EMLSAG00000012083, EMLSAG00000012083-694849 (gene) Lepeophtheirus salmonis

Overview
NameEMLSAG00000012083
Unique NameEMLSAG00000012083-694849
Typegene
OrganismLepeophtheirus salmonis (salmon louse)
Associated RNAi Experiments

Nothing found

Homology
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BLAST of EMLSAG00000012083 vs. C. finmarchicus
Match: gi|592858052|gb|GAXK01099510.1| (TSA: Calanus finmarchicus comp446632_c0_seq1 transcribed RNA sequence)

HSP 1 Score: 56.225 bits (134), Expect = 6.631e-9
Identity = 28/82 (34.15%), Postives = 50/82 (60.98%), Query Frame = 0 
Query:  101 RDFSDCAKKLVCEVNGL---SRXXXXXXXXXXXXLFNADSLDLSKATVEFDLAAQIGKRVGKEQCAVIYERCPHNRQKLMKI 179
            +D  DC+K+LVCE+N +    +   + E  +  A  N+  LD+ K ++EFD+AA +G+ VG  +C + Y RC    Q+++++
Sbjct:  434 KDQDDCSKRLVCELNAMRSNGQVLSQHEEVLANAFGNSGELDVGKNSLEFDIAAVLGREVGMRRCELSYRRCETPVQQMLRM 679
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BLAST of EMLSAG00000012083 vs. C. finmarchicus
Match: gi|592926123|gb|GAXK01032308.1| (TSA: Calanus finmarchicus comp21077_c1_seq1 transcribed RNA sequence)

HSP 1 Score: 55.8398 bits (133), Expect = 7.507e-9
Identity = 39/121 (32.23%), Postives = 58/121 (47.93%), Query Frame = 0 
Query:   83 RGKRSAIDLESL-----------------LLSASQRDFSDCAKKLVCEV-----NGLSRXXXXXXXXXXXXLFNADSLDLSKATVEFDLAAQIGKRVGKEQCAVIYERCPHNRQKLMKIFR 181
            RGKRSA  LE L                     ++ D   C KKL+CE+     +G+S      E  +     +   +D+S  TVEFDLAAQIG  +G+ +C  +Y RC  + + ++K+ R
Sbjct:  144 RGKRSADQLEELHRMKRDIDENGFNMNDWYRDMTEMDQDSCGKKLICELRSKEASGVS--MSADEKLIAEKFGSGKQVDVSDITVEFDLAAQIGLNMGEARCGQLYNRCDTSTEDMVKMIR 500
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BLAST of EMLSAG00000012083 vs. C. finmarchicus
Match: gi|592835767|gb|GAXK01121777.1| (TSA: Calanus finmarchicus comp107205_c3_seq2 transcribed RNA sequence)

HSP 1 Score: 54.6842 bits (130), Expect = 2.034e-8
Identity = 28/82 (34.15%), Postives = 49/82 (59.76%), Query Frame = 0 
Query:  101 RDFSDCAKKLVCEVNGL---SRXXXXXXXXXXXXLFNADSLDLSKATVEFDLAAQIGKRVGKEQCAVIYERCPHNRQKLMKI 179
            +D  DC+K+LVCE+N +    +   E E  +  A  N+  LD+ K ++EFD+AA +G+ VG  +C + Y RC     +++++
Sbjct:   79 KDQDDCSKRLVCELNAMRSDGQELSEHEEVLANAFGNSGELDIGKDSLEFDMAAVLGREVGARRCELSYRRCETPVSQMLRM 324
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BLAST of EMLSAG00000012083 vs. C. finmarchicus
Match: gi|592835768|gb|GAXK01121776.1| (TSA: Calanus finmarchicus comp107205_c3_seq1 transcribed RNA sequence)

HSP 1 Score: 54.6842 bits (130), Expect = 2.358e-8
Identity = 28/82 (34.15%), Postives = 49/82 (59.76%), Query Frame = 0 
Query:  101 RDFSDCAKKLVCEVNGL---SRXXXXXXXXXXXXLFNADSLDLSKATVEFDLAAQIGKRVGKEQCAVIYERCPHNRQKLMKI 179
            +D  DC+K+LVCE+N +    +   E E  +  A  N+  LD+ K ++EFD+AA +G+ VG  +C + Y RC     +++++
Sbjct:  150 KDQDDCSKRLVCELNAMRSDGQELSEHEEVLANAFGNSGELDIGKDSLEFDMAAVLGREVGARRCELSYRRCETPVSQMLRM 395
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BLAST of EMLSAG00000012083 vs. C. finmarchicus
Match: gi|592830700|gb|GAXK01126844.1| (TSA: Calanus finmarchicus comp47414_c0_seq3 transcribed RNA sequence)

HSP 1 Score: 46.2098 bits (108), Expect = 3.678e-6
Identity = 25/83 (30.12%), Postives = 48/83 (57.83%), Query Frame = 0 
Query:  101 RDFSDCAKKLVCEVNGL---SRXXXXXXXXXXXXLFNADSLDLSKATVEFDLAAQIGKRVGKEQCAVIYERCPHNRQKLMKIF 180
            +D  DC+K+L+CE+N      +   E+E  +  +    + +D++  T+EFDLAA +GK+ G  +C + + RC     +++K+ 
Sbjct:   19 KDQDDCSKRLLCELNAKQIEGKWLTENERIIANSFGQNNEIDIAAETLEFDLAAVLGKKGGSRRCELSFRRCETPVAQMVKMI 267
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BLAST of EMLSAG00000012083 vs. C. finmarchicus
Match: gi|592830701|gb|GAXK01126843.1| (TSA: Calanus finmarchicus comp47414_c0_seq2 transcribed RNA sequence)

