EMLSAT00000007125, EMLSAT00000007125-702972 (mRNA) Lepeophtheirus salmonis

Overview
NameEMLSAT00000007125
Unique NameEMLSAT00000007125-702972
TypemRNA
OrganismLepeophtheirus salmonis (salmon louse)
Associated RNAi Experiments
Table of all RNA interference experiments conducted using this feature, grouped by Phenotype CV: reproduction, female reproduction, egg string deformation, no eggstrings
Gallery Image Title Gene or target symbol Sex/Stage Phenotype Datesort descending
AV F404 female
  1. PreAdult1
  2. Adult
 -Missing-
reproduction, female reproduction, egg string deformation, no eggstrings 		14.03.2019 - 08:35
24.04.2019 - 08:23
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
LSalAtl2s401supercontigLSalAtl2s401:98982..101147 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
ensembl2013-09-26 .965016
Properties
Property NameValue
Logic nameensemblgenomes
Biotypeprotein_coding
EvidenceIEA
Cross References
External references for this mRNA
DatabaseAccession
Ensembl Metazoa (transcript)EMLSAT00000007125 (primary cross-reference)
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
EMLSAG00000007125EMLSAG00000007125-689891Lepeophtheirus salmonisgene


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
EMLSAE00000031303EMLSAE00000031303-740231Lepeophtheirus salmonisexon
EMLSAE00000031304EMLSAE00000031304-740232Lepeophtheirus salmonisexon
EMLSAE00000031305EMLSAE00000031305-740233Lepeophtheirus salmonisexon
EMLSAE00000031306EMLSAE00000031306-740234Lepeophtheirus salmonisexon
EMLSAE00000031307EMLSAE00000031307-740235Lepeophtheirus salmonisexon
EMLSAE00000031308EMLSAE00000031308-740236Lepeophtheirus salmonisexon


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
polypeptide-auto772088auto772088Lepeophtheirus salmonispolypeptide
EMLSAP00000007125EMLSAP00000007125Lepeophtheirus salmonispolypeptide


Sequences
The following sequences are available for this feature:

protein sequence of EMLSAP00000007125

>EMLSAP00000007125 ID=EMLSAP00000007125|Name=EMLSAP00000007125|organism=Lepeophtheirus salmonis|type=polypeptide|length=521bp
MISCDVHYPYYSLDGSCNSLGSPTRGMTFMPFRXVVKPMDMNEADAVFVK
QFEMDGTLCMEHRASFKKQKLKYDPIVRNFAEFVSLDMVQTLGTVRNTGD
THDWDDDLLKNGECPSHYEEETLNRITSFIDGSQIYGTTFHVSSSLRKME
NGLLHIPQEEVQSFHTQMEREQGMSVELFITLFKLEHNRLASQIKDAYKD
YGVILGRKEDETIYQESRRIIIGVLQHIIYDKFLPVILGSDLFNRFELTT
IKNTYYDRNLNPSIFNGFLTAFFDIFTEPCDNMTNSFSEDDLMSDINSII
NLNKYPHLIAIFKDFNDDHGTYQSYKNLCGLANQTISNITWTELLDVFKG
NKSSIDLFSGGFVEEPVQDGLIGPTFACIIAYQFHLAKAGDRHFYSNVRH
GYPSHHNPHTDQTLIQSLQKPKPKKLKKSFIRQIEAKFYKDDPNFNYIRD
SYRFNYDEVNEIRHRSLGGLFCDNGRISHTSQFSFYKKEGKWNHIIPCDS
ILPFNTRIFIDSSNANLIKKK
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mRNA from alignment at LSalAtl2s401:98982..101147+

