EMLSAG00000007123, EMLSAG00000007123-689889 (gene) Lepeophtheirus salmonis

Overview
NameEMLSAG00000007123
Unique NameEMLSAG00000007123-689889
Typegene
OrganismLepeophtheirus salmonis (salmon louse)
Associated RNAi Experiments

Nothing found

Homology
[Close]
BLAST of EMLSAG00000007123 vs. C. finmarchicus
Match: gi|592932378|gb|GAXK01026175.1| (TSA: Calanus finmarchicus comp18158_c1_seq5 transcribed RNA sequence)

HSP 1 Score: 81.2629 bits (199), Expect = 6.347e-19
Identity = 46/93 (49.46%), Postives = 53/93 (56.99%), Query Frame = 0 
Query:    5 FLIISVVVALTSAQDITL-KAPSLAVNCGCQCSNYIFRDLRGITQGNCNSADRTGAKWCYVDRGH-TCQDTRGSGRNDQFGRRRQISYEACAT 95
            F  I   +AL++    TL KA S   NCGCQCS+  FRD   I QGNC + D TGA+WCYVD  H +CQD   S R          SYEACAT
Sbjct:   49 FFTILASMALSTTYSKTLNKASSPYTNCGCQCSSLTFRDSANIIQGNCKTVDSTGAQWCYVDSSHSSCQDLVPSQR----FPHNPWSYEACAT 315
[Close]
BLAST of EMLSAG00000007123 vs. C. finmarchicus
Match: gi|592932381|gb|GAXK01026172.1| (TSA: Calanus finmarchicus comp18158_c1_seq2 transcribed RNA sequence)

HSP 1 Score: 83.9593 bits (206), Expect = 9.555e-19
Identity = 47/94 (50.00%), Postives = 54/94 (57.45%), Query Frame = 0 
Query:    5 FLIISVVVALTSAQDITL-KAPSLAVNCGCQCSNYIFRDLRGITQGNCNSADRTGAKWCYVDRGH-TCQDTRGSGRNDQFGRRRQISYEACATP 96
            F  I   +AL++    TL KA S   NCGCQCS+  FRD   I QGNC + D TGA+WCYVD  H +CQD   S R          SYEACATP
Sbjct:   49 FFTILASMALSTTYSKTLNKASSPYTNCGCQCSSLTFRDSANIIQGNCKTVDSTGAQWCYVDSSHSSCQDLVPSQRF----PHNPWSYEACATP 318
[Close]
BLAST of EMLSAG00000007123 vs. C. finmarchicus
Match: gi|592848675|gb|GAXK01108869.1| (TSA: Calanus finmarchicus comp296545_c0_seq2 transcribed RNA sequence)

HSP 1 Score: 82.4185 bits (202), Expect = 1.101e-18
Identity = 45/94 (47.87%), Postives = 56/94 (59.57%), Query Frame = 0 
Query:    6 LIISVVVALTSAQDIT-LKAPSLAVNCGCQCSNYIFRDLRGITQGNCNSADRTGAKWCYVDRGH--TCQDTRGSGRNDQFGRRRQISYEACATP 96
            L++ +  ++ +   +T  KA S   NC CQCS+  F+D  G  QGNCNSAD TGA+WCYVD  H  +CQD   S R  Q       SYEACATP
Sbjct:  142 LLVFLFFSMAACLRLTGPKAASPYTNCDCQCSSLTFQDKYGRIQGNCNSADHTGARWCYVDSAHHSSCQDLHHSARFPQ----NPWSYEACATP 411
[Close]
BLAST of EMLSAG00000007123 vs. C. finmarchicus
Match: gi|592932380|gb|GAXK01026173.1| (TSA: Calanus finmarchicus comp18158_c1_seq3 transcribed RNA sequence)

HSP 1 Score: 81.2629 bits (199), Expect = 4.917e-18
Identity = 45/92 (48.91%), Postives = 53/92 (57.61%), Query Frame = 0 
Query:    6 LIISVVVALTSAQDITLKAPSLAVNCGCQCSNYIFRDLRGITQGNCNSADRTGAKWCYVD-RGHTCQDTRGSGRNDQFGRRRQISYEACATP 96
            ++I++V+  T       KA S   NCGCQCSN  FRD  GI QGNC + D TGA+WCYVD    +CQD   S R          SYEACATP
Sbjct:  121 ILITLVLGATCLSVEKTKAASSFTNCGCQCSNLSFRDTSGIVQGNCKTVDGTGAQWCYVDSSSSSCQDLVPSER----FPHNPWSYEACATP 384
[Close]
BLAST of EMLSAG00000007123 vs. C. finmarchicus
Match: gi|592932382|gb|GAXK01026171.1| (TSA: Calanus finmarchicus comp18158_c1_seq1 transcribed RNA sequence)

