EMLSAG00000000858, EMLSAG00000000858-683624 (gene) Lepeophtheirus salmonis

Overview
NameEMLSAG00000000858
Unique NameEMLSAG00000000858-683624
Typegene
OrganismLepeophtheirus salmonis (salmon louse)
Associated RNAi Experiments

Nothing found

Homology
[Close]
BLAST of EMLSAG00000000858 vs. C. finmarchicus
Match: gi|592953585|gb|GAXK01004968.1| (TSA: Calanus finmarchicus comp348412_c0_seq1 transcribed RNA sequence)

HSP 1 Score: 79.337 bits (194), Expect = 1.840e-18
Identity = 40/78 (51.28%), Postives = 47/78 (60.26%), Query Frame = 0 
Query:   37 DCNCQCISLQFRDSKGKIHGNCKSTLN-GAQWCYVKYDKYSPCPDLGRSQRFSGRYWSNHACATPSEDSPVCKYVFPP 113
            +C CQC SL FRD  GK+HGNCKS  + GAQWCY+    YS C DL  S +F    WS  ACATP   S  C+ +  P
Sbjct:  146 NCGCQCSSLTFRDEYGKVHGNCKSVDDKGAQWCYISSTHYSSCEDLQLSAKFPNNPWSYTACATPDLSSYECQALSIP 379
[Close]
BLAST of EMLSAG00000000858 vs. C. finmarchicus
Match: gi|592932379|gb|GAXK01026174.1| (TSA: Calanus finmarchicus comp18158_c1_seq4 transcribed RNA sequence)

HSP 1 Score: 75.485 bits (184), Expect = 1.404e-16
Identity = 41/81 (50.62%), Postives = 48/81 (59.26%), Query Frame = 0 
Query:   36 NDCNCQCISLQFRDSKGKIHGNCKSTL-NGAQWCYVKYDKYSPCPDLGRSQRFSGRYWSNHACATPSEDSPVCKYVFPPFV 115
             +C CQC SL FRD+ G + GNCK+    GAQWCYV     S C DL  S+RF    WS  ACATP   S +C  V+PP V
Sbjct:  127 TNCGCQCSSLTFRDTSGTVQGNCKTVDGTGAQWCYVDSSSSS-CQDLVPSERFPHNPWSYEACATPDLGSALCP-VYPPVV 363
[Close]
BLAST of EMLSAG00000000858 vs. C. finmarchicus
Match: gi|592932380|gb|GAXK01026173.1| (TSA: Calanus finmarchicus comp18158_c1_seq3 transcribed RNA sequence)

HSP 1 Score: 73.559 bits (179), Expect = 7.522e-16
Identity = 40/81 (49.38%), Postives = 48/81 (59.26%), Query Frame = 0 
Query:   36 NDCNCQCISLQFRDSKGKIHGNCKSTL-NGAQWCYVKYDKYSPCPDLGRSQRFSGRYWSNHACATPSEDSPVCKYVFPPFV 115
             +C CQC +L FRD+ G + GNCK+    GAQWCYV     S C DL  S+RF    WS  ACATP   S +C  V+PP V
Sbjct:  190 TNCGCQCSNLSFRDTSGIVQGNCKTVDGTGAQWCYVD-SSSSSCQDLVPSERFPHNPWSYEACATPDLGSALCP-VYPPVV 426
[Close]
BLAST of EMLSAG00000000858 vs. C. finmarchicus
Match: gi|592932381|gb|GAXK01026172.1| (TSA: Calanus finmarchicus comp18158_c1_seq2 transcribed RNA sequence)

HSP 1 Score: 73.9442 bits (180), Expect = 1.346e-15
Identity = 42/95 (44.21%), Postives = 52/95 (54.74%), Query Frame = 0 
Query:   36 NDCNCQCISLQFRDSKGKIHGNCKST-LNGAQWCYVKYDKYSPCPDLGRSQRFSGRYWSNHACATPSEDSPVCKYVFPPFVRETAFASSASSKNV 129
             +C CQC SL FRDS   I GNCK+    GAQWCYV    +S C DL  SQRF    WS  ACATP+  S +C   +P +     +   A+  +V
Sbjct:  124 TNCGCQCSSLTFRDSANIIQGNCKTVDSTGAQWCYVD-SSHSSCQDLVPSQRFPHNPWSYEACATPALGSHICPN-YPAYPSHPTYPHPAAPTDV 402
[Close]
BLAST of EMLSAG00000000858 vs. C. finmarchicus
Match: gi|592932382|gb|GAXK01026171.1| (TSA: Calanus finmarchicus comp18158_c1_seq1 transcribed RNA sequence)