HSP 1 Score: 46.9802 bits (110), Expect = 7.939e-6
Identity = 25/83 (30.12%), Postives = 48/83 (57.83%), Query Frame = 0 
Query:  101 RDFSDCAKKLVCEVNGL---SRXXXXXXXXXXXXLFNADSLDLSKATVEFDLAAQIGKRVGKEQCAVIYERCPHNRQKLMKIF 180
            +D  DC+K+L+CE+N      +   E+E  +  +    + +D++  T+EFDLAA +GK+ G  +C + + RC     +++K+ 
Sbjct:   19 KDQDDCSKRLLCELNAKQIEGKWLTENERIIANSFGQNNEIDIAAETLEFDLAAVLGKKGGSRRCELSFRRCETPVAQMVKMI 267
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BLAST of EMLSAG00000012083 vs. C. finmarchicus
Match: gi|592935479|gb|GAXK01023074.1| (TSA: Calanus finmarchicus comp114460_c1_seq1 transcribed RNA sequence)

HSP 1 Score: 46.9802 bits (110), Expect = 1.238e-5
Identity = 29/97 (29.90%), Postives = 46/97 (47.42%), Query Frame = 0 
Query:   83 RGKRSA----IDLESLLLSASQRDFSDCAKKLVCEVNGLSRXXXXXXXXXXXXLFNADSL--DLSKATVEFDLAAQIGKRV-GKEQCAVIYERCPHN 172
            RGKR      +D E +    S  D +DCAK+ VCE++   R  + ++     ++F    L    + A  E+D+A   G      E C  +Y++CP N
Sbjct:  542 RGKREVSGVKLDFEHVFQKISAMDVNDCAKRYVCEISATPRDHLSAQDISTLSMFGQHVLKSKTTSAKYEYDMAWARGNTAENAETCKNVYKKCPVN 832
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BLAST of EMLSAG00000012083 vs. C. finmarchicus
Match: gi|592830702|gb|GAXK01126842.1| (TSA: Calanus finmarchicus comp47414_c0_seq1 transcribed RNA sequence)

HSP 1 Score: 45.4394 bits (106), Expect = 4.061e-5
Identity = 25/72 (34.72%), Postives = 42/72 (58.33%), Query Frame = 0 
Query:  101 RDFSDCAKKLVCEVNGL---SRXXXXXXXXXXXXLFNADSLDLSKATVEFDLAAQIGKRVGKEQCAVIYERC 169
            +D  DC+K+L+CE+N      +   E+E  +  +    +++D+   T+EFDLAA +GK  G  +C + Y RC
Sbjct:  282 KDQDDCSKRLLCELNARKAEGQDLTENEQIIADSFGKNNNIDIGVETLEFDLAAVLGKEGGLRRCELSYRRC 497
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BLAST of EMLSAG00000012083 vs. C. finmarchicus
Match: gi|592854055|gb|GAXK01103489.1| (TSA: Calanus finmarchicus comp61937_c0_seq1 transcribed RNA sequence)

HSP 1 Score: 43.1282 bits (100), Expect = 2.650e-4
Identity = 34/104 (32.69%), Postives = 53/104 (50.96%), Query Frame = 0 
Query:   83 RGKRSA-----IDLESLLLSASQRDFSDCAKKLVCEVNGLSRXXXXXXXXXXXXLFN-ADSLDLSKATVEFDLAAQIGKRVGKEQ--CAVIYERCPHNRQKLMK 178
            R KR+A      D +SL    S  D   C K+LVCE+   + +E   E  ++ +LF    S++ + A  E+DLAA++G    K Q  C   Y  CP+   ++M+
Sbjct:  307 RQKRAASAALGPDPDSLFQLVSSMDLYSCGKQLVCELEAKADSERTPEDMLMISLFGKGKSVNPASAKAEYDLAAELG-MASKSQIVCRKRYSTCPYTADEMME 615
[Close]
BLAST of EMLSAG00000012083 vs. C. finmarchicus
Match: gi|592833102|gb|GAXK01124442.1| (TSA: Calanus finmarchicus comp24536_c0_seq1 transcribed RNA sequence)

