EMLSAG00000012209, EMLSAG00000012209-694975 (gene) Lepeophtheirus salmonis

Overview


Name	EMLSAG00000012209
Unique Name	EMLSAG00000012209-694975
Type	gene
Organism	Lepeophtheirus salmonis (salmon louse)

Associated RNAi Experiments

Nothing found

Homology

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BLAST of EMLSAG00000012209 vs. C. finmarchicus
Match: gi|592880591|gb|GAXK01077310.1| (TSA: Calanus finmarchicus comp4402501_c0_seq1 transcribed RNA sequence)

HSP 1 Score: 34.2686 bits (77), Expect = 8.430e-2
Identity = 29/93 (31.18%), Postives = 42/93 (45.16%), Query Frame = 0

Query:   57 CPKSCGIC--------DECEDLISIEFCESIKNRCNTDASVRYSCRKTCDLCKSNCNNAYYDDTVCEEYQARETCDDELRSTKMKEMCKKTCN 141
            CPKSCG+C        + C +L S   C  +   CN  A V+ +C+K+C  C  + NN     + C +Y      +      +  E CKKTC 
Sbjct:  160 CPKSCGLCAGMTPHESNTCYNLWS--NCNQLTGYCN-QARVKKNCKKSCQACGGDANNEPAPSS-CSDYWNNCRENAAYYCPRWPESCKKTCG 426

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BLAST of EMLSAG00000012209 vs. C. finmarchicus
Match: gi|592947882|gb|GAXK01010671.1| (TSA: Calanus finmarchicus comp2643362_c0_seq1 transcribed RNA sequence)

HSP 1 Score: 32.7278 bits (73), Expect = 2.713e-1
Identity = 19/51 (37.25%), Postives = 27/51 (52.94%), Query Frame = 0

Query:   15 CLFHQCFGILSNTTCEDTDEPYCHSSIGSSKESCFDAAFQYTCPKSCGICD 65
            C+ ++ F + +NT    T  PY H  I S+ ES FD+ F Y C     IC+
Sbjct:    5 CVLNKYFPVQANTL--TTFNPYFHEFIISNPESFFDSLFIYCCKNIARICE 151

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BLAST of EMLSAG00000012209 vs. C. finmarchicus
Match: gi|592882706|gb|GAXK01075669.1| (TSA: Calanus finmarchicus comp6611765_c0_seq1 transcribed RNA sequence)

HSP 1 Score: 31.5722 bits (70), Expect = 4.461e-1
Identity = 20/70 (28.57%), Postives = 29/70 (41.43%), Query Frame = 0

Query:   52 AFQYTCPKSCGICDECEDLISIEFCESIKNRCNTDASVRYSCRKTCDLCKSNCNNAYYDDTVCEEYQARE 121
            A+ Y      G CD CED   I       +RC T      SC ++  +CK +         +CE Y+ +E
Sbjct:   91 AYHYKIKDDYGYCDHCEDTPWINRPSWGYHRCRTKDRGWESCDRSSPICKVHSKGK-----LCEHYKPKE 285

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BLAST of EMLSAG00000012209 vs. C. finmarchicus
Match: gi|592817908|gb|GAXK01136660.1| (TSA: Calanus finmarchicus comp1320777_c0_seq1 transcribed RNA sequence)

HSP 1 Score: 31.187 bits (69), Expect = 1.574e+0
Identity = 19/51 (37.25%), Postives = 26/51 (50.98%), Query Frame = 0

Query:   31 DTDEPYCHSSIGSSKESCFDAAFQYTCPKSCGICDECEDLISIEFCESIKN 81
            D D    HSS+G+S   CFD +F  + P   G+ D  E +  I   E I+N
Sbjct: 1608 DKDVSEYHSSLGNSDSFCFDCSFPASFPTIVGVSD*TEHIGHI--YEEIRN 1754

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BLAST of EMLSAG00000012209 vs. C. finmarchicus
Match: gi|592880424|gb|GAXK01077477.1| (TSA: Calanus finmarchicus comp427153_c0_seq1 transcribed RNA sequence)

