EMLSAG00000012262, EMLSAG00000012262-695028 (gene) Lepeophtheirus salmonis

Overview


Name	EMLSAG00000012262
Unique Name	EMLSAG00000012262-695028
Type	gene
Organism	Lepeophtheirus salmonis (salmon louse)

Associated RNAi Experiments

Table of all RNA interference experiments conducted using this feature, grouped by Phenotype CV: female reproduction, no spermatophore
Gallery Image	Title	Gene or target symbol	Sex/Stage	Phenotype	Date
	AA F222		both PreAdult1 female PreAdult2 male	-Missing- female reproduction, no spermatophore	08.09.2015 - 14:29 15.10.2015 - 00:00

Table of all RNA interference experiments conducted using this feature, grouped by Phenotype CV: -Missing-
Gallery Image	Title	Gene or target symbol	Sex/Stage	Phenotype	Date
	Nauplii I 12262+22100+4547+12296+12453+9341		unknown Nauplius1	-Missing- -Missing-	01.02.2016 - 14:32 10.02.2016 - 01:36

Table of all RNA interference experiments conducted using this feature, grouped by Phenotype CV: reproduction
Gallery Image	Title	Gene or target symbol	Sex/Stage	Phenotype	Date
	Nauplii I 12262+22100+4547+12296+12453		unknown Nauplius I	reproductive defect as adults reproduction	01.02.2016 - 14:42 10.02.2016 - 01:43

Homology

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BLAST of EMLSAG00000012262 vs. GO
Match: - (symbol:Grik2 "Glutamate receptor ionotropic, kainate 2" species:10116 "Rattus norvegicus" [GO:0001662 "behavioral fear response" evidence=IEA] [GO:0004970 "ionotropic glutamate receptor activity" evidence=IEA] [GO:0005234 "extracellular-glutamate-gated ion channel activity" evidence=IEA] [GO:0006874 "cellular calcium ion homeostasis" evidence=IEA] [GO:0006886 "intracellular protein transport" evidence=IEA] [GO:0019228 "neuronal action potential" evidence=IEA] [GO:0030054 "cell junction" evidence=IEA] [GO:0032983 "kainate selective glutamate receptor complex" evidence=IEA] [GO:0035249 "synaptic transmission, glutamatergic" evidence=IEA] [GO:0042734 "presynaptic membrane" evidence=IEA] [GO:0043025 "neuronal cell body" evidence=IEA] [GO:0043524 "negative regulation of neuron apoptotic process" evidence=IEA] [GO:0045211 "postsynaptic membrane" evidence=IEA] [GO:0048169 "regulation of long-term neuronal synaptic plasticity" evidence=IEA] [GO:0048172 "regulation of short-term neuronal synaptic plasticity" evidence=IEA] [GO:0050806 "positive regulation of synaptic transmission" evidence=IEA] [GO:0051967 "negative regulation of synaptic transmission, glutamatergic" evidence=IEA] [GO:0060079 "regulation of excitatory postsynaptic membrane potential" evidence=IEA] [GO:0060080 "regulation of inhibitory postsynaptic membrane potential" evidence=IEA] InterPro:IPR001320 InterPro:IPR001508 InterPro:IPR019594 Pfam:PF00060 Pfam:PF10613 PRINTS:PR00177 SMART:SM00079 SMART:SM00918 Pfam:PF01094 RGD:2733 GO:GO:0006886 GO:GO:0001662 GO:GO:0051967 GO:GO:0043025 GO:GO:0030054 GO:GO:0045211 GO:GO:0034220 GO:GO:0060079 GO:GO:0042734 GO:GO:0060080 GO:GO:0043524 GO:GO:0035249 GO:GO:0006874 GO:GO:0019228 InterPro:IPR028082 SUPFAM:SSF53822 GO:GO:0048169 InterPro:IPR001828 GO:GO:0048172 GO:GO:0050806 GO:GO:0005234 GO:GO:0004970 GO:GO:0032983 GeneTree:ENSGT00740000114953 OMA:VNGQWNG OrthoDB:EOG71G9W6 EMBL:AABR06102102 EMBL:AABR06102103 EMBL:AABR06102104 EMBL:AABR06102105 EMBL:AABR06102106 EMBL:AABR06102107 EMBL:AABR06102108 EMBL:AABR06102109 EMBL:AABR06102110 EMBL:AABR06102111 EMBL:AABR06102112 EMBL:AABR06102113 EMBL:AABR06102114 EMBL:AABR06102115 Ensembl:ENSRNOT00000037559 NextBio:35582474 Uniprot:F1M855)

HSP 1 Score: 56.9954 bits (136), Expect = 3.692e-7
Identity = 78/392 (19.90%), Postives = 162/392 (41.33%), Query Frame = 0

Query:  174 MIQIIAQKIGFDFEI--VPYVEWGGYSEANNNWTGITKNMV------YMGPFDV-----------KEFVT----IVCPRPRPL-PKINNIIIPFSKNVWIGTFFSYFIVGGILSLVSCI-----YKSWRIHPEIKPAEKPLKWISRFEVSYGIPFGEGVPNKWIGPYSAFSIILTFWQLMAMVLILSYTCNLRSYLIVNPYERPIDSLEEL----KVSNYQFVVGLYEQIYAFADPYLRESMHYFL--ERDRLIIKDSQIFLPDVVKPDQCSVQHSTSSYYMNYKSVKKDGIPQFHVAQ-VPFNSPFVSWYFKKPNLISTKMRENVARVMDSGMAMRFYKDNVPPLYKVKEESKIEAQSLDEVIILFIFLAGISAVSVLLLIFEITLTSTKN 529
            +++ ++  +GF +EI  V   ++G   + N  W G+ + ++       + P  +           K F+T    I+  +P    P + + + P S ++W+    +Y  V  +L +++       Y     +P+    E     ++ F    G    +G  ++ +    +  I+   W    +++I SYT NL ++L V   E PIDS ++L    K+       G     +  +     + M  F+   R  +++K ++  +  V+  D   +  ST+  ++  ++     I     ++     +P  S Y  K  +   +++E     M   M  ++++ N  P  + KE S +  Q++  +   FI LA    +SV + + E    S KN
Sbjct:  430 LLRELSTILGFTYEIRLVEDGKYGAQDDVNGQWNGMVRELIDHKADLAVAPLAITYVREKVIDFSKPFMTLGISILYRKPNGTNPGVFSFLNPLSPDIWMYILLAYLGVSCVLFVIARFSPYEWYNPHPCNPDSDVVENNFTLLNSFWFGVGALMQQG--SELMPKALSTRIVGGIWWFFTLIIISSYTANLAAFLTVERMESPIDSADDLAKQTKIEYGAVEDGATMTFFKKSKISTYDKMWAFMSSRRQSVLVKSNEEGIQRVLTSDYAFLMESTTIEFVTQRNCNLTQIGGLIDSKGYGVGTPMGSPYRDKITIAILQLQEEGKLHM---MKEKWWRGNGCPEEESKEASALGVQNIGGI---FIVLAAGLVLSVFVAVGEFLYKSKKN 813

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BLAST of EMLSAG00000012262 vs. GO
Match: - (symbol:GRIK2 "Glutamate receptor ionotropic, kainate 2" species:9541 "Macaca fascicularis" [GO:0030424 "axon" evidence=IDA] [GO:0043197 "dendritic spine" evidence=IDA] InterPro:IPR001320 InterPro:IPR001508 InterPro:IPR019594 Pfam:PF00060 Pfam:PF10613 PRINTS:PR00177 SMART:SM00079 SMART:SM00918 Pfam:PF01094 GO:GO:0016021 GO:GO:0030424 GO:GO:0030054 GO:GO:0045211 GO:GO:0034220 GO:GO:0043197 GO:GO:0035235 InterPro:IPR028082 SUPFAM:SSF53822 InterPro:IPR001828 GO:GO:0005234 GO:GO:0004970 HOVERGEN:HBG051839 EMBL:DQ159934 ProteinModelPortal:Q38PU3 SMR:Q38PU3 Uniprot:Q38PU3)

HSP 1 Score: 56.225 bits (134), Expect = 6.269e-7
Identity = 78/392 (19.90%), Postives = 162/392 (41.33%), Query Frame = 0

Query:  174 MIQIIAQKIGFDFEI--VPYVEWGGYSEANNNWTGITKNMV------YMGPFDV-----------KEFVT----IVCPRPRPL-PKINNIIIPFSKNVWIGTFFSYFIVGGILSLVSCI-----YKSWRIHPEIKPAEKPLKWISRFEVSYGIPFGEGVPNKWIGPYSAFSIILTFWQLMAMVLILSYTCNLRSYLIVNPYERPIDSLEEL----KVSNYQFVVGLYEQIYAFADPYLRESMHYFL--ERDRLIIKDSQIFLPDVVKPDQCSVQHSTSSYYMNYKSVKKDGIPQFHVAQ-VPFNSPFVSWYFKKPNLISTKMRENVARVMDSGMAMRFYKDNVPPLYKVKEESKIEAQSLDEVIILFIFLAGISAVSVLLLIFEITLTSTKN 529
            +++ ++  +GF +EI  V   ++G   +AN  W G+ + ++       + P  +           K F+T    I+  +P    P + + + P S ++W+    +   V  +L +++       Y     +P+    E     ++ F    G    +G  ++ +    +  I+   W    +++I SYT NL ++L V   E PIDS ++L    K+       G     +  +     + M  F+   R  +++K ++  +  V+  D   +  ST+  ++  ++     I     ++     +P  S Y  K  +   +++E     M   M  ++++ N  P  + KE S +  Q++  +   FI LA    +SV + + E    S KN
Sbjct:  466 LLRELSTILGFTYEIRLVEDGKYGAQDDANGQWNGMVRELIDHKADLAVAPLAITYVREKVIDFSKPFMTLGISILYRKPNGTNPGVFSFLNPLSPDIWMYVLLACLGVSCVLFVIARFSPYEWYNPHPCNPDSDVVENNFTLLNSFWFGVGALMRQG--SELMPKALSTRIVGGIWWFFTLIIISSYTANLAAFLTVERMESPIDSADDLAKQTKIEYGAVEDGATMTFFKKSKISTYDKMWAFMSSRRQSVLVKSNEEGIQRVLTSDYAFLMESTTIEFVTQRNCNLTQIGGLIDSKGYGVGTPMGSPYRDKITIAILQLQEEGKLHM---MKEKWWRGNGCPEEESKEASALGVQNIGGI---FIVLAAGLVLSVFVAVGEFLYKSKKN 849

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BLAST of EMLSAG00000012262 vs. GO
Match: - (symbol:gria4b "glutamate receptor, ionotropic, AMPA 4b" species:7955 "Danio rerio" [GO:0004872 "receptor activity" evidence=IEA] [GO:0005216 "ion channel activity" evidence=IEA] [GO:0005234 "extracellular-glutamate-gated ion channel activity" evidence=IEA] [GO:0016020 "membrane" evidence=IEA] [GO:0004970 "ionotropic glutamate receptor activity" evidence=IEA] [GO:0006811 "ion transport" evidence=IEA] [GO:0045211 "postsynaptic membrane" evidence=IEA] [GO:0030054 "cell junction" evidence=IEA] [GO:0005886 "plasma membrane" evidence=IEA] [GO:0045202 "synapse" evidence=IEA] [GO:0006810 "transport" evidence=IEA] [GO:0016021 "integral component of membrane" evidence=IEA] InterPro:IPR001320 InterPro:IPR001508 InterPro:IPR019594 Pfam:PF00060 Pfam:PF10613 PRINTS:PR00177 SMART:SM00079 SMART:SM00918 Pfam:PF01094 ZFIN:ZDB-GENE-030131-8013 GO:GO:0016021 GO:GO:0030054 GO:GO:0045211 GO:GO:0034220 GO:GO:0035235 InterPro:IPR028082 SUPFAM:SSF53822 InterPro:IPR001828 GO:GO:0005234 GO:GO:0004970 HOVERGEN:HBG051839 KO:K05200 EMBL:AF525748 RefSeq:NP_997917.1 UniGene:Dr.81140 ProteinModelPortal:Q71E58 SMR:Q71E58 STRING:7955.ENSDARP00000042082 GeneID:336069 KEGG:dre:336069 CTD:336069 InParanoid:Q71E58 NextBio:20811163 Uniprot:Q71E58)

HSP 1 Score: 54.299 bits (129), Expect = 2.568e-6
Identity = 69/283 (24.38%), Postives = 116/283 (40.99%), Query Frame = 0

Query:  123 GLNKIGYWNNYGNYIVYQD------PRYSLNIYSVCCDVLDSGPIRM-----GVLPPEEEHP-----MIQIIAQKIGFDFEI--VPYVEWGGYSEANNNWTGITKNMVY------MGPFDV-----------KEF----VTIVCPRP-RPLPKINNIIIPFSKNVWIGTFFSYFIVGGILSLVSCI--YKSWRIHPEIK----PAEKPLKWISRFE---VSYGIPFGEGVPNKWIGPYS-AFSIILTFWQLMAMVLILSYTCNLRSYLIVNPYERPIDSLEEL 355
            G  +IGYWN+    ++ QD        Y +   +V    +  GP  M      +    E++      +   IA+ IGF ++I  VP  ++G        W G+   +VY      + P  +           K F    ++I+  +P +  P + + + P +  +W+   F+Y  V  +L LVS    Y+     PE      P+++P      F     S G    +G     I P S +  I+   W    +++I SYT NL ++L V     PI+S E+L
Sbjct:  383 GPRRIGYWNDADKLVLTQDHALLPNETYGMENRTVIVTTIMEGPYVMLKKNWEMYEGNEQYEGYCVDLASEIAKHIGFKYKISIVPDGKYGARDPETKIWNGMVGELVYGKAEIAVAPLTITLVREEVIDFSKPFMSLGISIMIKKPQKSKPGVFSFLDPLAYEIWMCIVFAYIGVSVVLFLVSRFSPYEWHTEEPEEGTDGLPSDQPPNEFGIFNSLWFSLGAFMQQGCD---ISPRSLSGRIVGGVWWFFTLIIISSYTANLAAFLTVERMVSPIESAEDL 662