HSP 1 Score: 71.2478 bits (173), Expect = 1.305e-14
Identity = 39/95 (41.05%), Postives = 52/95 (54.74%), Query Frame = 0 
Query:   36 NDCNCQCISLQFRDSKGKIHGNCKST-LNGAQWCYVKYDKYSPCPDLGRSQRFSGRYWSNHACATPSEDSPVCKYVFPPFVRETAFASSASSKNV 129
             +C CQC +L FRD+ G + GNCK+    GAQWCYV     S C DL  S+RF    WS  ACATP+  S +C   +P +     +   A+  +V
Sbjct:  190 TNCGCQCSNLSFRDTSGIVQGNCKTVDGTGAQWCYVDSSSSS-CQDLVPSERFPHNPWSYEACATPALGSHICPN-YPAYPSHPTYPHPAAPTDV 468
[Close]
BLAST of EMLSAG00000000858 vs. C. finmarchicus
Match: gi|592932365|gb|GAXK01026188.1| (TSA: Calanus finmarchicus comp18158_c2_seq13 transcribed RNA sequence)

HSP 1 Score: 68.1662 bits (165), Expect = 2.648e-14
Identity = 37/67 (55.22%), Postives = 43/67 (64.18%), Query Frame = 0 
Query:   37 DCNCQCISLQFRDSKGKIHGNCKST-LNGAQWCYVKYDKYSPCPDLG-RSQRFSGRYWSNHACATPS 101
            +C CQC +L FRD  GK HGNCKS+   GA WCYV   + S C DL   S RF G+ WS  ACATP+
Sbjct:    4 NCGCQCSNLTFRDKYGKTHGNCKSSDHTGAVWCYVSPAQTSSCQDLSYTSTRFPGKPWSYEACATPA 204
[Close]
BLAST of EMLSAG00000000858 vs. C. finmarchicus
Match: gi|592932366|gb|GAXK01026187.1| (TSA: Calanus finmarchicus comp18158_c2_seq12 transcribed RNA sequence)

HSP 1 Score: 68.1662 bits (165), Expect = 3.260e-14
Identity = 37/67 (55.22%), Postives = 43/67 (64.18%), Query Frame = 0 
Query:   37 DCNCQCISLQFRDSKGKIHGNCKST-LNGAQWCYVKYDKYSPCPDLG-RSQRFSGRYWSNHACATPS 101
            +C CQC +L FRD  GK HGNCKS+   GA WCYV   + S C DL   S RF G+ WS  ACATP+
Sbjct:    4 NCGCQCSNLTFRDKYGKTHGNCKSSDHTGAVWCYVSPAQTSSCQDLSYTSTRFPGKPWSYEACATPA 204
[Close]
BLAST of EMLSAG00000000858 vs. C. finmarchicus
Match: gi|592906544|gb|GAXK01051831.1| (TSA: Calanus finmarchicus comp28981_c1_seq1 transcribed RNA sequence)

HSP 1 Score: 68.5514 bits (166), Expect = 4.485e-14
Identity = 38/71 (53.52%), Postives = 42/71 (59.15%), Query Frame = 0 
Query:   37 DCNCQCISLQFRDSKGKIHGNCKST-LNGAQWCYVKYDKYSPCPDLGRSQRFSGRYWSNHACATPSEDSPV 106
            +  CQC SL F DS G I GNCKS    GAQWCYV +  +S C DL  S RF    WS  ACATP+   PV
Sbjct:  365 NIGCQCSSLTFIDSSGHIQGNCKSVDHTGAQWCYVDH-LHSSCQDLVHSARFPNNPWSYEACATPAVYQPV 574
[Close]
BLAST of EMLSAG00000000858 vs. C. finmarchicus
Match: gi|592772445|gb|GAXK01182123.1| (TSA: Calanus finmarchicus comp899023_c0_seq1 transcribed RNA sequence)

