|
Associated RNAi Experiments
Alignments
The following features are aligned
Aligned Feature | Feature Type | Alignment Location |
LSalAtl2s151 | supercontig | LSalAtl2s151:403390..412004 - |
Analyses
This mRNA is derived from or has results from the following analyses
Analysis Name | Date Performed |
ensembl | 2013-09-26 .965016 |
Properties
Property Name | Value |
Logic name | ensemblgenomes |
Biotype | protein_coding |
Evidence | IEA |
Cross References
External references for this mRNA
Relationships
This mRNA is a part of the following gene feature(s):
The following exon feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of EMLSAP00000002599 >EMLSAP00000002599 ID=EMLSAP00000002599|Name=EMLSAP00000002599|organism=Lepeophtheirus salmonis|type=polypeptide|length=1576bp
MSKSSKAEKPFSEKLKQWFKGTKSNLYPHGEEIRLSGELVDSISPSISPL QERLKILKDLKESVRNGRLQDKGVEVLLYKTKDLLRNDSPDVRHIVLSFY ESLVYGQYSRLGLVRSAFFNIIKENHSKRGSADFTYHIDLLYVLTGKGKD IVYFEDELGPFIKETIPFITPQLPCTLKFLEMITNCFIFNATYLDSDVVL ALITLISSLCTSTNDKNETKSCLEVLNSIICYSYIPKNGLLLFISILCRV VNLEAYGKDAWDITRRLMGTHLGHSALYCLSMIVQTTENRSDVALIRGAI FFIGFSLWGHNRIKSLDYSAVTILPTFVHALKCKHHLVVFEVIQQVKQLV TFYDKELHAAACDAIVELIELLLIEVRRLEKKLQDNISSHLHAVITILEG LSEMKRYSGSKQKLFGMLDLCADHRPEESVIRLITFRQKSIHAAKSKWLN IFSELVERYYKKEKRVNIRIKTLDVILDIFKSNHYSFEEELIDRIIIPFL GSVHMEPESRIRRRAIEVLTTLCSLCQTNKNLDLLNILGCIMKRSLEQEA ERDSLLKDLLIVVAEDESYHLGLEESDGSXXFSPYIICRSPEEEEEAELL WNRQQESASRPSSPSCLSGTRQKSVLCVSLNKACLLVIECLERETDWNVL CLVLTRVPTVLQNRPLICRYGKSINKFITPLVSFTDKNSNFPLHLTNTPS KFSKSDFHNHIFPVLAALASYNEFLVPASQSSLIRALELGLLSKECNRMC IVALTTSALEMKRSTRNLIPEVLLNFSKISATKFISTPILEFLSTMVRLP EVFSCFTDTNYITVFAIALPFTNPFKFDPYTVSLAHHVIVMWFLKCRLSY RQNFVQFIITSLNSNIFVPFEENDKNKDSMGRMRSTSLSAARRPNVALAA KKDVAADVPKXTQIHPLAFHQELTETCLDILARYMYGNVSVKTRRLKTSD FILKNGHSATWLIGTMLITVSTSCCTHIAMRNGVCDRCYFYCIRDGTLSK DDITKNSDRRRHMSDFYSGTNKSQLSNLRSDKELHRHTSLERMESSGDDY RVKKVLPETCSCWCSGWAEIYIRRPSGDVSWMCRVQNTQLLSAHTPSTNL RELTALFDTSLKKDTFNFDVSTESDKINVDNLTEDEYKKLSSEFVPSSVS