HSP 1 Score: 81.6481 bits (200), Expect = 6.919e-18
Identity = 45/92 (48.91%), Postives = 53/92 (57.61%), Query Frame = 0 
Query:    6 LIISVVVALTSAQDITLKAPSLAVNCGCQCSNYIFRDLRGITQGNCNSADRTGAKWCYVD-RGHTCQDTRGSGRNDQFGRRRQISYEACATP 96
            ++I++V+  T       KA S   NCGCQCSN  FRD  GI QGNC + D TGA+WCYVD    +CQD   S R          SYEACATP
Sbjct:  121 ILITLVLGATCLSVEKTKAASSFTNCGCQCSNLSFRDTSGIVQGNCKTVDGTGAQWCYVDSSSSSCQDLVPSERF----PHNPWSYEACATP 384
[Close]
BLAST of EMLSAG00000007123 vs. C. finmarchicus
Match: gi|592848676|gb|GAXK01108868.1| (TSA: Calanus finmarchicus comp296545_c0_seq1 transcribed RNA sequence)

HSP 1 Score: 80.4925 bits (197), Expect = 1.049e-17
Identity = 47/94 (50.00%), Postives = 54/94 (57.45%), Query Frame = 0 
Query:    5 FLIISVVVALTSAQDITLKAPSLAVNCGCQCSNYIFRDLRGITQGNCNSADRTGAKWCYVDRGH--TCQDTRGSGRNDQFGRRRQISYEACATP 96
            FL  S+   L   +    KA S   NC CQCS+  F+D  G  QGNCNSAD TGA+WCYVD  H  +CQD + S R  Q       SYEACATP
Sbjct:  467 FLFFSMATCL---RLTGPKAASPYTNCDCQCSSLTFQDKYGRIQGNCNSADHTGARWCYVDSAHHSSCQDLQHSARFPQ----NPWSYEACATP 727

HSP 2 Score: 77.7962 bits (190), Expect = 8.990e-17
Identity = 44/94 (46.81%), Postives = 55/94 (58.51%), Query Frame = 0 
Query:    6 LIISVVVALTSAQDIT-LKAPSLAVNCGCQCSNYIFRDLRGITQGNCNSADRTGAKWCYVDRGH--TCQDTRGSGRNDQFGRRRQISYEACATP 96
            L++ +  ++ +   +T  KA S   NC CQCS+  F+D  G  QGNCNSAD TGA+WCYVD  H  +CQD   S R          SYEACATP
Sbjct:  139 LLVFLFFSMAACLRLTGPKAASPYTNCDCQCSSLNFQDKYGRIQGNCNSADHTGARWCYVDSAHHSSCQDLHHSVR----FPNNPWSYEACATP 408
[Close]
BLAST of EMLSAG00000007123 vs. C. finmarchicus
Match: gi|592932367|gb|GAXK01026186.1| (TSA: Calanus finmarchicus comp18158_c2_seq11 transcribed RNA sequence)

HSP 1 Score: 79.7221 bits (195), Expect = 1.722e-17
Identity = 49/105 (46.67%), Postives = 55/105 (52.38%), Query Frame = 0 
Query:    1 MICKFLIISVVVALT-SAQDITLKAPSLAVNCGCQCSNYIFRDLRGITQGNCNSADRTGAKWCYVD-RGHTCQD-----TRGSGRNDQFGRRRQISYEACATPRC 98
             I  FLI+    A +    D   KA S   NCGCQCSN  F+D  G T GNC   D TGA+WCYVD R  +CQD     TR  G        +  SYEACATP C
Sbjct:  163 TISTFLILLAPTAESVKTTDTNTKAASPYTNCGCQCSNLTFKDKYGNTHGNCKRVDHTGAQWCYVDPRQGSCQDLSYTSTRFPG--------KPWSYEACATPAC 453
[Close]
BLAST of EMLSAG00000007123 vs. C. finmarchicus
Match: gi|592932369|gb|GAXK01026184.1| (TSA: Calanus finmarchicus comp18158_c2_seq9 transcribed RNA sequence)

HSP 1 Score: 79.7221 bits (195), Expect = 1.935e-17
Identity = 49/105 (46.67%), Postives = 55/105 (52.38%), Query Frame = 0 
Query:    1 MICKFLIISVVVALT-SAQDITLKAPSLAVNCGCQCSNYIFRDLRGITQGNCNSADRTGAKWCYVD-RGHTCQD-----TRGSGRNDQFGRRRQISYEACATPRC 98
             I  FLI+    A +    D   KA S   NCGCQCSN  F+D  G T GNC   D TGA+WCYVD R  +CQD     TR  G        +  SYEACATP C
Sbjct:  163 TISTFLILLAPTAESVKTTDTNTKAASPYTNCGCQCSNLTFKDKYGNTHGNCKRVDHTGAQWCYVDPRQGSCQDLSYTSTRFPG--------KPWSYEACATPAC 453
[Close]
BLAST of EMLSAG00000007123 vs. C. finmarchicus
Match: gi|592772445|gb|GAXK01182123.1| (TSA: Calanus finmarchicus comp899023_c0_seq1 transcribed RNA sequence)

HSP 1 Score: 79.337 bits (194), Expect = 2.427e-17
Identity = 47/99 (47.47%), Postives = 60/99 (60.61%), Query Frame = 0 
Query:    6 LIISVVVALTS--AQDITLKAPSLAVNCGCQCSNYIFRDLRGITQGNCNSADRTGAKWCYVDRGH------TCQDTRGSGRNDQFGRRRQISYEACATP 96
            +I+S V  L+   AQ+   +A S  VNCGCQCSNY   D  G  QGNC+S D TGA WCYV++G       TCQD +   R+ +F  +   SYEAC+TP
Sbjct:   26 VILSFVFHLSPSLAQNGQTRAASTLVNCGCQCSNYRVMDRYGELQGNCDSVDNTGAAWCYVEQGEFVKTQSTCQDLK---RSQRFPAKF-WSYEACSTP 310
[Close]
BLAST of EMLSAG00000007123 vs. C. finmarchicus
Match: gi|592932379|gb|GAXK01026174.1| (TSA: Calanus finmarchicus comp18158_c1_seq4 transcribed RNA sequence)