HSP 1 Score: 30.0314 bits (66), Expect = 3.318e+0
Identity = 16/45 (35.56%), Postives = 25/45 (55.56%), Query Frame = 0

Query:   13 SFCLFHQCFGILSNTTCEDTDEPYCHSSIGSSKESCFDAAFQYTC 57
            SFC     F +  N+TC+D DE  C + +G+  + C + A  +TC
Sbjct: 1535 SFCDCRPGFWLAGNSTCKDIDE--CQAIVGACSQICENTAGSFTC 1663

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BLAST of EMLSAG00000012209 vs. C. finmarchicus
Match: gi|592800477|gb|GAXK01154091.1| (TSA: Calanus finmarchicus comp1386071_c0_seq1 transcribed RNA sequence)

HSP 1 Score: 29.261 bits (64), Expect = 5.648e+0
Identity = 13/29 (44.83%), Postives = 17/29 (58.62%), Query Frame = 0

Query:  114 CEEYQARETCDDELRSTKMKEMCKKTCNV 142
            C++Y A   C D+     MKE C KTCN+
Sbjct:  963 CKDYAAEGLCTDDFMEEDMKENCPKTCNL 1049

[Close]

BLAST of EMLSAG00000012209 vs. C. finmarchicus
Match: gi|592800476|gb|GAXK01154092.1| (TSA: Calanus finmarchicus comp1386071_c0_seq2 transcribed RNA sequence)

HSP 1 Score: 29.261 bits (64), Expect = 5.848e+0
Identity = 13/29 (44.83%), Postives = 17/29 (58.62%), Query Frame = 0

Query:  114 CEEYQARETCDDELRSTKMKEMCKKTCNV 142
            C++Y A   C D+     MKE C KTCN+
Sbjct:  963 CKDYAAEGLCTDDFMEEDMKENCPKTCNL 1049

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BLAST of EMLSAG00000012209 vs. C. finmarchicus
Match: gi|592899475|gb|GAXK01058900.1| (TSA: Calanus finmarchicus comp127632_c2_seq1 transcribed RNA sequence)

HSP 1 Score: 28.8758 bits (63), Expect = 7.171e+0
Identity = 31/106 (29.25%), Postives = 43/106 (40.57%), Query Frame = 0

Query:   43 SSKESCFDAAFQYTCPKSCGICDEC---EDLISIEFCESIKNRC-----NTDASVRYSCRKTCDLCKSNCNNAYYDDTVCEEYQARETCDDELRSTKMKEMCKKTC 140
             S+ S F   F   CP +C  C EC   ++    + C   K  C     NT   V+  C  TC+ C S C +    ++ CE ++    CD       M   C KTC
Sbjct: 1596 GSRWSLFMEVF---CPVTCSACKECTCEDNPAYDDRCPGWKRHCSSSNKNTRQFVQQRCPSTCNQC-SCCADRLDKNSYCESWKESGYCDAGPYVAWMFNNCYKTC 1901

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BLAST of EMLSAG00000012209 vs. C. finmarchicus
Match: gi|592899473|gb|GAXK01058902.1| (TSA: Calanus finmarchicus comp127632_c2_seq3 transcribed RNA sequence)

HSP 1 Score: 28.4906 bits (62), Expect = 9.208e+0
Identity = 31/106 (29.25%), Postives = 43/106 (40.57%), Query Frame = 0

Query:   43 SSKESCFDAAFQYTCPKSCGICDEC---EDLISIEFCESIKNRC-----NTDASVRYSCRKTCDLCKSNCNNAYYDDTVCEEYQARETCDDELRSTKMKEMCKKTC 140
             S+ S F   F   CP +C  C EC   ++    + C   K  C     NT   V+  C  TC+ C S C +    ++ CE ++    CD       M   C KTC
Sbjct:   90 GSRWSLFMEVF---CPVTCSACKECTCEDNPAYDDRCPGWKRHCSSSNKNTRQFVQQRCPSTCNQC-SCCADRLDKNSYCESWKESGYCDAGPYVAWMFNNCYKTC 395