SPSAETDKTVSGNRSHDEEMIVMSPKSPVKKTKSSPPDTSCQPLEVSDIK RKKNQNNIPLNSSPNSSFESNLNEPAMRTTRSHTISVSSPRNRVLNKPLQ PTTGIVGRPGIGGIGSGEKNDKVSGISPQFVFLMLYQSSTFGNAASLEKP LLLPSNKITENSIKNLDRIPAHETHKIGVLYIGPNQVNDEVGILRNISGS SRYTDFLDGLGNLINIRNIDKSTHFIGGLDXEEGDGNFAYMWXDDVMQXI FHVATLMPNHDNDPQANKKKRHIGNNYXAIVYNDSRNHSESYKMGTVRGK FISACIVITPLDQGSNRVCVDCKPELKEPLGHVMSLSILVRQWALHCNLA AQIQKSLSNKMPYSSNWLZXLRAIKRLKEKLQKENEMKEEEDREQGSGRP QLNDFTEFVIMRKKKGNGGSGNSVGD back to topmRNA from alignment at LSalAtl2s151:403390..412004- Legend: polypeptideexon Hold the cursor over a type above to highlight its positions in the sequence below. >EMLSAT00000002599-698446 ID=EMLSAT00000002599-698446|Name=EMLSAT00000002599|organism=Lepeophtheirus salmonis|type=mRNA|length=8615bp|location=Sequence derived from alignment at LSalAtl2s151:403390..412004- (Lepeophtheirus salmonis) ATGTCCAAGTCCAGCAAAGCCGAGAAACCTTTCTCAGAGAAACTTAAACA
ATGGTTCAAGTAAGAATATGCTTGGATTGATATTATTATTTAAGTTCCAT
CATCATCATCATTTTCTTTTGACTTTAAAGGGGCACGAAATCCAATTTAT
ATCCACATGGAGAGGAAATCCGCCTTAGTGGAGAGCTGGTCGACTCTATT
TCCCCTTCCATATCCCCACTCCAGGAACGTTTAAAGATCCTTAAAGACCT
GAAGGAAAGCGTGAGGAATGGGCGACTTCAAGACAAAGGAGTTGAGGTCC
TTCTCTACAAAACAAAGGATTTACTGCGAAATGATTCCCCTGACGTACGT
CATATTGTGCTATCCTTTTATGAATCCCTTGTCTATGGGCAATACTCTCG
TTTGGGCCTAGTTCGATCCGCATTCTTCAATATCATCAAGGAAAATCATT
CAAAGAGAGGGAGTGCGGACTTTACATATCATATCGATCTATTGTACGTA
CTAACAGGGAAAGGGAAGGACATTGTGTATTTCGAAGATGAGTTGGGCCC
ATTTATCAAGGAAACGATTCCCTTTATTACGCCGCAATTACCCTGTACTC
TGAAATTCTTGGAGATGATTACAAATTGTTTTATATTCAACGCAACCTAT
CTGGATTCGGATGTTGTTTTAGCACTTATTACATTAATAAGTAGTCTTTG
CACGTCTACGAATGATAAAAATGAAACCAAATCCTGTCTTGAAGTAAGGA
CCACCCTTTTAAAATCTCCTTTATCATAGTCAACACTTTTGAATTTCAGG
TTTTGAATTCCATCATTTGCTACAGTTACATCCCCAAAAATGGACTCTTA
CTCTTCATTAGCATACTTTGTCGAGTTGTAAATTTAGAAGCGTATGGAAA
GGATGCTTGGGACATTACTCGTCGTTTAATGGGTACACATCTGGGTCACT
CAGCCTTGTATTGTTTGAGCATGATTGTTCAAACTACTGAGAATCGTAGT
GATGTTGCTCTTATACGTGGAGCAATATTCTTTATTGGATTTAGTTTGTG