HSP 1 Score: 68.1662 bits (165), Expect = 7.674e-14
Identity = 35/77 (45.45%), Postives = 47/77 (61.04%), Query Frame = 0 
Query:   37 DCNCQCISLQFRDSKGKIHGNCKSTLN-GAQWCYVKYDKY----SPCPDLGRSQRFSGRYWSNHACATPSEDSPVCK 108
            +C CQC + +  D  G++ GNC S  N GA WCYV+  ++    S C DL RSQRF  ++WS  AC+TPS  S  C+
Sbjct:  104 NCGCQCSNYRVMDRYGELQGNCDSVDNTGAAWCYVEQGEFVKTQSTCQDLKRSQRFPAKFWSYEACSTPSIYSTQCQ 334
[Close]
BLAST of EMLSAG00000000858 vs. C. finmarchicus
Match: gi|592848675|gb|GAXK01108869.1| (TSA: Calanus finmarchicus comp296545_c0_seq2 transcribed RNA sequence)

HSP 1 Score: 67.781 bits (164), Expect = 7.875e-14
Identity = 34/65 (52.31%), Postives = 40/65 (61.54%), Query Frame = 0 
Query:   37 DCNCQCISLQFRDSKGKIHGNCKST-LNGAQWCYVKYDKYSPCPDLGRSQRFSGRYWSNHACATP 100
            +C+CQC SL F+D  G+I GNC S    GA+WCYV    +S C DL  S RF    WS  ACATP
Sbjct:  217 NCDCQCSSLTFQDKYGRIQGNCNSADHTGARWCYVDSAHHSSCQDLHHSARFPQNPWSYEACATP 411
[Close]
BLAST of EMLSAG00000000858 vs. L. salmonis peptides
Match: EMLSAP00000002890 (pep:novel supercontig:LSalAtl2s:LSalAtl2s166:445712:450389:1 gene:EMLSAG00000002890 transcript:EMLSAT00000002890 description:"maker-LSalAtl2s166-augustus-gene-4.9")

HSP 1 Score: 58.151 bits (139), Expect = 9.574e-12
Identity = 37/97 (38.14%), Postives = 47/97 (48.45%), Query Frame = 0 
Query:    5 IKFLLFGAFLMAFAHAQNEQKAAAAAPAPGGNDCNCQCISLQFRDSKGKIHGNC-KSTLNGAQWCYVKYDKYSPCPDLGRSQRFSGRYWSNHACATP 100
            IK  L    +  F    N  +    +P+   N C CQC S  F D KG   GNC  S   G +WCYV Y   + C D   S R++G+ WS  AC+TP
Sbjct:    2 IKIQLIKTLVCMFLSMLNLTQGQLRSPSLYQN-CGCQCNSYTFSDIKGYTQGNCFSSDFTGGRWCYVDYG--NTCHDAVPSLRYNGQ-WSYEACSTP 94
[Close]
BLAST of EMLSAG00000000858 vs. L. salmonis peptides
Match: EMLSAP00000006141 (pep:novel supercontig:LSalAtl2s:LSalAtl2s335:388935:390297:1 gene:EMLSAG00000006141 transcript:EMLSAT00000006141 description:"maker-LSalAtl2s335-snap-gene-4.14")

HSP 1 Score: 54.6842 bits (130), Expect = 2.168e-10
Identity = 33/99 (33.33%), Postives = 49/99 (49.49%), Query Frame = 0 
Query:    7 FLLFGAFLMAFAHAQNEQKAAAAAPAPGGNDCNCQCISLQFRDSKGKIHGNCKST-LNGAQWCYVKYDKYSPCPDLG----RSQRFSGRYWSNHACATP 100
            +L  G  L+  A A  ++       A    +C CQC +  F+D  G+  GNC +   +GA+WCYV   + + C D+     + +R   R  SN ACATP
Sbjct:    2 YLKLGILLVVCACAIAQKNDIILKAASSRTNCGCQCNNYIFKDKYGRTQGNCNTADKSGAKWCYV--SRGNTCNDVTYSSRKDERGQPRRISNEACATP 98
[Close]
BLAST of EMLSAG00000000858 vs. L. salmonis peptides
Match: EMLSAP00000007123 (pep:novel supercontig:LSalAtl2s:LSalAtl2s401:84241:84844:-1 gene:EMLSAG00000007123 transcript:EMLSAT00000007123 description:"maker-LSalAtl2s401-augustus-gene-0.14")

