EMLSAG00000001327, EMLSAG00000001327-684093 (gene) Lepeophtheirus salmonis

Overview
NameEMLSAG00000001327
Unique NameEMLSAG00000001327-684093
Typegene
OrganismLepeophtheirus salmonis (salmon louse)
Associated RNAi Experiments

Nothing found

Homology
[Close]
BLAST of EMLSAG00000001327 vs. C. finmarchicus
Match: gi|592932382|gb|GAXK01026171.1| (TSA: Calanus finmarchicus comp18158_c1_seq1 transcribed RNA sequence)

HSP 1 Score: 70.8626 bits (172), Expect = 1.744e-14
Identity = 35/73 (47.95%), Postives = 46/73 (63.01%), Query Frame = 0 
Query:   15 ANNVRDCFCQCSSLSFRDKNNRVNGNCRTT-FNGGQWCYITDEAARNGDCPDSNPSTRFPGKKWSYFSCATPS 86
            A++  +C CQCS+LSFRD +  V GNC+T    G QWCY+   ++    C D  PS RFP   WSY +CATP+
Sbjct:  178 ASSFTNCGCQCSNLSFRDTSGIVQGNCKTVDGTGAQWCYVDSSSSS---CQDLVPSERFPHNPWSYEACATPA 387
[Close]
BLAST of EMLSAG00000001327 vs. C. finmarchicus
Match: gi|592932365|gb|GAXK01026188.1| (TSA: Calanus finmarchicus comp18158_c2_seq13 transcribed RNA sequence)

HSP 1 Score: 67.781 bits (164), Expect = 4.174e-14
Identity = 35/69 (50.72%), Postives = 48/69 (69.57%), Query Frame = 0 
Query:   20 DCFCQCSSLSFRDKNNRVNGNCRTT-FNGGQWCYITDEAARNGDCPD-SNPSTRFPGKKWSYFSCATPS 86
            +C CQCS+L+FRDK  + +GNC+++   G  WCY++   A+   C D S  STRFPGK WSY +CATP+
Sbjct:    4 NCGCQCSNLTFRDKYGKTHGNCKSSDHTGAVWCYVS--PAQTSSCQDLSYTSTRFPGKPWSYEACATPA 204
[Close]
BLAST of EMLSAG00000001327 vs. C. finmarchicus
Match: gi|592932366|gb|GAXK01026187.1| (TSA: Calanus finmarchicus comp18158_c2_seq12 transcribed RNA sequence)

HSP 1 Score: 67.781 bits (164), Expect = 5.106e-14
Identity = 35/69 (50.72%), Postives = 48/69 (69.57%), Query Frame = 0 
Query:   20 DCFCQCSSLSFRDKNNRVNGNCRTT-FNGGQWCYITDEAARNGDCPD-SNPSTRFPGKKWSYFSCATPS 86
            +C CQCS+L+FRDK  + +GNC+++   G  WCY++   A+   C D S  STRFPGK WSY +CATP+
Sbjct:    4 NCGCQCSNLTFRDKYGKTHGNCKSSDHTGAVWCYVS--PAQTSSCQDLSYTSTRFPGKPWSYEACATPA 204
[Close]
BLAST of EMLSAG00000001327 vs. C. finmarchicus
Match: gi|592932370|gb|GAXK01026183.1| (TSA: Calanus finmarchicus comp18158_c2_seq8 transcribed RNA sequence)

HSP 1 Score: 67.3958 bits (163), Expect = 2.171e-13
Identity = 35/69 (50.72%), Postives = 48/69 (69.57%), Query Frame = 0 
Query:   20 DCFCQCSSLSFRDKNNRVNGNCRTT-FNGGQWCYITDEAARNGDCPD-SNPSTRFPGKKWSYFSCATPS 86
            +C CQCS+L+FRDK  + +GNC+++   G  WCY++   A+   C D S  STRFPGK WSY +CATP+
Sbjct:    4 NCGCQCSNLTFRDKYGKTHGNCKSSDHTGAVWCYVSP--AQTSSCQDLSYTSTRFPGKPWSYEACATPA 204
[Close]
BLAST of EMLSAG00000001327 vs. C. finmarchicus
Match: gi|592932374|gb|GAXK01026179.1| (TSA: Calanus finmarchicus comp18158_c2_seq4 transcribed RNA sequence)