GGGACACAATCGAATCAAATCTTTGGATTATTCCGCTGTCACCATCTTAC
CTACCTTTGTACATGCTCTTAAATGTAAGCATCATTTGGTTGTTTTTGAA
GTGATTCAGCAGGTAATATATATATTATAAGTAATTGACTTGAACATGAT
CCAACAATAATCATTTTCATGGCAATTTACAGGTCAAACAATTAGTCACG
TTCTATGATAAAGAACTTCATGCCGCCGCTTGTGATGCCATTGTCGAACT
CATTGAACTGCTTCTCATTGAAGTTCGTCGATTGGAAAAAAAACTTCAGG
ACAACATATCCTCACATTTGCATGCAGTTATCACCATATTAGAGGGTCTA
TCAGAAATGAAAAGGTATGATGCCTTTAAAGAAGAAAATATATAACATTT
TAGGGATTTTTATTTAATCATATATTGCTTATAGATATAGTGGAAGCAAA
CAAAAGTTGTTTGGAATGCTGGACTTGTGTGCTGATCACCGCCCTGAAGA
ATCTGTAATCAGGTTAATAACTTTCCGTCAGAAATCAATACATGCAGCAA
AGTCTAAATGGCTTAACATCTTTTCTGAGCTTGTGGAGCGCTATTACAAA
AAGGAGAAACGTGTTAACATTCGAATCAAAACTTTAGATGTGATTTTGGA
TATTTTCAAGTCTAATCATTATTCATTTGAAGAGGAACTAATAGATAGAA
TAATTATTCCCTTCTTGGGTAGTGTTCATATGGAACCTGAATCTCGAATA
AGAAGAAGGGCTATTGAAGTTTTAACTACTTTATGTTCCCTTTGTCAAAC
CAACAAGAATTTAGATCTTTTGAATATCCTGGGTTGTATAATGAAAAGAT
CCTTAGAACAAGAAGCTGAAAGAGATTCGCTATTGAAAGATTTACTCATC
GTTGTGTATGGTTTAATTAATGTATTTAAGGACAAATTGCGCCAGCTACC
AAGTACTTTTATACTGAGAGTTTTAAGTTTATTAACAACGCATTTGGAGT
ATCACTATGATCACCCTAACATATTTGGTGGAAAGTCGGATATACGATAT
GTAATATTTCGCTTATTTTTNNNNCTTAAGAGCTGAAGATGAGAGTTATC
ATTTGGGATTGGAAGAAAGTGATGGCTCGGKGKATTTTAGTCCTTATATT
ATATGCCGTAGTCCTGAAGAAGAGGAGGAAGCGGAGTTGTTGTGGAATAG
ACAACAGGAAAGTGCTAGTCGTCCATCCTCTCCTTCTTGTTTATCTGGAA
CAAGGCAAAAGAGCGTTTTATGTGTATCTTTGAATAAGGCCTGTTTGTTA
GTGATAGAGTGTTTGGAAAGGGAAACTGATTGGAACGTTCTATGTCTCGT
TCTTACCCGAGTTCCTACAGTGTTGCAAAATAGACCTCTGATATGTCGTT
ATGGCAAAAGTATCAATAAATTTATCACACCACTCGTCTCTTTCACGGAT
AAAAACTCAAACTTTCCCCTCCATCTGACTAATACTCCTAGTAAGTTCAG
CAAATCCGATTTTCATAACCATATATTCCCTGTGCTGGCAGCTTTAGCCT
CTTATAATGAATTCCTTGTCCCTGCATCACAAAGCTCTCTTATAAGAGCA
TTGGAGTTAGGCTTATTATCCAAAGAATGCAATCGAATGTGTATTGTTGC
CCTCACTACATCAGCCCTCGAAATGAAACGCTCAACGCGCAACCTTATAC
CAGAAGTTTTATTAAACTTTTCCAAGATATCTGCAACAAAGTTTATTTCA
ACACCCATTCTAGAGTTTTTATCAACAATGGTTCGATTACCCGAAGTCTT
CAGTTGTTTTACTGATACAAACTATATAACTGTCTTTGCTATTGCTCTTC
CTTTCACGAATCCCTTTAAGTTTGATCCCTATACAGTTTCACTGGCTCAC