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BLAST of EMLSAG00000012209 vs. L. salmonis peptides
Match: EMLSAP00000012209 (pep:novel supercontig:LSalAtl2s:LSalAtl2s8853:989:1792:-1 gene:EMLSAG00000012209 transcript:EMLSAT00000012209 description:"maker-LSalAtl2s8853-snap-gene-0.3")

HSP 1 Score: 290.812 bits (743), Expect = 9.712e-102
Identity = 144/144 (100.00%), Postives = 144/144 (100.00%), Query Frame = 0

Query:    1 METNRVLILHLLSFCLFHQCFGILSNTTCEDTDEPYCHSSIGSSKESCFDAAFQYTCPKSCGICDECEDLISIEFCESIKNRCNTDASVRYSCRKTCDLCKSNCNNAYYDDTVCEEYQARETCDDELRSTKMKEMCKKTCNVRK 144
            METNRVLILHLLSFCLFHQCFGILSNTTCEDTDEPYCHSSIGSSKESCFDAAFQYTCPKSCGICDECEDLISIEFCESIKNRCNTDASVRYSCRKTCDLCKSNCNNAYYDDTVCEEYQARETCDDELRSTKMKEMCKKTCNVRK
Sbjct:    1 METNRVLILHLLSFCLFHQCFGILSNTTCEDTDEPYCHSSIGSSKESCFDAAFQYTCPKSCGICDECEDLISIEFCESIKNRCNTDASVRYSCRKTCDLCKSNCNNAYYDDTVCEEYQARETCDDELRSTKMKEMCKKTCNVRK 144

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BLAST of EMLSAG00000012209 vs. L. salmonis peptides
Match: EMLSAP00000006643 (pep:novel supercontig:LSalAtl2s:LSalAtl2s3671:6789:7712:-1 gene:EMLSAG00000006643 transcript:EMLSAT00000006643 description:"maker-LSalAtl2s3671-snap-gene-0.3")

HSP 1 Score: 217.624 bits (553), Expect = 5.572e-72
Identity = 115/156 (73.72%), Postives = 118/156 (75.64%), Query Frame = 0

Query:    1 METNRVLILHLLSFCLFHQCFGILSNTTCEDTDEPYCHSSIGSSKESCFDAAFQYTCPKSCGI-----------------------------------CDECEDLISIEFCESIKNRCNTDASVRYSCRKTCDLCKSNCNNAYYDDTVCEEYQARE 121
            METNRVLILHLLSFCLFHQCFGILSNTTCEDTDE YCHSSIGSSKESCFDAAFQYTCPKSCGI                                   CDECEDLISIEFCESIKNRC+TDASV+YSCRK C LCKSNCNNAYYDDTVCEEYQAR+
Sbjct:   50 METNRVLILHLLSFCLFHQCFGILSNTTCEDTDETYCHSSIGSSKESCFDAAFQYTCPKSCGICDAKCRDNNGACYRDSIEECFEPQIANECPKSCAGCDECEDLISIEFCESIKNRCSTDASVQYSCRKXCHLCKSNCNNAYYDDTVCEEYQARD 205

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BLAST of EMLSAG00000012209 vs. L. salmonis peptides
Match: EMLSAP00000003375 (pep:novel supercontig:LSalAtl2s:LSalAtl2s1851:16797:17679:1 gene:EMLSAG00000003375 transcript:EMLSAT00000003375 description:"maker-LSalAtl2s1851-augustus-gene-0.4")

HSP 1 Score: 205.297 bits (521), Expect = 4.588e-68
Identity = 111/143 (77.62%), Postives = 120/143 (83.92%), Query Frame = 0

Query:    1 METNRVLILHLLSFCLFHQCFGILSNTTCEDTDEPYCHSSIGSSKESCFDAAFQYTCPKSCGICD-ECEDLISIEFCESIKNRCNTDASVRYSCRKTCDLC-KSNCNNAYYDDTVCEEYQARETCDDELRSTKMKEMCKKTCN 141
            METNRVLILHLLSFCLFHQCFGILSNTTCEDTDE YCHSSIGSSKESCFDAAFQYTCPKSCGICD +C D     + +SI+     +  +   C K+C  C +SNCNNAYYDDTVCEEYQAR+TCDDELRSTKMKEMCKKTCN
Sbjct:    1 METNRVLILHLLSFCLFHQCFGILSNTTCEDTDETYCHSSIGSSKESCFDAAFQYTCPKSCGICDAKCRDSNGACYRDSIEE--CFEPQIANECPKSCAGCDESNCNNAYYDDTVCEEYQARDTCDDELRSTKMKEMCKKTCN 141

