EMLSAG00000012965, EMLSAG00000012965-695731 (gene) Lepeophtheirus salmonis

Overview


Name	EMLSAG00000012965
Unique Name	EMLSAG00000012965-695731
Type	gene
Organism	Lepeophtheirus salmonis (salmon louse)

Associated RNAi Experiments

Nothing found

Homology

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BLAST of EMLSAG00000012965 vs. GO
Match: - (symbol:VDR "Vitamin D3 receptor" species:9913 "Bos taurus" [GO:0000122 "negative regulation of transcription from RNA polymerase II promoter" evidence=IEA] [GO:0000902 "cell morphogenesis" evidence=IEA] [GO:0001501 "skeletal system development" evidence=IEA] [GO:0003707 "steroid hormone receptor activity" evidence=IEA] [GO:0005634 "nucleus" evidence=IEA] [GO:0006816 "calcium ion transport" evidence=IEA] [GO:0006874 "cellular calcium ion homeostasis" evidence=IEA] [GO:0007595 "lactation" evidence=IEA] [GO:0008270 "zinc ion binding" evidence=IEA] [GO:0008434 "calcitriol receptor activity" evidence=IEA] [GO:0009887 "organ morphogenesis" evidence=IEA] [GO:0010839 "negative regulation of keratinocyte proliferation" evidence=IEA] [GO:0010980 "positive regulation of vitamin D 24-hydroxylase activity" evidence=IEA] [GO:0038186 "lithocholic acid receptor activity" evidence=IEA] [GO:0043565 "sequence-specific DNA binding" evidence=IEA] [GO:0045618 "positive regulation of keratinocyte differentiation" evidence=IEA] [GO:0045944 "positive regulation of transcription from RNA polymerase II promoter" evidence=IEA] [GO:0046697 "decidualization" evidence=IEA] [GO:0046965 "retinoid X receptor binding" evidence=IEA] [GO:0050892 "intestinal absorption" evidence=IEA] [GO:0060058 "positive regulation of apoptotic process involved in mammary gland involution" evidence=IEA] [GO:0060558 "regulation of calcidiol 1-monooxygenase activity" evidence=IEA] [GO:0060745 "mammary gland branching involved in pregnancy" evidence=IEA] [GO:0070644 "vitamin D response element binding" evidence=IEA] [GO:1902098 "calcitriol binding" evidence=IEA] [GO:1902121 "lithocholic acid binding" evidence=IEA] InterPro:IPR000324 InterPro:IPR000536 InterPro:IPR001628 InterPro:IPR001723 InterPro:IPR008946 InterPro:IPR013088 Pfam:PF00104 Pfam:PF00105 PRINTS:PR00047 PRINTS:PR00350 PRINTS:PR00398 PROSITE:PS00031 PROSITE:PS51030 SMART:SM00399 SMART:SM00430 GO:GO:0005634 GO:GO:0043565 GO:GO:0003707 GO:GO:0008270 Gene3D:1.10.565.10 Gene3D:3.30.50.10 SUPFAM:SSF48508 GO:GO:0045944 GO:GO:0000122 GO:GO:0009887 GO:GO:0006366 GO:GO:0001501 GO:GO:0006816 GO:GO:0006874 GO:GO:0050892 GO:GO:0000902 GO:GO:0045618 GO:GO:0007595 GO:GO:0060058 GO:GO:0046697 GO:GO:0010839 GO:GO:0010980 GeneTree:ENSGT00720000108423 GO:GO:0060745 TreeFam:TF316304 GO:GO:0070644 KO:K08539 GO:GO:0008434 OMA:FCQFRPP OrthoDB:EOG79KPF8 UniGene:Bt.61412 GeneID:533656 KEGG:bta:533656 CTD:7421 GO:GO:1902098 GO:GO:1902121 GO:GO:0038186 GO:GO:0060558 EMBL:DAAA02012986 RefSeq:XP_005206448.1 Ensembl:ENSBTAT00000021832 Uniprot:G5E5J5)

HSP 1 Score: 53.5286 bits (127), Expect = 3.777e-6
Identity = 18/49 (36.73%), Postives = 32/49 (65.31%), Query Frame = 0

Query:   27 NKNCVVTKHTRKHCQYCRFVKCLSVGMKSSWVMTEEDKKEKKEKAFIKK 75
            N +C +TK  R+HCQ CR  +C+ +GM   +++T+E+ + K+E    +K
Sbjct:   63 NGDCRITKDNRRHCQACRLKRCIDIGMMKEFILTDEEVQRKREMILKRK 111

[Close]

BLAST of EMLSAG00000012965 vs. GO
Match: - (symbol:VDR "Vitamin D3 receptor" species:9913 "Bos taurus" [GO:0000122 "negative regulation of transcription from RNA polymerase II promoter" evidence=IEA] [GO:0000902 "cell morphogenesis" evidence=IEA] [GO:0001501 "skeletal system development" evidence=IEA] [GO:0003707 "steroid hormone receptor activity" evidence=IEA] [GO:0005634 "nucleus" evidence=IEA] [GO:0006816 "calcium ion transport" evidence=IEA] [GO:0006874 "cellular calcium ion homeostasis" evidence=IEA] [GO:0007595 "lactation" evidence=IEA] [GO:0008270 "zinc ion binding" evidence=IEA] [GO:0008434 "calcitriol receptor activity" evidence=IEA] [GO:0009887 "organ morphogenesis" evidence=IEA] [GO:0010839 "negative regulation of keratinocyte proliferation" evidence=IEA] [GO:0010980 "positive regulation of vitamin D 24-hydroxylase activity" evidence=IEA] [GO:0038186 "lithocholic acid receptor activity" evidence=IEA] [GO:0043565 "sequence-specific DNA binding" evidence=IEA] [GO:0045618 "positive regulation of keratinocyte differentiation" evidence=IEA] [GO:0045944 "positive regulation of transcription from RNA polymerase II promoter" evidence=IEA] [GO:0046697 "decidualization" evidence=IEA] [GO:0046965 "retinoid X receptor binding" evidence=IEA] [GO:0050892 "intestinal absorption" evidence=IEA] [GO:0060058 "positive regulation of apoptotic process involved in mammary gland involution" evidence=IEA] [GO:0060558 "regulation of calcidiol 1-monooxygenase activity" evidence=IEA] [GO:0060745 "mammary gland branching involved in pregnancy" evidence=IEA] [GO:0070644 "vitamin D response element binding" evidence=IEA] [GO:1902098 "calcitriol binding" evidence=IEA] [GO:1902121 "lithocholic acid binding" evidence=IEA] InterPro:IPR000324 InterPro:IPR000536 InterPro:IPR001628 InterPro:IPR001723 InterPro:IPR008946 InterPro:IPR013088 Pfam:PF00104 Pfam:PF00105 PRINTS:PR00047 PRINTS:PR00350 PRINTS:PR00398 PROSITE:PS00031 PROSITE:PS51030 SMART:SM00399 SMART:SM00430 GO:GO:0005634 GO:GO:0043565 GO:GO:0003707 GO:GO:0008270 Gene3D:1.10.565.10 Gene3D:3.30.50.10 SUPFAM:SSF48508 GO:GO:0045944 GO:GO:0000122 GO:GO:0009887 GO:GO:0006366 GO:GO:0001501 GO:GO:0006816 GO:GO:0006874 GO:GO:0050892 GO:GO:0000902 GO:GO:0045618 GO:GO:0007595 GO:GO:0060058 GO:GO:0046697 GO:GO:0010839 EMBL:AAFC03056593 GO:GO:0010980 GO:GO:0060745 HOVERGEN:HBG108655 HOGENOM:HOG000220844 GO:GO:0070644 KO:K08539 GO:GO:0008434 eggNOG:NOG283526 RefSeq:NP_001161404.1 UniGene:Bt.61412 ProteinModelPortal:Q28037 SMR:Q28037 BindingDB:Q28037 ChEMBL:CHEMBL3452 PRIDE:Q28037 GeneID:533656 KEGG:bta:533656 CTD:7421 InParanoid:Q28037 NextBio:20876106 GO:GO:1902098 GO:GO:1902121 GO:GO:0038186 GO:GO:0060558 Uniprot:Q28037)

HSP 1 Score: 53.5286 bits (127), Expect = 3.785e-6
Identity = 18/49 (36.73%), Postives = 32/49 (65.31%), Query Frame = 0

Query:   27 NKNCVVTKHTRKHCQYCRFVKCLSVGMKSSWVMTEEDKKEKKEKAFIKK 75
            N +C +TK  R+HCQ CR  +C+ +GM   +++T+E+ + K+E    +K
Sbjct:   63 NGDCRITKDNRRHCQACRLKRCIDIGMMKEFILTDEEVQRKREMILKRK 111

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BLAST of EMLSAG00000012965 vs. GO
Match: - (symbol:RXRB "cDNA FLJ50538, highly similar to Retinoic acid receptor RXR-beta" species:9606 "Homo sapiens" [GO:0003700 "sequence-specific DNA binding transcription factor activity" evidence=IEA] [GO:0003707 "steroid hormone receptor activity" evidence=IEA] [GO:0005634 "nucleus" evidence=IEA] [GO:0006351 "transcription, DNA-templated" evidence=IEA] [GO:0008270 "zinc ion binding" evidence=IEA] [GO:0043565 "sequence-specific DNA binding" evidence=IEA] InterPro:IPR001628 InterPro:IPR008946 InterPro:IPR013088 Pfam:PF00105 PRINTS:PR00047 PROSITE:PS00031 PROSITE:PS51030 SMART:SM00399 GO:GO:0005634 eggNOG:NOG327099 OrthoDB:EOG72RMZ5 GO:GO:0043565 GO:GO:0003707 GO:GO:0008270 Gene3D:1.10.565.10 Gene3D:3.30.50.10 GO:GO:0003700 GO:GO:0006351 GO:GO:0043401 EMBL:AL645940 UniGene:Hs.388034 HGNC:HGNC:10478 ChiTaRS:RXRB EMBL:AK295759 ProteinModelPortal:B7Z3E4 SMR:B7Z3E4 STRING:9606.ENSP00000393286 PRIDE:B7Z3E4 Ensembl:ENST00000413614 UCSC:uc003ode.1 HOVERGEN:HBG105962 NextBio:35479218 ArrayExpress:B7Z3E4 Uniprot:B7Z3E4)

HSP 1 Score: 52.7582 bits (125), Expect = 3.978e-6
Identity = 22/51 (43.14%), Postives = 31/51 (60.78%), Query Frame = 0

Query:   18 EEISKSVDDNKNCVVTKHTRKHCQYCRFVKCLSVGMKSSWVMTEEDKKEKK 68
            ++++ S  DNK+C V K  R  CQYCR+ KCL+ GMK   V  E  + + K
Sbjct:  139 KDLTYSCRDNKDCTVDKRQRNRCQYCRYQKCLATGMKREAVQEERQRGKDK 189

[Close]

BLAST of EMLSAG00000012965 vs. GO
Match: - (symbol:RXRA "Uncharacterized protein" species:9913 "Bos taurus" [GO:0000122 "negative regulation of transcription from RNA polymerase II promoter" evidence=IEA] [GO:0000790 "nuclear chromatin" evidence=IEA] [GO:0001701 "in utero embryonic development" evidence=IEA] [GO:0001893 "maternal placenta development" evidence=IEA] [GO:0003707 "steroid hormone receptor activity" evidence=IEA] [GO:0004886 "9-cis retinoic acid receptor activity" evidence=IEA] [GO:0007566 "embryo implantation" evidence=IEA] [GO:0008270 "zinc ion binding" evidence=IEA] [GO:0019048 "modulation by virus of host morphology or physiology" evidence=IEA] [GO:0019899 "enzyme binding" evidence=IEA] [GO:0031490 "chromatin DNA binding" evidence=IEA] [GO:0032526 "response to retinoic acid" evidence=IEA] [GO:0035357 "peroxisome proliferator activated receptor signaling pathway" evidence=IEA] [GO:0042809 "vitamin D receptor binding" evidence=IEA] [GO:0043565 "sequence-specific DNA binding" evidence=IEA] [GO:0044323 "retinoic acid-responsive element binding" evidence=IEA] [GO:0045944 "positive regulation of transcription from RNA polymerase II promoter" evidence=IEA] [GO:0046982 "protein heterodimerization activity" evidence=IEA] [GO:0055010 "ventricular cardiac muscle tissue morphogenesis" evidence=IEA] [GO:0055012 "ventricular cardiac muscle cell differentiation" evidence=IEA] [GO:0060038 "cardiac muscle cell proliferation" evidence=IEA] [GO:0060528 "secretory columnal luminar epithelial cell differentiation involved in prostate glandular acinus development" evidence=IEA] [GO:0060687 "regulation of branching involved in prostate gland morphogenesis" evidence=IEA] [GO:0070644 "vitamin D response element binding" evidence=IEA] InterPro:IPR000003 InterPro:IPR000536 InterPro:IPR001628 InterPro:IPR001723 InterPro:IPR008946 InterPro:IPR013088 Pfam:PF00104 Pfam:PF00105 PRINTS:PR00047 PRINTS:PR00398 PRINTS:PR00545 PROSITE:PS00031 PROSITE:PS51030 SMART:SM00399 SMART:SM00430 OrthoDB:EOG72RMZ5 GO:GO:0043565 GO:GO:0003707 GO:GO:0008270 Gene3D:1.10.565.10 Gene3D:3.30.50.10 SUPFAM:SSF48508 GO:GO:0001701 GO:GO:0007566 GO:GO:0045944 GO:GO:0000122 GO:GO:0000790 GO:GO:0006366 GO:GO:0032526 GO:GO:0001893 GO:GO:0031490 GO:GO:0060038 GO:GO:0055010 GO:GO:0060687 GO:GO:0019048 TreeFam:TF352097 GO:GO:0044323 GO:GO:0060528 GeneTree:ENSGT00740000115010 GO:GO:0035357 GO:GO:0055012 GO:GO:0004886 InterPro:IPR021780 Pfam:PF11825 OMA:KHFLPLD GO:GO:0070644 EMBL:DAAA02032421 EMBL:DAAA02032422 EMBL:DAAA02032423 Ensembl:ENSBTAT00000023729 Uniprot:F1MX52)

HSP 1 Score: 53.5286 bits (127), Expect = 4.168e-6
Identity = 20/54 (37.04%), Postives = 37/54 (68.52%), Query Frame = 0

Query:   18 EEISKSVDDNKNCVVTKHTRKHCQYCRFVKCLSVGMKSSWVMTEEDKKEKKEKA 71
            ++++ +  DNK+C++ K  R  CQYCR+ KCL++GMK   V  +E+++  K++ 
Sbjct:  177 KDLTYTCRDNKDCLIDKRQRNRCQYCRYQKCLAMGMKREAV--QEERQRGKDRG 228

[Close]

BLAST of EMLSAG00000012965 vs. GO
Match: - (symbol:RXRG "Uncharacterized protein" species:9615 "Canis lupus familiaris" [GO:0003707 "steroid hormone receptor activity" evidence=IEA] [GO:0004886 "9-cis retinoic acid receptor activity" evidence=IEA] [GO:0005634 "nucleus" evidence=IEA] [GO:0008270 "zinc ion binding" evidence=IEA] [GO:0043565 "sequence-specific DNA binding" evidence=IEA] [GO:0045944 "positive regulation of transcription from RNA polymerase II promoter" evidence=IEA] InterPro:IPR000003 InterPro:IPR000536 InterPro:IPR001628 InterPro:IPR001723 InterPro:IPR008946 InterPro:IPR013088 Pfam:PF00104 Pfam:PF00105 PRINTS:PR00047 PRINTS:PR00398 PRINTS:PR00545 PROSITE:PS00031 PROSITE:PS51030 SMART:SM00399 SMART:SM00430 GO:GO:0005634 OrthoDB:EOG72RMZ5 GO:GO:0043565 GO:GO:0003707 GO:GO:0008270 Gene3D:1.10.565.10 Gene3D:3.30.50.10 SUPFAM:SSF48508 GO:GO:0045944 GO:GO:0006366 TreeFam:TF352097 GeneTree:ENSGT00740000115010 GO:GO:0004886 InterPro:IPR021780 Pfam:PF11825 CTD:6258 KO:K08526 OMA:CASGGHE EMBL:AAEX03018391 RefSeq:XP_536146.2 ProteinModelPortal:E2RD69 Ensembl:ENSCAFT00000021179 GeneID:478989 KEGG:cfa:478989 NextBio:20854245 Uniprot:E2RD69)