HSP 1 Score: 53.5286 bits (127), Expect = 4.230e-10
Identity = 40/100 (40.00%), Postives = 52/100 (52.00%), Query Frame = 0 
Query:    6 KFLLFGAFLMAFAHAQNEQKAAAAAPAPGGNDCNCQCISLQFRDSKGKIHGNCKST-LNGAQWCYVKYDKYSPCPDL---GRSQRFSGRY-WSNHACATP 100
            KFL+  + ++A   AQ+       AP+   N C CQC +  FRD +G   GNC S    GA+WCYV  D+   C D    GR+ +F  R   S  ACATP
Sbjct:    4 KFLII-SVVVALTSAQD---ITLKAPSLAVN-CGCQCSNYIFRDLRGITQGNCNSADRTGAKWCYV--DRGHTCQDTRGSGRNDQFGRRRQISYEACATP 96
[Close]
BLAST of EMLSAG00000000858 vs. L. salmonis peptides
Match: EMLSAP00000001015 (pep:novel supercontig:LSalAtl2s:LSalAtl2s116:786764:792986:-1 gene:EMLSAG00000001015 transcript:EMLSAT00000001015 description:"maker-LSalAtl2s116-augustus-gene-8.13")

HSP 1 Score: 54.299 bits (129), Expect = 4.874e-10
Identity = 39/101 (38.61%), Postives = 48/101 (47.52%), Query Frame = 0 
Query:    5 IKFLLFGAFLMAFAHAQNEQKAAAAAPAPGGNDCNCQCISLQFRDSKGKIHGNCKST-LNGAQWCYVKYDKYSPCPDLGRSQRFSG----RYWSNHACATP 100
            I  +L  +  +AF  AQ+       AP+   N C CQC +  FRD  G   GNC S    GA+WCYV  ++   C D  RS R       R  S  ACATP
Sbjct:    2 ISKILILSIFVAFGSAQD---ITLKAPSLAVN-CGCQCSNYIFRDGNGITQGNCNSADRTGAKWCYV--ERGHTCQDTRRSXRRDNFGRLRQISYEACATP 96
[Close]
BLAST of EMLSAG00000000858 vs. L. salmonis peptides
Match: EMLSAP00000005421 (pep:novel supercontig:LSalAtl2s:LSalAtl2s292:107272:109821:1 gene:EMLSAG00000005421 transcript:EMLSAT00000005421 description:"maker-LSalAtl2s292-snap-gene-1.3")

HSP 1 Score: 51.9878 bits (123), Expect = 9.204e-10
Identity = 23/48 (47.92%), Postives = 29/48 (60.42%), Query Frame = 0 
Query:   61 TLNGAQWCYVKYDKYSPCPDLGRSQRFSGRYWSNHACATPSEDSPVCK 108
            T    ++CYV  D  SPC DL  S +F G+Y S HAC TP  D+ +CK
Sbjct:   35 TFQEGKFCYVVGDSKSPCVDLKPSTQFMGKYISKHACLTPHLDTFLCK 82
[Close]
BLAST of EMLSAG00000000858 vs. L. salmonis peptides
Match: EMLSAP00000007122 (pep:novel supercontig:LSalAtl2s:LSalAtl2s401:64891:74089:-1 gene:EMLSAG00000007122 transcript:EMLSAT00000007122 description:"maker-LSalAtl2s401-augustus-gene-0.13")

HSP 1 Score: 53.1434 bits (126), Expect = 9.242e-10
Identity = 40/100 (40.00%), Postives = 51/100 (51.00%), Query Frame = 0 
Query:    6 KFLLFGAFLMAFAHAQNEQKAAAAAPAPGGNDCNCQCISLQFRDSKGKIHGNCKST-LNGAQWCYVKYDKYSPCPDL---GRSQRFSGRY-WSNHACATP 100
            KFL+  + ++A   AQ+       AP+   N C CQC +  FRD +G   GNC S    GA+WCYV  D+   C D    GR  +F  R   S  ACATP
Sbjct:  102 KFLII-SVVVALTSAQD---ITLKAPSLAVN-CGCQCSNYIFRDLRGITQGNCNSADRTGAKWCYV--DRGHTCQDTRGSGRKDQFGRRRQISYEACATP 194

