EMLSAG00000003163, EMLSAG00000003163-685929 (gene) Lepeophtheirus salmonis
Overview
Associated RNAi Experiments
Nothing found Homology
BLAST of EMLSAG00000003163 vs. L. salmonis peptides
Match: EMLSAP00000003163 (pep:novel supercontig:LSalAtl2s:LSalAtl2s1767:48381:49134:-1 gene:EMLSAG00000003163 transcript:EMLSAT00000003163 description:"maker-LSalAtl2s1767-snap-gene-0.4") HSP 1 Score: 345.125 bits (884), Expect = 2.560e-122 Identity = 169/169 (100.00%), Postives = 169/169 (100.00%), Query Frame = 0 Query: 1 MNSFHLVLIAFFLQGINGKITDTECVDDSETLCQRQEGSCYIPSIQHRCPVTCGVCKAKCKDYKDDCPLENEQCDYDETFQTECPKTCATCDVCEDLIDPLICNEGLSDCHHKYMRYACRKTCLYCMDPYNDVGNGAFCKMHKISGSCENNEVVIHMCKKTCNICDEET 169 MNSFHLVLIAFFLQGINGKITDTECVDDSETLCQRQEGSCYIPSIQHRCPVTCGVCKAKCKDYKDDCPLENEQCDYDETFQTECPKTCATCDVCEDLIDPLICNEGLSDCHHKYMRYACRKTCLYCMDPYNDVGNGAFCKMHKISGSCENNEVVIHMCKKTCNICDEET Sbjct: 1 MNSFHLVLIAFFLQGINGKITDTECVDDSETLCQRQEGSCYIPSIQHRCPVTCGVCKAKCKDYKDDCPLENEQCDYDETFQTECPKTCATCDVCEDLIDPLICNEGLSDCHHKYMRYACRKTCLYCMDPYNDVGNGAFCKMHKISGSCENNEVVIHMCKKTCNICDEET 169
BLAST of EMLSAG00000003163 vs. L. salmonis peptides
Match: EMLSAP00000010898 (pep:novel supercontig:LSalAtl2s:LSalAtl2s726:28203:28961:-1 gene:EMLSAG00000010898 transcript:EMLSAT00000010898 description:"maker-LSalAtl2s726-augustus-gene-0.7") HSP 1 Score: 240.736 bits (613), Expect = 2.973e-81 Identity = 117/168 (69.64%), Postives = 132/168 (78.57%), Query Frame = 0 Query: 1 MNSFHLVLIAFFLQGINGKITDTECVDDSETLCQRQEGSCYIPSIQHRCPVTCGVCKAKCKDYKDDCPLENEQCDYDETFQTECPKTCATCDVCEDLIDPLICNEGLSDCHHKYMRYACRKTCLYCMDPYNDVGNGAFCKMHKISGSCENNEVVIHMCKKTCNICDEE 168 MNSF+LV+IA F QGINGKIT+TECVDDSE +CQRQEGSCYIPS Q CP TCG+CKAKCKDY DC LE QC ++ET +ECPKTCATCDVCEDLID +C EGLSDC + YMRYACRKTCLYC DP ND GN +FCK H G+C +N MCK++C ICD E Sbjct: 1 MNSFYLVIIANFFQGINGKITETECVDDSEQVCQRQEGSCYIPSFQFSCPQTCGICKAKCKDYNGDCALEYMQCGFNETLVSECPKTCATCDVCEDLIDTSLCVEGLSDCLNTYMRYACRKTCLYCEDPCNDAGNDSFCKSHVSGGTCTSNAAARRMCKESCRICDPE 168
BLAST of EMLSAG00000003163 vs. L. salmonis peptides