HSP 1 Score: 76.2554 bits (186), Expect = 1.988e-16
Identity = 40/75 (53.33%), Postives = 44/75 (58.67%), Query Frame = 0 
Query:   23 KAPSLAVNCGCQCSNYIFRDLRGITQGNCNSADRTGAKWCYVD-RGHTCQDTRGSGRNDQFGRRRQISYEACATP 96
            KA S   NCGCQCS+  FRD  G  QGNC + D TGA+WCYVD    +CQD   S R          SYEACATP
Sbjct:  109 KAASPFTNCGCQCSSLTFRDTSGTVQGNCKTVDGTGAQWCYVDSSSSSCQDLVPSER----FPHNPWSYEACATP 321
[Close]
BLAST of EMLSAG00000007123 vs. L. salmonis peptides
Match: EMLSAP00000007123 (pep:novel supercontig:LSalAtl2s:LSalAtl2s401:84241:84844:-1 gene:EMLSAG00000007123 transcript:EMLSAT00000007123 description:"maker-LSalAtl2s401-augustus-gene-0.14")

HSP 1 Score: 344.739 bits (883), Expect = 5.626e-122
Identity = 175/175 (100.00%), Postives = 175/175 (100.00%), Query Frame = 0 
Query:    1 MICKFLIISVVVALTSAQDITLKAPSLAVNCGCQCSNYIFRDLRGITQGNCNSADRTGAKWCYVDRGHTCQDTRGSGRNDQFGRRRQISYEACATPRCGGGFGGGFGGRFTNNNNNGFGGNTGFGGNTGFGGNAGFGNSGLSGLFRPSGTGSGISISNILKPRRTQSFSGSGVVL 175
            MICKFLIISVVVALTSAQDITLKAPSLAVNCGCQCSNYIFRDLRGITQGNCNSADRTGAKWCYVDRGHTCQDTRGSGRNDQFGRRRQISYEACATPRCGGGFGGGFGGRFTNNNNNGFGGNTGFGGNTGFGGNAGFGNSGLSGLFRPSGTGSGISISNILKPRRTQSFSGSGVVL
Sbjct:    1 MICKFLIISVVVALTSAQDITLKAPSLAVNCGCQCSNYIFRDLRGITQGNCNSADRTGAKWCYVDRGHTCQDTRGSGRNDQFGRRRQISYEACATPRCGGGFGGGFGGRFTNNNNNGFGGNTGFGGNTGFGGNAGFGNSGLSGLFRPSGTGSGISISNILKPRRTQSFSGSGVVL 175
[Close]
BLAST of EMLSAG00000007123 vs. L. salmonis peptides
Match: EMLSAP00000007122 (pep:novel supercontig:LSalAtl2s:LSalAtl2s401:64891:74089:-1 gene:EMLSAG00000007122 transcript:EMLSAT00000007122 description:"maker-LSalAtl2s401-augustus-gene-0.13")

HSP 1 Score: 204.912 bits (520), Expect = 9.064e-67
Identity = 97/98 (98.98%), Postives = 97/98 (98.98%), Query Frame = 0 
Query:    1 MICKFLIISVVVALTSAQDITLKAPSLAVNCGCQCSNYIFRDLRGITQGNCNSADRTGAKWCYVDRGHTCQDTRGSGRNDQFGRRRQISYEACATPRC 98
            MICKFLIISVVVALTSAQDITLKAPSLAVNCGCQCSNYIFRDLRGITQGNCNSADRTGAKWCYVDRGHTCQDTRGSGR DQFGRRRQISYEACATPRC
Sbjct:   99 MICKFLIISVVVALTSAQDITLKAPSLAVNCGCQCSNYIFRDLRGITQGNCNSADRTGAKWCYVDRGHTCQDTRGSGRKDQFGRRRQISYEACATPRC 196

HSP 2 Score: 186.808 bits (473), Expect = 1.197e-59
Identity = 89/92 (96.74%), Postives = 90/92 (97.83%), Query Frame = 0 
Query:    1 MICKFLIISVVVALTSAQDITLKAPSLAVNCGCQCSNYIFRDLRGITQGNCNSADRTGAKWCYVDRGHTCQDTRGSGRNDQFGRRRQISYEA 92
            MICK LIISVVVALTSAQDITLKAPSLAVNCGCQCSNYIFRDLRGITQGNCNSAD+TGAKWCYVDRGHTCQDTRGSGR DQFGRRRQISYEA
Sbjct:    1 MICKILIISVVVALTSAQDITLKAPSLAVNCGCQCSNYIFRDLRGITQGNCNSADQTGAKWCYVDRGHTCQDTRGSGRRDQFGRRRQISYEA 92
[Close]
BLAST of EMLSAG00000007123 vs. L. salmonis peptides
Match: EMLSAP00000007117 (pep:novel supercontig:LSalAtl2s:LSalAtl2s401:30551:49956:-1 gene:EMLSAG00000007117 transcript:EMLSAT00000007117 description:"maker-LSalAtl2s401-augustus-gene-0.12")