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BLAST of EMLSAG00000012209 vs. L. salmonis peptides
Match: EMLSAP00000005292 (pep:novel supercontig:LSalAtl2s:LSalAtl2s282:38031:38884:1 gene:EMLSAG00000005292 transcript:EMLSAT00000005292 description:"maker-LSalAtl2s282-augustus-gene-0.13")

HSP 1 Score: 157.147 bits (396), Expect = 2.596e-49
Identity = 88/137 (64.23%), Postives = 98/137 (71.53%), Query Frame = 0

Query:    1 METNRVLILHLLSFCLFHQCFGILSNTTCEDTDEPYCHSSIGSSKESCFDAAFQYTCPKSCGICD-ECEDLISIEFCESIKNRCNTDASVRYSCRKTCDLC-KSNCNNAYYDDTVCEEYQARETCDDELRSTKMKEM 135
            METNRVLILH LSFCLF  CFGILSNTTCEDTDE YC SSIGS KESCF+AAFQYTCPKSCG CD +C D     + + + + C     +   C K+C  C  SNCNN +Y D VCEEY+ R   DD LRSTKMKEM
Sbjct:    1 METNRVLILHFLSFCLFQTCFGILSNTTCEDTDETYCQSSIGSDKESCFNAAFQYTCPKSCGACDAKCRDNNGACYRDGV-DECFL-PHIAKECPKSCAECDDSNCNNPFYKDAVCEEYKVRSNYDDVLRSTKMKEM 135

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BLAST of EMLSAG00000012209 vs. L. salmonis peptides
Match: EMLSAP00000003839 (pep:novel supercontig:LSalAtl2s:LSalAtl2s2089:76:636:1 gene:EMLSAG00000003839 transcript:EMLSAT00000003839 description:"augustus_masked-LSalAtl2s2089-processed-gene-0.0")

HSP 1 Score: 140.584 bits (353), Expect = 4.304e-43
Identity = 70/96 (72.92%), Postives = 77/96 (80.21%), Query Frame = 0

Query:   46 ESCFDAAFQYTCPKSCGICDECEDLISIEFCESIKNRCNTDASVRYSCRKTCDLCKSNCNNAYYDDTVCEEYQARETCDDELRSTKMKEMCKKTCN 141
            E CF       CPK+C  CDECEDLISIEFCE  +NRCNTD  +RYSCRKTC LCKS+CNNAYYDD VCEEY+AR TC+D  RSTKMKEMCKKTC+
Sbjct:   20 EECFLPHIAKDCPKTCAGCDECEDLISIEFCELYQNRCNTDTPIRYSCRKTCGLCKSDCNNAYYDDAVCEEYKARNTCEDVFRSTKMKEMCKKTCS 115

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BLAST of EMLSAG00000012209 vs. L. salmonis peptides
Match: EMLSAP00000005975 (pep:novel supercontig:LSalAtl2s:LSalAtl2s322:19068:19805:-1 gene:EMLSAG00000005975 transcript:EMLSAT00000005975 description:"maker-LSalAtl2s322-augustus-gene-0.10")

HSP 1 Score: 84.3445 bits (207), Expect = 6.198e-21
Identity = 40/91 (43.96%), Postives = 57/91 (62.64%), Query Frame = 0

Query:   44 SKESCFDAAFQYTCPKSCGICDECEDLISIEFCESIKNRCNTDASVRYSCRKTCDLCKSNCNNAYYDDTVCEEYQARETCDDELRSTKMKE 134
            S   C  +  Q  CPKSC  CDECED+IS   CE  + RC TD SV Y+CR+TC LC  +CN+A+  +++C  +++R  C+D +    MK+
Sbjct:   75 SSSLCLQSHMQKHCPKSCASCDECEDIISPRLCEQYRGRCKTDISVIYACRETCGLCDDDCNDAFVQESMCTIFESRGYCNDPININFMKK 165