Match: EMLSAP00000010899 (pep:novel supercontig:LSalAtl2s:LSalAtl2s726:81215:81971:1 gene:EMLSAG00000010899 transcript:EMLSAT00000010899 description:"maker-LSalAtl2s726-augustus-gene-0.5") HSP 1 Score: 234.958 bits (598), Expect = 6.872e-79 Identity = 116/168 (69.05%), Postives = 131/168 (77.98%), Query Frame = 0 Query: 1 MNSFHLVLIAFFLQGINGKITDTECVDDSETLCQRQEGSCYIPSIQHRCPVTCGVCKAKCKDYKDDCPLENEQCDYDETFQTECPKTCATCDVCEDLIDPLICNEGLSDCHHKYMRYACRKTCLYCMDPYNDVGNGAFCKMHKISGSCENNEVVIHMCKKTCNICDEE 168 MNSF+LVL+A F QGINGKI+ TECVDDSE C+ QE C+IPS+Q CP TCGVC A+CKDYK DC +E QC Y+ TF ECPKTCA CDVCEDLID IC E L DC + YMRYACRKTCLYC+D NDVG+ FC + K+SGSCENNEVV MCKKTCNIC+ E Sbjct: 1 MNSFYLVLMACFFQGINGKISATECVDDSEQSCKSQESRCFIPSVQFSCPQTCGVCNARCKDYKGDCSVEEMQCGYNLTFPIECPKTCAKCDVCEDLIDTAICMESLDDCTNAYMRYACRKTCLYCIDSCNDVGSEDFCNIQKLSGSCENNEVVKKMCKKTCNICEFE 168
BLAST of EMLSAG00000003163 vs. L. salmonis peptides
Match: EMLSAP00000010892 (pep:novel supercontig:LSalAtl2s:LSalAtl2s726:17362:18120:-1 gene:EMLSAG00000010892 transcript:EMLSAT00000010892 description:"maker-LSalAtl2s726-augustus-gene-0.6") HSP 1 Score: 214.157 bits (544), Expect = 9.447e-71 Identity = 105/168 (62.50%), Postives = 125/168 (74.40%), Query Frame = 0 Query: 1 MNSFHLVLIAFFLQGINGKITDTECVDDSETLCQRQEGSCYIPSIQHRCPVTCGVCKAKCKDYKDDCPLENEQCDYDETFQTECPKTCATCDVCEDLIDPLICNEGLSDCHHKYMRYACRKTCLYCMDPYNDVGNGAFCKMHKISGSCENNEVVIHMCKKTCNICDEE 168 M SF+LVLIA F+QGINGK DTEC DDS+ +C+ QE C+IPS+Q CP TC VC+A+CKDY D+C EN QC + T ECPKTCATCDVCEDLID IC L DCH+ YMRYACRKTCLYC+DP N+VGN FCK+H + CE N+V MC+K+CN C+ E Sbjct: 1 MKSFYLVLIACFIQGINGKKYDTECEDDSQHVCENQESRCFIPSVQFNCPKTCSVCEAQCKDYNDNCYQENFQCGNNVTISNECPKTCATCDVCEDLIDTSICQTSLKDCHNNYMRYACRKTCLYCLDPCNNVGNDDFCKLHTTNRICEKNDVFKKMCRKSCNFCELE 168
BLAST of EMLSAG00000003163 vs. L. salmonis peptides
Match: EMLSAP00000006239 (pep:novel supercontig:LSalAtl2s:LSalAtl2s3409:1295:2068:-1 gene:EMLSAG00000006239 transcript:EMLSAT00000006239 description:"maker-LSalAtl2s3409-augustus-gene-0.1") HSP 1 Score: 167.162 bits (422), Expect = 1.871e-52 Identity = 86/168 (51.19%), Postives = 108/168 (64.29%), Query Frame = 0 Query: 1 MNSFHLVLIAFFLQGINGKITDTECVDDSETLCQRQEGSCYIPSIQHRCPVTCGVCKAKCKDYKDDCPLENEQCDYDETFQTECPKTCATCDVCEDLIDPLICNEGLSDCHHKYMRYACRKTCLYCMDPYNDVGNGAFCKMHKISGSCENNEVVIHMCKKTCNICDEE 168 M S +LVLIA F +GING + + EC+DDS+ C+ +E C+ P Q+ CP TCGVC CKDY C E+ Q + ECPKTCA CD+CEDLID IC LS+C K M+YACRK+C YC D NDVG+ FC +H G CE NE V MC+K+C +C+ E Sbjct: 1 MKSKYLVLIACFFRGINGIVLEMECLDDSKRSCEGKENQCFEPYQQYTCPETCGVCNTTCKDYNGICFNEDSQXTINSNLLYECPKTCAKCDLCEDLIDSSICETRLSECALKKMKYACRKSCKYCKDACNDVGSHDFCDVHVRRGDCEKNETVKRMCRKSCELCEIE 168
BLAST of EMLSAG00000003163 vs. L. salmonis peptides