HSP 1 Score: 42.743 bits (99), Expect = 3.484e-4
Identity = 36/111 (32.43%), Postives = 59/111 (53.15%), Query Frame = 0 
Query:   83 RGKRSAIDLESLLLSASQ----------RDFSDCAKKLVCEVNGLSRXXXXXXXXXXXXLF-NADSLDLSKATVEFDLAAQIGKRVGKEQ-CAVIYERCPHNRQKLMKIFR 181
            RGKRS +D ++  +S++Q           D +DC K LVCE+  +SR +++ +   I  LF + + +D S    E+ LAA +G     E  C   Y +CP + +++M I R
Sbjct:  274 RGKRS-VDEDAEKVSSAQFNDFFDVIAKSDVADCGKLLVCEL--MSRVDLDQDEKRIVNLFDDLEHIDPSSGRSEYQLAAYLGSLNQTEAICVRRYSKCPMSTEEVMDIVR 597
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BLAST of EMLSAG00000012083 vs. L. salmonis peptides
Match: EMLSAP00000012083 (pep:novel supercontig:LSalAtl2s:LSalAtl2s864:105123:106860:1 gene:EMLSAG00000012083 transcript:EMLSAT00000012083 description:"maker-LSalAtl2s864-augustus-gene-0.14")

HSP 1 Score: 377.481 bits (968), Expect = 1.919e-134
Identity = 189/189 (100.00%), Postives = 189/189 (100.00%), Query Frame = 0 
Query:    1 MHQWVSHFLWIYSTDLYYFNMNGFILTGAILASCLILSEATVFVVPAVAXAATLSIGGGALAGLALLKXAAIKGLVAGAIIGRGKRSAIDLESLLLSASQRDFSDCAKKLVCEVNGLSRAEIESEXAMIAALFNADSLDLSKATVEFDLAAQIGKRVGKEQCAVIYERCPHNRQKLMKIFRDPNLVSQS 189
            MHQWVSHFLWIYSTDLYYFNMNGFILTGAILASCLILSEATVFVVPAVAXAATLSIGGGALAGLALLKXAAIKGLVAGAIIGRGKRSAIDLESLLLSASQRDFSDCAKKLVCEVNGLSRAEIESEXAMIAALFNADSLDLSKATVEFDLAAQIGKRVGKEQCAVIYERCPHNRQKLMKIFRDPNLVSQS
Sbjct:    1 MHQWVSHFLWIYSTDLYYFNMNGFILTGAILASCLILSEATVFVVPAVAXAATLSIGGGALAGLALLKXAAIKGLVAGAIIGRGKRSAIDLESLLLSASQRDFSDCAKKLVCEVNGLSRAEIESEXAMIAALFNADSLDLSKATVEFDLAAQIGKRVGKEQCAVIYERCPHNRQKLMKIFRDPNLVSQS 189
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BLAST of EMLSAG00000012083 vs. L. salmonis peptides
Match: EMLSAP00000007339 (pep:novel supercontig:LSalAtl2s:LSalAtl2s414:6177:7412:1 gene:EMLSAG00000007339 transcript:EMLSAT00000007339 description:"snap_masked-LSalAtl2s414-processed-gene-0.6")

HSP 1 Score: 192.586 bits (488), Expect = 1.936e-61
Identity = 112/221 (50.68%), Postives = 138/221 (62.44%), Query Frame = 0 
Query:    1 MHQWVSHFLWIYSTDLYYFN-----MNGFILTGAILASCLILSEATVFVVPAVAXAATLSIGGGALAGLALLKXAAIKGLVAGAIIGR-------------------------------GKRSAIDLESLLLSASQRDFSDCAKKLVCEVNGLSRAEIESEXAMIAALFNADSLDLSKATVEFDLAAQIGKRVGKEQCAVIYERCPHNRQKLMKIFRDPNL 185
            M   VS   + Y   ++ F      M G  LT A +A+CL LS+AT+ ++PA      L+IGGGALAGLA+LK AAIKG + GA+I                                 GKRS  D ES+LLSASQ D SDCAKKLVCEV+GL+  +I SE  MIA LFN D LD++KATVEFDLAAQIGK VG +QC++IY+RCPH+R+KL+ IFRDP L
Sbjct:    1 MFLRVSTNYYKYRIYIFIFTVKKSIMKGTHLTLAFMATCLSLSQATL-ILPA------LTIGGGALAGLAILKVAAIKGGIIGALIAXGXGRGGRRGGRRGGGRGGRRGGRRGGSLRYFGKRSIDDFESVLLSASQHDASDCAKKLVCEVSGLTLEDINSEETMIARLFNPDHLDVTKATVEFDLAAQIGKHVGIQQCSIIYQRCPHSRRKLIDIFRDPRL 214
[Close]
BLAST of EMLSAG00000012083 vs. L. salmonis peptides
Match: EMLSAP00000012084 (pep:novel supercontig:LSalAtl2s:LSalAtl2s864:141096:141668:1 gene:EMLSAG00000012084 transcript:EMLSAT00000012084 description:"augustus_masked-LSalAtl2s864-processed-gene-0.1")