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BLAST of EMLSAG00000012209 vs. L. salmonis peptides
Match: EMLSAP00000005974 (pep:novel supercontig:LSalAtl2s:LSalAtl2s322:1175:2268:1 gene:EMLSAG00000005974 transcript:EMLSAT00000005974 description:"maker-LSalAtl2s322-augustus-gene-0.11")

HSP 1 Score: 80.4925 bits (197), Expect = 1.027e-19
Identity = 39/96 (40.62%), Postives = 58/96 (60.42%), Query Frame = 0

Query:   46 ESCFDAAFQYTCPKSCGICDECEDLISIEFCESIKNRCNTDASVRYSCRKTCDLCKSNCNNAYYDDTVCEEYQARETCDDELRSTKMKEMCKKTCN 141
            ESC   + +  CPKSC  CD+CEDLI+ + C   K+RC  D SV+Y+CRKTC LC  +CN+A   +++C +++    C+       M   C++TC 
Sbjct:   35 ESCLQKSIEKQCPKSCASCDDCEDLINSDLCSGYKHRCGEDTSVQYACRKTCGLCDDSCNDASVHESLCYKFENNGYCEKSNTMDFMNRACRRTCG 130

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BLAST of EMLSAG00000012209 vs. L. salmonis peptides
Match: EMLSAP00000002186 (pep:novel supercontig:LSalAtl2s:LSalAtl2s1400:29785:30148:-1 gene:EMLSAG00000002186 transcript:EMLSAT00000002186 description:"maker-LSalAtl2s1400-augustus-gene-0.1")

HSP 1 Score: 63.5438 bits (153), Expect = 5.144e-14
Identity = 29/55 (52.73%), Postives = 38/55 (69.09%), Query Frame = 0

Query:   46 ESCFDAAFQYTCPKSCGICDECEDLISIEFCESIKNRCNTDASVRYSCRKTCDLC 100
            ESC   + +  CPKSC  CD+CEDLI+ + C    +RC  D SV+Y+CRKTC+LC
Sbjct:   25 ESCLQKSIEKQCPKSCASCDDCEDLINSDLCSGYTHRCEEDTSVQYACRKTCELC 79

[Close]

BLAST of EMLSAG00000012209 vs. L. salmonis peptides
Match: EMLSAP00000010899 (pep:novel supercontig:LSalAtl2s:LSalAtl2s726:81215:81971:1 gene:EMLSAG00000010899 transcript:EMLSAT00000010899 description:"maker-LSalAtl2s726-augustus-gene-0.5")

HSP 1 Score: 60.077 bits (144), Expect = 2.487e-12
Identity = 52/163 (31.90%), Postives = 73/163 (44.79%), Query Frame = 0

Query:   11 LLSFCLFHQCFGILSNTTCEDTDEPYCHSS-----IGSSKESC--------------------------FDAAFQYTCPKSCGICDECEDLISIEFCESIKNRCNTDASVRYSCRKTCDLCKSNCNNAYYDDTVCEEYQARETCDDELRSTKMKEMCKKTCNV 142
            +L  C F    G +S T C D  E  C S      I S + SC                          ++  F   CPK+C  CD CEDLI    C    + C T+A +RY+CRKTC  C  +CN+   +D  C   +   +C++   +  +K+MCKKTCN+
Sbjct:    7 VLMACFFQGINGKISATECVDDSEQSCKSQESRCFIPSVQFSCPQTCGVCNARCKDYKGDCSVEEMQCGYNLTFPIECPKTCAKCDVCEDLIDTAICMESLDDC-TNAYMRYACRKTCLYCIDSCNDVGSED-FCNIQKLSGSCEN---NEVVKKMCKKTCNI 164

[Close]