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BLAST of EMLSAG00000012262 vs. GO
Match: - (symbol:GRIK3 "Glutamate receptor ionotropic, kainate 3" species:9606 "Homo sapiens" [GO:0004970 "ionotropic glutamate receptor activity" evidence=IEA] [GO:0005234 "extracellular-glutamate-gated ion channel activity" evidence=IEA] [GO:0016021 "integral component of membrane" evidence=IEA] [GO:0030054 "cell junction" evidence=IEA] [GO:0045211 "postsynaptic membrane" evidence=IEA] InterPro:IPR001320 InterPro:IPR001508 InterPro:IPR019594 Pfam:PF00060 Pfam:PF10613 PRINTS:PR00177 SMART:SM00079 SMART:SM00918 Pfam:PF01094 GO:GO:0016021 EMBL:CH471059 GO:GO:0030054 GO:GO:0045211 GO:GO:0034220 GO:GO:0035235 InterPro:IPR028082 SUPFAM:SSF53822 InterPro:IPR001828 GO:GO:0005234 GO:GO:0004970 HOGENOM:HOG000234371 HOVERGEN:HBG051839 EMBL:AL355386 EMBL:AC117945 RefSeq:NP_000822.2 UniGene:Hs.128848 DNASU:2899 GeneID:2899 KEGG:hsa:2899 CTD:2899 HGNC:HGNC:4581 PharmGKB:PA28975 KO:K05203 GenomeRNAi:2899 NextBio:11475 EMBL:AL591883 EMBL:AJ249210 ProteinModelPortal:A9Z1Z8 SMR:A9Z1Z8 PRIDE:A9Z1Z8 Ensembl:ENST00000373093 UCSC:uc001cba.1 ArrayExpress:A9Z1Z8 Uniprot:A9Z1Z8)

HSP 1 Score: 52.373 bits (124), Expect = 8.925e-6
Identity = 103/497 (20.72%), Postives = 193/497 (38.83%), Query Frame = 0

Query:   89 LKTSQNRLLTPVILFSPTSN--GDVQLSIWCPHCGTGLNKIGYWNNYGNYIVYQDPRYSLNIYSVCC----DVLDSGPIRMGVLPPEEEHP-----------------------MIQIIAQKIGFDFEIVPYVEWGGYSEANN--NWTGITKNMV------YMGPFDVKEF---------------VTIVCPRPRPL-PKINNIIIPFSKNVWIGTFFSYFIVGGILSLVSCI-----YKSWRIHPEIKPAEKPLKWISRFEVSYGIPFGEGVPNKWIGPYSAFSIILTFWQLMAMVLILSYTCNLRSYLIVNPYERPIDSLEEL----KVSNYQFVVGLYEQIYAFADPYLRESMHYFL-ERDRLIIKDSQIFLPDVVKPDQCSVQHSTSSYYMNYKSVKKDGIPQFHVAQ-VPFNSPFVSWYFKKPNLISTKMRENVARVMDSGMAMRFYKDNVPPLYKVKEESKIEAQSLDEVIILFIFLAGISAVSVLLLIFE 521
            +K +Q   LT  I+F+ TS    D  L I       GL K+G W+          P   LNI  V      +V DS   R  ++    E P                       +++ +A  +GF +EI   VE G Y   ++   W G+ K ++       + P  +                  V+I+  +P    P + + + P S ++W+    +Y  V  +L +++       Y +   +P  +  E     ++ F    G    +G  ++ +    +  II   W    +++I SYT NL ++L V   E PIDS ++L    K+       G     +  +     E M  F+  +   ++K+++  +   +  D   +  ST+  Y+  ++     I     ++     +P  S Y  K  +   +++E     +   M  ++++ +  P  + KE S +  Q +  +   FI LA    +SVL+ + E
Sbjct:  366 IKEAQWEGLTGRIVFNKTSGLRTDFDLDI-ISLKEDGLEKVGVWS----------PADGLNITEVAKGRGPNVTDSLTNRSLIVTTVLEEPFVMFRKSDRTLYGNDRFEGYCIDLLKELAHILGFSYEI-RLVEDGKYGAQDDKGQWNGMVKELIDHKADLAVAPLTITHVREKAIDFSKPFMTLGVSILYRKPNGTNPSVFSFLNPLSPDIWMYVLLAYLGVSCVLFVIARFSPYEWYDAHPCNPGSEVVENNFTLLNSFWFGMGSLMQQG--SELMPKALSTRIIGGIWWFFTLIIISSYTANLAAFLTVERMESPIDSADDLAKQTKIEYGAVKDGATMTFFKKSKISTFEKMWAFMSSKPSALVKNNEEGIQRALTADYALLMESTTIEYVTQRNCNLTQIGGLIDSKGYGIGTPMGSPYRDKITIAILQLQEEDKLHI---MKEKWWRGSGCPEEENKEASALGIQKIGGI---FIVLAAGLVLSVLVAVGE 842

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BLAST of EMLSAG00000012262 vs. GO
Match: - (symbol:Grik3 "Glutamate receptor ionotropic, kainate 3" species:10116 "Rattus norvegicus" [GO:0001640 "adenylate cyclase inhibiting G-protein coupled glutamate receptor activity" evidence=IEA] [GO:0005234 "extracellular-glutamate-gated ion channel activity" evidence=IEA] [GO:0005887 "integral component of plasma membrane" evidence=IEA] [GO:0015277 "kainate selective glutamate receptor activity" evidence=IEA] [GO:0030054 "cell junction" evidence=IEA] [GO:0045211 "postsynaptic membrane" evidence=IEA] InterPro:IPR001320 InterPro:IPR001508 InterPro:IPR019594 Pfam:PF00060 Pfam:PF10613 PRINTS:PR00177 SMART:SM00079 SMART:SM00918 Pfam:PF01094 RGD:71027 GO:GO:0005887 GO:GO:0030054 GO:GO:0045211 GO:GO:0034220 GO:GO:0035235 InterPro:IPR028082 SUPFAM:SSF53822 InterPro:IPR001828 GO:GO:0005234 GO:GO:0015277 TreeFam:TF334668 GeneTree:ENSGT00740000114953 OrthoDB:EOG71G9W6 OMA:EEQAFRF GO:GO:0001640 NextBio:643848 EMBL:AABR06039860 EMBL:AABR06039861 EMBL:AABR06039862 EMBL:AABR06039863 EMBL:AABR06039864 Ensembl:ENSRNOT00000045513 Uniprot:G3V9I2)

HSP 1 Score: 52.373 bits (124), Expect = 1.000e-5
Identity = 103/497 (20.72%), Postives = 193/497 (38.83%), Query Frame = 0

Query:   89 LKTSQNRLLTPVILFSPTSN--GDVQLSIWCPHCGTGLNKIGYWNNYGNYIVYQDPRYSLNIYSVCC----DVLDSGPIRMGVLPPEEEHP-----------------------MIQIIAQKIGFDFEIVPYVEWGGYSEANN--NWTGITKNMV------YMGPFDVKEF---------------VTIVCPRPRPL-PKINNIIIPFSKNVWIGTFFSYFIVGGILSLVSCI-----YKSWRIHPEIKPAEKPLKWISRFEVSYGIPFGEGVPNKWIGPYSAFSIILTFWQLMAMVLILSYTCNLRSYLIVNPYERPIDSLEEL----KVSNYQFVVGLYEQIYAFADPYLRESMHYFL-ERDRLIIKDSQIFLPDVVKPDQCSVQHSTSSYYMNYKSVKKDGIPQFHVAQ-VPFNSPFVSWYFKKPNLISTKMRENVARVMDSGMAMRFYKDNVPPLYKVKEESKIEAQSLDEVIILFIFLAGISAVSVLLLIFE 521
            +K +Q   LT  I+F+ TS    D  L I       GL K+G W+          P   LNI  V      +V DS   R  ++    E P                       +++ +A  +GF +EI   VE G Y   ++   W G+ K ++       + P  +                  V+I+  +P    P + + + P S ++W+    +Y  V  +L +++       Y +   +P  +  E     ++ F    G    +G  ++ +    +  II   W    +++I SYT NL ++L V   E PIDS ++L    K+       G     +  +     E M  F+  +   ++K+++  +   +  D   +  ST+  Y+  ++     I     ++     +P  S Y  K  +   +++E     +   M  ++++ +  P  + KE S +  Q +  +   FI LA    +SVL+ + E
Sbjct:  335 IKEAQWEGLTGRIVFNKTSGLRTDFDLDI-ISLKEDGLEKVGVWS----------PADGLNITEVAKGRGPNVTDSLTNRSLIVTTLLEEPFVMFRKSDRTLYGNDRFEGYCIDLLKELAHILGFSYEI-RLVEDGKYGAQDDKGQWNGMVKELIDHKADLAVAPLTITHVREKAIDFSKPFMTLGVSILYRKPNGTNPSVFSFLNPLSPDIWMYVLLAYLGVSCVLFVIARFSPYEWYDAHPCNPGSEVVENNFTLLNSFWFGMGSLMQQG--SELMPKALSTRIIGGIWWFFTLIIISSYTANLAAFLTVERMESPIDSADDLAKQTKIEYGAVKDGATMTFFKKSKISTFEKMWAFMSSKPSALVKNNEEGIQRTLTADYALLMESTTIEYITQRNCNLTQIGGLIDSKGYGIGTPMGSPYRDKITIAILQLQEEDKLHI---MKEKWWRGSGCPEEENKEASALGIQKIGGI---FIVLAAGLVLSVLVAVGE 811

[Close]

BLAST of EMLSAG00000012262 vs. GO
Match: - (symbol:Grik3 "glutamate receptor, ionotropic, kainate 3" species:10090 "Mus musculus" [GO:0001640 "adenylate cyclase inhibiting G-protein coupled glutamate receptor activity" evidence=ISO] [GO:0004872 "receptor activity" evidence=IEA] [GO:0004970 "ionotropic glutamate receptor activity" evidence=ISO] [GO:0005216 "ion channel activity" evidence=IEA] [GO:0005234 "extracellular-glutamate-gated ion channel activity" evidence=IBA] [GO:0005515 "protein binding" evidence=IPI] [GO:0005886 "plasma membrane" evidence=IDA] [GO:0005887 "integral component of plasma membrane" evidence=ISO] [GO:0006810 "transport" evidence=IEA] [GO:0006811 "ion transport" evidence=IEA] [GO:0007165 "signal transduction" evidence=ISO] [GO:0007196 "adenylate cyclase-inhibiting G-protein coupled glutamate receptor signaling pathway" evidence=ISO] [GO:0007215 "glutamate receptor signaling pathway" evidence=ISO] [GO:0007216 "G-protein coupled glutamate receptor signaling pathway" evidence=ISO] [GO:0008066 "glutamate receptor activity" evidence=ISO] [GO:0015277 "kainate selective glutamate receptor activity" evidence=ISO;IBA] [GO:0016020 "membrane" evidence=IEA] [GO:0016021 "integral component of membrane" evidence=IEA] [GO:0030054 "cell junction" evidence=IEA] [GO:0030424 "axon" evidence=ISO] [GO:0030425 "dendrite" evidence=ISO;IBA] [GO:0032839 "dendrite cytoplasm" evidence=ISO] [GO:0032983 "kainate selective glutamate receptor complex" evidence=IBA] [GO:0034220 "ion transmembrane transport" evidence=ISO;IBA] [GO:0035235 "ionotropic glutamate receptor signaling pathway" evidence=ISO;IBA] [GO:0035249 "synaptic transmission, glutamatergic" evidence=IBA] [GO:0042391 "regulation of membrane potential" evidence=ISO] [GO:0042734 "presynaptic membrane" evidence=IBA] [GO:0043195 "terminal bouton" evidence=ISO] [GO:0043204 "perikaryon" evidence=ISO] [GO:0045202 "synapse" evidence=IEA] [GO:0045211 "postsynaptic membrane" evidence=IBA] [GO:0051967 "negative regulation of synaptic transmission, glutamatergic" evidence=ISO] InterPro:IPR001320 InterPro:IPR001508 InterPro:IPR019594 Pfam:PF00060 Pfam:PF10613 PRINTS:PR00177 SMART:SM00079 SMART:SM00918 Pfam:PF01094 MGI:MGI:95816 GO:GO:0005886 GO:GO:0005887 GO:GO:0030054 GO:GO:0045211 InterPro:IPR028082 SUPFAM:SSF53822 InterPro:IPR001828 GO:GO:0005234 GO:GO:0004970 eggNOG:NOG316680 HOGENOM:HOG000234371 HOVERGEN:HBG051839 GO:GO:0015277 TreeFam:TF334668 GeneTree:ENSGT00740000114953 OrthoDB:EOG71G9W6 CTD:2899 KO:K05203 OMA:EEQAFRF GO:GO:0001640 EMBL:AL607090 EMBL:AL627328 EMBL:BC118004 EMBL:AF245444 RefSeq:NP_001074566.1 UniGene:Mm.40896 ProteinModelPortal:B1AS29 SMR:B1AS29 STRING:10090.ENSMUSP00000030676 PaxDb:B1AS29 PRIDE:B1AS29 DNASU:14807 Ensembl:ENSMUST00000030676 GeneID:14807 KEGG:mmu:14807 UCSC:uc008usa.2 InParanoid:B1AS29 ChiTaRS:GRIK3 NextBio:286987 PRO:PR:B1AS29 Bgee:B1AS29 Genevestigator:B1AS29 Uniprot:B1AS29)

HSP 1 Score: 52.373 bits (124), Expect = 1.004e-5
Identity = 103/497 (20.72%), Postives = 193/497 (38.83%), Query Frame = 0