HSP 1 Score: 196.823 bits (499), Expect = 6.285e-63
Identity = 93/98 (94.90%), Postives = 94/98 (95.92%), Query Frame = 0 
Query:    1 MICKFLIISVVVALTSAQDITLKAPSLAVNCGCQCSNYIFRDLRGITQGNCNSADRTGAKWCYVDRGHTCQDTRGSGRNDQFGRRRQISYEACATPRC 98
            MICK LIISVVVALTSAQDITLKAPSLAVNCGCQCSNYIFRDLRGITQGNCNSAD+TGAKWCYVDRGHTCQDT GS RNDQFGRRRQISYEACATP C
Sbjct:   56 MICKILIISVVVALTSAQDITLKAPSLAVNCGCQCSNYIFRDLRGITQGNCNSADQTGAKWCYVDRGHTCQDTIGSARNDQFGRRRQISYEACATPNC 153

HSP 2 Score: 160.999 bits (406), Expect = 4.761e-49
Identity = 78/95 (82.11%), Postives = 83/95 (87.37%), Query Frame = 0 
Query:    8 ISVVVALTSAQDITLKAPSLAVNCGCQCSNYIFRDLRGITQGNCNSADRTGAKWCYVDRGHTCQDTRGSGRNDQFGRRRQISYEACATPRCGGGF 102
            IS     T   DITLKAPSLAVNCGCQCS YIF+D+RGITQGNCNSAD+TGAKWCYV+RG+TCQ TRGSGRN QFGRRRQISYEACATPRCGGG 
Sbjct:  143 ISYEACATPNCDITLKAPSLAVNCGCQCSIYIFQDVRGITQGNCNSADQTGAKWCYVNRGYTCQYTRGSGRNYQFGRRRQISYEACATPRCGGGL 237

HSP 3 Score: 103.219 bits (256), Expect = 5.945e-27
Identity = 49/54 (90.74%), Postives = 51/54 (94.44%), Query Frame = 0 
Query:    1 MICKFLIISVVVALTSAQDITLKAPSLAVNCGCQCSNYIFRDLRGITQGNCNSA 54
            MICK LIISVVV L SAQDITLKAPSLAVNCGCQCSNYIF+D+RGITQGNCNSA
Sbjct:    1 MICKILIISVVVVLASAQDITLKAPSLAVNCGCQCSNYIFQDVRGITQGNCNSA 54
[Close]
BLAST of EMLSAG00000007123 vs. L. salmonis peptides
Match: EMLSAP00000001015 (pep:novel supercontig:LSalAtl2s:LSalAtl2s116:786764:792986:-1 gene:EMLSAG00000001015 transcript:EMLSAT00000001015 description:"maker-LSalAtl2s116-augustus-gene-8.13")

HSP 1 Score: 174.481 bits (441), Expect = 2.038e-54
Identity = 83/98 (84.69%), Postives = 86/98 (87.76%), Query Frame = 0 
Query:    1 MICKFLIISVVVALTSAQDITLKAPSLAVNCGCQCSNYIFRDLRGITQGNCNSADRTGAKWCYVDRGHTCQDTRGSGRNDQFGRRRQISYEACATPRC 98
            MI K LI+S+ VA  SAQDITLKAPSLAVNCGCQCSNYIFRD  GITQGNCNSADRTGAKWCYV+RGHTCQDTR S R D FGR RQISYEACATPRC
Sbjct:    1 MISKILILSIFVAFGSAQDITLKAPSLAVNCGCQCSNYIFRDGNGITQGNCNSADRTGAKWCYVERGHTCQDTRRSXRRDNFGRLRQISYEACATPRC 98

HSP 2 Score: 87.4261 bits (215), Expect = 2.052e-21
Identity = 43/53 (81.13%), Postives = 45/53 (84.91%), Query Frame = 0 
Query:    1 MICKFLIISVVVALTSAQDITLKAPSLAVNCGCQCSNYIFRDLRGITQGNCNS 53
            MI K LI+S+ V   SAQDITLKAPSLAVNCGCQCSNYIFRD  GITQGNCNS
Sbjct:  172 MISKILILSIFVVFGSAQDITLKAPSLAVNCGCQCSNYIFRDGNGITQGNCNS 224
[Close]
BLAST of EMLSAG00000007123 vs. L. salmonis peptides
Match: EMLSAP00000001011 (pep:novel supercontig:LSalAtl2s:LSalAtl2s116:644091:644652:-1 gene:EMLSAG00000001011 transcript:EMLSAT00000001011 description:"maker-LSalAtl2s116-augustus-gene-6.17")