HSP 1 Score: 178.333 bits (451), Expect = 2.947e-56
Identity = 98/193 (50.78%), Postives = 121/193 (62.69%), Query Frame = 0 
Query:   21 MNGFILTGAILASCLILSEATVFVVPAVAXAATLSIGGGALAGLALLKXAAIKGLVAGAIIGRG----------------------------KRSAIDLESLLLSASQRDFSDCAKKLVCEVNGLSRAEIESEXAMIAALFNADSLDLSKATVEFDLAAQIGKRVGKEQCAVIYERCPHNRQKLMKIFRDPNL 185
            M   IL GA++ASC++LSEAT+ ++PA      L++G GAL GLAL+K AA K    G +I RG                            KRS  + E++LLSA+Q D SDCAK+LVCEVNG        E  MIA LFN D LD++K TVEFDLAAQIGKRVG EQCAV+YERCPH+++KLM+IF DP  
Sbjct:    1 MRAIILFGALMASCIVLSEATL-ILPA------LAVGKGALIGLALIKKAAFKVGFVGGLISRGGRRRNYRPRYHQNFGYNHRHHGFQNYRFKRSLDEYETILLSAAQNDASDCAKRLVCEVNGTPLENFSKEETMIARLFNPDHLDITKITVEFDLAAQIGKRVGIEQCAVLYERCPHDKKKLMEIFNDPTF 186
[Close]
BLAST of EMLSAG00000012083 vs. L. salmonis peptides
Match: EMLSAP00000012085 (pep:novel supercontig:LSalAtl2s:LSalAtl2s864:165170:165932:1 gene:EMLSAG00000012085 transcript:EMLSAT00000012085 description:"maker-LSalAtl2s864-augustus-gene-0.15")

HSP 1 Score: 163.696 bits (413), Expect = 1.336e-50
Identity = 104/180 (57.78%), Postives = 128/180 (71.11%), Query Frame = 0 
Query:   21 MNGFILTGAILASCLILSEATVFVVPAVAXAATLSIGGGALAGLALLKXAAIKGLVAGAIIGR---------------GKRSAIDLESLLLSASQRDFSDCAKKLVCEVNGLSRAEIESEXAMIAALFNADSLDLSKATVEFDLAAQIGKRVGKEQCAVIYERCPHNRQKLMKIFRDPNL 185
            M G  L  A +A C  L++AT+ ++PA+      +IGGGALAGLALLK  AIKG + GA+I R               GKRS  + ES+LLSASQ D SDCAKKLVCEV+GL+  ++ SE  MIA LFN D LD++KATVEFDLAAQIGKRVG +QC+VIYERCPH+R++L+ IFRDP L
Sbjct:    1 MRGTFLNIAFMAXCFSLTQATL-ILPAI------TIGGGALAGLALLKAXAIKGGIIGALIARGXGRGGRRGGRNRHYGKRSIDEFESVLLSASQHDASDCAKKLVCEVSGLTLEDMNSEETMIARLFNPDHLDVTKATVEFDLAAQIGKRVGIQQCSVIYERCPHSRRQLIDIFRDPRL 173
[Close]
BLAST of EMLSAG00000012083 vs. L. salmonis peptides
Match: EMLSAP00000007336 (pep:novel supercontig:LSalAtl2s:LSalAtl2s414:24152:55376:1 gene:EMLSAG00000007336 transcript:EMLSAT00000007336 description:"maker-LSalAtl2s414-augustus-gene-0.14")

HSP 1 Score: 127.487 bits (319), Expect = 8.133e-35
Identity = 59/110 (53.64%), Postives = 82/110 (74.55%), Query Frame = 0 
Query:   80 IIGRGKRSAIDLESLLLSASQRDFSDCAKKLVCEVNGLSRAEIESEXAMIAALFNADSLDLSKATVEFDLAAQIGKRVGKEQCAVIYERCPHNRQKLMKIFRDPNLVSQS 189
            ++ RGKR+  + E +LLS+SQ D +DC K+LVCE++ L    +  E   IA++FN++ LD+SKATVEF+LAAQIGKRVG EQC VIY+RCP+ R KLM+I+   N+  +S
Sbjct:  290 LLFRGKRAINEYEEILLSSSQEDQNDCTKRLVCEISSLPPTAMSPEEIQIASVFNSNYLDISKATVEFELAAQIGKRVGLEQCLVIYKRCPYPRAKLMEIYSKTNVEDES 399

HSP 2 Score: 125.176 bits (313), Expect = 5.262e-34
Identity = 62/105 (59.05%), Postives = 79/105 (75.24%), Query Frame = 0 
Query:   83 RGKRSAIDLESLLLSASQRDFSDCAKKLVCEVNGLSRAEIESEXAMIAALFNADSLDLSKATVEFDLAAQIGKRVGKEQCAVIYERCPHNRQKLMKIFRDPNLVS 187
            RGKR+  + E +LLSASQ D +DCAK+LVCE++ L    +  E   IA+ FN++ LD+SKATVEF+LAAQIGKRVG EQC+VIY+RCP  R KLM+I   P +VS
Sbjct:   94 RGKRAINEYEEILLSASQEDQNDCAKRLVCEISSLPPTAMSLEEVQIASAFNSNYLDISKATVEFELAAQIGKRVGLEQCSVIYKRCPFPRAKLMEI---PTIVS 195
[Close]
BLAST of EMLSAG00000012083 vs. L. salmonis peptides
Match: EMLSAP00000007341 (pep:novel supercontig:LSalAtl2s:LSalAtl2s414:99526:112093:-1 gene:EMLSAG00000007341 transcript:EMLSAT00000007341 description:"maker-LSalAtl2s414-snap-gene-1.9")