Query:   89 LKTSQNRLLTPVILFSPTSN--GDVQLSIWCPHCGTGLNKIGYWNNYGNYIVYQDPRYSLNIYSVCC----DVLDSGPIRMGVLPPEEEHP-----------------------MIQIIAQKIGFDFEIVPYVEWGGYSEANN--NWTGITKNMV------YMGPFDVKEF---------------VTIVCPRPRPL-PKINNIIIPFSKNVWIGTFFSYFIVGGILSLVSCI-----YKSWRIHPEIKPAEKPLKWISRFEVSYGIPFGEGVPNKWIGPYSAFSIILTFWQLMAMVLILSYTCNLRSYLIVNPYERPIDSLEEL----KVSNYQFVVGLYEQIYAFADPYLRESMHYFL-ERDRLIIKDSQIFLPDVVKPDQCSVQHSTSSYYMNYKSVKKDGIPQFHVAQ-VPFNSPFVSWYFKKPNLISTKMRENVARVMDSGMAMRFYKDNVPPLYKVKEESKIEAQSLDEVIILFIFLAGISAVSVLLLIFE 521
            +K +Q   LT  I+F+ TS    D  L I       GL K+G W+          P   LNI  V      +V DS   R  ++    E P                       +++ +A  +GF +EI   VE G Y   ++   W G+ K ++       + P  +                  V+I+  +P    P + + + P S ++W+    +Y  V  +L +++       Y +   +P  +  E     ++ F    G    +G  ++ +    +  II   W    +++I SYT NL ++L V   E PIDS ++L    K+       G     +  +     E M  F+  +   ++K+++  +   +  D   +  ST+  Y+  ++     I     ++     +P  S Y  K  +   +++E     +   M  ++++ +  P  + KE S +  Q +  +   FI LA    +SVL+ + E
Sbjct:  366 IKEAQWEGLTGRIVFNKTSGLRTDFDLDIISLK-EDGLEKVGVWS----------PADGLNITEVAKGRGPNVTDSLTNRSLIVTTVLEEPFVMFRKSDRTLYGNDRFEGYCIDLLKELAHILGFSYEI-RLVEDGKYGAQDDKGQWNGMVKELIDHKADLAVAPLTITHVREKAIDFSKPFMTLGVSILYRKPNGTNPSVFSFLNPLSPDIWMYVLLAYLGVSCVLFVIARFSPYEWYDAHPCNPGSEVVENNFTLLNSFWFGMGSLMQQG--SELMPKALSTRIIGGIWWFFTLIIISSYTANLAAFLTVERMESPIDSADDLAKQTKIEYGAVKDGATMTFFKKSKISTFEKMWAFMSSKPSALVKNNEEGIQRTLTADYALLMESTTIEYITQRNCNLTQIGGLIDSKGYGIGTPMGSPYRDKITIAILQLQEEDKLHI---MKEKWWRGSGCPEEENKEASALGIQKIGGI---FIVLAAGLVLSVLVAVGE 842

[Close]

BLAST of EMLSAG00000012262 vs. GO
Match: - (symbol:Grik3 "Glutamate receptor ionotropic, kainate 3" species:10116 "Rattus norvegicus" [GO:0004970 "ionotropic glutamate receptor activity" evidence=IMP;IDA] [GO:0007165 "signal transduction" evidence=IDA] [GO:0030054 "cell junction" evidence=IEA] [GO:0030425 "dendrite" evidence=IDA] [GO:0035235 "ionotropic glutamate receptor signaling pathway" evidence=IMP;IDA] [GO:0042391 "regulation of membrane potential" evidence=IDA] [GO:0051967 "negative regulation of synaptic transmission, glutamatergic" evidence=IDA] InterPro:IPR001320 InterPro:IPR001508 InterPro:IPR019594 Pfam:PF00060 Pfam:PF10613 PRINTS:PR00177 SMART:SM00079 SMART:SM00918 EMBL:AF027331 Pfam:PF01094 RGD:71027 GO:GO:0016021 GO:GO:0007268 GO:GO:0051967 GO:GO:0030054 GO:GO:0045211 GO:GO:0043204 GO:GO:0043195 GO:GO:0042391 GO:GO:0032839 InterPro:IPR028082 SUPFAM:SSF53822 InterPro:IPR001828 GO:GO:0005234 GO:GO:0004970 eggNOG:NOG316680 HOGENOM:HOG000234371 HOVERGEN:HBG051839 CTD:2899 KO:K05203 EMBL:Z11716 EMBL:M83552 PIR:I53474 PIR:S19810 RefSeq:NP_001106187.1 RefSeq:NP_852038.2 UniGene:Rn.92477 PDB:3OLZ PDB:3S9E PDB:3U92 PDB:3U93 PDB:3U94 PDB:4E0W PDB:4G8N PDB:4IGR PDB:4MH5 PDBsum:3OLZ PDBsum:3S9E PDBsum:3U92 PDBsum:3U93 PDBsum:3U94 PDBsum:4E0W PDBsum:4G8N PDBsum:4IGR PDBsum:4MH5 ProteinModelPortal:P42264 SMR:P42264 BindingDB:P42264 ChEMBL:CHEMBL3744 PaxDb:P42264 PRIDE:P42264 GeneID:298521 KEGG:rno:298521 UCSC:RGD:71027 InParanoid:P42264 NextBio:643848 PRO:PR:P42264 Genevestigator:P42264 Uniprot:P42264)

HSP 1 Score: 52.373 bits (124), Expect = 1.048e-5
Identity = 103/497 (20.72%), Postives = 193/497 (38.83%), Query Frame = 0

Query:   89 LKTSQNRLLTPVILFSPTSN--GDVQLSIWCPHCGTGLNKIGYWNNYGNYIVYQDPRYSLNIYSVCC----DVLDSGPIRMGVLPPEEEHP-----------------------MIQIIAQKIGFDFEIVPYVEWGGYSEANN--NWTGITKNMV------YMGPFDVKEF---------------VTIVCPRPRPL-PKINNIIIPFSKNVWIGTFFSYFIVGGILSLVSCI-----YKSWRIHPEIKPAEKPLKWISRFEVSYGIPFGEGVPNKWIGPYSAFSIILTFWQLMAMVLILSYTCNLRSYLIVNPYERPIDSLEEL----KVSNYQFVVGLYEQIYAFADPYLRESMHYFL-ERDRLIIKDSQIFLPDVVKPDQCSVQHSTSSYYMNYKSVKKDGIPQFHVAQ-VPFNSPFVSWYFKKPNLISTKMRENVARVMDSGMAMRFYKDNVPPLYKVKEESKIEAQSLDEVIILFIFLAGISAVSVLLLIFE 521
            +K +Q   LT  I+F+ TS    D  L I       GL K+G W+          P   LNI  V      +V DS   R  ++    E P                       +++ +A  +GF +EI   VE G Y   ++   W G+ K ++       + P  +                  V+I+  +P    P + + + P S ++W+    +Y  V  +L +++       Y +   +P  +  E     ++ F    G    +G  ++ +    +  II   W    +++I SYT NL ++L V   E PIDS ++L    K+       G     +  +     E M  F+  +   ++K+++  +   +  D   +  ST+  Y+  ++     I     ++     +P  S Y  K  +   +++E     +   M  ++++ +  P  + KE S +  Q +  +   FI LA    +SVL+ + E
Sbjct:  366 IKEAQWEGLTGRIVFNKTSGLRTDFDLDIISLK-EDGLEKVGVWS----------PADGLNITEVAKGRGPNVTDSLTNRSLIVTTLLEEPFVMFRKSDRTLYGNDRFEGYCIDLLKELAHILGFSYEI-RLVEDGKYGAQDDKGQWNGMVKELIDHKADLAVAPLTITHVREKAIDFSKPFMTLGVSILYRKPNGTNPSVFSFLNPLSPDIWMYVLLAYLGVSCVLFVIARFSPYEWYDAHPCNPGSEVVENNFTLLNSFWFGMGSLMQQG--SELMPKALSTRIIGGIWWFFTLIIISSYTANLAAFLTVERMESPIDSADDLAKQTKIEYGAVKDGATMTFFKKSKISTFEKMWAFMSSKPSALVKNNEEGIQRTLTADYALLMESTTIEYITQRNCNLTQIGGLIDSKGYGIGTPMGSPYRDKITIAILQLQEEDKLHI---MKEKWWRGSGCPEEENKEASALGIQKIGGI---FIVLAAGLVLSVLVAVGE 842

[Close]

BLAST of EMLSAG00000012262 vs. GO
Match: - (symbol:Grik3 "glutamate receptor, ionotropic, kainate 3" species:10116 "Rattus norvegicus" [GO:0001640 "adenylate cyclase inhibiting G-protein coupled glutamate receptor activity" evidence=IEA;ISO] [GO:0004970 "ionotropic glutamate receptor activity" evidence=ISO;IMP;IDA] [GO:0005234 "extracellular-glutamate-gated ion channel activity" evidence=IEA;IBA] [GO:0005886 "plasma membrane" evidence=ISO] [GO:0005887 "integral component of plasma membrane" evidence=IEA;ISO] [GO:0007165 "signal transduction" evidence=IDA] [GO:0007196 "adenylate cyclase-inhibiting G-protein coupled glutamate receptor signaling pathway" evidence=ISO] [GO:0007215 "glutamate receptor signaling pathway" evidence=ISO] [GO:0007216 "G-protein coupled glutamate receptor signaling pathway" evidence=ISO] [GO:0007268 "synaptic transmission" evidence=NAS] [GO:0008066 "glutamate receptor activity" evidence=IDA] [GO:0015277 "kainate selective glutamate receptor activity" evidence=IEA;ISO;IBA] [GO:0030054 "cell junction" evidence=IEA] [GO:0030424 "axon" evidence=IDA] [GO:0030425 "dendrite" evidence=IDA] [GO:0032839 "dendrite cytoplasm" evidence=IDA] [GO:0032983 "kainate selective glutamate receptor complex" evidence=IBA] [GO:0034220 "ion transmembrane transport" evidence=IBA] [GO:0035235 "ionotropic glutamate receptor signaling pathway" evidence=ISO;IBA;IMP;IDA] [GO:0042391 "regulation of membrane potential" evidence=ISO;IDA] [GO:0042734 "presynaptic membrane" evidence=IBA] [GO:0043195 "terminal bouton" evidence=IDA] [GO:0043204 "perikaryon" evidence=IDA] [GO:0045211 "postsynaptic membrane" evidence=IEA;IBA] [GO:0051967 "negative regulation of synaptic transmission, glutamatergic" evidence=IDA] InterPro:IPR001320 InterPro:IPR001508 InterPro:IPR019594 Pfam:PF00060 Pfam:PF10613 PRINTS:PR00177 SMART:SM00079 SMART:SM00918 EMBL:AF027331 Pfam:PF01094 RGD:71027 GO:GO:0016021 GO:GO:0007268 GO:GO:0051967 GO:GO:0030054 GO:GO:0045211 GO:GO:0043204 GO:GO:0043195 GO:GO:0042391 GO:GO:0032839 InterPro:IPR028082 SUPFAM:SSF53822 InterPro:IPR001828 GO:GO:0005234 GO:GO:0004970 eggNOG:NOG316680 HOGENOM:HOG000234371 HOVERGEN:HBG051839 CTD:2899 KO:K05203 EMBL:Z11716 EMBL:M83552 PIR:I53474 PIR:S19810 RefSeq:NP_001106187.1 RefSeq:NP_852038.2 UniGene:Rn.92477 PDB:3OLZ PDB:3S9E PDB:3U92 PDB:3U93 PDB:3U94 PDB:4E0W PDB:4G8N PDB:4IGR PDB:4MH5 PDBsum:3OLZ PDBsum:3S9E PDBsum:3U92 PDBsum:3U93 PDBsum:3U94 PDBsum:4E0W PDBsum:4G8N PDBsum:4IGR PDBsum:4MH5 ProteinModelPortal:P42264 SMR:P42264 BindingDB:P42264 ChEMBL:CHEMBL3744 PaxDb:P42264 PRIDE:P42264 GeneID:298521 KEGG:rno:298521 UCSC:RGD:71027 InParanoid:P42264 NextBio:643848 PRO:PR:P42264 Genevestigator:P42264 Uniprot:P42264)

HSP 1 Score: 52.373 bits (124), Expect = 1.048e-5
Identity = 103/497 (20.72%), Postives = 193/497 (38.83%), Query Frame = 0

Query:   89 LKTSQNRLLTPVILFSPTSN--GDVQLSIWCPHCGTGLNKIGYWNNYGNYIVYQDPRYSLNIYSVCC----DVLDSGPIRMGVLPPEEEHP-----------------------MIQIIAQKIGFDFEIVPYVEWGGYSEANN--NWTGITKNMV------YMGPFDVKEF---------------VTIVCPRPRPL-PKINNIIIPFSKNVWIGTFFSYFIVGGILSLVSCI-----YKSWRIHPEIKPAEKPLKWISRFEVSYGIPFGEGVPNKWIGPYSAFSIILTFWQLMAMVLILSYTCNLRSYLIVNPYERPIDSLEEL----KVSNYQFVVGLYEQIYAFADPYLRESMHYFL-ERDRLIIKDSQIFLPDVVKPDQCSVQHSTSSYYMNYKSVKKDGIPQFHVAQ-VPFNSPFVSWYFKKPNLISTKMRENVARVMDSGMAMRFYKDNVPPLYKVKEESKIEAQSLDEVIILFIFLAGISAVSVLLLIFE 521
            +K +Q   LT  I+F+ TS    D  L I       GL K+G W+          P   LNI  V      +V DS   R  ++    E P                       +++ +A  +GF +EI   VE G Y   ++   W G+ K ++       + P  +                  V+I+  +P    P + + + P S ++W+    +Y  V  +L +++       Y +   +P  +  E     ++ F    G    +G  ++ +    +  II   W    +++I SYT NL ++L V   E PIDS ++L    K+       G     +  +     E M  F+  +   ++K+++  +   +  D   +  ST+  Y+  ++     I     ++     +P  S Y  K  +   +++E     +   M  ++++ +  P  + KE S +  Q +  +   FI LA    +SVL+ + E
Sbjct:  366 IKEAQWEGLTGRIVFNKTSGLRTDFDLDIISLK-EDGLEKVGVWS----------PADGLNITEVAKGRGPNVTDSLTNRSLIVTTLLEEPFVMFRKSDRTLYGNDRFEGYCIDLLKELAHILGFSYEI-RLVEDGKYGAQDDKGQWNGMVKELIDHKADLAVAPLTITHVREKAIDFSKPFMTLGVSILYRKPNGTNPSVFSFLNPLSPDIWMYVLLAYLGVSCVLFVIARFSPYEWYDAHPCNPGSEVVENNFTLLNSFWFGMGSLMQQG--SELMPKALSTRIIGGIWWFFTLIIISSYTANLAAFLTVERMESPIDSADDLAKQTKIEYGAVKDGATMTFFKKSKISTFEKMWAFMSSKPSALVKNNEEGIQRTLTADYALLMESTTIEYITQRNCNLTQIGGLIDSKGYGIGTPMGSPYRDKITIAILQLQEEDKLHI---MKEKWWRGSGCPEEENKEASALGIQKIGGI---FIVLAAGLVLSVLVAVGE 842