HSP 1 Score: 53.5286 bits (127), Expect = 4.313e-6
Identity = 21/46 (45.65%), Postives = 32/46 (69.57%), Query Frame = 0

Query:   26 DNKNCVVTKHTRKHCQYCRFVKCLSVGMKSSWVMTEEDKKEKKEKA 71
            DNK+C++ K  R  CQYCR+ KCL +GMK   V  +E+++  +E+A
Sbjct:  177 DNKDCLIDKRQRNRCQYCRYQKCLVMGMKREAV--QEERQRSRERA 220

[Close]

BLAST of EMLSAG00000012965 vs. GO
Match: - (symbol:VDR "Vitamin D3 receptor" species:9031 "Gallus gallus" [GO:0000122 "negative regulation of transcription from RNA polymerase II promoter" evidence=IEA] [GO:0000902 "cell morphogenesis" evidence=IEA] [GO:0001501 "skeletal system development" evidence=IEA] [GO:0003707 "steroid hormone receptor activity" evidence=IEA] [GO:0005634 "nucleus" evidence=IEA] [GO:0006816 "calcium ion transport" evidence=IEA] [GO:0006874 "cellular calcium ion homeostasis" evidence=IEA] [GO:0007595 "lactation" evidence=IEA] [GO:0008270 "zinc ion binding" evidence=IEA] [GO:0008434 "calcitriol receptor activity" evidence=IEA] [GO:0009887 "organ morphogenesis" evidence=IEA] [GO:0010839 "negative regulation of keratinocyte proliferation" evidence=IEA] [GO:0010980 "positive regulation of vitamin D 24-hydroxylase activity" evidence=IEA] [GO:0038186 "lithocholic acid receptor activity" evidence=IEA] [GO:0043565 "sequence-specific DNA binding" evidence=IEA] [GO:0045618 "positive regulation of keratinocyte differentiation" evidence=IEA] [GO:0045944 "positive regulation of transcription from RNA polymerase II promoter" evidence=IEA] [GO:0046697 "decidualization" evidence=IEA] [GO:0046965 "retinoid X receptor binding" evidence=IEA] [GO:0050892 "intestinal absorption" evidence=IEA] [GO:0060058 "positive regulation of apoptotic process involved in mammary gland involution" evidence=IEA] [GO:0060558 "regulation of calcidiol 1-monooxygenase activity" evidence=IEA] [GO:0060745 "mammary gland branching involved in pregnancy" evidence=IEA] [GO:0070644 "vitamin D response element binding" evidence=IEA] [GO:1902098 "calcitriol binding" evidence=IEA] [GO:1902121 "lithocholic acid binding" evidence=IEA] InterPro:IPR000324 InterPro:IPR000536 InterPro:IPR001628 InterPro:IPR001723 InterPro:IPR008946 InterPro:IPR013088 Pfam:PF00104 Pfam:PF00105 PRINTS:PR00350 PRINTS:PR00398 PROSITE:PS51030 SMART:SM00399 SMART:SM00430 GO:GO:0005634 GO:GO:0043565 GO:GO:0003707 GO:GO:0008270 Gene3D:1.10.565.10 Gene3D:3.30.50.10 SUPFAM:SSF48508 GO:GO:0006357 GO:GO:0006366 GO:GO:0070561 GeneTree:ENSGT00720000108423 GO:GO:0008434 Ensembl:ENSGALT00000046121 Uniprot:R4GMF6)

HSP 1 Score: 53.1434 bits (126), Expect = 4.329e-6
Identity = 18/49 (36.73%), Postives = 32/49 (65.31%), Query Frame = 0

Query:   27 NKNCVVTKHTRKHCQYCRFVKCLSVGMKSSWVMTEEDKKEKKEKAFIKK 75
            N +C +TK  R+HCQ CR  +C+ +GM   +++T+E+ + K+E    +K
Sbjct:   18 NGDCKITKDNRRHCQACRLKRCVDIGMMKEFILTDEEVQRKREMILKRK 66

[Close]

BLAST of EMLSAG00000012965 vs. GO
Match: - (symbol:RXRB "Retinoic acid receptor RXR-beta" species:9615 "Canis lupus familiaris" [GO:0001701 "in utero embryonic development" evidence=IEA] [GO:0001893 "maternal placenta development" evidence=IEA] [GO:0003707 "steroid hormone receptor activity" evidence=IEA] [GO:0004886 "9-cis retinoic acid receptor activity" evidence=IEA] [GO:0005634 "nucleus" evidence=IEA] [GO:0008270 "zinc ion binding" evidence=IEA] [GO:0043565 "sequence-specific DNA binding" evidence=IEA] [GO:0044212 "transcription regulatory region DNA binding" evidence=IEA] [GO:0045944 "positive regulation of transcription from RNA polymerase II promoter" evidence=IEA] [GO:0055012 "ventricular cardiac muscle cell differentiation" evidence=IEA] [GO:0060038 "cardiac muscle cell proliferation" evidence=IEA] [GO:0071300 "cellular response to retinoic acid" evidence=IEA] InterPro:IPR000003 InterPro:IPR000536 InterPro:IPR001628 InterPro:IPR001723 InterPro:IPR008946 InterPro:IPR013088 Pfam:PF00104 Pfam:PF00105 PRINTS:PR00047 PRINTS:PR00398 PRINTS:PR00545 PROSITE:PS00031 PROSITE:PS51030 SMART:SM00399 SMART:SM00430 GO:GO:0005634 OrthoDB:EOG72RMZ5 GO:GO:0043565 GO:GO:0003707 GO:GO:0008270 Gene3D:1.10.565.10 Gene3D:3.30.50.10 SUPFAM:SSF48508 GO:GO:0071300 GO:GO:0001701 GO:GO:0045944 GO:GO:0044212 GO:GO:0006366 GO:GO:0001893 GO:GO:0060038 TreeFam:TF352097 GeneTree:ENSGT00740000115010 GO:GO:0055012 GO:GO:0004886 KO:K08525 OMA:FLPERHA EMBL:AAEX03008237 RefSeq:XP_005627254.1 Ensembl:ENSCAFT00000001418 GeneID:481735 NextBio:20856477 Uniprot:F1PUF6)

HSP 1 Score: 53.5286 bits (127), Expect = 4.375e-6
Identity = 22/51 (43.14%), Postives = 31/51 (60.78%), Query Frame = 0

Query:   18 EEISKSVDDNKNCVVTKHTRKHCQYCRFVKCLSVGMKSSWVMTEEDKKEKK 68
            ++++ S  DNK+C V K  R  CQYCR+ KCL+ GMK   V  E  + + K
Sbjct:  234 KDLTYSCRDNKDCTVDKRQRNRCQYCRYQKCLATGMKREAVQEERQRGKDK 284

[Close]

BLAST of EMLSAG00000012965 vs. GO
Match: - (symbol:VDR "Vitamin D3 receptor" species:9606 "Homo sapiens" [GO:0001501 "skeletal system development" evidence=IEA] [GO:0003707 "steroid hormone receptor activity" evidence=IEA] [GO:0005634 "nucleus" evidence=IDA] [GO:0006816 "calcium ion transport" evidence=IEA] [GO:0006874 "cellular calcium ion homeostasis" evidence=IEA] [GO:0007595 "lactation" evidence=IEA] [GO:0008270 "zinc ion binding" evidence=IEA] [GO:0008434 "calcitriol receptor activity" evidence=IEA] [GO:0009887 "organ morphogenesis" evidence=IEA] [GO:0043565 "sequence-specific DNA binding" evidence=IEA] [GO:0050892 "intestinal absorption" evidence=IEA] [GO:0060058 "positive regulation of apoptotic process involved in mammary gland involution" evidence=IEA] [GO:0060558 "regulation of calcidiol 1-monooxygenase activity" evidence=IEA] [GO:0060745 "mammary gland branching involved in pregnancy" evidence=IEA] [GO:0005730 "nucleolus" evidence=IDA] InterPro:IPR000324 InterPro:IPR001628 InterPro:IPR008946 InterPro:IPR013088 Pfam:PF00105 PRINTS:PR00047 PRINTS:PR00350 PROSITE:PS00031 PROSITE:PS51030 SMART:SM00399 GO:GO:0005634 GO:GO:0043565 GO:GO:0003707 GO:GO:0008270 Gene3D:1.10.565.10 Gene3D:3.30.50.10 SUPFAM:SSF48508 GO:GO:0006357 GO:GO:0009887 GO:GO:0006366 GO:GO:0001501 GO:GO:0006816 GO:GO:0006874 GO:GO:0050892 GO:GO:0007595 GO:GO:0060058 GO:GO:0043401 GO:GO:0070561 GO:GO:0060745 EMBL:AC004466 GO:GO:0008434 GO:GO:0060558 EMBL:AC121338 HGNC:HGNC:12679 ChiTaRS:VDR ProteinModelPortal:F8VRJ4 SMR:F8VRJ4 Ensembl:ENST00000546653 NextBio:35511415 ArrayExpress:F8VRJ4 Bgee:F8VRJ4 Uniprot:F8VRJ4)

HSP 1 Score: 52.373 bits (124), Expect = 4.417e-6
Identity = 18/49 (36.73%), Postives = 32/49 (65.31%), Query Frame = 0

Query:   27 NKNCVVTKHTRKHCQYCRFVKCLSVGMKSSWVMTEEDKKEKKEKAFIKK 75
            N +C +TK  R+HCQ CR  +C+ +GM   +++T+E+ + K+E    +K
Sbjct:   63 NGDCRITKDNRRHCQACRLKRCVDIGMMKEFILTDEEVQRKREMILKRK 111

[Close]

BLAST of EMLSAG00000012965 vs. GO
Match: - (symbol:RXRG "Retinoic acid receptor RXR-gamma" species:9823 "Sus scrofa" [GO:0003707 "steroid hormone receptor activity" evidence=IEA] [GO:0004886 "9-cis retinoic acid receptor activity" evidence=IEA] [GO:0005634 "nucleus" evidence=IEA] [GO:0008270 "zinc ion binding" evidence=IEA] [GO:0043565 "sequence-specific DNA binding" evidence=IEA] [GO:0045944 "positive regulation of transcription from RNA polymerase II promoter" evidence=IEA] InterPro:IPR000003 InterPro:IPR000536 InterPro:IPR001628 InterPro:IPR001723 InterPro:IPR008946 InterPro:IPR013088 Pfam:PF00104 Pfam:PF00105 PRINTS:PR00047 PRINTS:PR00398 PRINTS:PR00545 PROSITE:PS00031 PROSITE:PS51030 SMART:SM00399 SMART:SM00430 GO:GO:0005634 eggNOG:NOG327099 OrthoDB:EOG72RMZ5 GO:GO:0043565 GO:GO:0003707 GO:GO:0008270 Gene3D:1.10.565.10 Gene3D:3.30.50.10 SUPFAM:SSF48508 GO:GO:0045944 GO:GO:0006366 HOVERGEN:HBG005606 TreeFam:TF352097 GeneTree:ENSGT00740000115010 HOGENOM:HOG000260821 GO:GO:0004886 InterPro:IPR021780 Pfam:PF11825 CTD:6258 KO:K08526 OMA:CASGGHE EMBL:DQ866834 EMBL:AY429474 RefSeq:NP_001123685.1 UniGene:Ssc.19608 ProteinModelPortal:Q0GFF6 SMR:Q0GFF6 STRING:9823.ENSSSCP00000006747 Ensembl:ENSSSCT00000006936 GeneID:445465 KEGG:ssc:445465 ArrayExpress:Q0GFF6 Uniprot:Q0GFF6)

HSP 1 Score: 53.5286 bits (127), Expect = 4.427e-6
Identity = 21/46 (45.65%), Postives = 32/46 (69.57%), Query Frame = 0

Query:   26 DNKNCVVTKHTRKHCQYCRFVKCLSVGMKSSWVMTEEDKKEKKEKA 71
            DNK+C++ K  R  CQYCR+ KCL +GMK   V  +E+++  +E+A
Sbjct:  177 DNKDCLIDKRQRNRCQYCRYQKCLVMGMKREAV--QEERQRSRERA 220

[Close]

BLAST of EMLSAG00000012965 vs. GO
Match: - (symbol:RXRG "Retinoic acid receptor RXR-gamma" species:9606 "Homo sapiens" [GO:0003707 "steroid hormone receptor activity" evidence=IEA] [GO:0004886 "9-cis retinoic acid receptor activity" evidence=IEA] [GO:0005515 "protein binding" evidence=IPI] [GO:0005654 "nucleoplasm" evidence=TAS] [GO:0006367 "transcription initiation from RNA polymerase II promoter" evidence=TAS] [GO:0007422 "peripheral nervous system development" evidence=IEA] [GO:0007507 "heart development" evidence=IEA] [GO:0007519 "skeletal muscle tissue development" evidence=IEA] [GO:0008270 "zinc ion binding" evidence=IEA] [GO:0010467 "gene expression" evidence=TAS] [GO:0030182 "neuron differentiation" evidence=IEA] [GO:0031641 "regulation of myelination" evidence=IEA] [GO:0032526 "response to retinoic acid" evidence=IEA] [GO:0043565 "sequence-specific DNA binding" evidence=IEA] [GO:0045944 "positive regulation of transcription from RNA polymerase II promoter" evidence=IEA] Reactome:REACT_71 InterPro:IPR000003 InterPro:IPR000536 InterPro:IPR001628 InterPro:IPR001723 InterPro:IPR008946 InterPro:IPR013088 Pfam:PF00104 Pfam:PF00105 PRINTS:PR00047 PRINTS:PR00398 PRINTS:PR00545 PROSITE:PS00031 PROSITE:PS51030 SMART:SM00399 SMART:SM00430 GO:GO:0005654 GO:GO:0007507 GO:GO:0030182 eggNOG:NOG327099 OrthoDB:EOG72RMZ5 GO:GO:0043565 GO:GO:0003707 GO:GO:0008270 Gene3D:1.10.565.10 Gene3D:3.30.50.10 SUPFAM:SSF48508 GO:GO:0045944 GO:GO:0007422 EMBL:CH471067 GO:GO:0032526 DrugBank:DB00755 DrugBank:DB00459 GO:GO:0006367 GO:GO:0031641 GO:GO:0007519 HOVERGEN:HBG005606 TreeFam:TF352097 EMBL:AL160058 DrugBank:DB00523 DrugBank:DB00926 DrugBank:DB00210 HOGENOM:HOG000260821 GO:GO:0004886 InterPro:IPR021780 Pfam:PF11825 CTD:6258 KO:K08526 OMA:CASGGHE EMBL:U38480 EMBL:CR456705 EMBL:BC012063 RefSeq:NP_001243500.1 RefSeq:NP_008848.1 UniGene:Hs.26550 PDB:2GL8 PDBsum:2GL8 ProteinModelPortal:P48443 SMR:P48443 BioGrid:112170 DIP:DIP-56220N IntAct:P48443 MINT:MINT-1378806 STRING:9606.ENSP00000352900 BindingDB:P48443 ChEMBL:CHEMBL2363070 GuidetoPHARMACOLOGY:612 PhosphoSite:P48443 DMDM:1350913 PaxDb:P48443 PRIDE:P48443 DNASU:6258 Ensembl:ENST00000359842 GeneID:6258 KEGG:hsa:6258 UCSC:uc001gda.3 GeneCards:GC01M165370 HGNC:HGNC:10479 HPA:CAB002615 MIM:180247 neXtProt:NX_P48443 PharmGKB:PA34892 InParanoid:P48443 PhylomeDB:P48443 SignaLink:P48443 EvolutionaryTrace:P48443 GeneWiki:Retinoid_X_receptor_gamma GenomeRNAi:6258 NextBio:24303 PRO:PR:P48443 ArrayExpress:P48443 Bgee:P48443 CleanEx:HS_RXRG Genevestigator:P48443 Uniprot:P48443)