Match: EMLSAP00000003732 (pep:novel supercontig:LSalAtl2s:LSalAtl2s2000:16746:17193:1 gene:EMLSAG00000003732 transcript:EMLSAT00000003732 description:"maker-LSalAtl2s2000-augustus-gene-0.2") HSP 1 Score: 125.176 bits (313), Expect = 7.409e-37 Identity = 62/108 (57.41%), Postives = 79/108 (73.15%), Query Frame = 0 Query: 59 KCKDYKDDCPLENEQCDYDETFQTECPKTCATCDVCEDLIDPLICNEGLSDCHHKYMRYACRKTCLYCMDPYNDVGNGAFCKMHKISGSCENNEVVIHMCKKTCNICD 166 KCKDY ++C E QC +ET EC KTCA DVCEDLID IC + L DC++ YM+YACRKTCLYC+DP NDVGN FCK+HK +G+ ++NE +C+K+CN C+ Sbjct: 1 KCKDYINNCYGEFSQCGSNETISKECLKTCAKXDVCEDLIDTSICEKSLKDCNNNYMKYACRKTCLYCLDPCNDVGNADFCKIHKDNGAFKSNEAFKIICRKSCNFCE 108
BLAST of EMLSAG00000003163 vs. L. salmonis peptides
Match: EMLSAP00000007568 (pep:novel supercontig:LSalAtl2s:LSalAtl2s4372:5191:5850:1 gene:EMLSAG00000007568 transcript:EMLSAT00000007568 description:"maker-LSalAtl2s4372-snap-gene-0.1") HSP 1 Score: 119.013 bits (297), Expect = 4.222e-34 Identity = 63/128 (49.22%), Postives = 76/128 (59.38%), Query Frame = 0 Query: 24 ECVDDSETLCQRQEGSCYIPSIQHRCPVTCGVCKAKCKDYKDDCPLENEQCDYDETFQTECPKTCATCDVCEDLIDPLICNEGLSDCHHKYMRYACRKTCLYCMDPYNDVGNGAFCKMHKISGSCENN 151 +C+D E+ C+ + C+ SIQ CP TCGVC A CKDY +C E C + ECPKTCA CDVCEDLID IC LS+C M+YACRK+C +C D NDVG+ C H G CE N Sbjct: 2 DCLDSPESNCRSXKDQCFDSSIQFVCPQTCGVCNAICKDYNSNCLTEESXCILNNNXLDECPKTCAKCDVCEDLIDSSICETKLSECAQNQMKYACRKSCKHCEDKCNDVGSHDLCSEHVRRGDCEKN 129
BLAST of EMLSAG00000003163 vs. L. salmonis peptides
Match: EMLSAP00000005975 (pep:novel supercontig:LSalAtl2s:LSalAtl2s322:19068:19805:-1 gene:EMLSAG00000005975 transcript:EMLSAT00000005975 description:"maker-LSalAtl2s322-augustus-gene-0.10") HSP 1 Score: 79.7221 bits (195), Expect = 4.792e-19 Identity = 55/149 (36.91%), Postives = 77/149 (51.68%), Query Frame = 0 Query: 18 GKITDTECVDDSET---LCQRQEGSCYIPSIQHRCPVTCGVCKAKCKDYKDDCPLENEQCDYDETFQTECPKTCATCDVCEDLIDPLICNEGLSDCHHKY-MRYACRKTCLYCMDPYNDVG-NGAFCKMHKISGSCENNEVVIHMCKKT 161 G IT+ EC + L + + +C IPS Q CP CGVC+A+CKD+ C + C Q CPK+CA+CD CED+I P +C + C + YACR+TC C D ND + C + + G C N+ + I+ KK Sbjct: 20 GLITEFECRNSYHNCRDLVETTDRACLIPSYQWTCPEDCGVCRARCKDFFAGCFDSSSLC-LQSHMQKHCPKSCASCDECEDIISPRLCEQYRGRCKTDISVIYACRETCGLCDDDCNDAFVQESMCTIFESRGYC-NDPININFMKKA 166
BLAST of EMLSAG00000003163 vs. L. salmonis peptides