[Close]

BLAST of EMLSAG00000012262 vs. GO
Match: - (symbol:GRIK3 "Uncharacterized protein" species:9615 "Canis lupus familiaris" [GO:0001640 "adenylate cyclase inhibiting G-protein coupled glutamate receptor activity" evidence=IEA] [GO:0005234 "extracellular-glutamate-gated ion channel activity" evidence=IBA] [GO:0015277 "kainate selective glutamate receptor activity" evidence=IBA] [GO:0030054 "cell junction" evidence=IEA] [GO:0030425 "dendrite" evidence=IBA] [GO:0032983 "kainate selective glutamate receptor complex" evidence=IBA] [GO:0034220 "ion transmembrane transport" evidence=IBA] [GO:0035235 "ionotropic glutamate receptor signaling pathway" evidence=IBA] [GO:0035249 "synaptic transmission, glutamatergic" evidence=IBA] [GO:0042734 "presynaptic membrane" evidence=IBA] [GO:0045211 "postsynaptic membrane" evidence=IBA] InterPro:IPR001320 InterPro:IPR001508 InterPro:IPR019594 Pfam:PF00060 Pfam:PF10613 PRINTS:PR00177 SMART:SM00079 SMART:SM00918 Pfam:PF01094 GO:GO:0005887 GO:GO:0030054 GO:GO:0045211 GO:GO:0034220 GO:GO:0035235 InterPro:IPR028082 SUPFAM:SSF53822 InterPro:IPR001828 GO:GO:0005234 GO:GO:0015277 TreeFam:TF334668 GeneTree:ENSGT00740000114953 KO:K05203 GO:GO:0001640 EMBL:AAEX03009618 EMBL:AAEX03009619 EMBL:AAEX03009620 EMBL:AAEX03009621 EMBL:AAEX03009622 EMBL:AAEX03009623 EMBL:AAEX03009624 EMBL:AAEX03009625 RefSeq:XP_850331.3 Ensembl:ENSCAFT00000005371 GeneID:608269 KEGG:cfa:608269 Uniprot:F1PWT6)

HSP 1 Score: 52.373 bits (124), Expect = 1.066e-5
Identity = 103/497 (20.72%), Postives = 193/497 (38.83%), Query Frame = 0

Query:   89 LKTSQNRLLTPVILFSPTSN--GDVQLSIWCPHCGTGLNKIGYWNNYGNYIVYQDPRYSLNIYSVCC----DVLDSGPIRMGVLPPEEEHP-----------------------MIQIIAQKIGFDFEIVPYVEWGGYSEANN--NWTGITKNMV------YMGPFDVKEF---------------VTIVCPRPRPL-PKINNIIIPFSKNVWIGTFFSYFIVGGILSLVSCI-----YKSWRIHPEIKPAEKPLKWISRFEVSYGIPFGEGVPNKWIGPYSAFSIILTFWQLMAMVLILSYTCNLRSYLIVNPYERPIDSLEEL----KVSNYQFVVGLYEQIYAFADPYLRESMHYFL-ERDRLIIKDSQIFLPDVVKPDQCSVQHSTSSYYMNYKSVKKDGIPQFHVAQ-VPFNSPFVSWYFKKPNLISTKMRENVARVMDSGMAMRFYKDNVPPLYKVKEESKIEAQSLDEVIILFIFLAGISAVSVLLLIFE 521
            +K +Q   LT  I+F+ TS    D  L I       GL K+G W+          P   LNI  V      +V DS   R  ++    E P                       +++ +A  +GF +EI   VE G Y   ++   W G+ K ++       + P  +                  V+I+  +P    P + + + P S ++W+    +Y  V  +L +++       Y +   +P  +  E     ++ F    G    +G  ++ +    +  II   W    +++I SYT NL ++L V   E PIDS ++L    K+       G     +  +     E M  F+  +   ++K+++  +   +  D   +  ST+  Y+  ++     I     ++     +P  S Y  K  +   +++E     +   M  ++++ +  P  + KE S +  Q +  +   FI LA    +SVL+ + E
Sbjct:  366 IKEAQWEGLTGRIVFNKTSGLRTDFDLDIISLK-EDGLEKVGVWS----------PAEGLNITEVAKGRGPNVTDSLTNRSLIVTTVLEEPFVMFRKSDRTLFGNDRFEGYCIDLLKELAHILGFSYEI-RLVEDGKYGAQDDKGQWNGMIKELIDHKADLAVAPLTITHVREKAIDFSKPFMTLGVSILYRKPNGTNPSVFSFLNPLSPDIWMYVLLAYLGVSCVLFVIARFSPYEWYDAHPCNPGSEVVENNFTLLNSFWFGMGSLMQQG--SELMPKALSTRIIGGIWWFFTLIIISSYTANLAAFLTVERMESPIDSADDLAKQTKIEYGAVKDGATMTFFKKSKISTFEKMWAFMSSKPSALVKNNEEGIQRTLTADYALLMESTTIEYVTQRNCNLTQIGGLIDSKGYGIGTPMGSPYRDKITIAILQLQEEDKLHI---MKEKWWRGSGCPEEENKEASALGIQKIGGI---FIVLAAGLVLSVLVAVGE 842

[Close]

BLAST of EMLSAG00000012262 vs. GO
Match: - (symbol:GRIK3 "Glutamate receptor ionotropic, kainate 3" species:9606 "Homo sapiens" [GO:0001640 "adenylate cyclase inhibiting G-protein coupled glutamate receptor activity" evidence=IDA] [GO:0004970 "ionotropic glutamate receptor activity" evidence=ISS;IDA] [GO:0005234 "extracellular-glutamate-gated ion channel activity" evidence=IBA] [GO:0005886 "plasma membrane" evidence=TAS] [GO:0005887 "integral component of plasma membrane" evidence=IDA] [GO:0007196 "adenylate cyclase-inhibiting G-protein coupled glutamate receptor signaling pathway" evidence=IDA] [GO:0007215 "glutamate receptor signaling pathway" evidence=IDA] [GO:0007216 "G-protein coupled glutamate receptor signaling pathway" evidence=IDA] [GO:0007268 "synaptic transmission" evidence=TAS] [GO:0008066 "glutamate receptor activity" evidence=TAS] [GO:0015277 "kainate selective glutamate receptor activity" evidence=IDA] [GO:0030054 "cell junction" evidence=IEA] [GO:0030424 "axon" evidence=ISS] [GO:0030425 "dendrite" evidence=ISS;IBA] [GO:0032839 "dendrite cytoplasm" evidence=ISS] [GO:0032983 "kainate selective glutamate receptor complex" evidence=IBA] [GO:0034220 "ion transmembrane transport" evidence=IBA] [GO:0035235 "ionotropic glutamate receptor signaling pathway" evidence=ISS;IDA] [GO:0035249 "synaptic transmission, glutamatergic" evidence=IBA] [GO:0042391 "regulation of membrane potential" evidence=ISS;IDA] [GO:0042734 "presynaptic membrane" evidence=IBA] [GO:0043195 "terminal bouton" evidence=ISS] [GO:0043204 "perikaryon" evidence=ISS] [GO:0045211 "postsynaptic membrane" evidence=IBA] [GO:0051967 "negative regulation of synaptic transmission, glutamatergic" evidence=ISS] Reactome:REACT_13685 InterPro:IPR001320 InterPro:IPR001508 InterPro:IPR019594 Pfam:PF00060 Pfam:PF10613 PRINTS:PR00177 SMART:SM00079 SMART:SM00918 Pfam:PF01094 GO:GO:0005887 EMBL:CH471059 GO:GO:0007268 GO:GO:0051967 GO:GO:0030054 GO:GO:0045211 GO:GO:0043204 GO:GO:0043195 DrugBank:DB00142 GO:GO:0042391 GO:GO:0032839 InterPro:IPR028082 SUPFAM:SSF53822 InterPro:IPR001828 GO:GO:0005234 eggNOG:NOG316680 HOGENOM:HOG000234371 HOVERGEN:HBG051839 GO:GO:0015277 TreeFam:TF334668 OrthoDB:EOG71G9W6 EMBL:U16127 EMBL:U16128 EMBL:AL355386 EMBL:AC117945 EMBL:S69349 PIR:I59604 RefSeq:NP_000822.2 UniGene:Hs.128848 ProteinModelPortal:Q13003 SMR:Q13003 BioGrid:109156 STRING:9606.ENSP00000362183 BindingDB:Q13003 ChEMBL:CHEMBL3684 GuidetoPHARMACOLOGY:452 PhosphoSite:Q13003 DMDM:212276502 PaxDb:Q13003 PRIDE:Q13003 DNASU:2899 Ensembl:ENST00000373091 GeneID:2899 KEGG:hsa:2899 UCSC:uc001caz.2 CTD:2899 GeneCards:GC01M037261 H-InvDB:HIX0028621 HGNC:HGNC:4581 HPA:HPA014709 MIM:138243 neXtProt:NX_Q13003 PharmGKB:PA28975 InParanoid:Q13003 KO:K05203 OMA:EEQAFRF PhylomeDB:Q13003 SignaLink:Q13003 GeneWiki:GRIK3 GenomeRNAi:2899 NextBio:11475 PRO:PR:Q13003 ArrayExpress:Q13003 Bgee:Q13003 CleanEx:HS_GRIK3 Genevestigator:Q13003 GO:GO:0001640 Uniprot:Q13003)

HSP 1 Score: 52.373 bits (124), Expect = 1.085e-5
Identity = 103/497 (20.72%), Postives = 193/497 (38.83%), Query Frame = 0

Query:   89 LKTSQNRLLTPVILFSPTSN--GDVQLSIWCPHCGTGLNKIGYWNNYGNYIVYQDPRYSLNIYSVCC----DVLDSGPIRMGVLPPEEEHP-----------------------MIQIIAQKIGFDFEIVPYVEWGGYSEANN--NWTGITKNMV------YMGPFDVKEF---------------VTIVCPRPRPL-PKINNIIIPFSKNVWIGTFFSYFIVGGILSLVSCI-----YKSWRIHPEIKPAEKPLKWISRFEVSYGIPFGEGVPNKWIGPYSAFSIILTFWQLMAMVLILSYTCNLRSYLIVNPYERPIDSLEEL----KVSNYQFVVGLYEQIYAFADPYLRESMHYFL-ERDRLIIKDSQIFLPDVVKPDQCSVQHSTSSYYMNYKSVKKDGIPQFHVAQ-VPFNSPFVSWYFKKPNLISTKMRENVARVMDSGMAMRFYKDNVPPLYKVKEESKIEAQSLDEVIILFIFLAGISAVSVLLLIFE 521
            +K +Q   LT  I+F+ TS    D  L I       GL K+G W+          P   LNI  V      +V DS   R  ++    E P                       +++ +A  +GF +EI   VE G Y   ++   W G+ K ++       + P  +                  V+I+  +P    P + + + P S ++W+    +Y  V  +L +++       Y +   +P  +  E     ++ F    G    +G  ++ +    +  II   W    +++I SYT NL ++L V   E PIDS ++L    K+       G     +  +     E M  F+  +   ++K+++  +   +  D   +  ST+  Y+  ++     I     ++     +P  S Y  K  +   +++E     +   M  ++++ +  P  + KE S +  Q +  +   FI LA    +SVL+ + E
Sbjct:  366 IKEAQWEGLTGRIVFNKTSGLRTDFDLDIISLK-EDGLEKVGVWS----------PADGLNITEVAKGRGPNVTDSLTNRSLIVTTVLEEPFVMFRKSDRTLYGNDRFEGYCIDLLKELAHILGFSYEI-RLVEDGKYGAQDDKGQWNGMVKELIDHKADLAVAPLTITHVREKAIDFSKPFMTLGVSILYRKPNGTNPSVFSFLNPLSPDIWMYVLLAYLGVSCVLFVIARFSPYEWYDAHPCNPGSEVVENNFTLLNSFWFGMGSLMQQG--SELMPKALSTRIIGGIWWFFTLIIISSYTANLAAFLTVERMESPIDSADDLAKQTKIEYGAVKDGATMTFFKKSKISTFEKMWAFMSSKPSALVKNNEEGIQRALTADYALLMESTTIEYVTQRNCNLTQIGGLIDSKGYGIGTPMGSPYRDKITIAILQLQEEDKLHI---MKEKWWRGSGCPEEENKEASALGIQKIGGI---FIVLAAGLVLSVLVAVGE 842

[Close]

BLAST of EMLSAG00000012262 vs. C. finmarchicus
Match: gi|592947443|gb|GAXK01011110.1| (TSA: Calanus finmarchicus comp3776687_c0_seq1 transcribed RNA sequence)

HSP 1 Score: 61.2326 bits (147), Expect = 4.550e-9
Identity = 56/213 (26.29%), Postives = 94/213 (44.13%), Query Frame = 0

Query:  176 QIIAQKIGFDFEIVPYVE----WGGYSEANNNWTGITKNMVY------MGPFDVKE---------------FVTIVCPRPRPLPKINNIIIPFSKNVW---IGTFFSYFIVGGILSLVSCIYKSWRIHPEIKPAEKPLKWISRFEVSYGIPF-GEGVPNKWIGPYSAFSIILTFWQLMAMVLILSYTCNLRSYLIVNPYERPIDSLEELKVSN 359
            ++I +K+G   + V Y      WG + +    W+G    ++Y      +   D+KE                V +V  +P P+  INNII PF+  +W   IGTF  + I+  I   V  +   W+   E  P       +  F +S  +PF G   PN W   +++   ++    L  M +I  YT NL + L+   + +PIDS+ ++  S+
Sbjct:  649 KLIGRKLG---QTVSYTHCWWSWGQFDKEKGKWSGAVGKVLYGDADLAVNSLDIKEDRQSVVDFTPSPYGNEVILVSQKPEPISTINNIIRPFNNLIWGLTIGTFLIFAILFVIFFFV--LSNVWKEMNEKHPD------VLDFALSPFVPFIGGDFPN-WFPRWTSGEFLVFVLSLFGMFVIFFYTSNLLADLVQKEFTKPIDSMSDIISSD 1251