HSP 1 Score: 67.3958 bits (163), Expect = 2.772e-13
Identity = 35/69 (50.72%), Postives = 48/69 (69.57%), Query Frame = 0 
Query:   20 DCFCQCSSLSFRDKNNRVNGNCRTT-FNGGQWCYITDEAARNGDCPD-SNPSTRFPGKKWSYFSCATPS 86
            +C CQCS+L+FRDK  + +GNC+++   G  WCY++   A+   C D S  STRFPGK WSY +CATP+
Sbjct:    4 NCGCQCSNLTFRDKYGKTHGNCKSSDHTGAVWCYVSP--AQTSSCQDLSYTSTRFPGKPWSYEACATPA 204
[Close]
BLAST of EMLSAG00000001327 vs. C. finmarchicus
Match: gi|592932373|gb|GAXK01026180.1| (TSA: Calanus finmarchicus comp18158_c2_seq5 transcribed RNA sequence)

HSP 1 Score: 67.3958 bits (163), Expect = 2.970e-13
Identity = 35/69 (50.72%), Postives = 48/69 (69.57%), Query Frame = 0 
Query:   20 DCFCQCSSLSFRDKNNRVNGNCRTT-FNGGQWCYITDEAARNGDCPD-SNPSTRFPGKKWSYFSCATPS 86
            +C CQCS+L+FRDK  + +GNC+++   G  WCY++   A+   C D S  STRFPGK WSY +CATP+
Sbjct:    4 NCGCQCSNLTFRDKYGKTHGNCKSSDHTGAVWCYVS--PAQTSSCQDLSYTSTRFPGKPWSYEACATPA 204
[Close]
BLAST of EMLSAG00000001327 vs. C. finmarchicus
Match: gi|592932371|gb|GAXK01026182.1| (TSA: Calanus finmarchicus comp18158_c2_seq7 transcribed RNA sequence)

HSP 1 Score: 67.0106 bits (162), Expect = 3.179e-13
Identity = 35/69 (50.72%), Postives = 48/69 (69.57%), Query Frame = 0 
Query:   20 DCFCQCSSLSFRDKNNRVNGNCRTT-FNGGQWCYITDEAARNGDCPD-SNPSTRFPGKKWSYFSCATPS 86
            +C CQCS+L+FRDK  + +GNC+++   G  WCY++   A+   C D S  STRFPGK WSY +CATP+
Sbjct:    4 NCGCQCSNLTFRDKYGKTHGNCKSSDHTGAVWCYVS--PAQTSSCQDLSYTSTRFPGKPWSYEACATPA 204
[Close]
BLAST of EMLSAG00000001327 vs. C. finmarchicus
Match: gi|592932375|gb|GAXK01026178.1| (TSA: Calanus finmarchicus comp18158_c2_seq3 transcribed RNA sequence)

HSP 1 Score: 67.3958 bits (163), Expect = 3.441e-13
Identity = 35/69 (50.72%), Postives = 48/69 (69.57%), Query Frame = 0 
Query:   20 DCFCQCSSLSFRDKNNRVNGNCRTT-FNGGQWCYITDEAARNGDCPD-SNPSTRFPGKKWSYFSCATPS 86
            +C CQCS+L+FRDK  + +GNC+++   G  WCY++   A+   C D S  STRFPGK WSY +CATP+
Sbjct:    4 NCGCQCSNLTFRDKYGKTHGNCKSSDHTGAVWCYVSP--AQTSSCQDLSYTSTRFPGKPWSYEACATPA 204
[Close]
BLAST of EMLSAG00000001327 vs. C. finmarchicus
Match: gi|592956547|gb|GAXK01002009.1| (TSA: Calanus finmarchicus comp90527_c0_seq20 transcribed RNA sequence)

HSP 1 Score: 66.2402 bits (160), Expect = 3.782e-13
Identity = 38/82 (46.34%), Postives = 46/82 (56.10%), Query Frame = 0 
Query:   11 AAAPANNVRDCFCQCSSLSFRDKNNRVNGNCRTT-FNGGQWCYITDEAARNGDCPDSNPSTRFPGKKWSYFSCATPSTRQCV 91
            AAAPA     C CQCSSL ++DK   V GNCR+      +WCY+ + +     C D  PS R P   WSY +CATPS  QC 
Sbjct:  219 AAAPA-----CGCQCSSLVWQDKYGDVQGNCRSADHTKAKWCYVKEGST----CSDLVPSARHPRNPWSYQACATPSQGQCA 437
[Close]
BLAST of EMLSAG00000001327 vs. C. finmarchicus
Match: gi|592932372|gb|GAXK01026181.1| (TSA: Calanus finmarchicus comp18158_c2_seq6 transcribed RNA sequence)