HSP 1 Score: 122.479 bits (306), Expect = 1.068e-34
Identity = 56/97 (57.73%), Postives = 76/97 (78.35%), Query Frame = 0 
Query:   93 SLLLSASQRDFSDCAKKLVCEVNGLSRAEIESEXAMIAALFNADSLDLSKATVEFDLAAQIGKRVGKEQCAVIYERCPHNRQKLMKIFRDPNLVSQS 189
             +LLSASQ D +DCAK+LVCE++ L    +  E   IA+ FN++ LD+SKATVEF+LAAQIGKRVG EQC VIY+RCPH++ KLM+I+++ N+  +S
Sbjct:   88 EILLSASQEDQNDCAKRLVCEISSLPPTAMSPEEIQIASAFNSNYLDISKATVEFELAAQIGKRVGLEQCLVIYKRCPHSKAKLMEIYKETNVEEES 184
[Close]
BLAST of EMLSAG00000012083 vs. L. salmonis peptides
Match: EMLSAP00000000512 (pep:novel supercontig:LSalAtl2s:LSalAtl2s107:493556:498566:1 gene:EMLSAG00000000512 transcript:EMLSAT00000000512 description:"maker-LSalAtl2s107-snap-gene-5.72")

HSP 1 Score: 76.2554 bits (186), Expect = 1.951e-17
Identity = 46/116 (39.66%), Postives = 63/116 (54.31%), Query Frame = 0 
Query:   76 VAGAIIG---RGKRSAID-------LESLLLSASQRDFSDCAKKLVCEVNGLSRAEIESEXAMIAALFNADSLDLSKATVEFDLAAQIGKRV-GKEQCAVIYERCPHNRQKLMKIF 180
            V GAIIG   R +R A +       L+S  L+ +  D  DC KK VCE+  L  ++  +E AMIA LF   SLD      E+DLAA +G+    K  CA  Y+RCP +R+ + + F
Sbjct:   70 VKGAIIGSLLRNRRDAEEHVNRLSALDSYFLAIADMDVDDCGKKYVCEIEILDPSQRTTEEAMIATLFGDASLDPVSPKAEYDLAAYLGQTTRSKHACARRYKRCPVDRKTISQAF 185
[Close]
BLAST of EMLSAG00000012083 vs. L. salmonis peptides
Match: EMLSAP00000003871 (pep:novel supercontig:LSalAtl2s:LSalAtl2s20:890516:891122:-1 gene:EMLSAG00000003871 transcript:EMLSAT00000003871 description:"maker-LSalAtl2s20-augustus-gene-8.8")

HSP 1 Score: 73.9442 bits (180), Expect = 1.052e-16
Identity = 54/172 (31.40%), Postives = 80/172 (46.51%), Query Frame = 0 
Query:   19 FNMNGFILTGAILASCLILSEATVFV--VPAVAXAATLSIGGGALAGLALLKXAAIKGLVAGAIIGRGKRSA--------IDLESLLLSASQRDFSDCAKKLVCEVNGLSRAEIESEXAMIAALF-NADSLDLSKATVEFDLAAQIGKRVGKEQCAVIYERCPHNRQKLMKI 179
            F ++   LT  +++S       T+ V     V  AA  ++G  ALAGLA+ K    + L+  A+  RGKR          +DL +   +  Q D SDC K LVCEV     +E++ E  +IA LF N        AT E+  AA +G     + C   Y  C    ++L+K+
Sbjct:    4 FTVSALFLTATVISSVYGFDPVTLTVGTXAYVLTAAQTTLGVAALAGLAIAK----EKLIISALSNRGKRDVSAVQEAKNVDLNAFFWAVGQADVSDCGKLLVCEVMATPTSELKREEELIANLFDNEGKFTADSATNEYQFAAYVGTLQQPQLCKERYATCTVPSKELLKV 171
[Close]
BLAST of EMLSAG00000012083 vs. L. salmonis peptides
Match: EMLSAP00000006935 (pep:novel supercontig:LSalAtl2s:LSalAtl2s393:562990:566673:1 gene:EMLSAG00000006935 transcript:EMLSAT00000006935 description:"augustus_masked-LSalAtl2s393-processed-gene-5.2")

HSP 1 Score: 49.2914 bits (116), Expect = 7.083e-8
Identity = 30/109 (27.52%), Postives = 52/109 (47.71%), Query Frame = 0 
Query:   73 KGLVAGAIIGRGKRSAIDLESLLLSASQRDFSDCAKKLVCEVNGLSRAEIESEXAMIAALFNADSLDLSKATVEFDLAAQIGKRVGKEQCAVIYERCPHNRQKLMKIFR 181
            K +   AI+    +    +E  L  +S +D S+C KKL+C ++ +   E   +  +IA   +   L      ++  LAA++G      QC  +Y RCP  + +LM + R
Sbjct:   48 KAVFTHAILPNDSQ----IEEELRESSVQDTSECIKKLICIIHSIPSPERTWDERIIAEAISP-KLVFKSQHIQLQLAARLG-YAQPSQCYDVYSRCPFEKHQLMTLIR 150
[Close]
BLAST of EMLSAG00000012083 vs. Tigriopus kingsejongenis genes
Match: maker-scaffold39_size501901-snap-gene-2.7 (protein:Tk00983 transcript:maker-scaffold39_size501901-snap-gene-2.7-mRNA-1 annotation:"glutamate ionotropic kainate 2")