CATGTTATAGTGATGTGGTTTTTGAAGTGTAGACTCTCATATAGACAGAA
CTTTGTTCAATTTATTATCACAAGTCTTAATTCAAACATATTCGTACCTT
TTGAAGAAAATGATAAAAATAAGGATTCCATGGGACGGATGCGGAGTACG
AGCTTATCAGCTGCTCGGAGGCCAAATGTGGCTCTTGCAGCTAAAAAGGA
TGTTGCAGCTGATGTTCCAAAAYCCACTCAAATCCATCCATTAGCTTTTC
ATCAGGAACTGACAGAAACGTGTCTCGATATTCTGGCTCGATACATGTAC
GGCAATGTCTCAGTAAAGACCCGTCGCCTAAAAACATCGGATTTTATTCT
TAAAAATGGGCATTCAGCGACTTGGTTGATTGGCACAATGCTTATAACTG
TTTCTACGAGCTGTTGTACCCATATTGCAATGAGAAATGGTGTATGTGAT
AGATGTTATTTTTATTGCATTCGAGATGGAACTTTAAGTAAGGATGATAT
TACTAAAAATTCGGATAGAAGAAGACACATGTCGGATTTTTACGTAAAGC
ACTTTATTTTTTATTTTTGTATTTAATAATTATTTATTTTCATTACAGTC
CGGTACAAATAAGAGTCAGTTATCAAACTTAAGAAGTGATAAGGAACTTC
ATAGGCACACTTCTCTGGAGAGAATGGAGTCTTCTGGAGATGATTATAGA
GTAAAAAAAGTGCTACCTGAAACATGCAGTTGTTGGTGCTCTGGCTGGGC
TGAAGTAATACAACCCCATGTGTACACTACCACATATTTTGCTCATGAAT
TTAATTTCAGATTTACATTCGGCGTCCAAGTGGGGATGTATCCTGGATGT
GTAGAGTGCAAAATACTCAGTTGCTTAGTGCGCATACACCCTCAACTAAT
TTGAGAGAATTGACAGCACTCTTTGATACCTCTTTGAAAAAGGATACATT
CAACTTTGATGTGTCGACTGAAAGTGATAAGATTAATGTGGATAATTTAA
CGGAAGACGAATATAAGAAGTTAAGCTCGGAATTCGTACCCTCTTCAGTT
TCCTCTGTATGCTTAATTCACCTATGTTTGATCTTTGTATGGAATCTTTA
TTAATATATATTTGTAATTATTCTAGCCTTCTGCAGAGACGGATAAAACA
GTTTCGGGGAATAGGTCGCACGATGAGGAAATGATCGTTATGTCACCTAA
ATCTCCAGTTAAAAAGACAAAATCTTCACCTCCTGACACATCATGTCAAC
CCCTAGAAGTCTCAGATATTAAAAGAAAGAGTTGTGATCCTATACCAGAG
GTTGAAGAGGATTTACGCTCCGGAACCGATTTAAGGCGTCGACAATCTGT
ACGTAGATACAACATTAATTCTTATATAAATATTAGAGTTGGATTCGAGT
TAAAATTATCGAGTTCAAGATTTCGATGATTGAAGTAGAGTGAGGTTCAA
GTAAATTGATGATACTCATATTTTATTTCGAGTTCACTATCAAGAAATGA
AATAAATAAGATATGTTAGGTTGTTTATTAATTGGATATATACATATTTC
ATATAATACCACTACTGATAATTATTGAATTCTATACAGTTAAATATTAT
ATTAGGTTACCATGACGTAGTAATTAATCCTGTCTCTCTTCTTAGAAACT
ATTTCCCAGTTAAATGGCTAACTTAAATAGGTTAGAAAATACGAATTTTC
CTTCAGTGCTCCAATACTTAAGTGGGTCTTTATATCGATCGATACAGGGC
AATTCTAAATATTGATTCTTAAATAAACATAACGTTTATAACATAAAAAT
ATTATGTGGCCCATGGCCTGCGCAGTTAAAAATGTCAGTTATATACTATA
AGAGTCTGGCGGCCTTAGAGCGAGTTACAATTAGTTTGAATAATTACATA