HSP 1 Score: 66.6254 bits (161), Expect = 5.254e-13
Identity = 35/69 (50.72%), Postives = 48/69 (69.57%), Query Frame = 0 
Query:   20 DCFCQCSSLSFRDKNNRVNGNCRTT-FNGGQWCYITDEAARNGDCPD-SNPSTRFPGKKWSYFSCATPS 86
            +C CQCS+L+FRDK  + +GNC+++   G  WCY++   A+   C D S  STRFPGK WSY +CATP+
Sbjct:    4 NCGCQCSNLTFRDKYGKTHGNCKSSDHTGAVWCYVS--PAQTSSCQDLSYTSTRFPGKPWSYEACATPA 204
[Close]
BLAST of EMLSAG00000001327 vs. L. salmonis peptides
Match: EMLSAP00000001327 (pep:novel supercontig:LSalAtl2s:LSalAtl2s1223:219743:221280:1 gene:EMLSAG00000001327 transcript:EMLSAT00000001327 description:"maker-LSalAtl2s1223-augustus-gene-2.67")

HSP 1 Score: 258.455 bits (659), Expect = 1.530e-89
Identity = 128/128 (100.00%), Postives = 128/128 (100.00%), Query Frame = 0 
Query:    1 SLSEAQTVLKAAAPANNVRDCFCQCSSLSFRDKNNRVNGNCRTTFNGGQWCYITDEAARNGDCPDSNPSTRFPGKKWSYFSCATPSTRQCVLDAVRNGGCFPQVFDTKINVKSAFKPSKXPSSDPNSP 128
            SLSEAQTVLKAAAPANNVRDCFCQCSSLSFRDKNNRVNGNCRTTFNGGQWCYITDEAARNGDCPDSNPSTRFPGKKWSYFSCATPSTRQCVLDAVRNGGCFPQVFDTKINVKSAFKPSKXPSSDPNSP
Sbjct:    1 SLSEAQTVLKAAAPANNVRDCFCQCSSLSFRDKNNRVNGNCRTTFNGGQWCYITDEAARNGDCPDSNPSTRFPGKKWSYFSCATPSTRQCVLDAVRNGGCFPQVFDTKINVKSAFKPSKXPSSDPNSP 128
[Close]
BLAST of EMLSAG00000001327 vs. L. salmonis peptides
Match: EMLSAP00000005911 (pep:novel supercontig:LSalAtl2s:LSalAtl2s31:1336906:1338922:-1 gene:EMLSAG00000005911 transcript:EMLSAT00000005911 description:"maker-LSalAtl2s31-augustus-gene-12.7")

HSP 1 Score: 168.703 bits (426), Expect = 6.132e-54
Identity = 84/131 (64.12%), Postives = 103/131 (78.63%), Query Frame = 0 
Query:    1 SLSEAQTVLKAAAPAN-NVRDCFCQCSSLSFRDKNNRVNGNCRTTFNGGQWCYITDEAARNGDCPDSNPSTRFPGKKWSYFSCATPSTRQCVLDAVRNGGCFPQV--FDTKINVKSAFKPSKXPSSDPNSP 128
            S SEAQTVLKAAAPA+ ++ DCFCQCSSL+FRD+NNRVNGNCRTTF G QWCYITDEAARNGDCPD+ PS R PGK+WS+FSCATP+ RQCV + + + GC        T+IN+KS+   +    +DP++P
Sbjct:   18 SKSEAQTVLKAAAPASTSINDCFCQCSSLTFRDRNNRVNGNCRTTFQGAQWCYITDEAARNGDCPDAQPSRRQPGKQWSFFSCATPTVRQCVNNFLSSAGCNVAFGGIGTRINLKSSSPQASSIDNDPDAP 148
[Close]
BLAST of EMLSAG00000001327 vs. L. salmonis peptides
Match: EMLSAP00000000858 (pep:novel supercontig:LSalAtl2s:LSalAtl2s1146:143094:143555:-1 gene:EMLSAG00000000858 transcript:EMLSAT00000000858 description:"maker-LSalAtl2s1146-augustus-gene-0.4")

HSP 1 Score: 76.6406 bits (187), Expect = 1.513e-18
Identity = 34/67 (50.75%), Postives = 44/67 (65.67%), Query Frame = 0 
Query:   20 DCFCQCSSLSFRDKNNRVNGNCRTTFNGGQWCYITDEAARNGDCPDSNPSTRFPGKKWSYFSCATPS 86
            DC CQC SL FRD   +++GNC++T NG QWCY+  +  +   CPD   S RF G+ WS  +CATPS
Sbjct:   37 DCNCQCISLQFRDSKGKIHGNCKSTLNGAQWCYVKYD--KYSPCPDLGRSQRFSGRYWSNHACATPS 101
[Close]
BLAST of EMLSAG00000001327 vs. L. salmonis peptides
Match: EMLSAP00000000366 (pep:novel supercontig:LSalAtl2s:LSalAtl2s1053:57010:58418:-1 gene:EMLSAG00000000366 transcript:EMLSAT00000000366 description:"snap-LSalAtl2s1053-processed-gene-0.45")