HSP 1 Score: 85.8853 bits (211), Expect = 4.720e-20
Identity = 40/94 (42.55%), Postives = 58/94 (61.70%), Query Frame = 0 
Query:   91 LESLLLSASQRDFSDCAKKLVCEVNGLSRAEIESEXAMIAALF-NADSLDLSKATVEFDLAAQIGKRVGKEQCAVIYERCPHNRQKLMKIFRDP 183
            +E   L AS  D  DCAK LVC +N     ++  E  +IA +F   D +++SK++VEFDLAA +G++ G  QC  +Y RCPHN++ L+   R P
Sbjct:   80 IEDSFLQASLVDADDCAKMLVCLINSAPAEDLSEEEEIIAEMFGQNDEINVSKSSVEFDLAALVGRKAGASQCKSLYARCPHNQKYLIDTLRSP 173

HSP 2 Score: 77.7962 bits (190), Expect = 3.150e-17
Identity = 38/91 (41.76%), Postives = 58/91 (63.74%), Query Frame = 0 
Query:   91 LESLLLSASQRDFSDCAKKLVCEVNGLSRAEI-ESEXAMIAALFNADSLDLSKATVEFDLAAQIGKRVGKEQCAVIYERCPHNRQKLMKIF 180
            +E   L+AS  D  DCAKK+VC V    +  + + E A++     ++ +D+SK++VEFDLAA +G++VG  QC  +Y RCPH+   L+ IF
Sbjct:  252 VEDAFLAASVDDADDCAKKMVCMVYAKDQESLTDVEQALVEMFGQSEVIDVSKSSVEFDLAALVGRKVGSLQCKSVYARCPHHEDFLVGIF 342
[Close]
BLAST of EMLSAG00000012083 vs. Tigriopus kingsejongenis genes
Match: maker-scaffold316_size209483-snap-gene-1.38 (protein:Tk05941 transcript:maker-scaffold316_size209483-snap-gene-1.38-mRNA-1 annotation:"PREDICTED: uncharacterized protein LOC103505216")

HSP 1 Score: 63.929 bits (154), Expect = 3.484e-13
Identity = 32/87 (36.78%), Postives = 54/87 (62.07%), Query Frame = 0 
Query:   95 LLSASQRDFSDCAKKLVCEVNGLSRAEIESEXAMIAALFNADSLDLSKATVEFDLAAQIGKRVGKEQCAVIYERCPHNRQKLMKIFR 181
            L SAS +D +DCAK+L+CE+   S+ E++ +  +I        LD +   ++F LAA +G++   EQC+++Y RC  N + +MK+ R
Sbjct:   65 LQSASIQDSTDCAKRLICELK--SKKELDWDEELIMQTIPP-QLDYASPIIQFQLAADLGQK-NPEQCSIVYSRCHFNGEDIMKLMR 147
[Close]
BLAST of EMLSAG00000012083 vs. Tigriopus kingsejongenis genes
Match: maker-scaffold559_size137194-snap-gene-0.28 (protein:Tk04624 transcript:maker-scaffold559_size137194-snap-gene-0.28-mRNA-1 annotation:"hypothetical protein")

HSP 1 Score: 58.151 bits (139), Expect = 4.245e-11
Identity = 32/89 (35.96%), Postives = 48/89 (53.93%), Query Frame = 0 
Query:   95 LLSASQRDFSDCAKKLVCEVNGLSRAE-IESEXAMI-AALFNADS---LDLSKATVEFDLAAQIGKRVGKEQCAVIYERCPHNRQKLMK 178
            L +ASQ D   C KK++C VN     + +  E + I   +F  D    LD +   V+ DLAA+IGK  G + C +IY RC  + Q+++ 
Sbjct:   67 LRTASQLDIDSCMKKMICSVNDPKADDYVPDENSNIFQEVFGGDDNSQLDYASKIVDLDLAAEIGKNAGADHCGLIYSRCTKSTQEILN 155
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BLAST of EMLSAG00000012083 vs. Tigriopus kingsejongenis genes
Match: maker-scaffold197_size267318-snap-gene-1.35 (protein:Tk09461 transcript:maker-scaffold197_size267318-snap-gene-1.35-mRNA-1 annotation:"hypothetical protein")