HSP 1 Score: 157.918 bits (398), Expect = 7.408e-49
Identity = 110/175 (62.86%), Postives = 118/175 (67.43%), Query Frame = 0 
Query:    1 MICKFLIISVVVALTSAQDITLKAPSLAVNCGCQCSNYIFRDLRGITQGNCNSADRTGAKWCYVDRGHTCQDTRGSGRNDQFGRRRQISYEACATPRCGGGFGGGFGGRFTNNNNNGFGGNTGFGGNTGFGGNAGFGNSGLSGLFRPSGTGSGISISNILKPRRTQSFSGSGVVL 175
            MI K LI+S+ VA  SAQDITLKAPSLAVNCGCQCSNYIFRD  GITQGNCNSADRTGAK+CYV+ G T QDTR SGR D FGR RQIS EACATPRCGGGF GGFG       N    GN    GN   G              RP+  G G+SISNILKPR  Q+   S +VL
Sbjct:    1 MISKILILSIFVAFGSAQDITLKAPSLAVNCGCQCSNYIFRDGNGITQGNCNSADRTGAKFCYVEPGXTXQDTRRSGRRDXFGRFRQISNEACATPRCGGGFLGGFGNNNNGFGNKNGFGNKNGFGNNNNGFGNKGFR-------RPN--GGGVSISNILKPRSNQN---SDIVL 163
[Close]
BLAST of EMLSAG00000007123 vs. L. salmonis peptides
Match: EMLSAP00000012322 (pep:novel supercontig:LSalAtl2s:LSalAtl2s8:1311290:1311781:1 gene:EMLSAG00000012322 transcript:EMLSAT00000012322 description:"augustus_masked-LSalAtl2s8-processed-gene-15.4")

HSP 1 Score: 124.405 bits (311), Expect = 8.740e-36
Identity = 62/106 (58.49%), Postives = 75/106 (70.75%), Query Frame = 0 
Query:    1 MICKFLIISVVVALTSAQDITLKAPSLAVNCGCQCSNYIFRDLRGITQGNCNSADRTGAKWCYVDRGHTCQDTRGSGRNDQFGRRRQISYEACATPRCGGGFGGGF 106
            MI K +++S +VA  ++Q ITLKAPSLA+NCGCQC ++IFRD  G TQGNC S DR+GA+WC+V  G+TC DT        F R R IS EACATPRCG  F  GF
Sbjct:    1 MIAKIILLSALVAYVTSQGITLKAPSLAINCGCQCDSFIFRDRFGQTQGNCRSTDRSGARWCFVRPGNTCTDT-------SFFRGRTISNEACATPRCGNIFPKGF 99
[Close]
BLAST of EMLSAG00000007123 vs. L. salmonis peptides
Match: EMLSAP00000006141 (pep:novel supercontig:LSalAtl2s:LSalAtl2s335:388935:390297:1 gene:EMLSAG00000006141 transcript:EMLSAT00000006141 description:"maker-LSalAtl2s335-snap-gene-4.14")

HSP 1 Score: 119.783 bits (299), Expect = 8.493e-34
Identity = 62/104 (59.62%), Postives = 72/104 (69.23%), Query Frame = 0 
Query:    1 MICKFLIISVVVALTSAQ--DITLKAPSLAVNCGCQCSNYIFRDLRGITQGNCNSADRTGAKWCYVDRGHTCQDTRGSGRNDQFGRRRQISYEACATPRCGGGF 102
            M  K  I+ VV A   AQ  DI LKA S   NCGCQC+NYIF+D  G TQGNCN+AD++GAKWCYV RG+TC D   S R D+ G+ R+IS EACATP C G F
Sbjct:    1 MYLKLGILLVVCACAIAQKNDIILKAASSRTNCGCQCNNYIFKDKYGRTQGNCNTADKSGAKWCYVSRGNTCNDVTYSSRKDERGQPRRISNEACATPVCNGRF 104
[Close]
BLAST of EMLSAG00000007123 vs. L. salmonis peptides
Match: EMLSAP00000006139 (pep:novel supercontig:LSalAtl2s:LSalAtl2s335:347119:354560:1 gene:EMLSAG00000006139 transcript:EMLSAT00000006139 description:"snap_masked-LSalAtl2s335-processed-gene-4.8")

HSP 1 Score: 119.398 bits (298), Expect = 1.011e-32
Identity = 58/94 (61.70%), Postives = 68/94 (72.34%), Query Frame = 0 
Query:   11 VVALTSAQ--DITLKAPSLAVNCGCQCSNYIFRDLRGITQGNCNSADRTGAKWCYVDRGHTCQDTRGSGRNDQFGRRRQISYEACATPRCGGGF 102
            ++A T AQ  DI LKA SL  NCGCQC+NYIF D  G TQGNCN+ D++GAKWCYV RG+TC D   S R D+ G+ R+IS EACATP C G F
Sbjct:   47 IIACTIAQKNDIKLKAASLQTNCGCQCNNYIFLDKYGKTQGNCNTVDKSGAKWCYVSRGNTCNDVTYSSRKDERGQPRRISNEACATPVCNGRF 140
[Close]
BLAST of EMLSAG00000007123 vs. L. salmonis peptides
Match: EMLSAP00000004889 (pep:novel supercontig:LSalAtl2s:LSalAtl2s257:179358:180381:1 gene:EMLSAG00000004889 transcript:EMLSAT00000004889 description:"maker-LSalAtl2s257-augustus-gene-1.12")