HSP 1 Score: 72.0182 bits (175), Expect = 7.155e-17
Identity = 35/74 (47.30%), Postives = 47/74 (63.51%), Query Frame = 0 
Query:   11 AAAPANNVRDCFCQCSSLSFRDKNNRVNGNCRTTFNGGQWCYITDEAARNGDCPDSNPSTRFPGKKWSYFSCAT 84
            A AP N+  DC CQC +LSF D+  +  GNCR+TFNG QWCY+ ++   +  CP    STR+ GK +S  +C T
Sbjct:   23 APAPINSQADCQCQCIALSFYDEYGQQQGNCRSTFNGAQWCYVENDGXSS--CPXLKRSTRYRGKYYSNHACIT 94
[Close]
BLAST of EMLSAG00000001327 vs. L. salmonis peptides
Match: EMLSAP00000001837 (pep:novel supercontig:LSalAtl2s:LSalAtl2s1318:72145:72812:1 gene:EMLSAG00000001837 transcript:EMLSAT00000001837 description:"maker-LSalAtl2s1318-augustus-gene-0.12")

HSP 1 Score: 70.8626 bits (172), Expect = 2.060e-16
Identity = 34/68 (50.00%), Postives = 40/68 (58.82%), Query Frame = 0 
Query:   19 RDCFCQCSSLSFRDKNNRVNGNCRTTFNGGQWCYITDEAARNGDCPDSNPSTRFPGKKWSYFSCATPS 86
             DC CQC SL FRD      GNC +T NG QWCY+  +  R   CPD   S RF G+ WS  +CATP+
Sbjct:   36 EDCNCQCMSLKFRDSRGTTYGNCESTINGAQWCYVKYD--RFSPCPDLQSSRRFNGRYWSNHACATPA 101
[Close]
BLAST of EMLSAG00000001327 vs. L. salmonis peptides
Match: EMLSAP00000001834 (pep:novel supercontig:LSalAtl2s:LSalAtl2s1318:34086:34563:-1 gene:EMLSAG00000001834 transcript:EMLSAT00000001834 description:"maker-LSalAtl2s1318-augustus-gene-0.14")

HSP 1 Score: 67.3958 bits (163), Expect = 3.704e-15
Identity = 40/104 (38.46%), Postives = 51/104 (49.04%), Query Frame = 0 
Query:   21 CFCQCSSLSFRDKNNRVNGNCRTTFNGGQWCYITDEAARNGDCPDSNPSTRFPGKKWSYFSCATPSTRQCVLDAVRNGGCFPQVFDTKINVKSAFKPSKXPSSD 124
            C CQC SL FRD   R  GNCR+T NG QWCY+  +      CPD   S RF G+ WS  + ATP+    +  +V     FP          ++  PSK  + D
Sbjct:   38 CNCQCISLQFRDSRGRTYGNCRSTTNGAQWCYVKYDGF--SPCPDLRVSQRFRGRYWSNHAXATPAENSPIXRSV-----FPPFIPLXAXXPASSVPSKNVADD 134
[Close]
BLAST of EMLSAG00000001327 vs. L. salmonis peptides
Match: EMLSAP00000000311 (pep:novel supercontig:LSalAtl2s:LSalAtl2s1046:206967:207933:1 gene:EMLSAG00000000311 transcript:EMLSAT00000000311 description:"maker-LSalAtl2s1046-augustus-gene-1.15")

HSP 1 Score: 67.3958 bits (163), Expect = 5.549e-15
Identity = 31/65 (47.69%), Postives = 40/65 (61.54%), Query Frame = 0 
Query:   21 CFCQCSSLSFRDKNNRVNGNCRTTFNGGQWCYITDEAARNGDCPDSNPSTRFPGKKWSYFSCATP 85
            C CQ  SL+FRD    ++GNC++  NG QWCY+  +  R   CPD   S RF G+ WS  +CATP
Sbjct:   58 CNCQXISLTFRDSRGTIHGNCKSMINGAQWCYVKYD--RFSPCPDLRASQRFRGRYWSNHACATP 120
[Close]
BLAST of EMLSAG00000001327 vs. L. salmonis peptides
Match: EMLSAP00000004889 (pep:novel supercontig:LSalAtl2s:LSalAtl2s257:179358:180381:1 gene:EMLSAG00000004889 transcript:EMLSAT00000004889 description:"maker-LSalAtl2s257-augustus-gene-1.12")