HSP 1 Score: 53.5286 bits (127), Expect = 4.505e-6
Identity = 21/46 (45.65%), Postives = 32/46 (69.57%), Query Frame = 0

Query:   26 DNKNCVVTKHTRKHCQYCRFVKCLSVGMKSSWVMTEEDKKEKKEKA 71
            DNK+C++ K  R  CQYCR+ KCL +GMK   V  +E+++  +E+A
Sbjct:  177 DNKDCLIDKRQRNRCQYCRYQKCLVMGMKREAV--QEERQRSRERA 220

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BLAST of EMLSAG00000012965 vs. C. finmarchicus
Match: gi|592876291|gb|GAXK01081286.1| (TSA: Calanus finmarchicus comp1041760_c0_seq1 transcribed RNA sequence)

HSP 1 Score: 108.997 bits (271), Expect = 6.289e-24
Identity = 66/213 (30.99%), Postives = 113/213 (53.05%), Query Frame = 0

Query:  421 MINCSYSNKTFPQDVCLEGYLVCMRRIIQLSSMLDFFTCFSMEDQKALLLTNTDMIVNIRTARFF------------QHGVHFKKHIFFVNNTDDDPKYGRMDTFQIFQSPWACSDEDEKKYNDLMKKIFDLQLDEISTVLISMMSLFSSTNAKIHDELRANKTQEFFTNLMKKYIIHHVGKDAACQLLPKYIFMIAHLEEMAQVMVXKRLNI 621
            M + ++S  T   ++   GY   +++I   +  +D F+   +ED+K LLL N D + NI++A FF               V   KH+    N    P    M   Q F++PWA + E EKKY  L+ +  +L+LDE +  L+ +++LF++  A +  + +  + QE F  L+ +++I   G++AA +  PKYI M++HL EMA +M  + L +
Sbjct: 1280 MFDKAFSFLTMDYELIFWGYTFAIKKITWFAQAIDEFSVCEIEDKKTLLLQNLDPMFNIKSAMFFLSQSENLFEQLRNFCVFDTKHLISAENALTAPP---MKWNQFFRTPWANNLEHEKKYEILLAQAKELELDERAGCLLQVVALFANDGAVLKTKEQVERLQENFCILLFRFLIDRDGEEAAAEKFPKYISMLSHLREMADIMRNQTLKL 1909

HSP 2 Score: 45.8246 bits (107), Expect = 4.309e-4
Identity = 17/25 (68.00%), Postives = 21/25 (84.00%), Query Frame = 0

Query:   29 NCVVTKHTRKHCQYCRFVKCLSVGM 53
            NC++T +TRK CQYCRF KC +VGM
Sbjct:  458 NCMITVNTRKKCQYCRFKKCKAVGM 532

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BLAST of EMLSAG00000012965 vs. C. finmarchicus
Match: gi|592835469|gb|GAXK01122075.1| (TSA: Calanus finmarchicus comp107343_c0_seq1 transcribed RNA sequence)

HSP 1 Score: 108.227 bits (269), Expect = 1.459e-23
Identity = 63/225 (28.00%), Postives = 104/225 (46.22%), Query Frame = 0

Query:  411 IPLRSETMAXMINCSYSNKTFPQDVCLEGYLVCMRRIIQLSSMLDFFTCFSMEDQKALLLTNTDMIVNIRTARFFQHGVHFKKHIFFVNNTDDDPKYG------------RMDTFQIFQSPWACSDEDEKKYNDLMKKIFDLQLDEISTVLISMMSLFSSTNAKIHDELRANKT----QEFFTNLMKKYIIHHVGKDAACQLLPKYIFMIAHLEEMAQVMVXKRL 619
            +P+        ++CS S     Q   +  Y  C++RI++ ++ L  F     +D + LL++NT  I+NIR AR+F      K  I       D  K              ++    +F SPW C    E +Y  L+ +I  L LD    VL+S+M LF S      ++L A  T       F+ L+++Y++  +GK+   +   KY   +  L EMA++++ KRL
Sbjct:  211 VPMEVSHGRSFLDCSVSGNHISQITIMHAYQTCIKRIVRFANSLQDFVELPPDDMQKLLVSNTVSIINIRIARWFHPKTDLKTQISLCGTGQDLFKDAMQEGKLSEGTPLKVGYDDVFSSPWCCDSSHEDRYETLISQIHQLDLDSTVVVLLSVMCLFDSEQV---EDLSAKSTIISHGRKFSLLLQRYLVESIGKEKTAECFVKYREALQKLREMAEILINKRL 876

HSP 2 Score: 56.225 bits (134), Expect = 2.449e-7
Identity = 21/32 (65.62%), Postives = 26/32 (81.25%), Query Frame = 0

Query:   29 NCVVTKHTRKHCQYCRFVKCLSVGMKSSWVMT 60
            NC + K TRK CQ+CRF KC +VGMK+SWV+T
Sbjct: 2059 NCKINKDTRKRCQFCRFEKCKAVGMKTSWVLT 2154

[Close]

BLAST of EMLSAG00000012965 vs. C. finmarchicus
Match: gi|592782594|gb|GAXK01171974.1| (TSA: Calanus finmarchicus comp62776_c0_seq1 transcribed RNA sequence)

HSP 1 Score: 97.8265 bits (242), Expect = 3.402e-20
Identity = 65/246 (26.42%), Postives = 111/246 (45.12%), Query Frame = 0

Query:  389 FSDYECNLISNIMIXXXXXXKLIPLRSETMAXMINCSYSNKTFPQDVCLEGYLVCMRRIIQLSSMLDFFTCFSMEDQKALLLTNTDMIVNIRTARFFQHGVHFKKHIFFVNNTDDDPKYGRMDT------------FQIFQSPWACSD-EDEKKYNDLMKKIFDLQLDEISTVLISMMSLFSSTNAKIHDELRANKTQEFFTNLMKKYIIHHVGKDAACQLLPKYIFMIAHLEEMAQVMVXKRLNI 621
            F+  E N +  ++   +E  + +    E +  MI CS           + GY + + RI +++  LD FT     DQ  LL  N D++VN+R A FF         +      DD      M T            ++ F S  A ++   E +YN L  K+ DL  D+I+T+LI+ + LFS     + D  R  +TQ+ +  ++++YI     +  AC +L + +  +  L EMA +   + +N+
Sbjct:  607 FTTAEYNQLEQLVKDHDERYRSVNFGEELIKEMIMCSMFGIPVSTSAAINGYRLSVERITRIAHNLDCFTDLPKNDQNNLLKENADLLVNLRGAIFFDSKKKGVDQVLISMGIDDLQTIKTMFTPLLKENSMKHIDYKTFNSIQAVANPATESRYNFLQTKVADLITDDITTILITYIVLFSVDFCPLLDRRRVERTQDVYIRMLERYIYSKTSRKIACSVLARTLNAVTCLREMADIKKSRAINL 1344

HSP 2 Score: 53.1434 bits (126), Expect = 2.516e-6
Identity = 17/33 (51.52%), Postives = 28/33 (84.85%), Query Frame = 0

Query:   28 KNCVVTKHTRKHCQYCRFVKCLSVGMKSSWVMT 60
            KNC +   TRK+CQ+CR+++C++VGMK +WV++
Sbjct: 2587 KNCEINLKTRKNCQFCRYMRCIAVGMKPTWVLS 2685

[Close]

BLAST of EMLSAG00000012965 vs. C. finmarchicus
Match: gi|592850976|gb|GAXK01106568.1| (TSA: Calanus finmarchicus comp119035_c1_seq5 transcribed RNA sequence)

HSP 1 Score: 87.0409 bits (214), Expect = 6.464e-17
Identity = 60/247 (24.29%), Postives = 112/247 (45.34%), Query Frame = 0

Query:  389 FSDYECNLISNIMIXXXXXXKLIPLRSETMAXMINCSYSNKTFPQDVCLEGYLVCMRRIIQLSSMLDFFTCFSMEDQKALLLTNTDMIVNIRTARFFQHGVHFKKHIFFVNNTDD-------------DPKYGRMDTFQIFQSPWACSDED--EKKYNDLMKKIFDLQLDEISTVLISMMSLFSSTNAKIHDELRANKTQEFFTNLMKKYIIHHVGKDAACQLLPKYIFMIAHLEEMAQVMVXKRLN 620
            F++ E   +  ++ S +E  + +    E +  MI CS           + GY + + RI ++++ +D F    + DQ +LL  N D++V++R A FF         +      DD             + K   +D ++IF S      ++  EK+YN L  K+ +   D+I T+L++ + LFS     + D  R  + QE F  ++++Y+    G+  AC  L   +  +  + EMA +   + +N
Sbjct:   54 FTEEEYEQLKGLVRSHDERYRSVNFGEELIKEMIMCSMFGIPMSTSAAISGYRLTVERITRIANNMDCFNDLPLMDQSSLLKENADLLVSLRGAIFFDSKKKGVNQVLISMGIDDLETIKTMFAPLMKESKMRHID-YKIFNSIQKVESDNSVEKRYNFLQGKVAESISDDIITILMTYIILFSVDFCTLQDRRRVEQLQEQFIRMLERYVYSKTGRKDACNTLANSLNAVTCIREMADIKKSRAIN 791

HSP 2 Score: 52.7582 bits (125), Expect = 3.075e-6
Identity = 19/33 (57.58%), Postives = 27/33 (81.82%), Query Frame = 0

Query:   28 KNCVVTKHTRKHCQYCRFVKCLSVGMKSSWVMT 60
            K+C +   TRK+CQ+CR+ +CLSVGMK SWV++
Sbjct: 1743 KDCQINLKTRKNCQFCRYERCLSVGMKPSWVLS 1841

[Close]

BLAST of EMLSAG00000012965 vs. C. finmarchicus
Match: gi|592850977|gb|GAXK01106567.1| (TSA: Calanus finmarchicus comp119035_c1_seq4 transcribed RNA sequence)

HSP 1 Score: 87.0409 bits (214), Expect = 7.289e-17
Identity = 60/247 (24.29%), Postives = 112/247 (45.34%), Query Frame = 0

Query:  389 FSDYECNLISNIMIXXXXXXKLIPLRSETMAXMINCSYSNKTFPQDVCLEGYLVCMRRIIQLSSMLDFFTCFSMEDQKALLLTNTDMIVNIRTARFFQHGVHFKKHIFFVNNTDD-------------DPKYGRMDTFQIFQSPWACSDED--EKKYNDLMKKIFDLQLDEISTVLISMMSLFSSTNAKIHDELRANKTQEFFTNLMKKYIIHHVGKDAACQLLPKYIFMIAHLEEMAQVMVXKRLN 620
            F++ E   +  ++ S +E  + +    E +  MI CS           + GY + + RI ++++ +D F    + DQ +LL  N D++V++R A FF         +      DD             + K   +D ++IF S      ++  EK+YN L  K+ +   D+I T+L++ + LFS     + D  R  + QE F  ++++Y+    G+  AC  L   +  +  + EMA +   + +N
Sbjct:  536 FTEEEYEQLKGLVRSHDERYRSVNFGEELIKEMIMCSMFGIPMSTSAAISGYRLTVERITRIANNMDCFNDLPLMDQSSLLKENADLLVSLRGAIFFDSKKKGVNQVLISMGIDDLETIKTMFAPLMKESKMRHID-YKIFNSIQKVESDNSVEKRYNFLQGKVAESISDDIITILMTYIILFSVDFCTLQDRRRVEQLQEQFIRMLERYVYSKTGRKDACNTLANSLNAVTCIREMADIKKSRAIN 1273

HSP 2 Score: 52.7582 bits (125), Expect = 3.247e-6
Identity = 19/33 (57.58%), Postives = 27/33 (81.82%), Query Frame = 0

Query:   28 KNCVVTKHTRKHCQYCRFVKCLSVGMKSSWVMT 60
            K+C +   TRK+CQ+CR+ +CLSVGMK SWV++
Sbjct: 2225 KDCQINLKTRKNCQFCRYERCLSVGMKPSWVLS 2323

[Close]

BLAST of EMLSAG00000012965 vs. C. finmarchicus
Match: gi|592850985|gb|GAXK01106559.1| (TSA: Calanus finmarchicus comp119035_c0_seq1 transcribed RNA sequence)

HSP 1 Score: 87.0409 bits (214), Expect = 7.429e-17
Identity = 60/247 (24.29%), Postives = 112/247 (45.34%), Query Frame = 0

Query:  389 FSDYECNLISNIMIXXXXXXKLIPLRSETMAXMINCSYSNKTFPQDVCLEGYLVCMRRIIQLSSMLDFFTCFSMEDQKALLLTNTDMIVNIRTARFFQHGVHFKKHIFFVNNTDD-------------DPKYGRMDTFQIFQSPWACSDED--EKKYNDLMKKIFDLQLDEISTVLISMMSLFSSTNAKIHDELRANKTQEFFTNLMKKYIIHHVGKDAACQLLPKYIFMIAHLEEMAQVMVXKRLN 620
            F++ E   +  ++ S +E  + +    E +  MI CS           + GY + + RI ++++ +D F    + DQ +LL  N D++V++R A FF         +      DD             + K   +D ++IF S      ++  EK+YN L  K+ +   D+I T+L++ + LFS     + D  R  + QE F  ++++Y+    G+  AC  L   +  +  + EMA +   + +N
Sbjct: 1608 FTEEEYEQLKGLVRSHDERYRSVNFGEELIKEMIMCSMFGIPMSTSAAISGYRLTVERITRIANNMDCFNDLPLMDQSSLLKENADLLVSLRGAIFFDSKKKGVNQVLISMGIDDLETIKTMFAPLMKESKMRHID-YKIFNSIQKVESDNSVEKRYNFLQGKVAESISDDIITILMTYIILFSVDFCTLQDRRRVEQLQEQFIRMLERYVYSKTGRKDACNTLANSLNAVTCIREMADIKKSRAIN 2345

HSP 2 Score: 52.7582 bits (125), Expect = 3.276e-6
Identity = 19/33 (57.58%), Postives = 27/33 (81.82%), Query Frame = 0

Query:   28 KNCVVTKHTRKHCQYCRFVKCLSVGMKSSWVMT 60
            K+C +   TRK+CQ+CR+ +CLSVGMK SWV++
Sbjct:  558 KDCQINLKTRKNCQFCRYERCLSVGMKPSWVLS 656

[Close]

BLAST of EMLSAG00000012965 vs. C. finmarchicus
Match: gi|592850978|gb|GAXK01106566.1| (TSA: Calanus finmarchicus comp119035_c1_seq3 transcribed RNA sequence)

HSP 1 Score: 87.0409 bits (214), Expect = 7.449e-17
Identity = 60/247 (24.29%), Postives = 112/247 (45.34%), Query Frame = 0