[Close]

BLAST of EMLSAG00000012262 vs. C. finmarchicus
Match: gi|592920893|gb|GAXK01037482.1| (TSA: Calanus finmarchicus comp682975_c0_seq7 transcribed RNA sequence)

HSP 1 Score: 45.8246 bits (107), Expect = 2.663e-4
Identity = 61/279 (21.86%), Postives = 116/279 (41.58%), Query Frame = 0

Query:  123 GLNKIGYWNNY------GNYI-VYQDPRYSLNIYSVCCDVLDSGPIRMGVLPPEE-------EHPMIQIIAQ-----KIGFDFEIVPYVEWGGYSEANNNWTGITKNMV----------------------YMGPFDVKEFVTIVCPRPRPL-PKINNIIIPFSKNVWIGTFFSYFIVGGILSLVSCIYKSWRIHPEIKPAEKPLKWISRFEVSYGIPFGEGV---PNKWIGPYS-AFSIILTFWQLMAMVLILSYTCNLRSYLIVNPYERPIDSLEEL 355
            GL K+G W+++       N+   Y +   SL   ++    + S P  M     E+       E   I +IA+     K  + F+ V    +G +++    W G+   ++                      +  PF +   ++++  +P+   P++ + + P S +VWI   F+YFIV  +L +++        +P   P  +    ++ F +   + F  G        + P S +  +I   W    +++I SYT NL ++L V   E PI+S E+L
Sbjct:  162 GLEKVGSWHDHFGIKFSRNFTESYSEIVESLQNKTLVVTTIMSPPYSMFKESSEKLVGNDAFEGFAIDLIAEIAQILKFNYTFKWVDDGAYGYHNKDTGEWNGLMGELLSQKADLAIADLSITYEREKAVDFSNPF-MTLGISVLYRKPKKQDPELFSFMSPLSLDVWIYMVFAYFIVSILLFILARFSPYEWDNPH--PCNEQEVLVNEFSLCNSLWFAVGSLMQQGSDLEPKSVSTRMIAAMWWFFTLIMISSYTANLAAFLTVERMESPIESAEDL 989

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BLAST of EMLSAG00000012262 vs. C. finmarchicus
Match: gi|592920896|gb|GAXK01037479.1| (TSA: Calanus finmarchicus comp682975_c0_seq4 transcribed RNA sequence)

HSP 1 Score: 46.2098 bits (108), Expect = 2.743e-4
Identity = 37/138 (26.81%), Postives = 68/138 (49.28%), Query Frame = 0

Query:  223 VTIVCPRPRPL-PKINNIIIPFSKNVWIGTFFSYFIVGGILSLVSCIYKSWRIHPEIKPAEKPLKWISRFEVSYGIPFGEGV---PNKWIGPYS-AFSIILTFWQLMAMVLILSYTCNLRSYLIVNPYERPIDSLEEL 355
            ++I+  +P+   P++ + + P S +VWI   F+YFIV  +L +++        +P   P  +    ++ F +   + F  G        + P S +  +I   W    +++I SYT NL ++L V   E PI+S E+L
Sbjct: 1097 ISILYRKPKKEDPELFSFMSPLSLDVWIYMVFAYFIVSILLFILARFSPYEWDNPH--PCNEQEVLVNEFSLCNSLWFAVGSLMQQGSDLEPKSVSTRMIAAMWWFFTLIMISSYTANLAAFLTVERMESPIESAEDL 1504

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BLAST of EMLSAG00000012262 vs. C. finmarchicus
Match: gi|592920897|gb|GAXK01037478.1| (TSA: Calanus finmarchicus comp682975_c0_seq3 transcribed RNA sequence)

HSP 1 Score: 45.8246 bits (107), Expect = 3.899e-4
Identity = 37/138 (26.81%), Postives = 68/138 (49.28%), Query Frame = 0

Query:  223 VTIVCPRPRPL-PKINNIIIPFSKNVWIGTFFSYFIVGGILSLVSCIYKSWRIHPEIKPAEKPLKWISRFEVSYGIPFGEGV---PNKWIGPYS-AFSIILTFWQLMAMVLILSYTCNLRSYLIVNPYERPIDSLEEL 355
            ++I+  +P+   P++ + + P S +VWI   F+YFIV  +L +++        +P   P  +    ++ F +   + F  G        + P S +  +I   W    +++I SYT NL ++L V   E PI+S E+L
Sbjct: 1097 ISILYRKPKKEDPELFSFMSPLSLDVWIYMVFAYFIVSILLFILARFSPYEWDNPH--PCNEQEVLVNEFSLCNSLWFAVGSLMQQGSDLEPKSVSTRMIAAMWWFFTLIMISSYTANLAAFLTVERMESPIESAEDL 1504

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BLAST of EMLSAG00000012262 vs. C. finmarchicus
Match: gi|592767825|gb|GAXK01186743.1| (TSA: Calanus finmarchicus comp3401914_c0_seq1 transcribed RNA sequence)

HSP 1 Score: 43.5134 bits (101), Expect = 1.836e-3
Identity = 54/223 (24.22%), Postives = 97/223 (43.50%), Query Frame = 0

Query:  174 MIQIIAQKIGFDFEIVPYV--EWGGYSEANN-------------NW--TGITKN----MVYMGP--FDVKEFVTIVCPRPRPLPKINNIIIPFSKNVWIGTFFSYFIVGGILSLVSCIYKSWRIHPEIKPAEKP--LKWISRFEVSYGIPFGEGVPNKWIGPYSA-FSIILTFWQLMAMVLILSYTCNLRSYLIVNPYERP-IDSLEELKVSNYQFVVGLYEQ 369
            M+++I +K GF +   P    EWG   E+ N             +W  +G+ +     +V   P  FD  +++  V P P  + K  + I PF++ +W+    +  +  G L +++ I +      ++   E    + + +    S+    GE V        S    +I+  W L A+V   SY   +RS+ I NP   P +D+L E+  SN  + + LY +
Sbjct:  681 MVEVIGEKYGFSWVYDPPADGEWGAVQESGNMSGLIGQAAYGSVDWVMSGVMETRDRWLVADNPVSFD-SDYMVFVSPAPAEISKATSPIKPFTQTMWLLVIVTVLVFAGSLVVMATITQ------KMGKGEDDGWMHFSNCVWFSFSTFIGESVMRYEAAIDSGVIKMIVGSWYLYALVATASYAGEIRSFFI-NPGVAPALDNLREVVDSNLPWGLILYGE 1325

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BLAST of EMLSAG00000012262 vs. C. finmarchicus
Match: gi|592949771|gb|GAXK01008782.1| (TSA: Calanus finmarchicus comp3549707_c0_seq1 transcribed RNA sequence)

HSP 1 Score: 42.743 bits (99), Expect = 2.011e-3
Identity = 44/168 (26.19%), Postives = 73/168 (43.45%), Query Frame = 0

Query:  231 RPLPKINNIIIPFSKNVWIGTFFSYFIVGGILSLVSCIYKSWRIHPEIKPAEKPLKWISRFEVSYGIPFGEGV---PNKWIGPYS-AFSIILTFWQLMAMVLILSYTCNLRSYLIVNPYERPIDSLEELKVSNYQFVVGLYEQIYAFADPYLRES-------MHYFLE 387
            +  P++ + + P S +VWI   F+Y +V  +L +++        +P   P       ++ F +   + F  G        I P S +  +I T W    +++I SYT NL ++L V   E PI+S E+L     Q   G  E        + R+S       MH F+E
Sbjct:  205 KQAPELFSFMHPLSLDVWIYMVFAYLLVSILLYILARFSPYEWDNP--YPCNDEEVLVNEFSLYNSLWFTIGSLMQQGSDIIPRSLSARLIATMWWFFTLIMISSYTANLAAFLTVERMESPIESAEDLS-KQTQIKYGCLES--GSTRAFFRDSKSVTFSRMHEFME 693

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BLAST of EMLSAG00000012262 vs. C. finmarchicus
Match: gi|592920895|gb|GAXK01037480.1| (TSA: Calanus finmarchicus comp682975_c0_seq5 transcribed RNA sequence)

HSP 1 Score: 42.3578 bits (98), Expect = 3.891e-3
Identity = 37/135 (27.41%), Postives = 64/135 (47.41%), Query Frame = 0

Query:  228 PRPRPLPKINNIIIPFSKNVWIGTFFSYFIVGGILSLVSCI--YKSWRIHPEIKPAEKPLKWISR-----FEVSYGIPFGEGVPNKWIGPYSAFSIILTFWQLMAMVLILSYTCNLRSYLIVNPYERPIDSLEEL 355
            P+ +P P + + + P S +VWI T  +Y  V  +L +++    Y+    HP  + AE  +   S      F +   +  G  +  K I    +  ++   W    +++I SYT NL ++L V   E PI+S E+L
Sbjct:  578 PQKKP-PDLFSFLSPLSLDVWIYTATAYLGVSILLFILARFSPYEWDNPHPCTEEAEVLVNEFSLCNSMWFTIGSLMQQGSDISPKAI----STRMVAGMWWFFTLIMISSYTANLAAFLTVERMESPIESAEDL 967

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BLAST of EMLSAG00000012262 vs. C. finmarchicus
Match: gi|592801816|gb|GAXK01152752.1| (TSA: Calanus finmarchicus comp3178010_c0_seq1 transcribed RNA sequence)

HSP 1 Score: 41.5874 bits (96), Expect = 4.512e-3
Identity = 52/237 (21.94%), Postives = 92/237 (38.82%), Query Frame = 0

Query:  148 IYSVCCDVLDSGPIRMGVLPPEEEHPMIQIIAQKIGFDFEIVPYVEWGGYSEANNNWTGI------TKNMVYMGPF-------DVKEFVTIVCPR--------PRPLPKINNIIIPFSKNVWIGTFFSYFIVGGILSLVSCIYK-SWRIHPEIKPAEKPLKWISRFEVSYGIPFGEGVPNKWIGPYSAFSIILTFWQ-LMAMVLILSYTCNLRSYLIVNPYERPIDSLEELKVSNYQ 361
            IY    D+L      +G +  +  H +     + + F   IVP   WG  +E +  W GI       +  + +  F        V  F   +C          P         I PF  ++WI  FF       +LS + C+   ++ + PE +       + +   V +G    +G    W+ P S  + I+ F   L  + L  SY+  L S+L V     P ++L+E++ +++ 
Sbjct:   17 IYGDNDDLLSGKQTAIGGIWGDVWHGL----EKTMNFSTRIVPGDGWGSLNE-DGTWNGIINGLIQNRTQIGIASFFYTQSRGTVAAFSPAICEGTDRMFIKYPGREASWTTYIDPFDSSLWISLFF-------LLSFIICLLSATYYLGPEQQENPDSFTFYNTAIVVFGSQIFQG---SWLDPKSISAKIIFFISFLFGVTLYASYSAKLISFLTVIKTTLPFNTLDEIRRTDFD 682

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BLAST of EMLSAG00000012262 vs. C. finmarchicus
Match: gi|592920898|gb|GAXK01037477.1| (TSA: Calanus finmarchicus comp682975_c0_seq2 transcribed RNA sequence)

HSP 1 Score: 42.3578 bits (98), Expect = 4.633e-3
Identity = 37/135 (27.41%), Postives = 64/135 (47.41%), Query Frame = 0

Query:  228 PRPRPLPKINNIIIPFSKNVWIGTFFSYFIVGGILSLVSCI--YKSWRIHPEIKPAEKPLKWISR-----FEVSYGIPFGEGVPNKWIGPYSAFSIILTFWQLMAMVLILSYTCNLRSYLIVNPYERPIDSLEEL 355
            P+ +P P + + + P S +VWI T  +Y  V  +L +++    Y+    HP  + AE  +   S      F +   +  G  +  K I    +  ++   W    +++I SYT NL ++L V   E PI+S E+L
Sbjct: 1860 PQKKP-PDLFSFLSPLSLDVWIYTATAYLGVSILLFILARFSPYEWDNPHPCTEEAEVLVNEFSLCNSMWFTIGSLMQQGSDISPKAI----STRMVAGMWWFFTLIMISSYTANLAAFLTVERMESPIESAEDL 2249

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BLAST of EMLSAG00000012262 vs. C. finmarchicus
Match: gi|592920899|gb|GAXK01037476.1| (TSA: Calanus finmarchicus comp682975_c0_seq1 transcribed RNA sequence)

HSP 1 Score: 42.3578 bits (98), Expect = 4.636e-3
Identity = 37/135 (27.41%), Postives = 64/135 (47.41%), Query Frame = 0

Query:  228 PRPRPLPKINNIIIPFSKNVWIGTFFSYFIVGGILSLVSCI--YKSWRIHPEIKPAEKPLKWISR-----FEVSYGIPFGEGVPNKWIGPYSAFSIILTFWQLMAMVLILSYTCNLRSYLIVNPYERPIDSLEEL 355
            P+ +P P + + + P S +VWI T  +Y  V  +L +++    Y+    HP  + AE  +   S      F +   +  G  +  K I    +  ++   W    +++I SYT NL ++L V   E PI+S E+L
Sbjct: 1877 PQKKP-PDLFSFLSPLSLDVWIYTATAYLGVSILLFILARFSPYEWDNPHPCTEEAEVLVNEFSLCNSMWFTIGSLMQQGSDISPKAI----STRMVAGMWWFFTLIMISSYTANLAAFLTVERMESPIESAEDL 2266