HSP 1 Score: 55.8398 bits (133), Expect = 4.700e-10
Identity = 49/183 (26.78%), Postives = 84/183 (45.90%), Query Frame = 0 
Query:   36 ILSEATVFVVPAVA-XAATLSIGGGALAGLALLKXAAIKGLVAGAIIGRG----------------------KRSAIDL-----ESLLLSASQRDFSDCAKKLVCEVNGLSRAEIESEXAMIAALF---NADSLDLSKATVEFDLAAQIGKRVGKEQ--CAVIYERCPHNRQKLMKIFRDPNL 185
            IL+   +  +P +A  A TL+     LA L L+K  A   L+AG  +  G                      +R + D+     ++L    S  D   C K+LVCE+      +++ + ++I +LF       L+++ A  E++LAAQ+G+ + K Q  C   Y  CP+   ++MK  R+ N+
Sbjct:   52 ILANNGILTIPLLAATAGTLAT---PLAVLGLIKLGA-AALIAGGFVALGSLRGRNNDDEEVYHESSSGYHRRRRSADIAAPNPDALFALISSMDTHGCGKQLVCELEAKDARQLQGDESLILSLFGDKQKKGLNVASAKAEYELAAQLGQ-ITKSQVMCRQRYTTCPYTGTEMMKALRESNI 229
The following BLAST results are available for this feature:
BLAST of EMLSAG00000012083 vs. GO
Analysis Date: 2014-04-02 (Blast vs. GO)
Total hits: 0
Match NameE-valueIdentityDescription
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BLAST of EMLSAG00000012083 vs. C. finmarchicus
Analysis Date: 2014-05-09 (TblastN vs C. finmarchicus TSA)
Total hits: 22
Match NameE-valueIdentityDescription
gi|592858052|gb|GAXK01099510.1|6.631e-934.15TSA: Calanus finmarchicus comp446632_c0_seq1 trans... [more]
gi|592926123|gb|GAXK01032308.1|7.507e-932.23TSA: Calanus finmarchicus comp21077_c1_seq1 transc... [more]
gi|592835767|gb|GAXK01121777.1|2.034e-834.15TSA: Calanus finmarchicus comp107205_c3_seq2 trans... [more]
gi|592835768|gb|GAXK01121776.1|2.358e-834.15TSA: Calanus finmarchicus comp107205_c3_seq1 trans... [more]
gi|592830700|gb|GAXK01126844.1|3.678e-630.12TSA: Calanus finmarchicus comp47414_c0_seq3 transc... [more]
gi|592830701|gb|GAXK01126843.1|7.939e-630.12TSA: Calanus finmarchicus comp47414_c0_seq2 transc... [more]
gi|592935479|gb|GAXK01023074.1|1.238e-529.90TSA: Calanus finmarchicus comp114460_c1_seq1 trans... [more]
gi|592830702|gb|GAXK01126842.1|4.061e-534.72TSA: Calanus finmarchicus comp47414_c0_seq1 transc... [more]
gi|592854055|gb|GAXK01103489.1|2.650e-432.69TSA: Calanus finmarchicus comp61937_c0_seq1 transc... [more]
gi|592833102|gb|GAXK01124442.1|3.484e-432.43TSA: Calanus finmarchicus comp24536_c0_seq1 transc... [more]

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BLAST of EMLSAG00000012083 vs. L. salmonis peptides
Analysis Date: 2014-05-10 (Blastp vs. self)
Total hits: 9
Match NameE-valueIdentityDescription
EMLSAP000000120831.919e-134100.00pep:novel supercontig:LSalAtl2s:LSalAtl2s864:10512... [more]
EMLSAP000000073391.936e-6150.68pep:novel supercontig:LSalAtl2s:LSalAtl2s414:6177:... [more]
EMLSAP000000120842.947e-5650.78pep:novel supercontig:LSalAtl2s:LSalAtl2s864:14109... [more]
EMLSAP000000120851.336e-5057.78pep:novel supercontig:LSalAtl2s:LSalAtl2s864:16517... [more]
EMLSAP000000073368.133e-3553.64pep:novel supercontig:LSalAtl2s:LSalAtl2s414:24152... [more]
EMLSAP000000073411.068e-3457.73pep:novel supercontig:LSalAtl2s:LSalAtl2s414:99526... [more]
EMLSAP000000005121.951e-1739.66pep:novel supercontig:LSalAtl2s:LSalAtl2s107:49355... [more]
EMLSAP000000038711.052e-1631.40pep:novel supercontig:LSalAtl2s:LSalAtl2s20:890516... [more]
EMLSAP000000069357.083e-827.52pep:novel supercontig:LSalAtl2s:LSalAtl2s393:56299... [more]
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BLAST of EMLSAG00000012083 vs. SwissProt
Analysis Date: 2017-02-10 (Blastp vs. SwissProt)
Total hits: 0
Match NameE-valueIdentityDescription
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BLAST of EMLSAG00000012083 vs. Select Arthropod Genomes
Analysis Date: 2017-02-20 (Blastp vs. Selected Arthropods)
Total hits: 0
Match NameE-valueIdentityDescription
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BLAST of EMLSAG00000012083 vs. nr
Analysis Date: 2017-02-20 (Blastp vs. NR (2/2017))
Total hits: 0
Match NameE-valueIdentityDescription
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BLAST of EMLSAG00000012083 vs. Tigriopus kingsejongenis genes
Analysis Date: 2018-04-18 (Blastp vs. Tigriopus kingsejongensis proteins)
Total hits: 4
Match NameE-valueIdentityDescription
maker-scaffold39_size501901-snap-gene-2.74.720e-2042.55protein:Tk00983 transcript:maker-scaffold39_size50... [more]
maker-scaffold316_size209483-snap-gene-1.383.484e-1336.78protein:Tk05941 transcript:maker-scaffold316_size2... [more]
maker-scaffold559_size137194-snap-gene-0.284.245e-1135.96protein:Tk04624 transcript:maker-scaffold559_size1... [more]
maker-scaffold197_size267318-snap-gene-1.354.700e-1026.78protein:Tk09461 transcript:maker-scaffold197_size2... [more]
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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
LSalAtl2s864supercontigLSalAtl2s864:105123..106860 +
Analyses
This gene is derived from or has results from the following analyses
Analysis NameDate Performed
ensembl2013-09-26 .965016
Blast vs. GO2014-04-02
TblastN vs C. finmarchicus TSA2014-05-09
Blastp vs. self2014-05-10
Blastp vs. SwissProt2017-02-10
Blastp vs. Selected Arthropods2017-02-20
Blastp vs. NR (2/2017)2017-02-20
Blastp vs. Tigriopus kingsejongensis proteins2018-04-18
Properties
Property NameValue
Logic nameensemblgenomes
Descriptionmaker-LSalAtl2s864-augustus-gene-0.14
Biotypeprotein_coding
EvidenceIEA
NoteHypothetical protein
Cross References
External references for this gene
DatabaseAccession
Ensembl Metazoa (gene)EMLSAG00000012083 (primary cross-reference)
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameSpeciesType
EMLSAT00000012083EMLSAT00000012083-707930Lepeophtheirus salmonismRNA