Legend: exonpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
>EMLSAT00000007125-702972 ID=EMLSAT00000007125-702972|Name=EMLSAT00000007125|organism=Lepeophtheirus salmonis|type=mRNA|length=2166bp|location=Sequence derived from alignment at LSalAtl2s401:98982..101147+ (Lepeophtheirus salmonis)
CATCGACTCAAGCCCTCTTTCATTTTCAGGATTTTTATGCATATATCATT
TGTTATAAGCCAACCCTATATATCACATAACTTTTCTAATCTCAAAAATA
ACCTCTTGTTTTCTTCTCCAAATTATTTTTCTACATCTAATTAGGTCTAA
GGAAATGTCGAAATAGGATCACGGATATTGGACACCCCTATAACTATGAT
GAATCCGTATTTCACACCAACATTAGGGAAATGATCTCTTGTGATGTACA
CTACCCTTACTATAGTTTGGACGGATCCTGTAACAGCCTTGGCTCTCCTA
CTCGCGGAATGACATTTATGCCTTTTCGASGTGTGGTKAAGCCAATGGAT
ATGAGTATGCAGCCTTTATTCAGATCTTTTATAAGCTATACTAATATCAT
ATGATTATACTGAATTATAATTATAGATGAAGCGGATGCAGTTTTTGTAA
AACAATTTGAAATGGACGGGACTTTGTGCATGGAACATCGGGCTTCTTTT
AAAAAACAAAAGTTGAAATATGATCCTATTGTGAGGAACTTTGCAGAATT
TGTATCTTTAGATATGGTTCAGACCTTAGGAACCGTTCGTAATACAGGAG
ATACGCGTAAGAACAGACTCGATAGGCAGATTAAAATAATACATATCTTT
CTTTAGATGATTGGGACGATGATCTCCTGAAGAATGGAGAATGTCCATCT
CATTACGAAGAAGAAACCTTGAATCGAATTACCTCTTTCATTGATGGATC
ACAAATCTATGGAACAACTTTTCATGTATCCTCGTCTCTTCGAAAAATGG
AGAATGGGCTATTGCATATCCCTCAAGAAGAAGTTCAAAGTTTCCATACC
CAAATGGAAAGGTAACCTTTAGTCATGATAGTAAATCAGACGCTTATATT
TATTTCTCAATTCACTTCCAGAGAACAAGGCATGAGTGTAGAGCTATTCA
TTACACTATTCAAACTTGAGCATAATCGATTAGCTAGTCAAATTAAAGAT
GCATATAAGGTAAATTTGACATAATATTAATATTGTAAATAAAACTGTAA
CTCTGAAGGACTATGGAGTGATCCTTGGAAGAAAAGAGGATGAAACTATC
TATCAAGAGAGTCGAAGGATCATTATCGGAGTATTGCAACATATCATCTA
CGATAAATTTCTACCGGTGATCCTTGGATCAGATCTTTTTAATCGATTTG
AGCTCACAACAATCAAAAATACATACTATGATAGGAATTTAAATCCCTCA
ATTTTCAACGGATTTTTAACCGCATTTTTTGATATATTTACTGAGCCTTG
TGACAATATGACTAACAGTTTTAGTGAGGATGATCTTATGTCTGATATTA
ATTCCATTATCAATTTGAATAAATATCCTCACCTTATTGCCATTTTCAAA
GACTTTAACGACGATCATGGAACCTACCAAAGCTATAAAAATCTTTGCGG
ATTGGCTAATCAAACCATTTCAAATATTACATGGACGGAATTACTTGATG
TTTTTAAAGGGAACAAAAGTTCCATTGATTTATTTTCAGGGGGATTCGTA
GAAGAACCTGTTCAAGATGGACTCATAGGTAGATATAATTATACATTAGA
AGATAGCTATCTATAATGATTACTGTTACATTTACATAGGGCCAACATTT
GCCTGTATTATTGCTTATCAATTTCACCTTGCAAAGGCTGGTGATCGACA
CTTCTATTCCAACGTTCGACATGGCTATCCGTCACATCATAATCCCCACA
CGGATCAGACCCTCATTCAAAGTCTTCAAAAACCTAAGCCTAAAAAATTA
AAAAAATCTTTCATCCGACAAATAGAGGCTAAATTTTATAAAGATGATCC
TAATTTTAATTACATCCGGGATTCTTATCGCTTTAATTATGATGAAGTGA
ATGAAATTCGTCACCGATCCTTAGGAGGACTCTTTTGTGACAATGGAAGA
ATCTCCCATACTTCACAGTTCTCTTTTTATAAGAAGGAAGGAAAATGGAA
TCATATCATCCCCTGTGATTCCATATTGCCTTTCAACACTCGAATCTTTA
TAGATTCAAGTAATGCCAACCTAATTAAGAAAAAATAAATTATATGTGTA
CATAGTTCATGTTATTACTATAGAAAGTCAAGAATAAATGTTCTTATTTC
GTTGAAGCAAGCAATT
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