AAAAATATTTGAAAATTTGTATTCCGCAGGAATAATGAAATACTCCTTGA
TATTGAAAATAAATAACCGGATATTTAATTAGTGATTATTCGAGACTCAT
ATAAATATTTTGAGTTTCCGTGGCTCCAAGTCAAACTATATCGAGTTTTT
TCAAAAGATTTTTTGACGAGTTCGAGTAATTTACAAAAAAAAAAATAATA
AAAGAAATGACGTAACTTATGTCGAGTATTTTTCGAGTTTTAGTTATAAT
CGAATCCAACTCTAATAAATATATTATTCTGGCTCTTAAATTATTATTCT
TCGAAATTTTTGAGGAACATGGTCCAAAAATGTTGGTTTGAATAAAAAAA
TGAAGAAATATACGAAAGTTTTAATCATAATAAACCTTGTTTAGAAGATG
TGCAGGCCACTTCTAAAAAAACAAAAAAAACATAGAATTCTGAACTGAAA
ATAGTCCACATAAGTCGAAATAGAGCAATATATAATCAATGTGAGAAATT
AAATAAGGGTACCGGTATTAATTTCAAATTTCAATGCCGAATGGATATAC
AAAATTAAATGAGTTAACAAACTTTCAAAAGCTATAATGTTATATCATTA
TGTCGACTATTTTCAGGTGATAATTCTATTTTTTTCTATTTAATCGTATG
TTAACCGTAAAGAACTGTTGGACCATGTTCCCTGAACATTTCAAAAATAA
ATAAATAATAATAATTTAAGAAACAGTCTAATATAAACATATATTTTCAT
ACTAAAACTATAGGATGCATGGAGAAAATCCTTACCACCGGGTAATGAAG
AAAATCAAAATAATATCCCATTGAATAGCTCTCCCAATTCTTCATTTGAA
AGTAATTTAAATGAACCTGCAATGAGAACAACGCGCTCTCATACTATATC
CGTATCGAGTCCGCGGAATCGGGTATTAAACAAACCTTTGCAACCTACCA
CAGGAATAGTCGGTCGTCCTGGAATTGGTGGCATTGGATCTGGAGAAAAG
AATGATAAAGTTTCTGGCATTTCACCGCAATTTGTATTTCTTATGCTTTA
TCAATCTTCCACATTTGGAAATGCTGCTTCCCTAGAAAAACCTCTTTTAC
TTCCCTCAAATAAAATTACTGAGAATAGTATTAAAAATCTTGATAGGATC
CCGGCGTAAGTAAAGTTTTCTCTATTCTAGATGCATTTAAAAAGTTTAGA
CGAATGTTAATTATGAATAGGAATATTTTTTTTGGGATTAAGGGGTTGAT
AGTAAATTTAAAGGTTGAATAGTCATGATTGGATTACTAAACAGGATTGT
CTTTTGGACACTAAGGAAAAGGACAATAAAGTTTTAGTGTATTTTTCTAT
ACCAGGGGTCACGAAATGGCTCAGTGCATATTGGATTCAAAAAGAATATG
CGCGCCATTTGCATATCCCAAAAAAGTACCTATAACTTGTTATGTCTTTT
TGATAATGAATCGTTGATTTAGGGGTATACTTCTTATAATATTACTTAAA
GATCAAACACTCAACTGCAGTATTTATTTCATCATAAGTGCTGTATCGTT
ATGTATTTTGTAGATTAAAAGGAATTATGCCAACAATCCGTAAATATGGA
AACTTTAGGATCGATGTGCCACCTCTAAATATTTATTGATCGAGTTCAAA
TTTTGTAAAACATACATATTTTATTATCAAAAGAAACAATTTGCCGCTTT
GGGAGCACTCTTTTTCCAGAAAAATTTGTTAAAAAACCCTCTAATACAAT
ATTTTTTATTAATCTTCTGTTTCAATATGTAGTCTTGATCCAATGGACAA
TGTCCATTAGATGGGGCCAGAGGCGCGAATATTCTTTTCAAACTAGGAGA
GAACCACTACTAATATAGGGGGGGGGCTGAAGGGGTTGTAGCGCCTCCAA