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BLAST of EMLSAG00000012262 vs. L. salmonis peptides
Match: EMLSAP00000012262 (pep:novel supercontig:LSalAtl2s:LSalAtl2s895:444:5506:-1 gene:EMLSAG00000012262 transcript:EMLSAT00000012262 description:"maker-LSalAtl2s895-snap-gene-0.13")

HSP 1 Score: 1106.66 bits (2861), Expect = 0.000e+0
Identity = 539/539 (100.00%), Postives = 539/539 (100.00%), Query Frame = 0

Query:    1 MKITLKIHASLQMIQSLCSKFSCQVWNIQENVKPSSLYKRMKFRDFWCEIFLIDDADLIPYIDCYDPKICSIVLMQKDIHGLLDMDAVLKTSQNRLLTPVILFSPTSNGDVQLSIWCPHCGTGLNKIGYWNNYGNYIVYQDPRYSLNIYSVCCDVLDSGPIRMGVLPPEEEHPMIQIIAQKIGFDFEIVPYVEWGGYSEANNNWTGITKNMVYMGPFDVKEFVTIVCPRPRPLPKINNIIIPFSKNVWIGTFFSYFIVGGILSLVSCIYKSWRIHPEIKPAEKPLKWISRFEVSYGIPFGEGVPNKWIGPYSAFSIILTFWQLMAMVLILSYTCNLRSYLIVNPYERPIDSLEELKVSNYQFVVGLYEQIYAFADPYLRESMHYFLERDRLIIKDSQIFLPDVVKPDQCSVQHSTSSYYMNYKSVKKDGIPQFHVAQVPFNSPFVSWYFKKPNLISTKMRENVARVMDSGMAMRFYKDNVPPLYKVKEESKIEAQSLDEVIILFIFLAGISAVSVLLLIFEITLTSTKNFLELSYSVYI 539
            MKITLKIHASLQMIQSLCSKFSCQVWNIQENVKPSSLYKRMKFRDFWCEIFLIDDADLIPYIDCYDPKICSIVLMQKDIHGLLDMDAVLKTSQNRLLTPVILFSPTSNGDVQLSIWCPHCGTGLNKIGYWNNYGNYIVYQDPRYSLNIYSVCCDVLDSGPIRMGVLPPEEEHPMIQIIAQKIGFDFEIVPYVEWGGYSEANNNWTGITKNMVYMGPFDVKEFVTIVCPRPRPLPKINNIIIPFSKNVWIGTFFSYFIVGGILSLVSCIYKSWRIHPEIKPAEKPLKWISRFEVSYGIPFGEGVPNKWIGPYSAFSIILTFWQLMAMVLILSYTCNLRSYLIVNPYERPIDSLEELKVSNYQFVVGLYEQIYAFADPYLRESMHYFLERDRLIIKDSQIFLPDVVKPDQCSVQHSTSSYYMNYKSVKKDGIPQFHVAQVPFNSPFVSWYFKKPNLISTKMRENVARVMDSGMAMRFYKDNVPPLYKVKEESKIEAQSLDEVIILFIFLAGISAVSVLLLIFEITLTSTKNFLELSYSVYI
Sbjct:    1 MKITLKIHASLQMIQSLCSKFSCQVWNIQENVKPSSLYKRMKFRDFWCEIFLIDDADLIPYIDCYDPKICSIVLMQKDIHGLLDMDAVLKTSQNRLLTPVILFSPTSNGDVQLSIWCPHCGTGLNKIGYWNNYGNYIVYQDPRYSLNIYSVCCDVLDSGPIRMGVLPPEEEHPMIQIIAQKIGFDFEIVPYVEWGGYSEANNNWTGITKNMVYMGPFDVKEFVTIVCPRPRPLPKINNIIIPFSKNVWIGTFFSYFIVGGILSLVSCIYKSWRIHPEIKPAEKPLKWISRFEVSYGIPFGEGVPNKWIGPYSAFSIILTFWQLMAMVLILSYTCNLRSYLIVNPYERPIDSLEELKVSNYQFVVGLYEQIYAFADPYLRESMHYFLERDRLIIKDSQIFLPDVVKPDQCSVQHSTSSYYMNYKSVKKDGIPQFHVAQVPFNSPFVSWYFKKPNLISTKMRENVARVMDSGMAMRFYKDNVPPLYKVKEESKIEAQSLDEVIILFIFLAGISAVSVLLLIFEITLTSTKNFLELSYSVYI 539

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BLAST of EMLSAG00000012262 vs. SwissProt
Match: gi|121438|sp|P26591.1|GLRK_LYMST (RecName: Full=Glutamate receptor; Flags: Precursor [Lymnaea stagnalis])

HSP 1 Score: 73.1738 bits (178), Expect = 2.902e-12
Identity = 83/327 (25.38%), Postives = 135/327 (41.28%), Query Frame = 0

Query:   77 KDIHGLLDMDAVLKTSQNRLLTPVILFSPTSNGDVQLSIWCPHCGTGLNKIGYWNNYGNYIVYQDPRYSLNI-----------------YSVCCDVLDSGPIRMGVLPPEEEH-PMIQIIAQKIGFDFEIVPYVEWGGYSE--ANNNWTGITKNMVY------MGPFDV-----------KEF----VTIVCPRPRPLPK-INNIIIPFSKNVWIGTFFSYFIVGGILSLVSCIYKSWRIHP-EIKPAEKPLKWISR-FEVSYGIPFGEGVPNKW---IGPYS-AFSIILTFWQLMAMVLILSYTCNLRSYLIVNPYERPIDSLEEL 355
            K  HG + ++ + K     +   V         D  L ++      G  KIGYWN     +   +PR   N                  Y +  +V+  G   +G  P E     + + +A+K+GFDF ++ +V+ G Y    +N  W GI   ++       + PF +           K F    ++I+  RP+P  K   + + P S  +W+   F+Y  V  +L LVS      R  P E   +E    +I+  F +S  + F  G   +    I P S +  I+ + W    +++I SYT NL ++L V     PIDS E+L
Sbjct:  348 KTGHGQMILEEMKKVKFEGVTGHVAFNEQGHRKDFTLGVYNVAMTRGTAKIGYWNEREGKLHAHNPRLFQNNSSDMNRTRIVTTIIKEPYVMVNNVIRDGKPLVGNEPVEGFCIDLTKAVAEKVGFDF-VIQFVKDGSYGSVLSNGTWDGIVGELIRHEADMAIAPFTITADRSRVIDFTKPFMSLGISIMIKRPQPAGKHFFSFMEPLSSEIWMCIVFAYIGVSVVLFLVS------RFSPNEWHLSEAHHSYIANDFSISNSLWFSLGAFMQQGCDISPRSMSGRIVGSVWWFFTLIIISSYTANLAAFLTVERMLTPIDSAEDL 667

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BLAST of EMLSAG00000012262 vs. SwissProt
Match: gi|2492627|sp|Q13002.1|GRIK2_HUMAN (RecName: Full=Glutamate receptor ionotropic, kainate 2; Short=GluK2; AltName: Full=Excitatory amino acid receptor 4; Short=EAA4; AltName: Full=Glutamate receptor 6; Short=GluR-6; Short=GluR6; Flags: Precursor)

HSP 1 Score: 58.9214 bits (141), Expect = 6.665e-8
Identity = 79/392 (20.15%), Postives = 163/392 (41.58%), Query Frame = 0

Query:  174 MIQIIAQKIGFDFEI--VPYVEWGGYSEANNNWTGITKNMV------YMGPFDV-----------KEFVT----IVCPRPRPL-PKINNIIIPFSKNVWIGTFFSYFIVGGILSLVSCI-----YKSWRIHPEIKPAEKPLKWISRFEVSYGIPFGEGVPNKWIGPYSAFSIILTFWQLMAMVLILSYTCNLRSYLIVNPYERPIDSLEEL----KVSNYQFVVGLYEQIYAFADPYLRESMHYFL--ERDRLIIKDSQIFLPDVVKPDQCSVQHSTSSYYMNYKSVKKDGIPQFHVAQ-VPFNSPFVSWYFKKPNLISTKMRENVARVMDSGMAMRFYKDNVPPLYKVKEESKIEAQSLDEVIILFIFLAGISAVSVLLLIFEITLTSTKN 529
            +++ ++  +GF +EI  V   ++G   +AN  W G+ + ++       + P  +           K F+T    I+  +P    P + + + P S ++W+    +Y  V  +L +++       Y     +P+    E     ++ F    G    +G  ++ +    +  I+   W    +++I SYT NL ++L V   E PIDS ++L    K+       G     +  +     + M  F+   R  +++K ++  +  V+  D   +  ST+  ++  ++     I     ++     +P  S Y  K  +   +++E     M   M  ++++ N  P  + KE S +  Q++  +   FI LA    +SV + + E    S KN
Sbjct:  466 LLRELSTILGFTYEIRLVEDGKYGAQDDANGQWNGMVRELIDHKADLAVAPLAITYVREKVIDFSKPFMTLGISILYRKPNGTNPGVFSFLNPLSPDIWMYILLAYLGVSCVLFVIARFSPYEWYNPHPCNPDSDVVENNFTLLNSFWFGVGALMQQG--SELMPKALSTRIVGGIWWFFTLIIISSYTANLAAFLTVERMESPIDSADDLAKQTKIEYGAVEDGATMTFFKKSKISTYDKMWAFMSSRRQSVLVKSNEEGIQRVLTSDYAFLMESTTIEFVTQRNCNLTQIGGLIDSKGYGVGTPMGSPYRDKITIAILQLQEEGKLHM---MKEKWWRGNGCPEEESKEASALGVQNIGGI---FIVLAAGLVLSVFVAVGEFLYKSKKN 849

[Close]

BLAST of EMLSAG00000012262 vs. SwissProt
Match: gi|3287965|sp|P42260.2|GRIK2_RAT (RecName: Full=Glutamate receptor ionotropic, kainate 2; Short=GluK2; AltName: Full=Glutamate receptor 6; Short=GluR-6; Short=GluR6; Flags: Precursor)

HSP 1 Score: 56.9954 bits (136), Expect = 2.600e-7
Identity = 78/392 (19.90%), Postives = 162/392 (41.33%), Query Frame = 0

Query:  174 MIQIIAQKIGFDFEI--VPYVEWGGYSEANNNWTGITKNMV------YMGPFDV-----------KEFVT----IVCPRPRPL-PKINNIIIPFSKNVWIGTFFSYFIVGGILSLVSCI-----YKSWRIHPEIKPAEKPLKWISRFEVSYGIPFGEGVPNKWIGPYSAFSIILTFWQLMAMVLILSYTCNLRSYLIVNPYERPIDSLEEL----KVSNYQFVVGLYEQIYAFADPYLRESMHYFL--ERDRLIIKDSQIFLPDVVKPDQCSVQHSTSSYYMNYKSVKKDGIPQFHVAQ-VPFNSPFVSWYFKKPNLISTKMRENVARVMDSGMAMRFYKDNVPPLYKVKEESKIEAQSLDEVIILFIFLAGISAVSVLLLIFEITLTSTKN 529
            +++ ++  +GF +EI  V   ++G   + N  W G+ + ++       + P  +           K F+T    I+  +P    P + + + P S ++W+    +Y  V  +L +++       Y     +P+    E     ++ F    G    +G  ++ +    +  I+   W    +++I SYT NL ++L V   E PIDS ++L    K+       G     +  +     + M  F+   R  +++K ++  +  V+  D   +  ST+  ++  ++     I     ++     +P  S Y  K  +   +++E     M   M  ++++ N  P  + KE S +  Q++  +   FI LA    +SV + + E    S KN
Sbjct:  466 LLRELSTILGFTYEIRLVEDGKYGAQDDVNGQWNGMVRELIDHKADLAVAPLAITYVREKVIDFSKPFMTLGISILYRKPNGTNPGVFSFLNPLSPDIWMYILLAYLGVSCVLFVIARFSPYEWYNPHPCNPDSDVVENNFTLLNSFWFGVGALMQQG--SELMPKALSTRIVGGIWWFFTLIIISSYTANLAAFLTVERMESPIDSADDLAKQTKIEYGAVEDGATMTFFKKSKISTYDKMWAFMSSRRQSVLVKSNEEGIQRVLTSDYAFLMESTTIEFVTQRNCNLTQIGGLIDSKGYGVGTPMGSPYRDKITIAILQLQEEGKLHM---MKEKWWRGNGCPEEESKEASALGVQNIGGI---FIVLAAGLVLSVFVAVGEFLYKSKKN 849

[Close]

BLAST of EMLSAG00000012262 vs. SwissProt
Match: gi|122065194|sp|P39087.4|GRIK2_MOUSE (RecName: Full=Glutamate receptor ionotropic, kainate 2; Short=GluK2; AltName: Full=Glutamate receptor 6; Short=GluR-6; Short=GluR6; AltName: Full=Glutamate receptor beta-2; Short=GluR beta-2; Flags: Precursor)

HSP 1 Score: 56.9954 bits (136), Expect = 2.715e-7
Identity = 78/392 (19.90%), Postives = 162/392 (41.33%), Query Frame = 0