Query:  389 FSDYECNLISNIMIXXXXXXKLIPLRSETMAXMINCSYSNKTFPQDVCLEGYLVCMRRIIQLSSMLDFFTCFSMEDQKALLLTNTDMIVNIRTARFFQHGVHFKKHIFFVNNTDD-------------DPKYGRMDTFQIFQSPWACSDED--EKKYNDLMKKIFDLQLDEISTVLISMMSLFSSTNAKIHDELRANKTQEFFTNLMKKYIIHHVGKDAACQLLPKYIFMIAHLEEMAQVMVXKRLN 620
            F++ E   +  ++ S +E  + +    E +  MI CS           + GY + + RI ++++ +D F    + DQ +LL  N D++V++R A FF         +      DD             + K   +D ++IF S      ++  EK+YN L  K+ +   D+I T+L++ + LFS     + D  R  + QE F  ++++Y+    G+  AC  L   +  +  + EMA +   + +N
Sbjct:  655 FTEEEYEQLKGLVRSHDERYRSVNFGEELIKEMIMCSMFGIPMSTSAAISGYRLTVERITRIANNMDCFNDLPLMDQSSLLKENADLLVSLRGAIFFDSKKKGVNQVLISMGIDDLETIKTMFAPLMKESKMRHID-YKIFNSIQKVESDNSVEKRYNFLQGKVAESISDDIITILMTYIILFSVDFCTLQDRRRVEQLQEQFIRMLERYVYSKTGRKDACNTLANSLNAVTCIREMADIKKSRAIN 1392

HSP 2 Score: 52.7582 bits (125), Expect = 3.280e-6
Identity = 19/33 (57.58%), Postives = 27/33 (81.82%), Query Frame = 0

Query:   28 KNCVVTKHTRKHCQYCRFVKCLSVGMKSSWVMT 60
            K+C +   TRK+CQ+CR+ +CLSVGMK SWV++
Sbjct: 2344 KDCQINLKTRKNCQFCRYERCLSVGMKPSWVLS 2442

[Close]

BLAST of EMLSAG00000012965 vs. C. finmarchicus
Match: gi|592850979|gb|GAXK01106565.1| (TSA: Calanus finmarchicus comp119035_c1_seq2 transcribed RNA sequence)

HSP 1 Score: 87.0409 bits (214), Expect = 7.611e-17
Identity = 60/247 (24.29%), Postives = 112/247 (45.34%), Query Frame = 0

Query:  389 FSDYECNLISNIMIXXXXXXKLIPLRSETMAXMINCSYSNKTFPQDVCLEGYLVCMRRIIQLSSMLDFFTCFSMEDQKALLLTNTDMIVNIRTARFFQHGVHFKKHIFFVNNTDD-------------DPKYGRMDTFQIFQSPWACSDED--EKKYNDLMKKIFDLQLDEISTVLISMMSLFSSTNAKIHDELRANKTQEFFTNLMKKYIIHHVGKDAACQLLPKYIFMIAHLEEMAQVMVXKRLN 620
            F++ E   +  ++ S +E  + +    E +  MI CS           + GY + + RI ++++ +D F    + DQ +LL  N D++V++R A FF         +      DD             + K   +D ++IF S      ++  EK+YN L  K+ +   D+I T+L++ + LFS     + D  R  + QE F  ++++Y+    G+  AC  L   +  +  + EMA +   + +N
Sbjct:  783 FTEEEYEQLKGLVRSHDERYRSVNFGEELIKEMIMCSMFGIPMSTSAAISGYRLTVERITRIANNMDCFNDLPLMDQSSLLKENADLLVSLRGAIFFDSKKKGVNQVLISMGIDDLETIKTMFAPLMKESKMRHID-YKIFNSIQKVESDNSVEKRYNFLQGKVAESISDDIITILMTYIILFSVDFCTLQDRRRVEQLQEQFIRMLERYVYSKTGRKDACNTLANSLNAVTCIREMADIKKSRAIN 1520

HSP 2 Score: 52.7582 bits (125), Expect = 3.314e-6
Identity = 19/33 (57.58%), Postives = 27/33 (81.82%), Query Frame = 0

Query:   28 KNCVVTKHTRKHCQYCRFVKCLSVGMKSSWVMT 60
            K+C +   TRK+CQ+CR+ +CLSVGMK SWV++
Sbjct: 2472 KDCQINLKTRKNCQFCRYERCLSVGMKPSWVLS 2570

[Close]

BLAST of EMLSAG00000012965 vs. C. finmarchicus
Match: gi|592850980|gb|GAXK01106564.1| (TSA: Calanus finmarchicus comp119035_c1_seq1 transcribed RNA sequence)

HSP 1 Score: 87.0409 bits (214), Expect = 7.926e-17
Identity = 60/247 (24.29%), Postives = 112/247 (45.34%), Query Frame = 0

Query:  389 FSDYECNLISNIMIXXXXXXKLIPLRSETMAXMINCSYSNKTFPQDVCLEGYLVCMRRIIQLSSMLDFFTCFSMEDQKALLLTNTDMIVNIRTARFFQHGVHFKKHIFFVNNTDD-------------DPKYGRMDTFQIFQSPWACSDED--EKKYNDLMKKIFDLQLDEISTVLISMMSLFSSTNAKIHDELRANKTQEFFTNLMKKYIIHHVGKDAACQLLPKYIFMIAHLEEMAQVMVXKRLN 620
            F++ E   +  ++ S +E  + +    E +  MI CS           + GY + + RI ++++ +D F    + DQ +LL  N D++V++R A FF         +      DD             + K   +D ++IF S      ++  EK+YN L  K+ +   D+I T+L++ + LFS     + D  R  + QE F  ++++Y+    G+  AC  L   +  +  + EMA +   + +N
Sbjct: 1067 FTEEEYEQLKGLVRSHDERYRSVNFGEELIKEMIMCSMFGIPMSTSAAISGYRLTVERITRIANNMDCFNDLPLMDQSSLLKENADLLVSLRGAIFFDSKKKGVNQVLISMGIDDLETIKTMFAPLMKESKMRHID-YKIFNSIQKVESDNSVEKRYNFLQGKVAESISDDIITILMTYIILFSVDFCTLQDRRRVEQLQEQFIRMLERYVYSKTGRKDACNTLANSLNAVTCIREMADIKKSRAIN 1804

HSP 2 Score: 52.7582 bits (125), Expect = 3.380e-6
Identity = 19/33 (57.58%), Postives = 27/33 (81.82%), Query Frame = 0

Query:   28 KNCVVTKHTRKHCQYCRFVKCLSVGMKSSWVMT 60
            K+C +   TRK+CQ+CR+ +CLSVGMK SWV++
Sbjct: 2756 KDCQINLKTRKNCQFCRYERCLSVGMKPSWVLS 2854

[Close]

BLAST of EMLSAG00000012965 vs. C. finmarchicus
Match: gi|592857768|gb|GAXK01099794.1| (TSA: Calanus finmarchicus comp253537_c2_seq2 transcribed RNA sequence)

HSP 1 Score: 68.1662 bits (165), Expect = 5.477e-11
Identity = 50/219 (22.83%), Postives = 93/219 (42.47%), Query Frame = 0

Query:  421 MINCSYSNKTFPQDVCLEGYLVCMRRIIQLSSMLDFFTCFSMEDQKALLLTNTDMIVNIRTARFFQHGVHFKKHIFFVNNTDDDPKYGRMDTFQIFQSPWA-------------------CSDEDEKKYNDLMKKIFDLQLDEISTVLISMMSLFSSTNAKIHDELRANKTQEFFTNLMKKYIIHHVGKDAACQLLPKYIFMIAHLEEMAQVMVXKRLN 620
            M+ CS           ++GY + + RI ++++ L  FT     DQ ALL  N D++V++R A FF         +      +D      M+T +I   P                      + + E+ Y+ L  K+ D  LD I+T+L++ + LFSS    + D     +TQ  +  ++++ +     +  AC  +   +  +  + EMA +   + +N
Sbjct:  502 MLMCSMFGVAMSTSAAIQGYRLQVERITRIANSLKCFTNLQKADQVALLKENADLLVSLRGAIFFDKKKKGVDQVMSSMGIED------METIKILFKPLIQTHKMNHIDYLVFNSIQDPATKKTEEWYSFLQGKVADSILDNIATILMTYIILFSSDFCSLEDRRLVERTQHHYLRILERCLYGASSRMKACSKMASLLNAVTCVREMADIKKCRTIN 1140

HSP 2 Score: 44.2838 bits (103), Expect = 1.369e-3
Identity = 16/31 (51.61%), Postives = 24/31 (77.42%), Query Frame = 0

Query:   30 CVVTKHTRKHCQYCRFVKCLSVGMKSSWVMT 60
            C +   TRK+CQYCR++KCL VGM  ++V++
Sbjct: 1936 CEMNIKTRKNCQYCRYMKCLDVGMNPNYVLS 2028

[Close]

BLAST of EMLSAG00000012965 vs. L. salmonis peptides
Match: EMLSAP00000012965 (pep:novel supercontig:LSalAtl2s:LSalAtl2s98:1224628:1226761:1 gene:EMLSAG00000012965 transcript:EMLSAT00000012965 description:"snap_masked-LSalAtl2s98-processed-gene-12.8")

HSP 1 Score: 1278.08 bits (3306), Expect = 0.000e+0
Identity = 621/621 (100.00%), Postives = 621/621 (100.00%), Query Frame = 0

Query:    1 MLTRKQSNQLSWAHLQSEEISKSVDDNKNCVVTKHTRKHCQYCRFVKCLSVGMKSSWVMTEEDKKEKKEKAFIKKVKLKTCQLHRVSTKSKKSQQSFNKHTNSIKKEDNNGTTSSSSLRVPTLSEHIIPPRIDPSCLSSSLLSSHENPAQQSFTFSSASSPYSSMNRSLSCSPITMSNNTDALLSTHHSPREHSEFPGSPIVGTLSYGQSMNSSPIYKYLNTIWSSSLQNHLYNNGRSNELSPPSKQSHISNTYALNPEISMSNQSYYNFNSTLRQKDPLEPPSISQSNYSPKNNHGELFSYSPLSGKSSPQPAKTEKIPPSLCKKFMDNETLPELLVNSNFPIDLSQKYTSVVDSCNYKIHPSEILTNLSTVSKYETGIPKNLKNAGFSDYECNLISNIMISEEESSKLIPLRSETMAXMINCSYSNKTFPQDVCLEGYLVCMRRIIQLSSMLDFFTCFSMEDQKALLLTNTDMIVNIRTARFFQHGVHFKKHIFFVNNTDDDPKYGRMDTFQIFQSPWACSDEDEKKYNDLMKKIFDLQLDEISTVLISMMSLFSSTNAKIHDELRANKTQEFFTNLMKKYIIHHVGKDAACQLLPKYIFMIAHLEEMAQVMVXKRLNI 621
            MLTRKQSNQLSWAHLQSEEISKSVDDNKNCVVTKHTRKHCQYCRFVKCLSVGMKSSWVMTEEDKKEKKEKAFIKKVKLKTCQLHRVSTKSKKSQQSFNKHTNSIKKEDNNGTTSSSSLRVPTLSEHIIPPRIDPSCLSSSLLSSHENPAQQSFTFSSASSPYSSMNRSLSCSPITMSNNTDALLSTHHSPREHSEFPGSPIVGTLSYGQSMNSSPIYKYLNTIWSSSLQNHLYNNGRSNELSPPSKQSHISNTYALNPEISMSNQSYYNFNSTLRQKDPLEPPSISQSNYSPKNNHGELFSYSPLSGKSSPQPAKTEKIPPSLCKKFMDNETLPELLVNSNFPIDLSQKYTSVVDSCNYKIHPSEILTNLSTVSKYETGIPKNLKNAGFSDYECNLISNIMISEEESSKLIPLRSETMAXMINCSYSNKTFPQDVCLEGYLVCMRRIIQLSSMLDFFTCFSMEDQKALLLTNTDMIVNIRTARFFQHGVHFKKHIFFVNNTDDDPKYGRMDTFQIFQSPWACSDEDEKKYNDLMKKIFDLQLDEISTVLISMMSLFSSTNAKIHDELRANKTQEFFTNLMKKYIIHHVGKDAACQLLPKYIFMIAHLEEMAQVMVXKRLNI
Sbjct:    1 MLTRKQSNQLSWAHLQSEEISKSVDDNKNCVVTKHTRKHCQYCRFVKCLSVGMKSSWVMTEEDKKEKKEKAFIKKVKLKTCQLHRVSTKSKKSQQSFNKHTNSIKKEDNNGTTSSSSLRVPTLSEHIIPPRIDPSCLSSSLLSSHENPAQQSFTFSSASSPYSSMNRSLSCSPITMSNNTDALLSTHHSPREHSEFPGSPIVGTLSYGQSMNSSPIYKYLNTIWSSSLQNHLYNNGRSNELSPPSKQSHISNTYALNPEISMSNQSYYNFNSTLRQKDPLEPPSISQSNYSPKNNHGELFSYSPLSGKSSPQPAKTEKIPPSLCKKFMDNETLPELLVNSNFPIDLSQKYTSVVDSCNYKIHPSEILTNLSTVSKYETGIPKNLKNAGFSDYECNLISNIMISEEESSKLIPLRSETMAXMINCSYSNKTFPQDVCLEGYLVCMRRIIQLSSMLDFFTCFSMEDQKALLLTNTDMIVNIRTARFFQHGVHFKKHIFFVNNTDDDPKYGRMDTFQIFQSPWACSDEDEKKYNDLMKKIFDLQLDEISTVLISMMSLFSSTNAKIHDELRANKTQEFFTNLMKKYIIHHVGKDAACQLLPKYIFMIAHLEEMAQVMVXKRLNI 621

[Close]

BLAST of EMLSAG00000012965 vs. L. salmonis peptides
Match: EMLSAP00000008261 (pep:novel supercontig:LSalAtl2s:LSalAtl2s49:858199:860758:1 gene:EMLSAG00000008261 transcript:EMLSAT00000008261 description:"maker-LSalAtl2s49-augustus-gene-8.3")

HSP 1 Score: 152.14 bits (383), Expect = 4.521e-40
Identity = 86/240 (35.83%), Postives = 137/240 (57.08%), Query Frame = 0

Query:  389 FSDYECNLISNIMISEEESSKLIPLRSETMAXMINCSYSNKTFPQDVCLEGYLVCMRRIIQLSSMLDFFTCFSMEDQKALLLTNTDMIVNIRTARFFQHGVHFKKHIFFVNNTDDDPK--------YGRMDTFQIFQSPWACSDEDEKKYNDLMKKIFDLQLDEISTVLISMMSLFSSTNAKIHDELR-ANKTQEFFTNLMKKYIIHHVGKDAACQLLPKYIFMIAHLEEMAQVMVXKRL 619
            F+  E +L+  ++  E ES K IPL S  M   +  S  N+  P ++ L GY  C++RI    + ++FF   S EDQK LLL N DM+VNI+TAR+     +  +    +N  ++  K           +   +IF++PW  S ED+ +Y  LMK IFDL++DEI+ +L+  +++FS+TN    D +    + Q+ F++L+ KY+   +G  +   L PKYI ++A LEEMA+ ++ KRL
Sbjct:  235 FNKMEIHLVQEMLYWEIESRKKIPLNSVNMKSFMEYSQLNEPIPFEISLSGYNTCVQRITMFMTKINFFAALSPEDQKKLLLNNVDMVVNIKTARYLHPNNNITEQFEIINGKNNSEKSCTTSPATSNNVYYQEIFKNPWCSSFEDKTQYKALMKAIFDLEMDEITIILLIGLTIFSTTNCVDLDNINLIMRFQDVFSHLLYKYLCSTIGNSSTFLLFPKYINILAQLEEMAKTILNKRL 474

HSP 2 Score: 60.4622 bits (145), Expect = 6.441e-10
Identity = 32/51 (62.75%), Postives = 42/51 (82.35%), Query Frame = 0

Query:   27 NKNCVVTKHTRKHCQYCRFVKCLSVGMKSSWVMTEEDKKEKKEKAFIKKVK 77
            +K C +TK TRKHCQ+CRF KCL  GMK++WVM+E +K+EKKEK  +KK+K
Sbjct:  103 DKTCFITKETRKHCQFCRFNKCLEAGMKNTWVMSESEKREKKEKIRLKKLK 153

[Close]