HSP 1 Score: 103.605 bits (257), Expect = 1.012e-28
Identity = 54/93 (58.06%), Postives = 63/93 (67.74%), Query Frame = 0 
Query:   11 VVALTSAQD-ITLKAPSLAVNCGCQCSNYIFRDLRGITQGNCNSADRTGAKWCYVDRGHTCQDTRGSGRNDQFGRRRQISYEACATPRCGGGF 102
            ++ L+SAQ+ I LKAPSL  NCGCQCS+  F D  G  QGNC SAD TGA+WCY+   HTC D + S R      R Q SYEACATPRCGG +
Sbjct:    1 MLTLSSAQNGIILKAPSLVQNCGCQCSSLTFADSYGRIQGNCRSADYTGARWCYIPFSHTCNDAQYSSR-----FRNQWSYEACATPRCGGLY 88
[Close]
BLAST of EMLSAG00000007123 vs. L. salmonis peptides
Match: EMLSAP00000002890 (pep:novel supercontig:LSalAtl2s:LSalAtl2s166:445712:450389:1 gene:EMLSAG00000002890 transcript:EMLSAT00000002890 description:"maker-LSalAtl2s166-augustus-gene-4.9")

HSP 1 Score: 97.0561 bits (240), Expect = 1.358e-25
Identity = 51/101 (50.50%), Postives = 66/101 (65.35%), Query Frame = 0 
Query:    1 MICKFLIISVVVALTSAQDIT---LKAPSLAVNCGCQCSNYIFRDLRGITQGNCNSADRTGAKWCYVDRGHTCQDTRGSGRNDQFGRRRQISYEACATPRC 98
            MI   LI ++V    S  ++T   L++PSL  NCGCQC++Y F D++G TQGNC S+D TG +WCYVD G+TC D   S R +      Q SYEAC+TPRC
Sbjct:    1 MIKIQLIKTLVCMFLSMLNLTQGQLRSPSLYQNCGCQCNSYTFSDIKGYTQGNCFSSDFTGGRWCYVDYGNTCHDAVPSLRYNG-----QWSYEACSTPRC 96
[Close]
BLAST of EMLSAG00000007123 vs. nr
Match: gi|155966135|gb|ABU41022.1| (hypothetical protein [Lepeophtheirus salmonis])

HSP 1 Score: 162.925 bits (411), Expect = 2.763e-48
Identity = 110/175 (62.86%), Postives = 120/175 (68.57%), Query Frame = 0 
Query:    1 MICKFLIISVVVALTSAQDITLKAPSLAVNCGCQCSNYIFRDLRGITQGNCNSADRTGAKWCYVDRGHTCQDTRGSGRNDQFGRRRQISYEACATPRCGGGFGGGFGGRFTNNNNNGFGGNTGFGGNTGFGGNAGFGNSGLSGLFRPSGTGSGISISNILKPRRTQSFSGSGVVL 175
            MI K LI+S+ VA  SAQDITLKAPSLAVNCGCQCSNYIFRD  GITQGNCNSADRTGAK+CYV+ G+TCQDTR SGR D FGR RQIS EACATPRCGGGF GGFG           G     G     G        G +G  RP+  G G+SISNILKPR  Q+   S +VL
Sbjct:    1 MISKILIVSIFVAFGSAQDITLKAPSLAVNCGCQCSNYIFRDGNGITQGNCNSADRTGAKFCYVEPGNTCQDTRRSGRRDNFGRFRQISNEACATPRCGGGFLGGFGNNNN-------GFGNNNGFGNNNGFGNNNNGFGNNGFRRPN--GGGVSISNILKPRSNQN---SDIVL 163
[Close]
BLAST of EMLSAG00000007123 vs. Tigriopus kingsejongenis genes
Match: maker-scaffold381_size190066-snap-gene-0.31 (protein:Tk01605 transcript:maker-scaffold381_size190066-snap-gene-0.31-mRNA-1 annotation:"hypothetical protein")

HSP 1 Score: 89.3521 bits (220), Expect = 7.663e-23
Identity = 64/168 (38.10%), Postives = 78/168 (46.43%), Query Frame = 0 
Query:   11 VVALTSAQ----------DITLKAPSLAVNCGCQCSNYIFRDLRGITQGNCNSADRTGAKWCYVDRGH--TCQDTRGS-GRNDQFGRRRQISYEACATPRCGGGFGGGFG--GRFTNNNNNGFGGNTGFGGNTGFGGNAGFGNSGLSGLFRPSGTGSGISISNILKPR 163
            ++AL S+Q          DI LKAPS  +NCGCQC  Y +RD  G  QGNC SAD T A WCY+      +C D R S  R D FGR R+ SYEAC+TP        GFG  G      N     N G   N G   +      G + L             +++KPR
Sbjct:   18 LLALVSSQITDTQVAESGDIVLKAPSNLINCGCQCDPYTWRDTLGRVQGNCRSADATKALWCYIPASAFTSCADIRQSRNRLDNFGRPRRWSYEACSTPALTSPICLGFGQGGLLQREPNKRPTRNNGRRPNRGGNNSGNGSGGGFNLL-------------DLIKPR 172
[Close]
BLAST of EMLSAG00000007123 vs. Tigriopus kingsejongenis genes
Match: maker-scaffold381_size190066-snap-gene-0.30 (protein:Tk01607 transcript:maker-scaffold381_size190066-snap-gene-0.30-mRNA-1 annotation:"hypothetical protein AN3340.2")