HSP 1 Score: 64.3142 bits (155), Expect = 2.476e-14
Identity = 38/86 (44.19%), Postives = 53/86 (61.63%), Query Frame = 0 
Query:    1 SLSEAQTVLKAAAPANNVRDCFCQCSSLSFRDKNNRVNGNCRTT-FNGGQWCYITDEAARNGDCPDSNPSTRFPGKKWSYFSCATP 85
            +LS AQ  +   AP+  V++C CQCSSL+F D   R+ GNCR+  + G +WCYI      +  C D+  S+RF   +WSY +CATP
Sbjct:    3 TLSSAQNGIILKAPSL-VQNCGCQCSSLTFADSYGRIQGNCRSADYTGARWCYI----PFSHTCNDAQYSSRFR-NQWSYEACATP 82
[Close]
BLAST of EMLSAG00000001327 vs. L. salmonis peptides
Match: EMLSAP00000002406 (pep:novel supercontig:LSalAtl2s:LSalAtl2s145:1581187:1602244:-1 gene:EMLSAG00000002406 transcript:EMLSAT00000002406 description:"maker-LSalAtl2s145-augustus-gene-16.13")

HSP 1 Score: 56.9954 bits (136), Expect = 1.989e-11
Identity = 25/67 (37.31%), Postives = 38/67 (56.72%), Query Frame = 0 
Query:   19 RDCFCQCSSLSFRDKNNRVNGNCRTTFNGGQWCYITDEAARNGDCPDSNPSTRFPGKKWSYFSCATP 85
            R+C CQC  L + D+   ++GNC +T +G  WCY+  +  ++  C D   S  F  + WSY +C TP
Sbjct:   53 RNCLCQCIPLQYVDRKGIMHGNCTSTNDGALWCYV--KYQKSSPCGDLVKSDIFQDRYWSYHACTTP 117
[Close]
BLAST of EMLSAG00000001327 vs. L. salmonis peptides
Match: EMLSAP00000002890 (pep:novel supercontig:LSalAtl2s:LSalAtl2s166:445712:450389:1 gene:EMLSAG00000002890 transcript:EMLSAT00000002890 description:"maker-LSalAtl2s166-augustus-gene-4.9")

HSP 1 Score: 53.5286 bits (127), Expect = 2.853e-10
Identity = 28/68 (41.18%), Postives = 41/68 (60.29%), Query Frame = 0 
Query:   19 RDCFCQCSSLSFRDKNNRVNGNCRTT-FNGGQWCYITDEAARNGDCPDSNPSTRFPGKKWSYFSCATP 85
            ++C CQC+S +F D      GNC ++ F GG+WCY+         C D+ PS R+ G +WSY +C+TP
Sbjct:   32 QNCGCQCNSYTFSDIKGYTQGNCFSSDFTGGRWCYVD----YGNTCHDAVPSLRYNG-QWSYEACSTP 94
[Close]
BLAST of EMLSAG00000001327 vs. nr
Match: gi|155966304|gb|ABU41105.1| (hypothetical protein [Lepeophtheirus salmonis])

HSP 1 Score: 74.3294 bits (181), Expect = 1.204e-14
Identity = 39/91 (42.86%), Postives = 55/91 (60.44%), Query Frame = 0 
Query:   11 AAAPANNVRDCFCQCSSLSFRDKNNRVNGNCRTTFNGGQWCYITDEAARNGDCPDSNPSTRFPGKKWSYFSCAT--PSTRQCVLDAVRNGG 99
            A AP N+  DC CQC +LSF D+  +  GNCR+TFNG QWCY+ ++   +  CPD   STR+ GK +S  +C T    + +C+   + N G
Sbjct:   23 APAPINSQADCQCQCIALSFYDEYGQQQGNCRSTFNGAQWCYVENDGYSS--CPDLKRSTRYRGKYYSNHACITLPAYSPECLGFVIYNEG 111
[Close]
BLAST of EMLSAG00000001327 vs. Tigriopus kingsejongenis genes
Match: maker-scaffold82_size396747-snap-gene-2.41 (protein:Tk06844 transcript:maker-scaffold82_size396747-snap-gene-2.41-mRNA-1 annotation:"hypothetical protein")