HSP 2 Score: 48.1358 bits (113), Expect = 5.266e-8
Identity = 36/112 (32.14%), Postives = 52/112 (46.43%), Query Frame = 0 
Query:    8 LLFGAFLMAFAHAQNEQKAAAAAPAPGGNDCNCQCISLQFRDSKGKIHGNCKST-LNGAQWCYVKYDKYSPCPDL---GRSQRFSGRYWSNHACATPSEDSPVCKYVFPPFV 115
            +L  + ++A   AQ+       AP+   N C CQC +  FRD +G   GNC S    GA+WCYV  D+   C D    GR  +F  R   ++  A       +CK++    V
Sbjct:    5 ILIISVVVALTSAQD---ITLKAPSLAVN-CGCQCSNYIFRDLRGITQGNCNSADQTGAKWCYV--DRGHTCQDTRGSGRRDQFGRRRQISYE-AFRQNPKMICKFLIISVV 109
[Close]
BLAST of EMLSAG00000000858 vs. L. salmonis peptides
Match: EMLSAP00000007117 (pep:novel supercontig:LSalAtl2s:LSalAtl2s401:30551:49956:-1 gene:EMLSAG00000007117 transcript:EMLSAT00000007117 description:"maker-LSalAtl2s401-augustus-gene-0.12")

HSP 1 Score: 50.8322 bits (120), Expect = 1.114e-8
Identity = 38/101 (37.62%), Postives = 51/101 (50.50%), Query Frame = 0 
Query:    8 LLFGAFLMAFAHAQNEQKAAAAAPAPGGNDCNCQCISLQFRDSKGKIHGNCKST-LNGAQWCYVKYDKYSPCPDL---GRSQRFS-GRYWSNHACATPSED 103
            +L  + ++A   AQ+       AP+   N C CQC +  FRD +G   GNC S    GA+WCYV  D+   C D     R+ +F   R  S  ACATP+ D
Sbjct:   60 ILIISVVVALTSAQD---ITLKAPSLAVN-CGCQCSNYIFRDLRGITQGNCNSADQTGAKWCYV--DRGHTCQDTIGSARNDQFGRRRQISYEACATPNCD 154
[Close]
BLAST of EMLSAG00000000858 vs. L. salmonis peptides
Match: EMLSAP00000001011 (pep:novel supercontig:LSalAtl2s:LSalAtl2s116:644091:644652:-1 gene:EMLSAG00000001011 transcript:EMLSAT00000001011 description:"maker-LSalAtl2s116-augustus-gene-6.17")

HSP 1 Score: 48.521 bits (114), Expect = 2.206e-8
Identity = 39/101 (38.61%), Postives = 49/101 (48.51%), Query Frame = 0 
Query:    5 IKFLLFGAFLMAFAHAQNEQKAAAAAPAPGGNDCNCQCISLQFRDSKGKIHGNCKST-LNGAQWCYVKYDKYSPCPDLGRSQRFS--GRY--WSNHACATP 100
            I  +L  +  +AF  AQ+       AP+   N C CQC +  FRD  G   GNC S    GA++CYV+        D  RS R    GR+   SN ACATP
Sbjct:    2 ISKILILSIFVAFGSAQD---ITLKAPSLAVN-CGCQCSNYIFRDGNGITQGNCNSADRTGAKFCYVEPGXTX--QDTRRSGRRDXFGRFRQISNEACATP 96
[Close]
BLAST of EMLSAG00000000858 vs. L. salmonis peptides
Match: EMLSAP00000006139 (pep:novel supercontig:LSalAtl2s:LSalAtl2s335:347119:354560:1 gene:EMLSAG00000006139 transcript:EMLSAT00000006139 description:"snap_masked-LSalAtl2s335-processed-gene-4.8")

HSP 1 Score: 49.2914 bits (116), Expect = 4.235e-8
Identity = 33/97 (34.02%), Postives = 48/97 (49.48%), Query Frame = 0 
Query:    9 LFGAFLMAFAHAQNEQKAAAAAPAPGGNDCNCQCISLQFRDSKGKIHGNCKST-LNGAQWCYVKYDKYSPCPDLG----RSQRFSGRYWSNHACATP 100
            +F   +      +N+ K  AA+      +C CQC +  F D  GK  GNC +   +GA+WCYV   + + C D+     + +R   R  SN ACATP
Sbjct:   43 VFFTIIACTIAQKNDIKLKAASLQT---NCGCQCNNYIFLDKYGKTQGNCNTVDKSGAKWCYV--SRGNTCNDVTYSSRKDERGQPRRISNEACATP 134
[Close]
BLAST of EMLSAG00000000858 vs. nr
Match: gi|155966304|gb|ABU41105.1| (hypothetical protein [Lepeophtheirus salmonis])