Match: EMLSAP00000004640 (pep:novel supercontig:LSalAtl2s:LSalAtl2s2425:15271:17023:1 gene:EMLSAG00000004640 transcript:EMLSAT00000004640 description:"maker-LSalAtl2s2425-augustus-gene-0.2") HSP 1 Score: 75.8702 bits (185), Expect = 1.173e-17 Identity = 60/171 (35.09%), Postives = 84/171 (49.12%), Query Frame = 0 Query: 6 LVLIAFFLQGINGKITDTECVDDSETLCQRQEGSCYIPSIQHRCPVTCGVCKAKCKDYKDDCPLENEQC-DYDETFQTECPKTCATCDVCEDLIDPLICNEGLSDCHHKYMRYACRKTCLYCMD------PYNDVGNGAFCKMHKISGSCEN----NEVVIHMCKKTCNIC 165 L++I+FFL G+ D C D+ E+ C+ C P +C +CG C++ C D C +C D D+ F EC + C CD CEDL++ L+CNE + CH++ +RY C TC C PYN C K SG C+ N + C+KTCN C Sbjct: 6 LIIISFFLVVAYGQ-GDRMCRDEMES-CETNAYKCMNPEYYFKCKKSCG-CESACTDKSIKCIQNPNKCLDRDQRF--ECQRVCGNCDGCEDLLEHLMCNELKNLCHNENVRYFCPATCRLCEKGCRDNLPYN-----MMCNNFKKSGYCDRKSIYNRFMQSACQKTCNFC 166
BLAST of EMLSAG00000003163 vs. L. salmonis peptides
Match: EMLSAP00000005974 (pep:novel supercontig:LSalAtl2s:LSalAtl2s322:1175:2268:1 gene:EMLSAG00000005974 transcript:EMLSAT00000005974 description:"maker-LSalAtl2s322-augustus-gene-0.11") HSP 1 Score: 75.0998 bits (183), Expect = 1.592e-17 Identity = 50/134 (37.31%), Postives = 72/134 (53.73%), Query Frame = 0 Query: 41 YIPSIQHRCPVTCGVCKAKCKDYKDDCPLENEQCDYDETFQTECPKTCATCDVCEDLIDPLICNEGLSDCHH-KYMRYACRKTCLYCMDPYNDVG-NGAFCKMHKISGSCENNEVVIHM---CKKTCNICDEET 169 Y Q CP CGVC+A C+D C +E C ++ + +CPK+CA+CD CEDLI+ +C+ C ++YACRKTC C D ND + + C + +G CE + + M C++TC C ET Sbjct: 4 YCLXXQWMCPEQCGVCQASCRDTGASCLEHSESC-LQKSIEKQCPKSCASCDDCEDLINSDLCSGYKHRCGEDTSVQYACRKTCGLCDDSCNDASVHESLCYKFENNGYCEKSNTMDFMNRACRRTCGFCFLET 136
BLAST of EMLSAG00000003163 vs. nr
Match: gi|225712722|gb|ACO12207.1| (ZK643.6 precursor [Lepeophtheirus salmonis]) HSP 1 Score: 174.481 bits (441), Expect = 6.679e-53 Identity = 89/165 (53.94%), Postives = 107/165 (64.85%), Query Frame = 0 Query: 1 MNSFHLVLIAFFLQGINGKITDTECVDDSETLCQRQEGSCYIPSIQHRCPVTCGVCKAKCKDYKDDCPLENEQCDYDETFQTECPKTCATCDVCEDLIDPLICNEGLSDCHHKYMRYACRKTCLYCMDPYNDVGNGAFCKMHKISGSCENNEVVIHMCKKTCNIC 165 M S +LVLIA F QGING I++T CVD+S+++C +G C PSI + CP TCGVCKA CKDY +C E+ QC ++ CPKTCATCD CEDLID IC SDC M+Y CRK+C YC D NDV + CK H G C NNE V MCKK+C +C Sbjct: 1 MKSLYLVLIACFFQGINGLISNTLCVDNSKSVCNSLQGQCNQPSILYTCPETCGVCKAICKDYNANCFNEDSQCTINKNLSNTCPKTCATCDECEDLIDSSICENKKSDCAEDNMKYVCRKSCKYCEDTCNDVASDELCKSHVSRGDCGNNEAVKRMCKKSCELC 165
BLAST of EMLSAG00000003163 vs. nr