HSP 1 Score: 52.7582 bits (125), Expect = 2.138e-9
Identity = 25/71 (35.21%), Postives = 39/71 (54.93%), Query Frame = 0 
Query:   21 CFCQCSSLSFRDKNNRVNGNCRTTFNGGQWCYITDEAARNGDCPDSNPSTRFPGKKWSYFSCATPSTRQCV 91
            C CQC++ +F+  +N ++GNC   + G  WCY+ D       C D   S+R  G  WS+ +C TP  + C+
Sbjct:  249 CDCQCNNYTFK-FDNTLHGNCLQPYKGALWCYVKDFGQST--CIDRLESSRVSGLFWSFQACGTPKYQDCL 316
[Close]
BLAST of EMLSAG00000001327 vs. Tigriopus kingsejongenis genes
Match: maker-scaffold381_size190066-snap-gene-0.30 (protein:Tk01607 transcript:maker-scaffold381_size190066-snap-gene-0.30-mRNA-1 annotation:"hypothetical protein AN3340.2")

HSP 1 Score: 49.6766 bits (117), Expect = 1.740e-8
Identity = 36/109 (33.03%), Postives = 56/109 (51.38%), Query Frame = 0 
Query:   13 APANNVRDCFCQCSSLSFRDKNNRVNGNCRTTFNGGQ----WCYITDEAARNGDCPDSNPS-----TRFPGKKWSYFSCATP--STRQCVLDAVRNGGCFPQVFDTKIN 110
            AP+N V  C CQC + +++  +N+++GNC   F+  Q    WCY+   +   G+C D   S     +    +KWSY +C+TP  ++ QC     RN G F  V +   N
Sbjct:   38 APSNQVS-CNCQCDNYTYKGGDNQIHGNC---FSADQTKAKWCYVDQYS---GECDDIQYSKNRRDSHGNLRKWSYQACSTPERASHQC-----RNNGSFNSVINNNSN 134
[Close]
BLAST of EMLSAG00000001327 vs. Tigriopus kingsejongenis genes
Match: maker-scaffold381_size190066-snap-gene-0.32 (protein:Tk01608 transcript:maker-scaffold381_size190066-snap-gene-0.32-mRNA-1 annotation:"---NA---")

HSP 1 Score: 47.3654 bits (111), Expect = 1.367e-7
Identity = 29/79 (36.71%), Postives = 44/79 (55.70%), Query Frame = 0 
Query:   13 APANNVRDCFCQCSSLSFRDKNNRVNGNCRTT-FNGGQWCYITDEAARNGDCPD----SNPSTRFPG-KKWSYFSCATP 85
            AP+N V  C CQC + +++  +N+++GNC T     G+WCY+      N DC D     N    F   ++WSY +C+TP
Sbjct:   40 APSNRVS-CNCQCDNYTYKGDDNQIHGNCFTADHTRGKWCYLDQ---YNNDCDDIQYSKNRRDSFGNLREWSYQACSTP 114
[Close]
BLAST of EMLSAG00000001327 vs. Tigriopus kingsejongenis genes
Match: maker-scaffold381_size190066-snap-gene-0.31 (protein:Tk01605 transcript:maker-scaffold381_size190066-snap-gene-0.31-mRNA-1 annotation:"hypothetical protein")

HSP 1 Score: 45.4394 bits (106), Expect = 6.003e-7
Identity = 34/101 (33.66%), Postives = 47/101 (46.53%), Query Frame = 0 
Query:    7 TVLKAAAPANNVRDCFCQCSSLSFRDKNNRVNGNCRTT-FNGGQWCYITDEAARNGDCPDSNPS-TRFPG----KKWSYFSCATPSTRQCVLDAVRNGGCF 101
             VLKA +   N+ +C CQC   ++RD   RV GNCR+       WCYI   A  +  C D   S  R       ++WSY +C+TP+    +      GG  
Sbjct:   37 IVLKAPS---NLINCGCQCDPYTWRDTLGRVQGNCRSADATKALWCYIPASAFTS--CADIRQSRNRLDNFGRPRRWSYEACSTPALTSPICLGFGQGGLL 132
The following BLAST results are available for this feature:
BLAST of EMLSAG00000001327 vs. GO
Analysis Date: 2014-04-02 (Blast vs. GO)
Total hits: 0
Match NameE-valueIdentityDescription
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BLAST of EMLSAG00000001327 vs. C. finmarchicus
Analysis Date: 2014-05-09 (TblastN vs C. finmarchicus TSA)
Total hits: 25
Match NameE-valueIdentityDescription
gi|592932382|gb|GAXK01026171.1|1.744e-1447.95TSA: Calanus finmarchicus comp18158_c1_seq1 transc... [more]
gi|592932365|gb|GAXK01026188.1|4.174e-1450.72TSA: Calanus finmarchicus comp18158_c2_seq13 trans... [more]
gi|592932366|gb|GAXK01026187.1|5.106e-1450.72TSA: Calanus finmarchicus comp18158_c2_seq12 trans... [more]
gi|592932370|gb|GAXK01026183.1|2.171e-1350.72TSA: Calanus finmarchicus comp18158_c2_seq8 transc... [more]
gi|592932374|gb|GAXK01026179.1|2.772e-1350.72TSA: Calanus finmarchicus comp18158_c2_seq4 transc... [more]
gi|592932373|gb|GAXK01026180.1|2.970e-1350.72TSA: Calanus finmarchicus comp18158_c2_seq5 transc... [more]
gi|592932371|gb|GAXK01026182.1|3.179e-1350.72TSA: Calanus finmarchicus comp18158_c2_seq7 transc... [more]
gi|592932375|gb|GAXK01026178.1|3.441e-1350.72TSA: Calanus finmarchicus comp18158_c2_seq3 transc... [more]
gi|592956547|gb|GAXK01002009.1|3.782e-1346.34TSA: Calanus finmarchicus comp90527_c0_seq20 trans... [more]
gi|592932372|gb|GAXK01026181.1|5.254e-1350.72TSA: Calanus finmarchicus comp18158_c2_seq6 transc... [more]