HSP 1 Score: 103.99 bits (258), Expect = 4.796e-26
Identity = 51/103 (49.51%), Postives = 63/103 (61.17%), Query Frame = 0 
Query:    5 IKFLLFGAFLMAFAHAQNEQKAAAAAPAPGGNDCNCQCISLQFRDSKGKIHGNCKSTLNGAQWCYVKYDKYSPCPDLGRSQRFSGRYWSNHACATPSEDSPVC 107
            ++ +  G  L    +  N Q+ A A P     DC CQCI+L F D  G+  GNC+ST NGAQWCYV+ D YS CPDL RS R+ G+Y+SNHAC T    SP C
Sbjct:    1 MRGIYIGIVLATCVYWSNAQQFAPA-PINSQADCQCQCIALSFYDEYGQQQGNCRSTFNGAQWCYVENDGYSSCPDLKRSTRYRGKYYSNHACITLPAYSPEC 102
[Close]
BLAST of EMLSAG00000000858 vs. Tigriopus kingsejongenis genes
Match: maker-scaffold381_size190066-snap-gene-0.31 (protein:Tk01605 transcript:maker-scaffold381_size190066-snap-gene-0.31-mRNA-1 annotation:"hypothetical protein")

HSP 1 Score: 60.077 bits (144), Expect = 2.852e-12
Identity = 29/77 (37.66%), Postives = 44/77 (57.14%), Query Frame = 0 
Query:   37 DCNCQCISLQFRDSKGKIHGNCKST-LNGAQWCYVKYDKYSPCPDLGRSQ-RFSG----RYWSNHACATPSEDSPVC 107
            +C CQC    +RD+ G++ GNC+S     A WCY+    ++ C D+ +S+ R       R WS  AC+TP+  SP+C
Sbjct:   47 NCGCQCDPYTWRDTLGRVQGNCRSADATKALWCYIPASAFTSCADIRQSRNRLDNFGRPRRWSYEACSTPALTSPIC 123
[Close]
BLAST of EMLSAG00000000858 vs. Tigriopus kingsejongenis genes
Match: maker-scaffold82_size396747-snap-gene-2.41 (protein:Tk06844 transcript:maker-scaffold82_size396747-snap-gene-2.41-mRNA-1 annotation:"hypothetical protein")

HSP 1 Score: 58.5362 bits (140), Expect = 2.792e-11
Identity = 29/63 (46.03%), Postives = 34/63 (53.97%), Query Frame = 0 
Query:   38 CNCQCISLQFRDSKGKIHGNCKSTLNGAQWCYVKYDKYSPCPDLGRSQRFSGRYWSNHACATP 100
            C+CQC +  F+     +HGNC     GA WCYVK    S C D   S R SG +WS  AC TP
Sbjct:  249 CDCQCNNYTFK-FDNTLHGNCLQPYKGALWCYVKDFGQSTCIDRLESSRVSGLFWSFQACGTP 310
[Close]
BLAST of EMLSAG00000000858 vs. Tigriopus kingsejongenis genes
Match: maker-scaffold381_size190066-snap-gene-0.30 (protein:Tk01607 transcript:maker-scaffold381_size190066-snap-gene-0.30-mRNA-1 annotation:"hypothetical protein AN3340.2")

HSP 1 Score: 51.6026 bits (122), Expect = 3.333e-9
Identity = 37/110 (33.64%), Postives = 50/110 (45.45%), Query Frame = 0 
Query:   14 LMAFAHAQNEQKAAAAAP-------APGGN-DCNCQCISLQFRDSKGKIHGNC-KSTLNGAQWCYVKYDKYS-PCPDLG-----RSQRFSGRYWSNHACATPSEDSPVCK 108
            L A   AQ+E +             AP     CNCQC +  ++    +IHGNC  +    A+WCYV  D+YS  C D+      R    + R WS  AC+TP   S  C+
Sbjct:   13 LTALTQAQDEAEDGVDTKSVEILQKAPSNQVSCNCQCDNYTYKGGDNQIHGNCFSADQTKAKWCYV--DQYSGECDDIQYSKNRRDSHGNLRKWSYQACSTPERASHQCR 120
[Close]
BLAST of EMLSAG00000000858 vs. Tigriopus kingsejongenis genes
Match: maker-scaffold381_size190066-snap-gene-0.32 (protein:Tk01608 transcript:maker-scaffold381_size190066-snap-gene-0.32-mRNA-1 annotation:"---NA---")