BLAST of EMLSAG00000012965 vs. L. salmonis peptides
Match: EMLSAP00000012964 (pep:novel supercontig:LSalAtl2s:LSalAtl2s98:1204108:1205793:-1 gene:EMLSAG00000012964 transcript:EMLSAT00000012964 description:"snap_masked-LSalAtl2s98-processed-gene-12.16")

HSP 1 Score: 79.337 bits (194), Expect = 6.157e-18
Identity = 35/39 (89.74%), Postives = 36/39 (92.31%), Query Frame = 0

Query:   22 KSVDDNKNCVVTKHTRKHCQYCRFVKCLSVGMKSSWVMT 60
            K+   NKNCVVTKHTRKHCQYCRFVKCLSVGMKSSWVMT
Sbjct:    9 KTNGKNKNCVVTKHTRKHCQYCRFVKCLSVGMKSSWVMT 47

[Close]

BLAST of EMLSAG00000012965 vs. L. salmonis peptides
Match: EMLSAP00000012651 (pep:novel supercontig:LSalAtl2s:LSalAtl2s959:3535:5114:-1 gene:EMLSAG00000012651 transcript:EMLSAT00000012651 description:"maker-LSalAtl2s959-snap-gene-0.24")

HSP 1 Score: 60.8474 bits (146), Expect = 5.211e-10
Identity = 53/205 (25.85%), Postives = 96/205 (46.83%), Query Frame = 0

Query:  389 FSDYECNLISNIMISEEESSKLIP---LRSETMAXMINCSYSNKTFPQDVCLEGYLVCMRRIIQLSSMLDFFTCFSMEDQKALLLTNTDMIVNIRTARFF-QHGVHFKKHIFFVNNTDDDPKYGRMDTF-----QIFQSPWACSDEDEKKYNDLMKKIFDLQLDEISTVLISMMSLFSSTNAKIHDELRANKTQEFFTNLMKKYI 584
            F+  E   I N++ +++ +  LIP   L  + +  M N S  N T       E Y V   R+ + ++ +D F   + +D+K LL  N D +  +RT   F + G         + NT   P YG +  +     ++F+ PWA S+E    + +  +KI  L L E + +L+ +++LFS  +  + +  +  + QE    L  +Y+
Sbjct:  245 FTTEEXRHIDNLIFAQDSTRNLIPMPELVMDEILEMTNISSLNMT--SKGITEIYRVIYSRVAKFATYIDHFEELTSDDKKLLLSKNMDSMAILRTVVCFNKDGT--GNLTSQLKNTGS-PIYGNVGPYYISVERVFRHPWAKSEEHRHLFKETFRKIASLGLGEKAAMLLQLVTLFSVLDLPVQERNKIEQFQEQMALLCYRYL 444

HSP 2 Score: 58.9214 bits (141), Expect = 2.083e-9
Identity = 25/55 (45.45%), Postives = 39/55 (70.91%), Query Frame = 0

Query:   27 NKNCVVTKHTRKHCQYCRFVKCLSVGMKSSWVMTEEDKKEKKEKAFIKKVKLKTC 81
            ++ C++T  TRK+CQ+CR+ KCL  GMK SWV++EE+K  +    +++K K  TC
Sbjct:  131 DQACMITITTRKNCQFCRYKKCLESGMKPSWVLSEEEKSSRNLIKYVRKNK-TTC 184

[Close]

BLAST of EMLSAG00000012965 vs. L. salmonis peptides
Match: EMLSAP00000011907 (pep:novel supercontig:LSalAtl2s:LSalAtl2s83:639505:641027:-1 gene:EMLSAG00000011907 transcript:EMLSAT00000011907 description:"maker-LSalAtl2s83-augustus-gene-6.22")

HSP 1 Score: 56.9954 bits (136), Expect = 8.948e-9
Identity = 28/88 (31.82%), Postives = 49/88 (55.68%), Query Frame = 0

Query:   28 KNCVVTKHTRKHCQYCRFVKCLSVGMKSSWVMTEEDKKEKKEK-----------AFIKKVKLKTCQLHRVSTKSKKSQQSFNKHTNSI 104
            ++C++   TRK CQ CRF KC+S GM++SWV+ + +++ KK             +F     L + ++  V T + K ++SF  + NS+
Sbjct:  150 EDCIINLQTRKSCQLCRFQKCISAGMRASWVLPDGERRSKKSAMILNNNTPLLPSFDDPGGLTSLEVSFVFTINNKLRKSFFDNVNSM 237

[Close]

BLAST of EMLSAG00000012965 vs. L. salmonis peptides
Match: EMLSAP00000010267 (pep:novel supercontig:LSalAtl2s:LSalAtl2s680:110406:112508:1 gene:EMLSAG00000010267 transcript:EMLSAT00000010267 description:"maker-LSalAtl2s680-augustus-gene-1.19")

HSP 1 Score: 56.225 bits (134), Expect = 1.595e-8
Identity = 33/111 (29.73%), Postives = 55/111 (49.55%), Query Frame = 0

Query:   28 KNCVVTKHTRKHCQYCRFVKCLSVGMKSSWVMTEEDKKEKKEKAFIKKVK-----------LKTCQLHRVSTKSKKSQQSFNKHTNSIKKEDNNGTTS-SSSLRVPTLSEH 126
            K+C++   TRK CQ CRF KC+S GM+ SWV  + +++ KK    +   K           L + ++  V T +    ++F  + N++ K D++        L  PT SE+
Sbjct:  151 KDCIINLKTRKACQLCRFQKCVSAGMRVSWVFPDRERRSKKSAMTLNNNKPPLPSFNDPEGLTSIEVSIVFTINNNLHKNFLDNLNTMVKRDSDFLIDFVDYLAFPTRSEY 261

[Close]

BLAST of EMLSAG00000012965 vs. L. salmonis peptides
Match: EMLSAP00000004174 (pep:novel supercontig:LSalAtl2s:LSalAtl2s220:369739:371271:-1 gene:EMLSAG00000004174 transcript:EMLSAT00000004174 description:"augustus_masked-LSalAtl2s220-processed-gene-3.5")

HSP 1 Score: 54.299 bits (129), Expect = 7.136e-8
Identity = 20/40 (50.00%), Postives = 29/40 (72.50%), Query Frame = 0

Query:   25 DDNKNCVVTKHTRKHCQYCRFVKCLSVGMKSSWVMTEEDK 64
            D++  C++TK TR HCQ+CR+  CLS GM  S+V T E++
Sbjct:  182 DESGQCMITKATRTHCQFCRYRGCLSAGMXPSYVTTAEER 221

[Close]

BLAST of EMLSAG00000012965 vs. L. salmonis peptides
Match: EMLSAP00000001919 (pep:novel supercontig:LSalAtl2s:LSalAtl2s132:616435:622808:1 gene:EMLSAG00000001919 transcript:EMLSAT00000001919 description:"augustus_masked-LSalAtl2s132-processed-gene-6.5")

HSP 1 Score: 51.9878 bits (123), Expect = 3.407e-7
Identity = 19/47 (40.43%), Postives = 30/47 (63.83%), Query Frame = 0

Query:   18 EEISKSVDDNKNCVVTKHTRKHCQYCRFVKCLSVGMKSSWVMTEEDK 64
            +E++ +  +N++CV+ K  R  CQYCR++KCL  GMK   V  E  +
Sbjct:  121 KELTYACRENRDCVIDKRQRNRCQYCRYMKCLDTGMKREAVQEERHR 167

[Close]

BLAST of EMLSAG00000012965 vs. SwissProt
Match: gi|2500907|sp|Q24143.1|HR96_DROME (RecName: Full=Nuclear hormone receptor HR96; Short=dHR96; AltName: Full=Nuclear receptor subfamily 1 group J member 1)

HSP 1 Score: 57.3806 bits (137), Expect = 2.787e-7
Identity = 25/53 (47.17%), Postives = 34/53 (64.15%), Query Frame = 0

Query:   27 NKNCVVTKHTRKHCQYCRFVKCLSVGMKSSWVMTEEDKKEKKEKAFIKKVKLK 79
            N+NC +T  TR+ CQ CR  KCL +GMKS  +M+EEDK  K+ K    + K +
Sbjct:   46 NQNCDITVVTRRFCQKCRLRKCLDIGMKSENIMSEEDKLIKRRKIETNRAKRR 98

[Close]

BLAST of EMLSAG00000012965 vs. SwissProt
Match: gi|74902124|sp|Q5I7G2.1|RXR_LYMST (RecName: Full=Retinoic acid receptor RXR; AltName: Full=Retinoid X receptor; Short=LymRXR)

HSP 1 Score: 56.6102 bits (135), Expect = 3.183e-7
Identity = 23/54 (42.59%), Postives = 38/54 (70.37%), Query Frame = 0

Query:   18 EEISKSVDDNKNCVVTKHTRKHCQYCRFVKCLSVGMKSSWVMTEEDKKEKKEKA 71
            ++++ +  D+KNC++ K  R  CQYCR++KCLS+GMK   V  +E+++  KEK 
Sbjct:  147 KDLTYACRDDKNCMIDKRQRNRCQYCRYMKCLSMGMKREAV--QEERQRVKEKG 198

[Close]

BLAST of EMLSAG00000012965 vs. SwissProt
Match: gi|75017953|sp|Q8T5C6.1|RXR_BIOGL (RecName: Full=Retinoic acid receptor RXR; AltName: Full=RXR-like protein; AltName: Full=Retinoid X receptor; Short=BgRXR)

HSP 1 Score: 56.6102 bits (135), Expect = 3.443e-7
Identity = 23/54 (42.59%), Postives = 38/54 (70.37%), Query Frame = 0

Query:   18 EEISKSVDDNKNCVVTKHTRKHCQYCRFVKCLSVGMKSSWVMTEEDKKEKKEKA 71
            ++++ +  D+KNC++ K  R  CQYCR++KCLS+GMK   V  +E+++  KEK 
Sbjct:  147 KDLTYACRDDKNCMIDKRQRNRCQYCRYMKCLSMGMKREAV--QEERQRVKEKG 198

[Close]

BLAST of EMLSAG00000012965 vs. SwissProt
Match: gi|190411624|sp|Q1L673.2|VDRB_DANRE (RecName: Full=Vitamin D3 receptor B; Short=VDR-B; AltName: Full=1,25-dihydroxyvitamin D3 receptor B; AltName: Full=Nuclear receptor subfamily 1 group I member 1-B)

HSP 1 Score: 55.8398 bits (133), Expect = 4.769e-7
Identity = 26/72 (36.11%), Postives = 44/72 (61.11%), Query Frame = 0

Query:   27 NKNCVVTKHTRKHCQYCRFVKCLSVGMKSSWVMTEEDKKEKKEKAFIKKVKLKTCQLHRVSTKSKKSQQSFN 98
            N +C +TK  R+HCQ CR  +CL +GM   +++T+E+ + KKE   I++ K +  + HR + K + S +  N
Sbjct:   62 NGSCTITKDNRRHCQACRLKRCLDIGMMKEFILTDEEVQRKKE--LIQRRKDE--EAHREAQKPRLSDEQRN 129

[Close]

BLAST of EMLSAG00000012965 vs. SwissProt
Match: gi|52783388|sp|Q7SYN5.1|RXRBA_DANRE (RecName: Full=Retinoic acid receptor RXR-beta-A; AltName: Full=Nuclear receptor subfamily 2 group B member 2-A; AltName: Full=Retinoid X receptor beta-A)

HSP 1 Score: 55.8398 bits (133), Expect = 6.451e-7
Identity = 22/53 (41.51%), Postives = 35/53 (66.04%), Query Frame = 0

Query:   18 EEISKSVDDNKNCVVTKHTRKHCQYCRFVKCLSVGMKSSWVMTEEDKKEKKEK 70
            +++S +  DNK+C+V K  R  CQYCR+ KCL++GMK   V  E  +  ++E+
Sbjct:  155 KDLSYTCRDNKDCLVDKRQRNRCQYCRYQKCLAMGMKREVVQDERQRSVQEER 207

[Close]

BLAST of EMLSAG00000012965 vs. SwissProt
Match: gi|147732610|sp|A2T929.2|RXRAA_DANRE (RecName: Full=Retinoic acid receptor RXR-alpha-A; AltName: Full=Nuclear receptor subfamily 2 group B member 1-A; AltName: Full=RXRalpha-B; AltName: Full=Retinoid X receptor alpha-A)

HSP 1 Score: 55.4546 bits (132), Expect = 6.486e-7
Identity = 22/54 (40.74%), Postives = 38/54 (70.37%), Query Frame = 0

Query:   18 EEISKSVDDNKNCVVTKHTRKHCQYCRFVKCLSVGMKSSWVMTEEDKKEKKEKA 71
            ++++ +  DNK+CV+ K  R  CQYCR+ KCL++GMK   V  +E+++  KE++
Sbjct:  133 KDLTYTCRDNKDCVIDKRQRNRCQYCRYQKCLAMGMKREAV--QEERQRAKERS 184

[Close]

BLAST of EMLSAG00000012965 vs. SwissProt
Match: gi|114152848|sp|Q94407.3|NHR48_CAEEL (RecName: Full=Nuclear hormone receptor family member nhr-48)

HSP 1 Score: 55.8398 bits (133), Expect = 7.790e-7
Identity = 20/45 (44.44%), Postives = 30/45 (66.67%), Query Frame = 0

Query:   27 NKNCVVTKHTRKHCQYCRFVKCLSVGMKSSWVMTEEDKKEKKEKA 71
            N+ C +   +R+ CQ CR  KC +VGMK  W+M+EE + EKK++ 
Sbjct:  139 NEQCEINMVSRRFCQRCRLTKCFAVGMKKEWIMSEEARLEKKQRV 183

[Close]

BLAST of EMLSAG00000012965 vs. Select Arthropod Genomes
Match: EFX79885.1 (hypothetical protein DAPPUDRAFT_304351 [Daphnia pulex])

HSP 1 Score: 65.0846 bits (157), Expect = 4.473e-10
Identity = 34/84 (40.48%), Postives = 51/84 (60.71%), Query Frame = 0

Query:   30 CVVTKHTRKHCQYCRFVKCLSVGMKSSWVMTEEDKKEKKEKAFIK-KVKLKTCQLH-RVSTKSKKSQQSFNKHTNSIKKEDNNG 111
            CV++   RK CQYCR  +C ++GM+ SWVMTEE++     KA +K + + K+C+    VST S  S Q+ N  +NS   + + G
Sbjct:   93 CVISLSNRKSCQYCRMKRCFAIGMEKSWVMTEEER-----KALMKARAEKKSCKRSPTVSTSSNASAQNLNTSSNSSGGDQSPG 171

[Close]

BLAST of EMLSAG00000012965 vs. Select Arthropod Genomes
Match: gb|KFM66780.1| (Vitamin D3 receptor B, partial [Stegodyphus mimosarum])

HSP 1 Score: 58.5362 bits (140), Expect = 3.871e-8
Identity = 59/240 (24.58%), Postives = 101/240 (42.08%), Query Frame = 0

Query:  371 STVSKYETGIPKNLKNAGFSDYECNLISNIMISEEESSKLIPLRSETMAXMINCSYSNKTFPQDVCLEGYLVCMRRIIQLSSMLDFFTCFSMEDQKALLLTNTDMIVNIRTARFFQHGVHFKKHIFFVNNTDDDPKYGRMDTFQIFQSPWACSDEDEKKYNDLMKKIFDLQLDEISTVLISMMSLFSSTNAKIHDELRANKTQEFFTNLMKKYIIHHVGKDAACQLLPKYIFMIAHLEEM 610
            ++ S+YE  I    K  G  D     I  ++ + E S   +P  SE +  + + S   +T      L+ +   +++    S  LD F+     DQ+ LL T    +  IR A  +   +    HI         P Y    T          S E   K+ + ++ I +L  DE +T+L+ ++ L S     + +E+   + QE F  LMKKY++   G++    L PK +  +  L E+
Sbjct:  175 TSFSEYEPDINDLPKYLGPEDM--RTIETLVNAYEASYTEVPF-SEHLHKVGSASGRTRT----EILDMFFTTVKQFTNFSQRLDTFSKIQQHDQEILLRTGVLELCFIRGAYVYDEKLSRWPHI-------GKPMYRDSPTLDAEDIKKLVSPELFTKHMEFIRSIKELHPDEATTMLLLVIVLLSPDRPGLENEVLVAEEQEKFYILMKKYMLWRYGEENTLILYPKLLLRLPDLREL 400