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BLAST of EMLSAG00000001327 vs. L. salmonis peptides
Analysis Date: 2014-05-10 (Blastp vs. self)
Total hits: 14
Match NameE-valueIdentityDescription
EMLSAP000000013271.530e-89100.00pep:novel supercontig:LSalAtl2s:LSalAtl2s1223:2197... [more]
EMLSAP000000059116.132e-5464.12pep:novel supercontig:LSalAtl2s:LSalAtl2s31:133690... [more]
EMLSAP000000008581.513e-1850.75pep:novel supercontig:LSalAtl2s:LSalAtl2s1146:1430... [more]
EMLSAP000000003667.155e-1747.30pep:novel supercontig:LSalAtl2s:LSalAtl2s1053:5701... [more]
EMLSAP000000018372.060e-1650.00pep:novel supercontig:LSalAtl2s:LSalAtl2s1318:7214... [more]
EMLSAP000000018343.704e-1538.46pep:novel supercontig:LSalAtl2s:LSalAtl2s1318:3408... [more]
EMLSAP000000003115.549e-1547.69pep:novel supercontig:LSalAtl2s:LSalAtl2s1046:2069... [more]
EMLSAP000000048892.476e-1444.19pep:novel supercontig:LSalAtl2s:LSalAtl2s257:17935... [more]
EMLSAP000000024061.989e-1137.31pep:novel supercontig:LSalAtl2s:LSalAtl2s145:15811... [more]
EMLSAP000000028902.853e-1041.18pep:novel supercontig:LSalAtl2s:LSalAtl2s166:44571... [more]

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BLAST of EMLSAG00000001327 vs. SwissProt
Analysis Date: 2017-02-10 (Blastp vs. SwissProt)
Total hits: 0
Match NameE-valueIdentityDescription
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BLAST of EMLSAG00000001327 vs. Select Arthropod Genomes
Analysis Date: 2017-02-20 (Blastp vs. Selected Arthropods)
Total hits: 0
Match NameE-valueIdentityDescription
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BLAST of EMLSAG00000001327 vs. nr
Analysis Date: 2017-02-20 (Blastp vs. NR (2/2017))
Total hits: 1
Match NameE-valueIdentityDescription
gi|155966304|gb|ABU41105.1|1.204e-1442.86hypothetical protein [Lepeophtheirus salmonis][more]
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BLAST of EMLSAG00000001327 vs. Tigriopus kingsejongenis genes
Analysis Date: 2018-04-18 (Blastp vs. Tigriopus kingsejongensis proteins)
Total hits: 4
Match NameE-valueIdentityDescription
maker-scaffold82_size396747-snap-gene-2.412.138e-935.21protein:Tk06844 transcript:maker-scaffold82_size39... [more]
maker-scaffold381_size190066-snap-gene-0.301.740e-833.03protein:Tk01607 transcript:maker-scaffold381_size1... [more]
maker-scaffold381_size190066-snap-gene-0.321.367e-736.71protein:Tk01608 transcript:maker-scaffold381_size1... [more]
maker-scaffold381_size190066-snap-gene-0.316.003e-733.66protein:Tk01605 transcript:maker-scaffold381_size1... [more]
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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
LSalAtl2s1223supercontigLSalAtl2s1223:219743..221280 +
Analyses
This gene is derived from or has results from the following analyses
Analysis NameDate Performed
ensembl2013-09-26 .965016
Blast vs. GO2014-04-02
TblastN vs C. finmarchicus TSA2014-05-09
Blastp vs. self2014-05-10
Blastp vs. SwissProt2017-02-10
Blastp vs. Selected Arthropods2017-02-20
Blastp vs. NR (2/2017)2017-02-20
Blastp vs. Tigriopus kingsejongensis proteins2018-04-18
Properties
Property NameValue
Logic nameensemblgenomes
Descriptionmaker-LSalAtl2s1223-augustus-gene-2.67
Biotypeprotein_coding
EvidenceIEA
Notehypothetical protein [Lepeophtheirus salmonis]
Cross References
External references for this gene
DatabaseAccession
Ensembl Metazoa (gene)EMLSAG00000001327 (primary cross-reference)
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameSpeciesType
EMLSAT00000001327EMLSAT00000001327-697174Lepeophtheirus salmonismRNA