Query:  174 MIQIIAQKIGFDFEI--VPYVEWGGYSEANNNWTGITKNMV------YMGPFDV-----------KEFVT----IVCPRPRPL-PKINNIIIPFSKNVWIGTFFSYFIVGGILSLVSCI-----YKSWRIHPEIKPAEKPLKWISRFEVSYGIPFGEGVPNKWIGPYSAFSIILTFWQLMAMVLILSYTCNLRSYLIVNPYERPIDSLEEL----KVSNYQFVVGLYEQIYAFADPYLRESMHYFL--ERDRLIIKDSQIFLPDVVKPDQCSVQHSTSSYYMNYKSVKKDGIPQFHVAQ-VPFNSPFVSWYFKKPNLISTKMRENVARVMDSGMAMRFYKDNVPPLYKVKEESKIEAQSLDEVIILFIFLAGISAVSVLLLIFEITLTSTKN 529
            +++ ++  +GF +EI  V   ++G   + N  W G+ + ++       + P  +           K F+T    I+  +P    P + + + P S ++W+    +Y  V  +L +++       Y     +P+    E     ++ F    G    +G  ++ +    +  I+   W    +++I SYT NL ++L V   E PIDS ++L    K+       G     +  +     + M  F+   R  +++K ++  +  V+  D   +  ST+  ++  ++     I     ++     +P  S Y  K  +   +++E     M   M  ++++ N  P  + KE S +  Q++  +   FI LA    +SV + + E    S KN
Sbjct:  466 LLRELSTILGFTYEIRLVEDGKYGAQDDVNGQWNGMVRELIDHKADLAVAPLAITYVREKVIDFSKPFMTLGISILYRKPNGTNPGVFSFLNPLSPDIWMYILLAYLGVSCVLFVIARFSPYEWYNPHPCNPDSDVVENNFTLLNSFWFGVGALMQQG--SELMPKALSTRIVGGIWWFFTLIIISSYTANLAAFLTVERMESPIDSADDLAKQTKIEYGAVEDGATMTFFKKSKISTYDKMWAFMSSRRQSVLVKSNEEGIQRVLTSDYAFLMESTTIEFVTQRNCNLTQIGGLIDSKGYGVGTPMGSPYRDKITIAILQLQEEGKLHM---MKEKWWRGNGCPEEESKEASALGVQNIGGI---FIVLAAGLVLSVFVAVGEFLYKSKKN 849

[Close]

BLAST of EMLSAG00000012262 vs. SwissProt
Match: gi|122063506|sp|Q38PU3.1|GRIK2_MACFA (RecName: Full=Glutamate receptor ionotropic, kainate 2; Short=GluK2; AltName: Full=Glutamate receptor 6; Short=GluR-6; Short=GluR6; Flags: Precursor)

HSP 1 Score: 56.225 bits (134), Expect = 4.917e-7
Identity = 78/392 (19.90%), Postives = 162/392 (41.33%), Query Frame = 0

Query:  174 MIQIIAQKIGFDFEI--VPYVEWGGYSEANNNWTGITKNMV------YMGPFDV-----------KEFVT----IVCPRPRPL-PKINNIIIPFSKNVWIGTFFSYFIVGGILSLVSCI-----YKSWRIHPEIKPAEKPLKWISRFEVSYGIPFGEGVPNKWIGPYSAFSIILTFWQLMAMVLILSYTCNLRSYLIVNPYERPIDSLEEL----KVSNYQFVVGLYEQIYAFADPYLRESMHYFL--ERDRLIIKDSQIFLPDVVKPDQCSVQHSTSSYYMNYKSVKKDGIPQFHVAQ-VPFNSPFVSWYFKKPNLISTKMRENVARVMDSGMAMRFYKDNVPPLYKVKEESKIEAQSLDEVIILFIFLAGISAVSVLLLIFEITLTSTKN 529
            +++ ++  +GF +EI  V   ++G   +AN  W G+ + ++       + P  +           K F+T    I+  +P    P + + + P S ++W+    +   V  +L +++       Y     +P+    E     ++ F    G    +G  ++ +    +  I+   W    +++I SYT NL ++L V   E PIDS ++L    K+       G     +  +     + M  F+   R  +++K ++  +  V+  D   +  ST+  ++  ++     I     ++     +P  S Y  K  +   +++E     M   M  ++++ N  P  + KE S +  Q++  +   FI LA    +SV + + E    S KN
Sbjct:  466 LLRELSTILGFTYEIRLVEDGKYGAQDDANGQWNGMVRELIDHKADLAVAPLAITYVREKVIDFSKPFMTLGISILYRKPNGTNPGVFSFLNPLSPDIWMYVLLACLGVSCVLFVIARFSPYEWYNPHPCNPDSDVVENNFTLLNSFWFGVGALMRQG--SELMPKALSTRIVGGIWWFFTLIIISSYTANLAAFLTVERMESPIDSADDLAKQTKIEYGAVEDGATMTFFKKSKISTYDKMWAFMSSRRQSVLVKSNEEGIQRVLTSDYAFLMESTTIEFVTQRNCNLTQIGGLIDSKGYGVGTPMGSPYRDKITIAILQLQEEGKLHM---MKEKWWRGNGCPEEESKEASALGVQNIGGI---FIVLAAGLVLSVFVAVGEFLYKSKKN 849

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BLAST of EMLSAG00000012262 vs. Select Arthropod Genomes
Match: EFX80846.1 (hypothetical protein DAPPUDRAFT_317967 [Daphnia pulex])

HSP 1 Score: 58.151 bits (139), Expect = 2.039e-8
Identity = 42/150 (28.00%), Postives = 72/150 (48.00%), Query Frame = 0

Query:  221 EFVTIVCPRPRPLPKINNIIIPFSKNVWIGTFFSYFIVGGILSLVSCIYKSWRIHPEIKPAEKPLKWISRFEVSYGIPF------------GEGVPNKWIGPYSAFSIILTFWQLMAMVLILSYTCNLRSYLIVNPYERPIDSLEELKVS 358
            E + +V PRP   P+I   + PF   VW+  F + F V   +++ S IY  W++   + P +  L   + F +   I +            G  +P + +    +F I++  W L+A VL+ SY+  + SYL V   + PI++ E+L  S
Sbjct:   50 EPLAMVVPRPGEEPRIFAFVHPFQSTVWLLIFIACFTVVVFMTIFSGIY--WKLFLILDPGDASLT--TNFTIYGRITYYSIYMANTVTNQGNAIPLRRL----SFRILVGVWVLVATVLVNSYSSTVTSYLTVPKMKPPINTFEDLVAS 191

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BLAST of EMLSAG00000012262 vs. nr
Match: gi|325120988|ref|NP_001191398.1| (glutamate receptor subunit protein GluR3 precursor [Aplysia californica] >gi|31074381|gb|AAP41205.1| glutamate receptor subunit protein GluR3 [Aplysia californica])

HSP 1 Score: 63.1586 bits (152), Expect = 9.125e-7
Identity = 73/295 (24.75%), Postives = 122/295 (41.36%), Query Frame = 0

Query:  110 DVQLSIWCPHCGTGLNKIGYWNNYGNYIVYQDPRY-------SLNIYSVCCDVLDSGPIRMGVLPPEEEHPMIQI-------------IAQKIGFDFEIVPYVEWGGYSE--ANNNWTGITKNMVY------MGPFDV-----------KEF----VTIVCPRPRPLPK-INNIIIPFSKNVWIGTFFSYFIVGGILSLVSCIYKSWRIHP-EIKPAEKPLKWISRFEVSYGIPFGEGVPNKW---IGPYS-AFSIILTFWQLMAMVLILSYTCNLRSYLIVNPYERPIDSLEEL 355
            D  L I+         K+G+W+     +  Q PR        + N   +   ++   P  M    P+   P++ +             +A+K+GFD+ I  +V+ G Y    +N +W GI   ++       + PF +           K F    ++I+  RP+P  K   + + P S  +W+   F+Y  V  +L LVS      R  P E   +E      + F +S  + F  G   +    I P S +  I+ + W    +++I SYT NL ++L V     PIDS E+L
Sbjct:  381 DFTLDIYNVAMARRAAKVGFWSQREGRVHMQPPRLVPNPEETNENRTRIVVTIIKE-PYVMWKGAPKNGEPLVAVEHLEGFCIDLTKAVAEKVGFDYAI-RFVKDGSYGSVLSNGSWDGIVGELIAHEAHMAIAPFTITADRSRVIDFTKPFMSLGISIMIKRPQPAGKHFFSFMEPLSYEIWMCIVFAYIGVSVVLFLVS------RFSPNEWHLSETEHSIANDFSISNSLWFSLGAFMQQGCDISPRSMSGRIVGSVWWFFTLIIISSYTANLAAFLTVERMLTPIDSAEDL 667

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BLAST of EMLSAG00000012262 vs. Tigriopus kingsejongenis genes
Match: maker-scaffold147_size311475-snap-gene-2.17 (protein:Tk08610 transcript:maker-scaffold147_size311475-snap-gene-2.17-mRNA-1 annotation:"PREDICTED: LOW QUALITY PROTEIN: uncharacterized protein LOC103579583")

HSP 1 Score: 55.0694 bits (131), Expect = 4.652e-8
Identity = 60/242 (24.79%), Postives = 105/242 (43.39%), Query Frame = 0

Query:  186 FEIVPYVEWGGYSEANNNWTGITKNMVYMG------PFDVKEF--------------------VTIVCPRPRPLP-KINNIIIPFSKNVWIGTFFSYFIVGGILSLVSCIYKSWRIHP-----EIKPAEKPLKWISRFEVSYGIPFGEGVPNKWIGPYSAFSIILT-FWQLMAMVLILSYTCNLRSYLIVNPYERPIDSLEELKVSNY-QFVV---GLYEQIYAFADPYLRESMHYFLERDR 390
            F++V    +GG  E + NW G+ +  V MG       F V +                     ++IV  +PR  P  + + + PF+  +WI T  SY +V  +L +++        +P     E +  E      + F  + G    +G     + P +  + +L   W   AM+++ SYT NL ++L V   E+PI+S E+L      +F V   G  E  +A A+    ++M  F++ +R
Sbjct: 1388 FKLVDDERYGGVDE-HGNWDGMVQE-VLMGQEDGGADFAVADLSVTSVRAGAVDFSMPWMNLGISIVFIKPRQAPPSLLSFLSPFTTEIWIYTGLSYVLVSVVLYILAQFCPQEWNNPLPCIEEPEELENQFSLANSFWFTIGTFLQQGCD---VAPIAISTRLLGGMWFFFAMIMVASYTANLAAFLTVETLEKPIESAEDLAAQTLIKFGVLEGGSTESFFANAELEPFKTMWEFMDMNR 1624

The following BLAST results are available for this feature:

BLAST of EMLSAG00000012262 vs. GO
BLAST of EMLSAG00000012262 vs. C. finmarchicus
BLAST of EMLSAG00000012262 vs. L. salmonis peptides
BLAST of EMLSAG00000012262 vs. SwissProt
BLAST of EMLSAG00000012262 vs. Select Arthropod Genomes
BLAST of EMLSAG00000012262 vs. nr
BLAST of EMLSAG00000012262 vs. Tigriopus kingsejongenis genes

BLAST of EMLSAG00000012262 vs. GO
Analysis Date: 2014-04-02 (Blast vs. GO)
Total hits: 25


Match Name	E-value	Identity	Description
-	3.692e-7	19.90	symbol:Grik2 "Glutamate receptor ionotropic, kaina...	[more]
-	6.269e-7	19.90	symbol:GRIK2 "Glutamate receptor ionotropic, kaina...	[more]
-	2.568e-6	24.38	symbol:gria4b "glutamate receptor, ionotropic, AMP...	[more]
-	8.925e-6	20.72	symbol:GRIK3 "Glutamate receptor ionotropic, kaina...	[more]
-	1.000e-5	20.72	symbol:Grik3 "Glutamate receptor ionotropic, kaina...	[more]
-	1.004e-5	20.72	symbol:Grik3 "glutamate receptor, ionotropic, kain...	[more]
-	1.048e-5	20.72	symbol:Grik3 "Glutamate receptor ionotropic, kaina...	[more]
-	1.048e-5	20.72	symbol:Grik3 "glutamate receptor, ionotropic, kain...	[more]
-	1.066e-5	20.72	symbol:GRIK3 "Uncharacterized protein" species:961...	[more]
-	1.085e-5	20.72	symbol:GRIK3 "Glutamate receptor ionotropic, kaina...	[more]

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BLAST of EMLSAG00000012262 vs. C. finmarchicus
Analysis Date: 2014-05-09 (TblastN vs C. finmarchicus TSA)
Total hits: 25


Match Name	E-value	Identity	Description
gi\|592947443\|gb\|GAXK01011110.1\|	4.550e-9	26.29	TSA: Calanus finmarchicus comp3776687_c0_seq1 tran...	[more]
gi\|592920893\|gb\|GAXK01037482.1\|	2.663e-4	21.86	TSA: Calanus finmarchicus comp682975_c0_seq7 trans...	[more]
gi\|592920896\|gb\|GAXK01037479.1\|	2.743e-4	26.81	TSA: Calanus finmarchicus comp682975_c0_seq4 trans...	[more]
gi\|592920897\|gb\|GAXK01037478.1\|	3.899e-4	26.81	TSA: Calanus finmarchicus comp682975_c0_seq3 trans...	[more]
gi\|592767825\|gb\|GAXK01186743.1\|	1.836e-3	24.22	TSA: Calanus finmarchicus comp3401914_c0_seq1 tran...	[more]
gi\|592949771\|gb\|GAXK01008782.1\|	2.011e-3	26.19	TSA: Calanus finmarchicus comp3549707_c0_seq1 tran...	[more]
gi\|592920895\|gb\|GAXK01037480.1\|	3.891e-3	27.41	TSA: Calanus finmarchicus comp682975_c0_seq5 trans...	[more]
gi\|592801816\|gb\|GAXK01152752.1\|	4.512e-3	21.94	TSA: Calanus finmarchicus comp3178010_c0_seq1 tran...	[more]
gi\|592920898\|gb\|GAXK01037477.1\|	4.633e-3	27.41	TSA: Calanus finmarchicus comp682975_c0_seq2 trans...	[more]
gi\|592920899\|gb\|GAXK01037476.1\|	4.636e-3	27.41	TSA: Calanus finmarchicus comp682975_c0_seq1 trans...	[more]

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BLAST of EMLSAG00000012262 vs. L. salmonis peptides
Analysis Date: 2014-05-10 (Blastp vs. self)
Total hits: 1


Match Name	E-value	Identity	Description
EMLSAP00000012262	0.000e+0	100.00	pep:novel supercontig:LSalAtl2s:LSalAtl2s895:444:5...	[more]

BLAST of EMLSAG00000012262 vs. SwissProt
Analysis Date: 2017-02-10 (Blastp vs. SwissProt)
Total hits: 5


