTAGCGATTGA
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