Sequences
The following sequences are available for this feature:

gene from alignment at LSalAtl2s1223:219743..221280+

Legend: mRNA
Hold the cursor over a type above to highlight its positions in the sequence below.
>EMLSAG00000001327-684093 ID=EMLSAG00000001327-684093|Name=EMLSAG00000001327|organism=Lepeophtheirus salmonis|type=gene|length=1538bp|location=Sequence derived from alignment at LSalAtl2s1223:219743..221280+ (Lepeophtheirus salmonis)
AGCCTCTCCGAGGCTCAAACAGTCCTCAAGGCTGCAGCACCAGCAAATAA
CGTACGAGACTGCTTTTGTCAATGTTCCAGTCTTAGTTTCAGGGATAAGA
ATAATCGTGTGAATGGAAACTGCAGAACGTGAGTTTATAAATATCCATTC
CATCATATTATAATTGATTTTTATATAAGTAATGAGTTTTTCATTAAGAG
CGCTTCAACTCTTATATAAATAAAACACAAACGGTTACAAATTTTACCAA
ATTTATTTTTTCAGTACAAATTGTAGACATATTGATTTGTTGATTTGTTT
GATGTGACCATAACGAGCACGTTTACAGAAGTCCAATCGTTGAACCCCTT
TTTTCCATTACTTTTTCTAATAAATTGATCGATATTGTAGCAATTTGACG
TTCGATATTTTCTCTGAGCTCTTCTGACGTCGCCAGATTATTAGTGTAGA
CTAATGACTTCCAAGGCCCAAAAGAAAATAATACAAAGGCGTTAAATCGC
ACGAGCGAGCTGGTCAATCAGCTGGTCATTTCTCGAAATAACACGCTCAT
CAAATTTGCTTTGCAATAAATCAATCGTAAAGTTTGCTGTTGACAAAGTG
GCACCGTCTTGTTGAAGCTACATGTCTCCCAAGTCCATTCCTTCCAATTG
GGGCAAAAGAAAAATCAGTTATCCTGGTATGATAGTGATTTCCATTTACA
GTAACGTGGCTATTATCATCATGAAGGAAAAAATATGGCCGAATGATTCC
TCCAGCATGAAGTTTACTGCAAACAGTAATTTTTTCGAGATGCAATGATA
TCTCGTGAATCCCTTGTGGATTGCTTTTTGACCAATAATGCATTTTTTGC
TTATTAACAAAGCCATTAACCCAAAAATGAATTTCATCACTCAAGATGAA
TTTATGTTCTTAATATTGCGACAATTTAACAGTCATTTTGATAATAAATT
TGGATAATTTGCAATCACTGATAGAGTGTATATTGTTCCATGATTAAAGG
TATACCAATGAAGTTCCTAAATTTACTTTCTAAATTACATATGGCATCTT
TTTCCCCCTAACGGGGAAAAAATGAAGCATCGGTTATGAAAAACCATTTA
AGACTTAACTAATTTATATTATTTATCCTTTTTAGAACATTCAATGGAGG
ACAATGGTGTTATATTACAGATGAGGCCGCTCGTAATGGAGATTGCCCAG
ATTCTAATCCTTCCACCCGATTCCCTGGAAAAAAATGGTCATACTTCTCT
TGTGCTACTCCAAGTACCCGTCAATGTGTCTTGGATGCAGTGGTAAGTTT
TTATCTGATTAAATGTAATTATTTAACCTATTATTATGGATTATTTTTTA
TAATAGAGAAATGGAGGCTGCTTCCCTCAAGTTTTTGATACAAAAATAAA
CGTCAAATCCGCCTTCAAGCCATCTAAAMCTCCATCATCCGATCCTAACT
CTCCTTAAAAATATATCCCTACCTGAAATTGTACCTTCAAATTATAGATA
TATTATATATATATAGATAAATAAAAATTATAGCGACA
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