HSP 1 Score: 84.3445 bits (207), Expect = 4.756e-21
Identity = 62/191 (32.46%), Postives = 86/191 (45.03%), Query Frame = 0 
Query:    5 FLIISVVVALTS---AQD------------ITLKAPSLAVNCGCQCSNYIFRDLRGITQGNCNSADRTGAKWCYVDRGH-TCQDTRGS-GRNDQFGRRRQISYEACATPRCGGGF---GGGFGGRFTNNNNNGFGGNTGFGGNTGFGGNAGFGNSGLSGLFRPSGTGSGISISNILKPRRTQSFSGSGVVL 175
            F I+S V+ALT+   AQD            I  KAPS  V+C CQC NY ++       GNC SAD+T AKWCYVD+    C D + S  R D  G  R+ SY+AC+TP          G F     NNN+N  G       N    GN+ + +  L     P    +   + +++     +  + S   +
Sbjct:    4 FCILSTVLALTALTQAQDEAEDGVDTKSVEILQKAPSNQVSCNCQCDNYTYKGGDNQIHGNCFSADQTKAKWCYVDQYSGECDDIQYSKNRRDSHGNLRKWSYQACSTPERASHQCRNNGSFNS-VINNNSNRPGRRPTRRPNHNRPGNSNYNSGSLLASAGPGVRDAAADVEDVVNTSDLEDAADSSDAI 193
[Close]
BLAST of EMLSAG00000007123 vs. Tigriopus kingsejongenis genes
Match: maker-scaffold381_size190066-snap-gene-0.32 (protein:Tk01608 transcript:maker-scaffold381_size190066-snap-gene-0.32-mRNA-1 annotation:"---NA---")

HSP 1 Score: 77.7962 bits (190), Expect = 1.680e-18
Identity = 44/114 (38.60%), Postives = 62/114 (54.39%), Query Frame = 0 
Query:    5 FLIISVVVALTS-----------------AQDITLKAPSLAVNCGCQCSNYIFRDLRGITQGNCNSADRTGAKWCYVDR-GHTCQDTRGS-GRNDQFGRRRQISYEACATPRCG 99
            F I+S ++ALT+                 + +I  KAPS  V+C CQC NY ++       GNC +AD T  KWCY+D+  + C D + S  R D FG  R+ SY+AC+TP+ G
Sbjct:    4 FCILSTILALTALTKAQAEAEAEETIDTKSVEIIQKAPSNRVSCNCQCDNYTYKGDDNQIHGNCFTADHTRGKWCYLDQYNNDCDDIQYSKNRRDSFGNLREWSYQACSTPQLG 117
The following BLAST results are available for this feature:
BLAST of EMLSAG00000007123 vs. GO
Analysis Date: 2014-04-02 (Blast vs. GO)
Total hits: 0
Match NameE-valueIdentityDescription
back to top
BLAST of EMLSAG00000007123 vs. C. finmarchicus
Analysis Date: 2014-05-09 (TblastN vs C. finmarchicus TSA)
Total hits: 25
Match NameE-valueIdentityDescription
gi|592932378|gb|GAXK01026175.1|6.347e-1949.46TSA: Calanus finmarchicus comp18158_c1_seq5 transc... [more]
gi|592932381|gb|GAXK01026172.1|9.555e-1950.00TSA: Calanus finmarchicus comp18158_c1_seq2 transc... [more]
gi|592848675|gb|GAXK01108869.1|1.101e-1847.87TSA: Calanus finmarchicus comp296545_c0_seq2 trans... [more]
gi|592932380|gb|GAXK01026173.1|4.917e-1848.91TSA: Calanus finmarchicus comp18158_c1_seq3 transc... [more]
gi|592932382|gb|GAXK01026171.1|6.919e-1848.91TSA: Calanus finmarchicus comp18158_c1_seq1 transc... [more]
gi|592848676|gb|GAXK01108868.1|1.049e-1750.00TSA: Calanus finmarchicus comp296545_c0_seq1 trans... [more]
gi|592932367|gb|GAXK01026186.1|1.722e-1746.67TSA: Calanus finmarchicus comp18158_c2_seq11 trans... [more]
gi|592932369|gb|GAXK01026184.1|1.935e-1746.67TSA: Calanus finmarchicus comp18158_c2_seq9 transc... [more]
gi|592772445|gb|GAXK01182123.1|2.427e-1747.47TSA: Calanus finmarchicus comp899023_c0_seq1 trans... [more]
gi|592932379|gb|GAXK01026174.1|1.988e-1653.33TSA: Calanus finmarchicus comp18158_c1_seq4 transc... [more]