HSP 2 Score: 58.151 bits (139), Expect = 5.340e-8
Identity = 22/35 (62.86%), Postives = 29/35 (82.86%), Query Frame = 0

Query:   30 CVVTKHTRKHCQYCRFVKCLSVGMKSSWVMTEEDK 64
            C +T  +RK CQYCRF KCLS+GM++ WVMTEE++
Sbjct:  107 CEITITSRKCCQYCRFKKCLSIGMETGWVMTEEER 141

[Close]

BLAST of EMLSAG00000012965 vs. Select Arthropod Genomes
Match: gb|KFM75069.1| (Nuclear hormone receptor HR96, partial [Stegodyphus mimosarum])

HSP 1 Score: 57.7658 bits (138), Expect = 8.710e-8
Identity = 22/42 (52.38%), Postives = 30/42 (71.43%), Query Frame = 0

Query:   29 NCVVTKHTRKHCQYCRFVKCLSVGMKSSWVMTEEDKKEKKEK 70
            NC V   TR+ CQ CR  KC ++GMK  W+M+EE+KK K++K
Sbjct:   54 NCKVDMVTRRFCQKCRLKKCFAIGMKKEWIMSEEEKKAKRDK 95

[Close]

BLAST of EMLSAG00000012965 vs. Select Arthropod Genomes
Match: gb|EEC00893.1| (retinoid X receptor, putative, partial [Ixodes scapularis])

HSP 1 Score: 57.3806 bits (137), Expect = 9.082e-8
Identity = 20/42 (47.62%), Postives = 33/42 (78.57%), Query Frame = 0

Query:   29 NCVVTKHTRKHCQYCRFVKCLSVGMKSSWVMTEEDKKEKKEK 70
             C +T  +RK CQ CRF KCLS+GM++SWVM+E++++ + ++
Sbjct:  131 RCHITLTSRKSCQACRFAKCLSIGMEASWVMSEQERRARMQQ 172

[Close]

BLAST of EMLSAG00000012965 vs. Select Arthropod Genomes
Match: EEB17317.1 (nuclear receptor nhr-48, putative [Pediculus humanus corporis])

HSP 1 Score: 57.3806 bits (137), Expect = 1.036e-7
Identity = 20/44 (45.45%), Postives = 32/44 (72.73%), Query Frame = 0

Query:   27 NKNCVVTKHTRKHCQYCRFVKCLSVGMKSSWVMTEEDKKEKKEK 70
            NK C++   TR+ CQ CR +KC  +GM+  ++M+E+DK EK++K
Sbjct:   86 NKKCIINPVTRRFCQLCRLIKCFEIGMRKEYIMSEDDKLEKRKK 129

[Close]

BLAST of EMLSAG00000012965 vs. Select Arthropod Genomes
Match: AAF56379.1 (hormone receptor-like in 96 [Drosophila melanogaster])

HSP 1 Score: 57.3806 bits (137), Expect = 1.351e-7
Identity = 25/53 (47.17%), Postives = 34/53 (64.15%), Query Frame = 0

Query:   27 NKNCVVTKHTRKHCQYCRFVKCLSVGMKSSWVMTEEDKKEKKEKAFIKKVKLK 79
            N+NC +T  TR+ CQ CR  KCL +GMKS  +M+EEDK  K+ K    + K +
Sbjct:   46 NQNCDITVVTRRFCQKCRLRKCLDIGMKSENIMSEEDKLIKRRKIETNRAKRR 98

[Close]

BLAST of EMLSAG00000012965 vs. Select Arthropod Genomes
Match: EAA08573.6 (AGAP004224-PA [Anopheles gambiae str. PEST])

HSP 1 Score: 56.225 bits (134), Expect = 3.489e-7
Identity = 22/44 (50.00%), Postives = 31/44 (70.45%), Query Frame = 0

Query:   27 NKNCVVTKHTRKHCQYCRFVKCLSVGMKSSWVMTEEDKKEKKEK 70
            N+NC +T  TR+ CQ CR  KC  +GMK  ++M+EEDK  K++K
Sbjct:   75 NENCDITIVTRRFCQKCRLEKCFRIGMKKEYIMSEEDKVLKRKK 118

[Close]

BLAST of EMLSAG00000012965 vs. nr
Match: gi|657600354|gb|AID52838.1| (nuclear receptor [Tigriopus japonicus])

HSP 1 Score: 199.904 bits (507), Expect = 8.064e-53
Identity = 100/246 (40.65%), Postives = 150/246 (60.98%), Query Frame = 0

Query:  389 FSDYECNLISNIMISEEESSKLIPLRSETMAXMINCSYSNKTFPQDVCLEGYLVCMRRIIQLSSMLDFFTCFSMEDQKALLLTNTDMIVNIRTARFFQHGVHFKKHIFFVNNTDDDPKY----GRMDTFQ---------IFQSPWACSDEDEKKYNDLMKKIFDLQLDEISTVLISMMSLFSSTNAKIHDELRANKTQEFFTNLMKKYIIHHVGKDAACQLLPKYIFMIAHLEEMAQVMVXKRLNI 621
            F+  E  L+ NI+ +E  +++ IP+  E +  MI  + +    P    +EGY  CMRRIIQ  S LDFF  F + DQ+ LLL NTDMIVN+R+AR  + G++ +  I   N+    P        MD FQ         IFQSPWAC ++ E ++  LM+ +F L++D  +T L++M+ LFS++ A++ D  RA + QEFFT L+ +Y+   +G+  A +LLPKY+ +I+ LEEM+Q+M+ KRL I
Sbjct:  318 FTSEETFLVENIINTEVATTQSIPVNPEVLMGMIEAAKNGTVIPYSALVEGYTTCMRRIIQFVSKLDFFQSFVLPDQRDLLLHNTDMIVNLRSARLLRPGINLQAQI---NHATGGPSLENTTTSMDLFQCPERLEYKQIFQSPWACDEKHEAQFASLMENLFHLEMDRTTTTLMAMIVLFSTSYAELKDSHRAVQNQEFFTQLLYRYLGSMIGRKNAIKLLPKYMHLISQLEEMSQIMIAKRLTI 560

HSP 2 Score: 70.4774 bits (171), Expect = 3.899e-9
Identity = 36/50 (72.00%), Postives = 47/50 (94.00%), Query Frame = 0

Query:   27 NKNCVVTKHTRKHCQYCRFVKCLSVGMKSSWVMTEEDKKEKKEKAFIKKV 76
            +K+C +TKHTRKHCQYCRF KC+++GM++SWVMTEEDK+EKKEKA +K+V
Sbjct:  102 SKSCPITKHTRKHCQYCRFQKCMAIGMRASWVMTEEDKQEKKEKARLKRV 151

[Close]

BLAST of EMLSAG00000012965 vs. nr
Match: gi|657600364|gb|AID52843.1| (nuclear receptor [Tigriopus japonicus])

HSP 1 Score: 120.168 bits (300), Expect = 2.333e-25
Identity = 61/231 (26.41%), Postives = 119/231 (51.52%), Query Frame = 0

Query:  393 ECNLISNIMISEEESSKLIPLRSETMAXMINCSYSNKTFPQDVCLEGYLVCMRRIIQLSSMLDFFTCFSMEDQKALLLTNTDMIVNIRTARFFQHGVHFKKHIFFVNNTDDDPKYG----RMDTFQIFQSPWACSDEDEKKYNDLMKKIFDLQLDEISTVLISMMSLFSSTNAKIHDELRANKTQEFFTNLMKKYIIHHVGKDAACQLLPKYIFMIAHLEEMAQVMVXKRL 619
            E   + ++++ E    + IP+R ET+   +  +      P D C++G+  C++RI +  S LDFF+     DQ+ LL  NT M+VN+++AR  +     +  +   N T  +        R+   Q F SPW CS + E++Y  LM ++F+L +D++++VL+ +M++ +    ++    + +  + +F+ L+ K++    G+        K    +  L EMA ++  +RL
Sbjct:  244 EKTFLEDLVLKEAACRREIPIRQETLIKFMESAKHETIIPYDACVDGFSTCVQRISKFMSRLDFFSSLMWSDQQILLRCNTHMVVNLKSARMLKPTNSLQGQLCLTNGTQPNQAISASPNRLTYSQFFNSPWCCSADKEEEYKKLMDELFNLDMDDVTSVLMMIMTMLAPPTEELIQSNQVSSRRSYFSQLLYKHLYSVKGEQLGRVSFQKCTQFLDKLREMAHILKQERL 474

HSP 2 Score: 72.7886 bits (177), Expect = 6.057e-10
Identity = 30/53 (56.60%), Postives = 40/53 (75.47%), Query Frame = 0

Query:   27 NKNCVVTKHTRKHCQYCRFVKCLSVGMKSSWVMTEEDKKEKKEKAFIKKVKLK 79
            N  C VTK TRKHCQ CRF KC+ +GMK SWVMTE+++K+ + K   KK++L+
Sbjct:  100 NSKCPVTKETRKHCQSCRFKKCIDIGMKPSWVMTEDERKDNRAKILKKKMELR 152

[Close]

BLAST of EMLSAG00000012965 vs. nr
Match: gi|321468902|gb|EFX79885.1| (hypothetical protein DAPPUDRAFT_304351 [Daphnia pulex])

HSP 1 Score: 65.0846 bits (157), Expect = 2.188e-7
Identity = 34/84 (40.48%), Postives = 51/84 (60.71%), Query Frame = 0

Query:   30 CVVTKHTRKHCQYCRFVKCLSVGMKSSWVMTEEDKKEKKEKAFIK-KVKLKTCQLH-RVSTKSKKSQQSFNKHTNSIKKEDNNG 111
            CV++   RK CQYCR  +C ++GM+ SWVMTEE++     KA +K + + K+C+    VST S  S Q+ N  +NS   + + G
Sbjct:   93 CVISLSNRKSCQYCRMKRCFAIGMEKSWVMTEEER-----KALMKARAEKKSCKRSPTVSTSSNASAQNLNTSSNSSGGDQSPG 171

[Close]

BLAST of EMLSAG00000012965 vs. nr
Match: gi|358342639|dbj|GAA50061.1| (nuclear receptor subfamily 1 group I [Clonorchis sinensis])

HSP 1 Score: 63.5438 bits (153), Expect = 5.330e-7
Identity = 44/151 (29.14%), Postives = 78/151 (51.66%), Query Frame = 0

Query:   27 NKNCVVTKHTRKHCQYCRFVKCLSVGMKSSWVMTEEDKKEKKEKAFIKKVKLKTCQLHRVSTKSKKSQQSFNKHTNSIKKEDNNG---TTSSSSLRVPTLSEHIIPPRIDPSCLSSSLLSSHENPAQQSFT---FSSASSPYSSMNRSLSC 171
            N+ C +T  TR+ C +CR  KC + GMKSS ++ ++ K+E+ EK   K  + +T  L+ +S     ++ +   ++ ++  +D N     T SS+  V T    + P   +P+ LSS++  S+ N   ++F      + +S  S MN  L C
Sbjct:   49 NEKCTITVATRRFCSHCRLKKCFAAGMKSSLILDDKAKQERHEK-IAKNRQARTDPLYPISKPGLDTKTAVASNSGNLFLQDTNAGETATDSSTSAVETFERLLSPDAQEPNVLSSNM--SYTNDQWRTFLEIPTEADASHVSDMNDRLYC 196

[Close]

BLAST of EMLSAG00000012965 vs. nr
Match: gi|657600360|gb|AID52841.1| (nuclear receptor [Tigriopus japonicus])

HSP 1 Score: 63.5438 bits (153), Expect = 6.003e-7
Identity = 27/47 (57.45%), Postives = 36/47 (76.60%), Query Frame = 0

Query:   29 NCVVTKHTRKHCQYCRFVKCLSVGMKSSWVMTEEDKKEKKEKAFIKK 75
            NCVVT  TRK+CQ CRF KC+  GMK+SWV+++E+K E+ EK   +K
Sbjct:  164 NCVVTPATRKNCQKCRFDKCVEAGMKASWVLSDEEKLERLEKKRSRK 210

[Close]

BLAST of EMLSAG00000012965 vs. Tigriopus kingsejongenis genes
Match: snap_masked-scaffold2498_size15023-processed-gene-0.1 (protein:Tk12056 transcript:snap_masked-scaffold2498_size15023-processed-gene-0.1-mRNA-1 annotation:"vitamin d3 receptor b-like")

HSP 1 Score: 206.453 bits (524), Expect = 6.114e-59
Identity = 101/243 (41.56%), Postives = 148/243 (60.91%), Query Frame = 0

Query:  389 FSDYECNLISNIMISEEESSKLIPLRSETMAXMINCSYSNKTFPQDVCLEGYLVCMRRIIQLSSMLDFFTCFSMEDQKALLLTNTDMIVNIRTARFFQHGVHFKKHIFFVNNTDD-DPKYGRMDTF---------QIFQSPWACSDEDEKKYNDLMKKIFDLQLDEISTVLISMMSLFSSTNAKIHDELRANKTQEFFTNLMKKYIIHHVGKDAACQLLPKYIFMIAHLEEMAQVMVXKRLNI 621
            F+  E  L+ NIM +E  +++ IP+  E +  MI+ +      P    +EGY +CMRRIIQ  S LDFF  FS+ DQ++LLL NTDMIVNIR+AR  + G++ +  +         +P    MD F         QIFQSPWAC    E ++  LM+ +F L++D  +T L+SM+ LFS++   + D  RA + QEFF+ L+ +Y+   +G+  A QLLPKY+ MI+ LEEM+Q+M+ KRL +
Sbjct:  336 FTSEEVFLVDNIMNTEIATTRSIPVNPEVLMVMIDAAKKGTAIPYPALVEGYTICMRRIIQFVSKLDFFQSFSLPDQRSLLLHNTDMIVNIRSARLLRPGINLQAQVNHATGGPSLEPACASMDLFKCQERLEYKQIFQSPWACDPHHEAQFASLMENLFHLEMDVTTTTLMSMIVLFSTSYTDLKDSARAVQNQEFFSQLLYRYLGSMIGRKNATQLLPKYMHMISQLEEMSQIMMTKRLTL 578

HSP 2 Score: 73.9442 bits (180), Expect = 4.787e-14
Identity = 38/50 (76.00%), Postives = 47/50 (94.00%), Query Frame = 0

Query:   27 NKNCVVTKHTRKHCQYCRFVKCLSVGMKSSWVMTEEDKKEKKEKAFIKKV 76
            NK+C +TKHTRKHCQYCRF KC+++GM++SWVMTEEDK+EKKEKA IK+V
Sbjct:  114 NKSCSITKHTRKHCQYCRFQKCMAIGMRASWVMTEEDKREKKEKARIKRV 163

[Close]

BLAST of EMLSAG00000012965 vs. Tigriopus kingsejongenis genes
Match: snap_masked-scaffold1268_size51707-processed-gene-0.2 (protein:Tk07212 transcript:snap_masked-scaffold1268_size51707-processed-gene-0.2-mRNA-1 annotation:"vitamin d3 receptor b-like")

HSP 1 Score: 206.453 bits (524), Expect = 6.114e-59
Identity = 101/243 (41.56%), Postives = 148/243 (60.91%), Query Frame = 0