Match: gi|290462093|gb|ADD24094.1| (protein ZK643.6 [Lepeophtheirus salmonis]) HSP 1 Score: 73.9442 bits (180), Expect = 1.419e-13 Identity = 56/170 (32.94%), Postives = 85/170 (50.00%), Query Frame = 0 Query: 6 LVLIAFFLQGINGKITDTECVDDSETLCQRQEGSCYIPSIQHRCPVTCGVCKAKCKDYKDDCPLENEQCDYDETFQTECPKTCATCDVCEDLIDPLICNEGLSDCHHKYMRYACRKTCLYCMD------PYNDVGNGAFCKMHKISGSCEN----NEVVIHMCKKTCNIC 165 L++I+FFL +NG+ T C ++ E+ C+ C P +C +CG C++ C D C +C D + EC + C CD CEDL++ ++CN+ + C++ +RY C TC C PYN V C K SG C+ N + C+KTCN+C Sbjct: 6 LIIISFFLVVVNGQGNST-CENEMES-CETNTFKCMNPEYYFKCKKSCG-CESACTDTSIKCINNPNKC-LDRDQRLECQRACGNCDRCEDLLEHIMCNQLKNLCNNGNVRYFCPATCRLCEKSCRDNLPYNRV-----CHNFKKSGFCDRKSIYNRFMKSACQKTCNLC 166 The following BLAST results are available for this feature:
BLAST of EMLSAG00000003163 vs. GO
Analysis Date: 2014-04-02 (Blast vs. GO) Total hits: 0
BLAST of EMLSAG00000003163 vs. C. finmarchicus
Analysis Date: 2014-05-09 (TblastN vs C. finmarchicus TSA) Total hits: 0
BLAST of EMLSAG00000003163 vs. L. salmonis peptides
Analysis Date: 2014-05-10 (Blastp vs. self) Total hits: 25
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BLAST of EMLSAG00000003163 vs. SwissProt
Analysis Date: 2017-02-10 (Blastp vs. SwissProt) Total hits: 0
BLAST of EMLSAG00000003163 vs. Select Arthropod Genomes
Analysis Date: 2017-02-20 (Blastp vs. Selected Arthropods) Total hits: 0
BLAST of EMLSAG00000003163 vs. nr
Analysis Date: 2017-02-20 (Blastp vs. NR (2/2017)) Total hits: 2
BLAST of EMLSAG00000003163 vs. Tigriopus kingsejongenis genes
Analysis Date: 2018-04-18 (Blastp vs. Tigriopus kingsejongensis proteins) Total hits: 0
Alignments
The following features are aligned
Analyses
This gene is derived from or has results from the following analyses
Properties
Cross References
External references for this gene
Relationships
The following mRNA feature(s) are a part of this gene:
Sequences
The following sequences are available for this feature:
gene from alignment at LSalAtl2s1767:48381..49134- Legend: mRNA Hold the cursor over a type above to highlight its positions in the sequence below.>EMLSAG00000003163-685929 ID=EMLSAG00000003163-685929|Name=EMLSAG00000003163|organism=Lepeophtheirus salmonis|type=gene|length=754bp|location=Sequence derived from alignment at LSalAtl2s1767:48381..49134- (Lepeophtheirus salmonis)back to top Add to Basket
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