ATCGAGGAATTTAAAAAAAATTATAAATATAGAAGAAAAATTAGCTCCCA
AAAAAATCAATTTAAGAATTCATTTTCTAAAAAAAAAATACGGGAGTTTT
TTTTAGGATTTCTTTTATAAAAAGAAGGTTATTAGATCAAATTATGCTGT
GAAATTAAGCACCCCTTAAAAAATATAATCCGGCGGACGCCCCTGACTTG
TTATTCTTTCAATTATCCGGCCCATTATAGAAAAAGAATAGGTTACTCCT
ATTCTAAACTATGTATTAATGTATACGAATCAACTCATTTTTGGAGCCGT
GCCACTAACATGGCTGGAGCCTGTCTCTTGATACTCTACTTTTTCCGGCT
TTTGTTTTTGTTGTTGACCCTAGGAAATTAAGAGAAGGATCCACCAGGGT
ATCGCTCCCAAGGAGCCTATCCCAATTGTATATCTACAAAGCGACGTGAA
ATAATTATTGATTTTTATTATATTAATTAGTCACGAAACTCACAAGATTG
GAGTTCTATACATTGGACCTAATCAAGTCAATGACGAAGTTGGAATTTTA
CGCAATATAAGCGGTTCTTCTAGATACACGGATTTTTTGGATGGTCTCGG
AAATCTAATCAATATTAGAAATATTGATAAATCCACTCATTTCATTGGTG
GATTGGATARCGAAGAGGGKGATGGKAACTTTGCTTATATGTGGGRAGAC
GACGTCATGCAGGKCATTTTTCATGTTGCAACTTTAATGCCTAATCATGA
TAACGATCCACAAGCCAATAAAAAGAAAAGGCATATTGGTAATAATTATK
TAGCCATTGTGTACAATGATTCGCGAAATCATAGTGAGTCTTACAAAATG
GGGACTGTGAGGGGGAAATTCATTTCTGCATGTATAGTCATCACTCCTCT
AGATCAAGGCTCCAATAGGGTATGTGTGGATTGCAAACCAGAGCTAAAGG
AACCTTTGGGACATGTCATGGTAAGTTAAAGTCAAATAATTAATTAGTTA
CACAGGTCAAGAAAAAGTTACATTTCCAAAAATCGTTTACGGTCATAGCT
GTATTAAGGGGTCAGGTAAGGGAAACTGAAAAAATGACCGCTTATAGCAG
GTGACTAGTGTTGTGTCGATCCTTATTTAGGAGTGAAGACTGGGTGCAGT
CCAGTTCAGTCCTAAAACTTGCAAAAGTTTGGTCTTTGATGATGTTATTC
AACTTTTTTTGAAATCAGTTCGTGTACTGACAGTCCGAAGGACTAATAGG
AATCGTCCTAAAGACTGGACTGACAACACTACAAGGGGCTTATTTTGTAA
CAATTCTAAATTTGATGACTGTGTATGGCCGCTTAGTGCGGTGACACGCT
TAGAACAGACCAGAATTCTACCTATTAAAATCAAATCCTCTTTTATCAAT
GAAACCCTAAATATTTACACTTTAAATAAGTTCTTTTGGCATAAAACCAA
CTGAAAAACCCAGATGTTATTCCTTTTACAAACAAAATTNNGTACAATTT
GCGTATTCTAGCTGCAACTTGTACACAAAACAACTATTCAAAATGACACA
TTTAATCTTTAGGATCCTAAAATAGTATCTGACAAGAGTTTGTCAATATT
AGTTCGCCAATGGGCTCTTCATTGTAATTTGGCGGCGCAGATTCAAAAAT
CTTTGAGCAATAAAATGCCTTACTCTTCAAACTGGCTCSAAAYACTTCGA
GCTATTAAGCGTTTGAAAGAGAAGCTNCAAAAGGAAAATGAAATGAAGGA
AGAAGAGGATCGTGAACAAGGGTCTGGGCGTCCACAACTGAATGATTTCA
CAGAATTTGTCATTATGCGAAAAAAGAAAGGGAATGGCGGAAGTGGAAAT
AGTGTTGGTGACTAA back to top
|