Query:  389 FSDYECNLISNIMISEEESSKLIPLRSETMAXMINCSYSNKTFPQDVCLEGYLVCMRRIIQLSSMLDFFTCFSMEDQKALLLTNTDMIVNIRTARFFQHGVHFKKHIFFVNNTDD-DPKYGRMDTF---------QIFQSPWACSDEDEKKYNDLMKKIFDLQLDEISTVLISMMSLFSSTNAKIHDELRANKTQEFFTNLMKKYIIHHVGKDAACQLLPKYIFMIAHLEEMAQVMVXKRLNI 621
            F+  E  L+ NIM +E  +++ IP+  E +  MI+ +      P    +EGY +CMRRIIQ  S LDFF  FS+ DQ++LLL NTDMIVNIR+AR  + G++ +  +         +P    MD F         QIFQSPWAC    E ++  LM+ +F L++D  +T L+SM+ LFS++   + D  RA + QEFF+ L+ +Y+   +G+  A QLLPKY+ MI+ LEEM+Q+M+ KRL +
Sbjct:  336 FTSEEVFLVDNIMNTEIATTRSIPVNPEVLMVMIDAAKKGTAIPYPALVEGYTICMRRIIQFVSKLDFFQSFSLPDQRSLLLHNTDMIVNIRSARLLRPGINLQAQVNHATGGPSLEPACASMDLFKCQERLEYKQIFQSPWACDPHHEAQFASLMENLFHLEMDVTTTTLMSMIVLFSTSYTDLKDSARAVQNQEFFSQLLYRYLGSMIGRKNATQLLPKYMHMISQLEEMSQIMMTKRLTL 578

HSP 2 Score: 73.9442 bits (180), Expect = 4.787e-14
Identity = 38/50 (76.00%), Postives = 47/50 (94.00%), Query Frame = 0

Query:   27 NKNCVVTKHTRKHCQYCRFVKCLSVGMKSSWVMTEEDKKEKKEKAFIKKV 76
            NK+C +TKHTRKHCQYCRF KC+++GM++SWVMTEEDK+EKKEKA IK+V
Sbjct:  114 NKSCSITKHTRKHCQYCRFQKCMAIGMRASWVMTEEDKREKKEKARIKRV 163

[Close]

BLAST of EMLSAG00000012965 vs. Tigriopus kingsejongenis genes
Match: maker-scaffold323_size206388-snap-gene-1.16 (protein:Tk12478 transcript:maker-scaffold323_size206388-snap-gene-1.16-mRNA-1 annotation:"hypothetical protein DAPPUDRAFT_304351")

HSP 1 Score: 140.584 bits (353), Expect = 3.797e-36
Identity = 71/247 (28.74%), Postives = 133/247 (53.85%), Query Frame = 0

Query:  379 GIPKNLKNAGFSDYECNLISNIMISEEESSKLIPLRSETMAXMINCSYSNKTFPQDVCLEGYLVCMRRIIQLSSMLDFFTCFSMEDQKALLLTNTDMIVNIRTARFFQHGVHFKKHIFFVNNT------DDDPKYGRMDTFQIFQSPWACSDEDEKKYNDLMKKIFDLQLDEISTVLISMMSLFSSTNAKIHDELRANKTQEFFTNLMKKYIIHHVGKDAACQLLPKYIFMIAHLEEMAQVMVXKRL 619
            G P  L+    S +E   + ++++ E    K IPLR ET+   I+ + +    P D C++G+  C++RI +    LDFF+     DQ+ LL  NT M+VN+++AR  +    F+  +   N +            GR++  QIF SPW CS + E +Y DLM+++F+L++D+I++VL+ +M++ +  N ++    +    + +F+ L+ +Y+    G+        +    +A L++MA ++  +RL
Sbjct:  223 GTPNVLQTQPTS-HEHTFLHDLVLKEATCRKEIPLRQETLMKFIDSAKNGTIIPYDACVDGFSTCVQRISKFMGRLDFFSSLMWSDQQILLRCNTHMVVNLKSARMLKPSNDFQGQLCLTNGSQPHNTNGQQSSKGRLNYSQIFNSPWCCSADKEDEYKDLMEELFNLEMDDITSVLMMIMTILAPPNEELIQSSQVASRRTYFSQLLYRYLQSSRGEQEGRVTFQRCTQFLAKLKDMATILKQERL 468

HSP 2 Score: 72.7886 bits (177), Expect = 9.153e-14
Identity = 30/53 (56.60%), Postives = 40/53 (75.47%), Query Frame = 0

Query:   27 NKNCVVTKHTRKHCQYCRFVKCLSVGMKSSWVMTEEDKKEKKEKAFIKKVKLK 79
            N  C VTK TRKHCQ CRF KC+ +GMK SWVMTE+++K+ + K   KK++L+
Sbjct:   95 NSKCPVTKETRKHCQSCRFSKCVDIGMKPSWVMTEDERKDNRAKILKKKMELR 147

[Close]

BLAST of EMLSAG00000012965 vs. Tigriopus kingsejongenis genes
Match: maker-scaffold187_size272365-snap-gene-0.15 (protein:Tk10312 transcript:maker-scaffold187_size272365-snap-gene-0.15-mRNA-1 annotation:"nuclear receptor")

HSP 1 Score: 82.4185 bits (202), Expect = 3.331e-17
Identity = 58/211 (27.49%), Postives = 104/211 (49.29%), Query Frame = 0

Query:  422 INCSYSNKTFPQDVCLEGYLVCMRRIIQLSSMLDFFTCFSMEDQKALLLTNTDMIVNIRTARFFQ-HGVHFKKH-----IFFVNNTDD-----DPKYGRMDTFQIFQSPWACSDEDEKKYNDLMKKIFDLQLDEISTVLISMMSLF--SSTNAKIHDELRANKTQEFFTNLMKKYIIHHVGKDAACQLLPKYIFMIAHLEEMAQVMVXKRL 619
            I+ +YS            Y   +R++ + +  ++ F    + D+K LLL N D + NIR   FF     +         +F V+N         P+ G +   Q F +PWA S++ E+K+  LM +I DL LD+ +  +++++SLF    TN   H ++ A K Q+ +  L+ +Y+ H  G+  A      ++ M+ +L+EM+ +M  K +
Sbjct:   98 IHSAYSQTPLDFTAICWAYTKSIRKLTRFAQNVEDFNALEVHDRKLLLLENLDPMFNIRVGHFFNCDATNLLDQLECLAVFDVSNLKSYIGGWIPEVGPLHWNQFFVTPWANSEQHERKFEGLMSEIKDLGLDKSTATILTVVSLFCPEGTNTFKHPDVVA-KMQQKYIGLLFRYLCHTRGRSEAELKFSSFLSMMGNLKEMSDIMKNKTI 307

[Close]

BLAST of EMLSAG00000012965 vs. Tigriopus kingsejongenis genes
Match: maker-scaffold267_size230776-snap-gene-1.25 (protein:Tk02974 transcript:maker-scaffold267_size230776-snap-gene-1.25-mRNA-1 annotation:"vitamin d3 receptor b")

HSP 1 Score: 63.929 bits (154), Expect = 6.643e-11
Identity = 27/49 (55.10%), Postives = 35/49 (71.43%), Query Frame = 0

Query:   27 NKNCVVTKHTRKHCQYCRFVKCLSVGMKSSWVMTEEDKKEKKEKAFIKK 75
            N  C VT  TRK+CQ CRF KCL  GMK+SWV+++E+K E+ EK   +K
Sbjct:  190 NNQCAVTPATRKNCQKCRFDKCLGAGMKASWVLSDEEKLERLEKKRSRK 238

HSP 2 Score: 59.6918 bits (143), Expect = 1.609e-9
Identity = 49/216 (22.69%), Postives = 92/216 (42.59%), Query Frame = 0

Query:  405 EESSKLIPLRSETMAXMINCSYSNKTFPQDVCLEGYLVCMRRIIQLSSMLDFFTCFSMEDQKALLLTNTDMIVNIRTA-RFFQHG-VHFKKHIFFVNNTDDDP---KYGRMDTFQIFQSPWACSDEDEKKYNDLMKKIFD-LQLDEISTVLISMMSLFSSTNAKIHDELRANKTQEFFTNLMKKYIIHHVGKDAACQLLPKYIFMIAHLEEMAQVM 614
            E S   IP+    +  M+  +++ +    D  L+ +     RI+   + L  F+  S  D+K LL  N DMI  I+ A   F  G  +    I F  + ++      +  M+  Q+F  PWA ++   + +    +++   L+ D   + L  +++LF   N ++ DE      QE    L+ KY+    G   A       +  +  L  +A+++
Sbjct:  319 EGSRHTIPMSGPVLEQMVKLTHTGEGIHPDTILDFFKTVYCRIVNSVNQLGSFSQLSDGDKKRLLSKNMDMISTIQIASTLFADGRANLDAQIQFTGHAEEIANLTGHMGMEVKQLFVRPWAKNESHMEYFYSTTRQLAKLLREDPRVSTLFQLVALFHGENLELKDERIIEAVQEAMATLLHKYLKSRFGPQLANSTFSNLMSSLYDLRYLAEIL 534

[Close]

BLAST of EMLSAG00000012965 vs. Tigriopus kingsejongenis genes
Match: maker-scaffold188_size271682-snap-gene-1.24 (protein:Tk00140 transcript:maker-scaffold188_size271682-snap-gene-1.24-mRNA-1 annotation:"vitamin d3 receptor-like")

HSP 1 Score: 59.6918 bits (143), Expect = 1.627e-9
Identity = 53/237 (22.36%), Postives = 99/237 (41.77%), Query Frame = 0

Query:  397 ISNIMISEEESSKLIPLRSETMAXMINCSYSNKTFPQDVCLEGYLVCMRRIIQLSSMLDFFTCFSMEDQKALLLTNTDMIVNIRTARFFQHGVHFKKHIFFVNNTDD--------------DPKYGRMDTFQIFQSPWACSDE-DEKKYNDLMKKIFDLQLDEISTV--LISMMS---LFSSTNAKIHDELRANKTQEFFTNLMKKYIIHHVGKDAACQLLPKYIFMIAHLEEMAQV 613
            I  I    ++  + +    + +  M+ CS  +        +  Y + ++R+ Q+++  D F      DQ+AL+ TN D+IV++R A FF         I F    DD                  GR+  ++ + S      E  E KY+ LM ++  L    +ST+  L+ +MS   LF     ++ D+ R    Q+   N++++ I        A  ++ + +  I  L E+  +
Sbjct:  402 IRQICYEYDKCYRSVAFGEDLIKDMVMCSVYSIPLDPYTAMTAYRLMIQRVAQVANDFDLFKGLDGLDQRALMKTNADLIVSLRGAVFFDEKKKGLDQILFSLGVDDVELGKEVLMSTMKATGTLGRIH-YRNYNSIQQLDHEPTENKYSMLMTRVGSL----VSTIPDLVKIMSYVLLFCPDYCELEDKPRVQNIQQMMLNMVQRMIQAQFPSQIAKTMMSQVLRCIPDLRELTLI 633

HSP 2 Score: 51.9878 bits (123), Expect = 4.056e-7
Identity = 26/69 (37.68%), Postives = 39/69 (56.52%), Query Frame = 0

Query:   30 CVVTKHTRKHCQYCRFVKCLSVGMKSSWVMTEEDKKEKKEKAFIKKVKLKTCQLHRVSTKSKKSQQSFN 98
            C V   +RK+CQ CR+ KCL  GMK +WV++EE++  +  K   KK +    Q  + S+   +S  S N
Sbjct:  203 CQVMLKSRKNCQKCRYDKCLLAGMKPTWVLSEEERSRRFRKTREKKAR----QGSQASSPGHRSDDSSN 267

[Close]

BLAST of EMLSAG00000012965 vs. Tigriopus kingsejongenis genes
Match: maker-scaffold48_size466083-snap-gene-1.23 (protein:Tk05971 transcript:maker-scaffold48_size466083-snap-gene-1.23-mRNA-1 annotation:"retinoid x")

HSP 1 Score: 54.6842 bits (130), Expect = 1.460e-8
Identity = 29/82 (35.37%), Postives = 52/82 (63.41%), Query Frame = 0

Query:   26 DNKNCVVTKHTRKHCQYCRFVKCLSVGMKSSWVMTEEDKKEKKEKAFIKKVKLKTCQL--------HRVSTKSKKSQQSFNK 99
            +++NC +   +RK CQYCRF KCL  GM  SWV+++++++++ +K   K+ +LK  QL         R++++S + +QS  K
Sbjct:  100 NDQNCHIDIKSRKCCQYCRFKKCLDTGMNPSWVLSDDEREQRFQKRKAKQ-ELKQEQLAFSGHGLSRRMASRSGREKQSHPK 180

[Close]

BLAST of EMLSAG00000012965 vs. Tigriopus kingsejongenis genes
Match: snap_masked-scaffold28_size608977-processed-gene-1.5 (protein:Tk05738 transcript:snap_masked-scaffold28_size608977-processed-gene-1.5-mRNA-1 annotation:"thyroid hormone receptor alpha 1")

HSP 1 Score: 55.8398 bits (133), Expect = 2.070e-8
Identity = 21/44 (47.73%), Postives = 32/44 (72.73%), Query Frame = 0

Query:   24 VDDNKNCVVTKHTRKHCQYCRFVKCLSVGMKSSWVMTEEDKKEK 67
            V+ N NC++ K TR+ CQ CRF KCL  GMK +WV+++ ++K +
Sbjct:   84 VEANSNCLIDKTTRRRCQGCRFRKCLLSGMKITWVLSDHERKRR 127

[Close]

BLAST of EMLSAG00000012965 vs. Tigriopus kingsejongenis genes
Match: snap_masked-scaffold58_size443543-processed-gene-3.1 (protein:Tk00704 transcript:snap_masked-scaffold58_size443543-processed-gene-3.1-mRNA-1 annotation:"nuclear hormone receptor")

HSP 1 Score: 50.0618 bits (118), Expect = 3.078e-8
Identity = 19/29 (65.52%), Postives = 23/29 (79.31%), Query Frame = 0

Query:   27 NKNCVVTKHTRKHCQYCRFVKCLSVGMKS 55
            NK+C VTKH R  CQYCR  KCL++GM+S
Sbjct:   46 NKDCEVTKHHRNRCQYCRLQKCLAMGMRS 74

[Close]

BLAST of EMLSAG00000012965 vs. Tigriopus kingsejongenis genes
Match: maker-scaffold92_size382268-snap-gene-1.23 (protein:Tk08749 transcript:maker-scaffold92_size382268-snap-gene-1.23-mRNA-1 annotation:"hormone receptor-like 97b")

HSP 1 Score: 53.9138 bits (128), Expect = 9.657e-8
Identity = 23/50 (46.00%), Postives = 33/50 (66.00%), Query Frame = 0

Query:   29 NCVVTKHTRKHCQYCRFVKCLSVGMKSSWVMTEED-KKEKKEKAFIKKVK 77
            +C +T  TRK+CQ+CRF +C   GMK SWV+ + D KK  KE   ++ V+
Sbjct:  363 SCTITLKTRKNCQFCRFQRCERAGMKRSWVLADGDRKKGAKEPLKVEGVE 412

The following BLAST results are available for this feature:

BLAST of EMLSAG00000012965 vs. GO
BLAST of EMLSAG00000012965 vs. C. finmarchicus
BLAST of EMLSAG00000012965 vs. L. salmonis peptides
BLAST of EMLSAG00000012965 vs. SwissProt
BLAST of EMLSAG00000012965 vs. Select Arthropod Genomes
BLAST of EMLSAG00000012965 vs. nr
BLAST of EMLSAG00000012965 vs. Tigriopus kingsejongenis genes

BLAST of EMLSAG00000012965 vs. GO
Analysis Date: 2014-04-02 (Blast vs. GO)
Total hits: 25