Pages

back to top
BLAST of EMLSAG00000007123 vs. L. salmonis peptides
Analysis Date: 2014-05-10 (Blastp vs. self)
Total hits: 20
Match NameE-valueIdentityDescription
EMLSAP000000071235.626e-122100.00pep:novel supercontig:LSalAtl2s:LSalAtl2s401:84241... [more]
EMLSAP000000071229.064e-6798.98pep:novel supercontig:LSalAtl2s:LSalAtl2s401:64891... [more]
EMLSAP000000071176.285e-6394.90pep:novel supercontig:LSalAtl2s:LSalAtl2s401:30551... [more]
EMLSAP000000010152.038e-5484.69pep:novel supercontig:LSalAtl2s:LSalAtl2s116:78676... [more]
EMLSAP000000010117.408e-4962.86pep:novel supercontig:LSalAtl2s:LSalAtl2s116:64409... [more]
EMLSAP000000123228.740e-3658.49pep:novel supercontig:LSalAtl2s:LSalAtl2s8:1311290... [more]
EMLSAP000000061418.493e-3459.62pep:novel supercontig:LSalAtl2s:LSalAtl2s335:38893... [more]
EMLSAP000000061391.011e-3261.70pep:novel supercontig:LSalAtl2s:LSalAtl2s335:34711... [more]
EMLSAP000000048891.012e-2858.06pep:novel supercontig:LSalAtl2s:LSalAtl2s257:17935... [more]
EMLSAP000000028901.358e-2550.50pep:novel supercontig:LSalAtl2s:LSalAtl2s166:44571... [more]

Pages

back to top
BLAST of EMLSAG00000007123 vs. SwissProt
Analysis Date: 2017-02-10 (Blastp vs. SwissProt)
Total hits: 0
Match NameE-valueIdentityDescription
back to top
BLAST of EMLSAG00000007123 vs. Select Arthropod Genomes
Analysis Date: 2017-02-20 (Blastp vs. Selected Arthropods)
Total hits: 0
Match NameE-valueIdentityDescription
back to top
BLAST of EMLSAG00000007123 vs. nr
Analysis Date: 2017-02-20 (Blastp vs. NR (2/2017))
Total hits: 1
Match NameE-valueIdentityDescription
gi|155966135|gb|ABU41022.1|2.763e-4862.86hypothetical protein [Lepeophtheirus salmonis][more]
back to top
BLAST of EMLSAG00000007123 vs. Tigriopus kingsejongenis genes
Analysis Date: 2018-04-18 (Blastp vs. Tigriopus kingsejongensis proteins)
Total hits: 3
Match NameE-valueIdentityDescription
maker-scaffold381_size190066-snap-gene-0.317.663e-2338.10protein:Tk01605 transcript:maker-scaffold381_size1... [more]
maker-scaffold381_size190066-snap-gene-0.304.756e-2132.46protein:Tk01607 transcript:maker-scaffold381_size1... [more]
maker-scaffold381_size190066-snap-gene-0.321.680e-1838.60protein:Tk01608 transcript:maker-scaffold381_size1... [more]
back to top
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
LSalAtl2s401supercontigLSalAtl2s401:84241..84844 -
Analyses
This gene is derived from or has results from the following analyses
Analysis NameDate Performed
ensembl2013-09-26 .965016
Blast vs. GO2014-04-02
TblastN vs C. finmarchicus TSA2014-05-09
Blastp vs. self2014-05-10
Blastp vs. SwissProt2017-02-10
Blastp vs. Selected Arthropods2017-02-20
Blastp vs. NR (2/2017)2017-02-20
Blastp vs. Tigriopus kingsejongensis proteins2018-04-18
Properties
Property NameValue
Logic nameensemblgenomes
Descriptionmaker-LSalAtl2s401-augustus-gene-0.14
Biotypeprotein_coding
EvidenceIEA
Notehypothetical protein [Lepeophtheirus salmonis]
Cross References
External references for this gene
DatabaseAccession
Ensembl Metazoa (gene)EMLSAG00000007123 (primary cross-reference)
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameSpeciesType
EMLSAT00000007123EMLSAT00000007123-702970Lepeophtheirus salmonismRNA


Sequences
The following sequences are available for this feature:

gene from alignment at LSalAtl2s401:84241..84844-

Legend: mRNA
Hold the cursor over a type above to highlight its positions in the sequence below.
>EMLSAG00000007123-689889 ID=EMLSAG00000007123-689889|Name=EMLSAG00000007123|organism=Lepeophtheirus salmonis|type=gene|length=604bp|location=Sequence derived from alignment at LSalAtl2s401:84241..84844- (Lepeophtheirus salmonis)
ATGATTTGCAAATTCTTAATTATATCCGTTGTTGTGGCATTAACATCAGC
TCAAGACATTACGCTCAAAGCACCTTCCCTAGCTGTTAATTGTGGATGTC
AATGCTCCAACTACATTTTCCGAGATTTGAGAGGAATAACGCAAGGAAAC
TGCAATTCGTAAGTTCAACAACCCTTTCTTCATATTAATTATAAATCAGT
TTTAATTCAATATATATTTTATTCATAAATACAGAGCCGATCGAACTGGA
GCTAAATGGTGCTATGTTGATCGTGGTCACACTTGTCAAGATACCAGAGG
ATCAGGAAGAAACGATCAATTCGGAAGACGTCGTCAAATTTCATATGAAG
CCTGTGCAACTCCTAGATGTGGTGGAGGATTCGGTGGTGGATTTGGTGGC
AGATTTACCAATAACAACAACAATGGTTTCGGAGGCAACACTGGATTTGG
AGGAAACACTGGATTCGGAGGCAACGCTGGATTTGGCAACAGTGGTCTAA
GTGGATTGTTTAGGCCATCGGGCACTGGTAGTGGGATCAGTATTTCCAAC
ATCTTGAAACCAAGAAGGACCCAATCTTTTTCCGGCTCTGGCGTTGTTCT
ATAA
back to top
Add to Basket