Match Name	E-value	Identity	Description
gi\|121438\|sp\|P26591.1\|GLRK_LYMST	2.902e-12	25.38	RecName: Full=Glutamate receptor; Flags: Precursor...	[more]
gi\|2492627\|sp\|Q13002.1\|GRIK2_HUMAN	6.665e-8	20.15	RecName: Full=Glutamate receptor ionotropic, kaina...	[more]
gi\|3287965\|sp\|P42260.2\|GRIK2_RAT	2.600e-7	19.90	RecName: Full=Glutamate receptor ionotropic, kaina...	[more]
gi\|122065194\|sp\|P39087.4\|GRIK2_MOUSE	2.715e-7	19.90	RecName: Full=Glutamate receptor ionotropic, kaina...	[more]
gi\|122063506\|sp\|Q38PU3.1\|GRIK2_MACFA	4.917e-7	19.90	RecName: Full=Glutamate receptor ionotropic, kaina...	[more]

BLAST of EMLSAG00000012262 vs. Select Arthropod Genomes
Analysis Date: 2017-02-20 (Blastp vs. Selected Arthropods)
Total hits: 1


Match Name	E-value	Identity	Description
EFX80846.1	2.039e-8	28.00	hypothetical protein DAPPUDRAFT_317967 [Daphnia pu...	[more]

BLAST of EMLSAG00000012262 vs. nr
Analysis Date: 2017-02-20 (Blastp vs. NR (2/2017))
Total hits: 1


Match Name	E-value	Identity	Description
gi\|325120988\|ref\|NP_001191398.1\|	9.125e-7	24.75	glutamate receptor subunit protein GluR3 precursor...	[more]

BLAST of EMLSAG00000012262 vs. Tigriopus kingsejongenis genes
Analysis Date: 2018-04-18 (Blastp vs. Tigriopus kingsejongensis proteins)
Total hits: 1


Match Name	E-value	Identity	Description
maker-scaffold147_size311475-snap-gene-2.17	4.652e-8	24.79	protein:Tk08610 transcript:maker-scaffold147_size3...	[more]

Alignments

The following features are aligned


Aligned Feature	Feature Type	Alignment Location
LSalAtl2s895	supercontig	LSalAtl2s895:444..5506 -

Analyses

This gene is derived from or has results from the following analyses


Analysis Name	Date Performed
ensembl	2013-09-26 .965016
Blast vs. GO	2014-04-02
TblastN vs C. finmarchicus TSA	2014-05-09
Blastp vs. self	2014-05-10
Blastp vs. SwissProt	2017-02-10
Blastp vs. Selected Arthropods	2017-02-20
Blastp vs. NR (2/2017)	2017-02-20
Blastp vs. Tigriopus kingsejongensis proteins	2018-04-18

Properties


Property Name	Value
Logic name	ensemblgenomes
Description	maker-LSalAtl2s895-snap-gene-0.13
Biotype	protein_coding
Evidence	IEA
Note	Glutamate receptor

Cross References

External references for this gene


Database	Accession
Ensembl Metazoa (gene)	EMLSAG00000012262 (primary cross-reference)

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Species	Type
EMLSAT00000012262	EMLSAT00000012262-708109	Lepeophtheirus salmonis	mRNA

Sequences

The following sequences are available for this feature:

gene from alignment at LSalAtl2s895:444..5506-

gene from alignment at LSalAtl2s895:444..5506-

Legend: mRNA

Hold the cursor over a type above to highlight its positions in the sequence below.

>EMLSAG00000012262-695028 ID=EMLSAG00000012262-695028|Name=EMLSAG00000012262|organism=Lepeophtheirus salmonis|type=gene|length=5063bp|location=Sequence derived from alignment at LSalAtl2s895:444..5506- (Lepeophtheirus salmonis)
ATGAAAATAACTTTAAAAATACATGCAAGGTATGTTTGGTATCGTCAGAA
ATATTTCAATTAAAGAGACTCGACGAGAAAGACAATCAAAAGATCAGAGA
ATTAAAAAGTTAGAATCTTAAGTTAATCTTAAATCTTAAGATATCCTTGT
TTGGCTCCTTTTTTATTTTCAAAAAACGTCTCTTGATCCTCGTACCTCAG
AATTGTTCGGAACCTTGCTAAAATAATTGGAACCATTCTTATGATAAATT
AGCCAAATCCTTTTTGGTATAGCCTACGGATGACATATTCTCGGGAAAGT
GTATTGAATGCTTTGGCAATGTCTATGGCAATTACAGACAGGTTTTTCTC
TGATTTGAGTAAAGTTTGTACTGAAAAGGGTACGTTGTCCATTAGATTAT
CTTTTAAGAATTTGGAGTGAAGTCGTGAATTTTATAGATCTTTGATGTTA
TCCATTTCAAGCTTGACTCCGTACAGTAAATCTTATCTCTGAATAACGTG
TCTAATTTCGTTCTTTTTCCTTGTAACGAAGCTGGGTATTTACCAATGTT
GACTAATTCATCTATATCTCTAGCATGTGCATAGGAGTTTATTGCACCTG
GTCCACGATTTAATTCTTTTGAGCATCATTTCGTATTCAGAAAAAACATC
AACACCTTACTTAATATTTGCACATGTGTCCTCACTGATGTTTATAACTG
CACTGTTTAAGAATTCTTCTTCCAAAAGTCGATGGTTGATATTCCAGAGG
CCCTTGTTCCTCAGTTCCCTGTCGTGTGGGGCAAATTAAATAAATAAAGC
CTTATGATCAGAGTGTTCCAGACTTTGTACGTTTTAAGAGAACTTATCTG
AAAGCCTGTAAAAATTAATAAATCTATCCTCGAAGATGTAGGCCTTGAAT
ATCTGAAATATTAATTACATGTTAAACTTTTAATTTAATGCATTTACTTT
ATTAAAATATCAAAATTATTTTGCACTCTCCTCAAGCATAAAAAAAGATT
GTGTTCCATATTCATTAAAGGGATCTCTTAAAATGAAGAATATTTATATT
CATAAAGCAAAGTATGTCTGTCTGTCTGGATGTTTGCCTATACCTCATTT
TTAAGTGATACTACTTGATTTAAAGAAATAACAGTATAGCAAAAAAATGA
TAAAACAATTTATATATATTAATAGAAAACGGAAGTACAAAAATTATTGT
TTGAAAAAAGTCCTTCAGTATATATGTTTGCAATTTTTAATAATTTTTAG
AATTTTGTAGTATTCTTTTTTTAAATTTTCTATAAAATAATTATATCTAT
TAAATACATGATTAAATTAAAACTTGGGAATATCTATATTGATAAAATAA
ATATGTCTTACTTTTTTCGACGCCTTATAACTCTAAGCAATTCCGGTTAC
TCACGCTAGTAAAATAATAGAGAAAAGGAAACAGTACCATAGAATTTGCA
TGATTGCTTATTCTAAGCGTTACAATATTTTAAATTTTTCTCGAATAAGT
TGATATAATTTTATCGAAATTCAAAACTAACTTATAGCAAAAGAATCAGC
AATTATTGAAATGATGAATGAAATGGTAAGTTAGAGCATAATTGACTTTA
TAAATACAAAAATATTTATTCTCCAATAAATTACTTTAACTCTTTAATAT
CAGTTTTTATCCAATATATCCGAGAAAAATATAAGAAAAATAATTTGTAT
TATATTATTATTCAATTGTAATGTATTTAAATAGTCTCACTATAATATTT
TCGATAAAAAAATAAATGTTGCTACTATCTTTTATCTCATTGCTAATAAA
CATAAATTATTTATCGAAAATGTAACTGAAATTGTCTTTCTTTTACAAGC
ATTCAATTTATTTGTGCTTTCGACAATATATCATTACTTATTTAAATTTC
AATTTTGTTAAATAACATATTATCCTTAAATGTAATCAATTGAATCTATC
TATTAAAAGGATTTCATCAATTGTGGACAGGTCAACTCTTTCACTAAATA
CTTTTATTTAATTTCATGTCCACAATTTCCAACAAATTATTTACGCTTTT
ATTCCAATACGATTATATCGTCAAACTCACATATAAGATTTTTGTTCCTA
AAATTGAGGGTTCCTTGTTAGCATTTGTAAAAATATATGGATATCTACAT
ATGTAAAATTATACATATTCCATACCTATGTATCAATTATAGTAATTTAT
TTGCTTATTCTTTCATTAATCTAGGTATATGTAAACACATAAATTTGAAT
ACCGATGAACAAATTTGTAGTCATTTGAATTGGATTTCCTCACGAGCATG
GACACACTCAATTATAACTTTATTTCTGAATATCTAGCGGATGATTTAGT
TTATCGGCTCAAAGGGRTATCAGCTCCTCAATTTGATCAATCTTGTAGTT
TGATCATTTTAGCTTCCTTGAGGTGTAGTTTCATTTATTGGTTTCAAGAG
GTTTCATTCATTTTATGCACTAATTTTTTGACAGTTTGCAAATGATTCAA
AGTTTATGTAGTAAATTCTCATGTCAAGTTTGGAATATACAGGAAAATGT
GAAACCCTCTTCACTCTATAAGCGCATGAAATTTAGGGACTTTTGGTGCG
AAATTTTTCTTATTGATGATGCCGATCTTATCCCTTACATTGATTGCTAT
GATCCAAAAATATGTAGTATTGTCCTAATGCAGGTACTTTATCATAAAAA
TGAATATTTGCATTATGATTTGTTCTGATTTGACTATTATAATGTGAAAT
AGAAGGATATACATGGATTGTTAGATATGGACGCTGTTTTAAAGACATCA
CAGAATAGATTATTAACCCCTGTCATTCTTTTCTCTCCTACTTCTAATGG
TGACGTTCAGTTGTCGATTTGGTGTCCACATTGTGGTACAGGTTTGAATA
AAATTGGATATTGGAATAATTATGGGAATTACATAGTATACCAAGATCCC
CGTTACTCACTCAACATATATAGTGTGTGCTGTGATGTTCTCGATTCTGG
GCCTATTCGAATGGGTGTTTTACCTCCTGAAGAAGAACATCCCATGGTAC
ATTGGGGGATGGAATGGTAGTTATTACTTCTTACTATTATATTAAATTAT
ATATATTTAAAAGATTCAAATTATAGGTACAAAGGGAAATATAAAATTGT
TCAAACAGGACTTGTTTATGCTCCTTTTTTCTACATAGCTCAAAAAATTG
GATTTGATTTTGAGATAGTTCCCTATGTTGAATGGGGAGGCTACAGCGAA
GCTAATAATAATTGGACGGGAATTACAAAAAACATGGTGTATAATGATAC
TATAKACTTCATTTCCTATGCCTCACTTCGCTCTGTCATTAATGAAACTA
GTGGAAATGTTGCTGATGAACTTGAGGTTTCGATCACTTAATAAAAAAAT
GATATAAAATGTTTACCATTTCCAGGTGTACATGGGACCTTTTGATGTTA
AAGAATTTGTTACTATTGTTTGCCCTCGTCCGAGGCCCTTACCAAAGATA
AATAATATTATCATCCCTTTTTCAAAAAATGTCTGGATAGGAACCTTTTT
TAGTTATTTCATTGTTGGAGGAATACTTAGCCTTGTGTCTTGTATTTATA
AAAGTTGGAGAATACACCCTGAGGTATGCATAAAAAATATATACATTGTA
ACTAAAGANTGTACATTTTTACTTAAATATTAAATTATTTCGTGATTAAG
ATCAAACCAGCTGAAAAACCCCTGAAATGGATAAGTAGATTTGAAGTATC
CTACGGGATACCATTTGGAGAAGGAGTTCCTAATAAATGGATAGGACCTT
ACTCTGCATTTTCTATAATTTTGACTTTTTGGCAGCTGATGGCCATGGTT
CTAATTCTTTCATACACTTGTAACCTAAGGTAAATAAAAAATTAACAACA
TTTCATAATTGAGGAATAAATTTCATTTTATGCCTGCTAAGGTCATATCT
CATTGTAAACCCGTATGAACGTCCCATAGATAGTCTTGAGGAGTTAAAAG
TCTCAAATTATCAATTTGTCGTTGGGCTATACGAACAAATTTATGCCTTT
GCTGACCCCTATTTGAGAGAATCTATGCACTACTTTCTAGAGAGGGATCG
GTTAATCATCAAAGATAGTCAAATTTTCCTTCCAGATGTAGTGAAACCCG
ATCAATGTTCTGTTCAGCATTCAACATCAAGTTACTACATGAACTACAAA
AGTGTAAAAAAGGACGGCATCCCTCAATTCCATGTGGCCCAAGTACCATT
TAATTCCCCGTTTGTGTCATGGTATTTTAAAAAACCCAATTTGATATCCA
CAAAAATGAGAGAGAATGTAGCAAGAGTTATGGACTCTGGGATGGCAATG
CGTTTTTATAAGGATAATGTTCCTCCTCTTTATAAGGTTAATAATTTATA
AATTCAAAACAATGTTTATCCGAAAAATATCTATTATACATATACTTTTA
TAATAGGTGAAGGAAGAGAGTAAAATTGAAGCTCAGAGTTTGGATGAAGT
CATTATTTTATTTATTTTTTTAGCAGGAATTTCTGCTGTGTCTGTTCTCT
TATTAATTTTTGAAATAACTTTGGTATATATCCAATGATAATAAGAAAGT
AATGATAAAGGTGTCAAGGAAAATCAACAAACAATAATATTTTCTTCTTT
GTTTGCATCAAAATACAATTAAAAAAAAAAAATACATTGAGTCTCTTATT
TTTCATTCTAAACTTACGAATTTGTATATATTTTTTATAAATTTTCTAAT
AATGTTTACTATATTTGTTACTATGACCAGGGTAGTGGTTGTCTTCCCAA
AGAAGTAAGTCACACGTAGGCTGCAAGAAGTTCTCACCTAAATATAAATC
AACTTCTACAATAGGTTATACAAAGCTTTTTGATTTGAAAACAAAAATAT
ATTTATTATATTTAATAACAGACCTCAACGAAAAACTTTTTAGGTAATTT
GGCTCTCTCAAACCAAAAGTAATTCTTTGTATGGGGAAAAACTATTTCAT
AAAATCGTAACAAATGAATATTTCATTATTTTTAAAGAATTGTCCTACTC
AGTGTACATATAA

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