Match Name	E-value	Identity	Description
-	3.777e-6	36.73	symbol:VDR "Vitamin D3 receptor" species:9913 "Bos...	[more]
-	3.785e-6	36.73	symbol:VDR "Vitamin D3 receptor" species:9913 "Bos...	[more]
-	3.978e-6	43.14	symbol:RXRB "cDNA FLJ50538, highly similar to Reti...	[more]
-	4.168e-6	37.04	symbol:RXRA "Uncharacterized protein" species:9913...	[more]
-	4.313e-6	45.65	symbol:RXRG "Uncharacterized protein" species:9615...	[more]
-	4.329e-6	36.73	symbol:VDR "Vitamin D3 receptor" species:9031 "Gal...	[more]
-	4.375e-6	43.14	symbol:RXRB "Retinoic acid receptor RXR-beta" spec...	[more]
-	4.417e-6	36.73	symbol:VDR "Vitamin D3 receptor" species:9606 "Hom...	[more]
-	4.427e-6	45.65	symbol:RXRG "Retinoic acid receptor RXR-gamma" spe...	[more]
-	4.505e-6	45.65	symbol:RXRG "Retinoic acid receptor RXR-gamma" spe...	[more]

Pages

BLAST of EMLSAG00000012965 vs. C. finmarchicus
Analysis Date: 2014-05-09 (TblastN vs C. finmarchicus TSA)
Total hits: 25


Match Name	E-value	Identity	Description
gi\|592876291\|gb\|GAXK01081286.1\|	6.289e-24	30.99	TSA: Calanus finmarchicus comp1041760_c0_seq1 tran...	[more]
gi\|592835469\|gb\|GAXK01122075.1\|	1.459e-23	28.00	TSA: Calanus finmarchicus comp107343_c0_seq1 trans...	[more]
gi\|592782594\|gb\|GAXK01171974.1\|	3.402e-20	26.42	TSA: Calanus finmarchicus comp62776_c0_seq1 transc...	[more]
gi\|592850976\|gb\|GAXK01106568.1\|	6.464e-17	24.29	TSA: Calanus finmarchicus comp119035_c1_seq5 trans...	[more]
gi\|592850977\|gb\|GAXK01106567.1\|	7.289e-17	24.29	TSA: Calanus finmarchicus comp119035_c1_seq4 trans...	[more]
gi\|592850985\|gb\|GAXK01106559.1\|	7.429e-17	24.29	TSA: Calanus finmarchicus comp119035_c0_seq1 trans...	[more]
gi\|592850978\|gb\|GAXK01106566.1\|	7.449e-17	24.29	TSA: Calanus finmarchicus comp119035_c1_seq3 trans...	[more]
gi\|592850979\|gb\|GAXK01106565.1\|	7.611e-17	24.29	TSA: Calanus finmarchicus comp119035_c1_seq2 trans...	[more]
gi\|592850980\|gb\|GAXK01106564.1\|	7.926e-17	24.29	TSA: Calanus finmarchicus comp119035_c1_seq1 trans...	[more]
gi\|592857768\|gb\|GAXK01099794.1\|	5.477e-11	22.83	TSA: Calanus finmarchicus comp253537_c2_seq2 trans...	[more]

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BLAST of EMLSAG00000012965 vs. L. salmonis peptides
Analysis Date: 2014-05-10 (Blastp vs. self)
Total hits: 8


Match Name	E-value	Identity	Description
EMLSAP00000012965	0.000e+0	100.00	pep:novel supercontig:LSalAtl2s:LSalAtl2s98:122462...	[more]
EMLSAP00000008261	4.521e-40	35.83	pep:novel supercontig:LSalAtl2s:LSalAtl2s49:858199...	[more]
EMLSAP00000012964	6.157e-18	89.74	pep:novel supercontig:LSalAtl2s:LSalAtl2s98:120410...	[more]
EMLSAP00000012651	5.211e-10	25.85	pep:novel supercontig:LSalAtl2s:LSalAtl2s959:3535:...	[more]
EMLSAP00000011907	8.948e-9	31.82	pep:novel supercontig:LSalAtl2s:LSalAtl2s83:639505...	[more]
EMLSAP00000010267	1.595e-8	29.73	pep:novel supercontig:LSalAtl2s:LSalAtl2s680:11040...	[more]
EMLSAP00000004174	7.136e-8	50.00	pep:novel supercontig:LSalAtl2s:LSalAtl2s220:36973...	[more]
EMLSAP00000001919	3.407e-7	40.43	pep:novel supercontig:LSalAtl2s:LSalAtl2s132:61643...	[more]

BLAST of EMLSAG00000012965 vs. SwissProt
Analysis Date: 2017-02-10 (Blastp vs. SwissProt)
Total hits: 7


Match Name	E-value	Identity	Description
gi\|2500907\|sp\|Q24143.1\|HR96_DROME	2.787e-7	47.17	RecName: Full=Nuclear hormone receptor HR96; Short...	[more]
gi\|74902124\|sp\|Q5I7G2.1\|RXR_LYMST	3.183e-7	42.59	RecName: Full=Retinoic acid receptor RXR; AltName:...	[more]
gi\|75017953\|sp\|Q8T5C6.1\|RXR_BIOGL	3.443e-7	42.59	RecName: Full=Retinoic acid receptor RXR; AltName:...	[more]
gi\|190411624\|sp\|Q1L673.2\|VDRB_DANRE	4.769e-7	36.11	RecName: Full=Vitamin D3 receptor B; Short=VDR-B; ...	[more]
gi\|52783388\|sp\|Q7SYN5.1\|RXRBA_DANRE	6.451e-7	41.51	RecName: Full=Retinoic acid receptor RXR-beta-A; A...	[more]
gi\|147732610\|sp\|A2T929.2\|RXRAA_DANRE	6.486e-7	40.74	RecName: Full=Retinoic acid receptor RXR-alpha-A; ...	[more]
gi\|114152848\|sp\|Q94407.3\|NHR48_CAEEL	7.790e-7	44.44	RecName: Full=Nuclear hormone receptor family memb...	[more]

BLAST of EMLSAG00000012965 vs. Select Arthropod Genomes
Analysis Date: 2017-02-20 (Blastp vs. Selected Arthropods)
Total hits: 7


Match Name	E-value	Identity	Description
EFX79885.1	4.473e-10	40.48	hypothetical protein DAPPUDRAFT_304351 [Daphnia pu...	[more]
gb\|KFM66780.1\|	3.871e-8	24.58	Vitamin D3 receptor B, partial [Stegodyphus mimosa...	[more]
gb\|KFM75069.1\|	8.710e-8	52.38	Nuclear hormone receptor HR96, partial [Stegodyphu...	[more]
gb\|EEC00893.1\|	9.082e-8	47.62	retinoid X receptor, putative, partial [Ixodes sca...	[more]
EEB17317.1	1.036e-7	45.45	nuclear receptor nhr-48, putative [Pediculus human...	[more]
AAF56379.1	1.351e-7	47.17	hormone receptor-like in 96 [Drosophila melanogast...	[more]
EAA08573.6	3.489e-7	50.00	AGAP004224-PA [Anopheles gambiae str. PEST]	[more]

BLAST of EMLSAG00000012965 vs. nr
Analysis Date: 2017-02-20 (Blastp vs. NR (2/2017))
Total hits: 5


Match Name	E-value	Identity	Description
gi\|657600354\|gb\|AID52838.1\|	8.064e-53	40.65	nuclear receptor [Tigriopus japonicus]	[more]
gi\|657600364\|gb\|AID52843.1\|	2.333e-25	26.41	nuclear receptor [Tigriopus japonicus]	[more]
gi\|321468902\|gb\|EFX79885.1\|	2.188e-7	40.48	hypothetical protein DAPPUDRAFT_304351 [Daphnia pu...	[more]
gi\|358342639\|dbj\|GAA50061.1\|	5.330e-7	29.14	nuclear receptor subfamily 1 group I [Clonorchis s...	[more]
gi\|657600360\|gb\|AID52841.1\|	6.003e-7	57.45	nuclear receptor [Tigriopus japonicus]	[more]

BLAST of EMLSAG00000012965 vs. Tigriopus kingsejongenis genes
Analysis Date: 2018-04-18 (Blastp vs. Tigriopus kingsejongensis proteins)
Total hits: 12


Match Name	E-value	Identity	Description
snap_masked-scaffold2498_size15023-processed-gene-0.1	6.114e-59	41.56	protein:Tk12056 transcript:snap_masked-scaffold249...	[more]
snap_masked-scaffold1268_size51707-processed-gene-0.2	6.114e-59	41.56	protein:Tk07212 transcript:snap_masked-scaffold126...	[more]
maker-scaffold323_size206388-snap-gene-1.16	3.797e-36	28.74	protein:Tk12478 transcript:maker-scaffold323_size2...	[more]
maker-scaffold187_size272365-snap-gene-0.15	3.331e-17	27.49	protein:Tk10312 transcript:maker-scaffold187_size2...	[more]
maker-scaffold267_size230776-snap-gene-1.25	6.643e-11	55.10	protein:Tk02974 transcript:maker-scaffold267_size2...	[more]
maker-scaffold188_size271682-snap-gene-1.24	1.627e-9	22.36	protein:Tk00140 transcript:maker-scaffold188_size2...	[more]
maker-scaffold48_size466083-snap-gene-1.23	1.460e-8	35.37	protein:Tk05971 transcript:maker-scaffold48_size46...	[more]
snap_masked-scaffold28_size608977-processed-gene-1.5	2.070e-8	47.73	protein:Tk05738 transcript:snap_masked-scaffold28_...	[more]
snap_masked-scaffold58_size443543-processed-gene-3.1	3.078e-8	65.52	protein:Tk00704 transcript:snap_masked-scaffold58_...	[more]
maker-scaffold92_size382268-snap-gene-1.23	9.657e-8	46.00	protein:Tk08749 transcript:maker-scaffold92_size38...	[more]

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Alignments

The following features are aligned


Aligned Feature	Feature Type	Alignment Location
LSalAtl2s98	supercontig	LSalAtl2s98:1224628..1226761 +

Analyses

This gene is derived from or has results from the following analyses


Analysis Name	Date Performed
ensembl	2013-09-26 .965016
Blast vs. GO	2014-04-02
TblastN vs C. finmarchicus TSA	2014-05-09
Blastp vs. self	2014-05-10
Blastp vs. SwissProt	2017-02-10
Blastp vs. Selected Arthropods	2017-02-20
Blastp vs. NR (2/2017)	2017-02-20
Blastp vs. Tigriopus kingsejongensis proteins	2018-04-18

Properties


Property Name	Value
Logic name	ensemblgenomes
Description	snap_masked-LSalAtl2s98-processed-gene-12.8
Biotype	protein_coding
Evidence	IEA
Note	Nuclear hormone receptor HR96

Cross References

External references for this gene


Database	Accession
Ensembl Metazoa (gene)	EMLSAG00000012965 (primary cross-reference)

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Species	Type
EMLSAT00000012965	EMLSAT00000012965-708812	Lepeophtheirus salmonis	mRNA

Sequences

The following sequences are available for this feature:

gene from alignment at LSalAtl2s98:1224628..1226761+

gene from alignment at LSalAtl2s98:1224628..1226761+

Legend: mRNA

Hold the cursor over a type above to highlight its positions in the sequence below.

>EMLSAG00000012965-695731 ID=EMLSAG00000012965-695731|Name=EMLSAG00000012965|organism=Lepeophtheirus salmonis|type=gene|length=2134bp|location=Sequence derived from alignment at LSalAtl2s98:1224628..1226761+ (Lepeophtheirus salmonis)
ATGTTAACAAGAAAACAATCGAATCAGTTATCATGGGCACATTTACAGTC
TGAAGAAATCTCTAAAAGTGTTGATGATGTGAGCAAAACCATTGATTTAT
CAGAAAAACATGAAATCCTTCCAAATTACCCTTCTGCTAAAACCCATTAC
AACAACTTGGATTTGCTACCGGATAATCCTGCTCCTAAAAGGAAAAGACC
AAAATTCATTCGAAGGGTCAAATGTCAAGTCTGTTATGATTTAGCAAATG
ATCATATTCACTATGGGGCTATTTCCTGCTACTCTTGCCGNNNNTGCTTT
CTTCCGAAGGGCAGTTAATAGCAATGCTGATTACTTTTGTTCACAGAATA
AAAACTGCGTCGTTACAAAGCATACGAGGAAACATTGTCAGTACTGCAGA
TTTGTGAAATGTCTCTCTGTGGGGATGAAGAGCTCTTGGGTTATGACTGA
AGAGGACAAGAAAGAGAAGAAGGAAAAAGCCTTTATCAAGAAAGTTAAAC
TAAAGACTTGTCAACTCCATCGGGTTTCCACAAAATCCAAGAAATCACAG
CAATCCTTTAATAAGCATACTAATAGTATAAAGAAGGAAGACAATAATGG
GACGACGTCCTCCTCATCCCTTCGAGTTCCTACCCTTTCCGAGCATATTA
TTCCTCCACGAATAGATCCTAGTTGTCTTTCAAGTTCCCTATTGTCGTCT
CACGAAAATCCTGCTCAACAAAGTTTCACTTTTTCCTCTGCATCTTCTCC
ATATTCGAGCATGAATAGAAGTTTATCGTGTTCTCCAATTACGATGTCTA
ATAATACTGATGCATTATTGTCTACTCATCATTCACCCAGGGAACACTCA
GAGTTCCCAGGTTCACCCATAGTGGGGACATTATCATATGGCCAATCAAT
GAACTCTTCCCCTATTTATAAATATTTAAATACCATTTGGTCATCCTCTT
TGCAAAATCATTTGTATAATAATGGTAGGAGTAATGAGCTTTCTCCTCCT
TCCAAGCAATCCCACATCTCAAATACCTATGCACTTAATCCGGAGATAAG
CATGAGTAATCAATCCTATTATAATTTCAATTCCACTCTTAGACAAAAAG
ATCCCTTGGAACCTCCTTCTATATCGCAAAGCAATTATTCTCCAAAGAAT
AATCACGGAGAATTATTTTCTTATTCTCCTCTGAGTGGTAAGTCCTCTCC
TCAACCAGCAAAGACAGAAAAAATACCTCCTTCTCTGTGTAAGAAGTTCA
TGGATAATGAAACTCTACCTGAGTTACTCGTTAACTCCAATTTCCCAATT
GATCTCAGTCAAAAATATACCTCTGTTGTTGACAGTTGCAATTATAAAAT
TCATCCCTCGGAGATTCTTACTAATTTATCAACCGTAAGTAAATATGAGA
CTGGTATTCCAAAAAACCTTAAAAATGCTGGTTTTTCGGATTACGAGTGC
AATCTCATAAGTAATATAATGATAAGTGAAGAAGAGTCCTCAAAACTCAT
TCCCCTCAGGTCTGAAACAATGGCTAMCATGATCAATTGTTCCTACTCAA
ATAAAACTTTTCCTCAAGACGTTTGCCTGGAGGGATATCTTGTATGCATG
AGGAGAATCATTCAACTTTCATCAATGTTGGACTTCTTCACTTGCTTTAG
TATGGAAGACCAAAAGGCTCTTCTACTTACTAACACAGATATGATTGTCA
ATATTAGAACTGCACGGTTTTTTCAGCATGGAGTTCATTTTAAAAAACAT
ATCTTCTTTGTAAATAATACCGACGATGATCCAAAGTATGGAAGGATGGA
CACCTTCCAGATATTTCAATCACCCTGGGCCTGTAGCGACGAAGATGAGA
AAAAGTACAATGATTTAATGAAGAAGATTTTTGATCTTCAGCTCGACGAA
ATCTCAACTGTCCTCATATCCATGATGTCTCTCTTTTCCTCTACTAATGC
AAAAATTCACGATGAACTCCGAGCAAACAAAACACAAGAGTTCTTTACAA
ATCTTATGAAGAAATATATTATACATCATGTGGGTAAGGACGCGGCGTGT
CAACTCTTACCCAAATACATATTTATGATAGCACATCTCGAAGAAATGGC
TCAAGTTATGGTTARTAAACGACTTAATATCTAG

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