HSP 1 Score: 48.521 bits (114), Expect = 5.327e-8
Identity = 29/77 (37.66%), Postives = 40/77 (51.95%), Query Frame = 0 
Query:   38 CNCQCISLQFRDSKGKIHGNC-KSTLNGAQWCYVKYDKY-SPCPDL----GRSQRFSG-RYWSNHACATPSEDSPVC 107
            CNCQC +  ++    +IHGNC  +     +WCY+  D+Y + C D+     R   F   R WS  AC+TP   SP C
Sbjct:   47 CNCQCDNYTYKGDDNQIHGNCFTADHTRGKWCYL--DQYNNDCDDIQYSKNRRDSFGNLREWSYQACSTPQLGSPQC 121
The following BLAST results are available for this feature:
BLAST of EMLSAG00000000858 vs. GO
Analysis Date: 2014-04-02 (Blast vs. GO)
Total hits: 0
Match NameE-valueIdentityDescription
back to top
BLAST of EMLSAG00000000858 vs. C. finmarchicus
Analysis Date: 2014-05-09 (TblastN vs C. finmarchicus TSA)
Total hits: 25
Match NameE-valueIdentityDescription
gi|592953585|gb|GAXK01004968.1|1.840e-1851.28TSA: Calanus finmarchicus comp348412_c0_seq1 trans... [more]
gi|592932379|gb|GAXK01026174.1|1.404e-1650.62TSA: Calanus finmarchicus comp18158_c1_seq4 transc... [more]
gi|592932380|gb|GAXK01026173.1|7.522e-1649.38TSA: Calanus finmarchicus comp18158_c1_seq3 transc... [more]
gi|592932381|gb|GAXK01026172.1|1.346e-1544.21TSA: Calanus finmarchicus comp18158_c1_seq2 transc... [more]
gi|592932382|gb|GAXK01026171.1|1.305e-1441.05TSA: Calanus finmarchicus comp18158_c1_seq1 transc... [more]
gi|592932365|gb|GAXK01026188.1|2.648e-1455.22TSA: Calanus finmarchicus comp18158_c2_seq13 trans... [more]
gi|592932366|gb|GAXK01026187.1|3.260e-1455.22TSA: Calanus finmarchicus comp18158_c2_seq12 trans... [more]
gi|592906544|gb|GAXK01051831.1|4.485e-1453.52TSA: Calanus finmarchicus comp28981_c1_seq1 transc... [more]
gi|592772445|gb|GAXK01182123.1|7.674e-1445.45TSA: Calanus finmarchicus comp899023_c0_seq1 trans... [more]
gi|592848675|gb|GAXK01108869.1|7.875e-1452.31TSA: Calanus finmarchicus comp296545_c0_seq2 trans... [more]

Pages

back to top
BLAST of EMLSAG00000000858 vs. L. salmonis peptides
Analysis Date: 2014-05-10 (Blastp vs. self)
Total hits: 19
Match NameE-valueIdentityDescription
EMLSAP000000028909.574e-1238.14pep:novel supercontig:LSalAtl2s:LSalAtl2s166:44571... [more]
EMLSAP000000061412.168e-1033.33pep:novel supercontig:LSalAtl2s:LSalAtl2s335:38893... [more]
EMLSAP000000071234.230e-1040.00pep:novel supercontig:LSalAtl2s:LSalAtl2s401:84241... [more]
EMLSAP000000010154.874e-1038.61pep:novel supercontig:LSalAtl2s:LSalAtl2s116:78676... [more]
EMLSAP000000054219.204e-1047.92pep:novel supercontig:LSalAtl2s:LSalAtl2s292:10727... [more]
EMLSAP000000071229.242e-1040.00pep:novel supercontig:LSalAtl2s:LSalAtl2s401:64891... [more]
EMLSAP000000071171.114e-837.62pep:novel supercontig:LSalAtl2s:LSalAtl2s401:30551... [more]
EMLSAP000000010112.206e-838.61pep:novel supercontig:LSalAtl2s:LSalAtl2s116:64409... [more]
EMLSAP000000061394.235e-834.02pep:novel supercontig:LSalAtl2s:LSalAtl2s335:34711... [more]