Sequences
The following sequences are available for this feature:

gene from alignment at LSalAtl2s864:105123..106860+

Legend: mRNA
Hold the cursor over a type above to highlight its positions in the sequence below.
>EMLSAG00000012083-694849 ID=EMLSAG00000012083-694849|Name=EMLSAG00000012083|organism=Lepeophtheirus salmonis|type=gene|length=1738bp|location=Sequence derived from alignment at LSalAtl2s864:105123..106860+ (Lepeophtheirus salmonis)
GTTGCAACTAGTACAACATTATTTAGATACCATTAGCGCGTCATTGCTGA
GCCTGGATATTGACCTCTCCTCAACCATACGATACAATGCAAACTCAAGG
GGATTTATATCAAGTGAAGAGGAAGGATCCAAATGGTTTAGTTACACAAG
TCCTCTAAGTTGTATTTGCACCCTTCTTTTACTTCATTTGCATTGGGAAC
TCGGCACAAAAAATGTATTCAATACTCTAAATTTGATTATGTTAAAGTTA
ATGGTACTTTAATTTCGGAGAAGCCTGTATATGCTTAAGGGAGGACACCT
ATACACATACTTTGAGATGAATCATTTATCAAAGAGACACATGACTTTTA
TTCAAGAATACCTCCACCCATTTCGGATAGGGAATAAAAGATACAGAATG
TTTGATTTTGTTTTTGCTCAGTAACCCTACCTAAAATGATTTTTTCGAGT
AGCATTAATTGAATAAATTACTTCATATCGGTTATTTCATGTTATCACCT
TAATGTACCTATGTTTGAGTGTCTTTGGTTTTACAATTTTATTTGTCATC
CCATCTTTAAATGATATCAACATCCTTGTGTGGACTGGTTTCAGTCTACG
CATTTTTAATACAAGTAACGGAAAAAGAGTGCGTAAGTTGTGTACGTACA
CTGAAGGGATTCATTAAGTATTTAAAAAAATCATGAAGTATAAATACGGC
TGAGATGCATCAATGGGTATCACACTTTCTTTGGATTTATTCAACTGGTA
AGAACATTAAGAGTTCATCCAAAAAATACTTAATATCATTTGTTTATCTA
ACTATACTAAACTTACTTTTCCAGATCTATACTACTTCAATATGAACGGA
TTTATCTTGACTGGAGCCATTTTGGCTAGCTGCTTGATTCTTTCCGAAGC
AACCGTCTTCGTTGTTCCTGCTGTCGCTKCCGCCGCAACCCTGAGTATTG
GAGGTGGTGCTCTGGCTGGACTCGCTCTCTTGAAGGMTGCTGCCATCAAG
GGGCTTGTTGCTGGAGCAATCATTGGMCGTGGAAAGAGATCTGCCATTGA
CTTGGAATCTCTTCTTTTGTCTGCTTCTCAACGGGACTTTTCTGACTGCG
CCAAGAAATTGGTCTGTGAAGTGAATGGTTTGTCCCGAGCTGAAATTGAA
TCTGAAYAAGCCATGATCGCTGCCTTGTTTAATGCTGATTCCTTGGACCT
CTCCAAGGCTACCGTTGAATTTGATCTTGCTGCTCAAATCGGCAAGCGTG
TAGGAAAGGAACAATGTGCTGTCATCTACGAACGTTGCCCTCATAATAGA
CAAAAGTTGATGAAGATCTTCAGAGATCCCAACTTGGTCAGTCAATCTTA
AATGATTCTTCAAGTTACCTCTTCAACTTTTGTTTAAAAAAGTATGATCC
AAATCCAAAGAAAAACATCTTAATAATCAAAAAATTATATTTTAGTACAG
ATTTTATATAAAGAAATAAATAAAAAAAAAATCTTTTTGACACGAATTCA
AAATATTATTTTATTTAGTAAAAAAAACAAAATGTCTAACCTAATCTTAA
TCTCACTATCTACTAAAAGTTCAGTTCGACTTTATATTTACTCATATTTT
AGTAAATGATAAGGTAGAGGATTAGCTCATCTTCTACGATCAAAGTCATT
CAAAATAGAATTTAATTGTAAATTTACCCTGTGGGCTCCTCACAATGATG
AAATAGATGCGTCGATCACTTTAATACCTTACTCACAA
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