Pages

back to top
BLAST of EMLSAG00000000858 vs. SwissProt
Analysis Date: 2017-02-10 (Blastp vs. SwissProt)
Total hits: 0
Match NameE-valueIdentityDescription
back to top
BLAST of EMLSAG00000000858 vs. Select Arthropod Genomes
Analysis Date: 2017-02-20 (Blastp vs. Selected Arthropods)
Total hits: 0
Match NameE-valueIdentityDescription
back to top
BLAST of EMLSAG00000000858 vs. nr
Analysis Date: 2017-02-20 (Blastp vs. NR (2/2017))
Total hits: 1
Match NameE-valueIdentityDescription
gi|155966304|gb|ABU41105.1|4.796e-2649.51hypothetical protein [Lepeophtheirus salmonis][more]
back to top
BLAST of EMLSAG00000000858 vs. Tigriopus kingsejongenis genes
Analysis Date: 2018-04-18 (Blastp vs. Tigriopus kingsejongensis proteins)
Total hits: 4
Match NameE-valueIdentityDescription
maker-scaffold381_size190066-snap-gene-0.312.852e-1237.66protein:Tk01605 transcript:maker-scaffold381_size1... [more]
maker-scaffold82_size396747-snap-gene-2.412.792e-1146.03protein:Tk06844 transcript:maker-scaffold82_size39... [more]
maker-scaffold381_size190066-snap-gene-0.303.333e-933.64protein:Tk01607 transcript:maker-scaffold381_size1... [more]
maker-scaffold381_size190066-snap-gene-0.325.327e-837.66protein:Tk01608 transcript:maker-scaffold381_size1... [more]
back to top
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
LSalAtl2s1146supercontigLSalAtl2s1146:143094..143555 -
Analyses
This gene is derived from or has results from the following analyses
Analysis NameDate Performed
ensembl2013-09-26 .965016
Blast vs. GO2014-04-02
TblastN vs C. finmarchicus TSA2014-05-09
Blastp vs. self2014-05-10
Blastp vs. SwissProt2017-02-10
Blastp vs. Selected Arthropods2017-02-20
Blastp vs. NR (2/2017)2017-02-20
Blastp vs. Tigriopus kingsejongensis proteins2018-04-18
Properties
Property NameValue
Logic nameensemblgenomes
Descriptionmaker-LSalAtl2s1146-augustus-gene-0.4
Biotypeprotein_coding
EvidenceIEA
Notehypothetical protein [Lepeophtheirus salmonis]
Cross References
External references for this gene
DatabaseAccession
Ensembl Metazoa (gene)EMLSAG00000000858 (primary cross-reference)
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameSpeciesType
EMLSAT00000000858EMLSAT00000000858-696705Lepeophtheirus salmonismRNA


Sequences
The following sequences are available for this feature:

gene from alignment at LSalAtl2s1146:143094..143555-

Legend: mRNA
Hold the cursor over a type above to highlight its positions in the sequence below.
>EMLSAG00000000858-683624 ID=EMLSAG00000000858-683624|Name=EMLSAG00000000858|organism=Lepeophtheirus salmonis|type=gene|length=462bp|location=Sequence derived from alignment at LSalAtl2s1146:143094..143555- (Lepeophtheirus salmonis)
ATGAGTCTTGGAATAAAGTTTCTTCTCTTTGGTGCATTCCTTATGGCATT
TGCCCATGCACAAAATGAACAAAAAGCTGCTGCTGCGGCTCCKGCCCCTG
GAGGAAATGATTGTAATTGCCAATGTATCTCCCTACAGTTCCGGGATTCC
AAAGGGAAAATACATGGAAACTGCAAGAGGTAAGCTAGTTACTAAATAGA
GATCTTTATCATTTTTTAACAATCTTCACTTTACAGCACATTGAATGGAG
CTCAGTGGTGCTATGTCAAATATGATAAATATAGTCCCTGTCCTGATCTT
GGACGTTCCCAACGTTTCAGTGGACGCTATTGGTCCAATCATGCATGTGC
TACTCCATCTGAGGATTCCCCTGTCTGCAAATATGTTTTCCCACCATTTG
TTCGAGAAACAGCATTTGCCTCTTCTGCATCTTCTAAGAATGTTGCTGAC
GGCGTTGTTTAA
back to top
Add to Basket