BLAST of EMLSAG00000012209 vs. L. salmonis peptides
Match: EMLSAP00000007109 (pep:novel supercontig:LSalAtl2s:LSalAtl2s400:180525:182688:-1 gene:EMLSAG00000007109 transcript:EMLSAT00000007109 description:"maker-LSalAtl2s400-augustus-gene-1.7")

HSP 1 Score: 59.6918 bits (143), Expect = 4.451e-12
Identity = 37/105 (35.24%), Postives = 56/105 (53.33%), Query Frame = 0

Query:   40 SIG--SSKESCFDAAFQYTCPKSCGICDECEDLISIEFCESIKNRCNTDASVRYSCRKTCDLCKSNCNNAYYDDTVCEEYQARETCD-DELRSTKMKEMCKKTCN 141
            SIG       C +   +  C ++CG CD CEDL++   C  +KN C+ + +VRY C  TC LC+  C +    D VC  ++    CD + + +  M+  C+KTCN
Sbjct:   85 SIGCIQFPNRCLNQNQRVDCQRACGNCDRCEDLLNNLMCNELKNLCH-NGNVRYFCPATCRLCEKACRDNLPYDIVCRSFRKSGFCDSNSIYNRFMQSACQKTCN 188

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BLAST of EMLSAG00000012209 vs. nr
Match: gi|225712722|gb|ACO12207.1| (ZK643.6 precursor [Lepeophtheirus salmonis])

HSP 1 Score: 68.1662 bits (165), Expect = 1.163e-11
Identity = 53/169 (31.36%), Postives = 82/169 (48.52%), Query Frame = 0

Query:    5 RVLILHLLSFCLFHQCFGILSNTTCEDTDEPYCHSSIGSSKE-----------------------SCFDAAFQ--------YTCPKSCGICDECEDLISIEFCESIKNRCNTDASVRYSCRKTCDLCKSNCNNAYYDDTVCEEYQARETCDDELRSTKMKEMCKKTCNV 142
            + L L L++ C F    G++SNT C D  +  C+S  G   +                       +CF+   Q         TCPK+C  CDECEDLI    CE+ K+ C  D +++Y CRK+C  C+  CN+   D+ +C+ + +R  C +   +  +K MCKK+C +
Sbjct:    2 KSLYLVLIA-CFFQGINGLISNTLCVDNSKSVCNSLQGQCNQPSILYTCPETCGVCKAICKDYNANCFNEDSQCTINKNLSNTCPKTCATCDECEDLIDSSICENKKSDCAED-NMKYVCRKSCKYCEDTCNDVASDE-LCKSHVSRGDCGN---NEAVKRMCKKSCEL 164

[Close]

BLAST of EMLSAG00000012209 vs. nr
Match: gi|290462093|gb|ADD24094.1| (protein ZK643.6 [Lepeophtheirus salmonis])

HSP 1 Score: 62.003 bits (149), Expect = 2.240e-9
Identity = 36/101 (35.64%), Postives = 56/101 (55.45%), Query Frame = 0

Query:   43 SSKESCFDAAFQYTCPKSCGICDECEDLISIEFCESIKNRCNTDASVRYSCRKTCDLCKSNCNNAYYDDTVCEEYQARETCDDE-LRSTKMKEMCKKTCNV 142
            ++   C D   +  C ++CG CD CEDL+    C  +KN CN + +VRY C  TC LC+ +C +    + VC  ++    CD + + +  MK  C+KTCN+
Sbjct:   66 NNPNKCLDRDQRLECQRACGNCDRCEDLLEHIMCNQLKNLCN-NGNVRYFCPATCRLCEKSCRDNLPYNRVCHNFKKSGFCDRKSIYNRFMKSACQKTCNL 165

The following BLAST results are available for this feature:

BLAST of EMLSAG00000012209 vs. GO
BLAST of EMLSAG00000012209 vs. C. finmarchicus
BLAST of EMLSAG00000012209 vs. L. salmonis peptides
BLAST of EMLSAG00000012209 vs. SwissProt
BLAST of EMLSAG00000012209 vs. Select Arthropod Genomes
BLAST of EMLSAG00000012209 vs. nr
BLAST of EMLSAG00000012209 vs. Tigriopus kingsejongenis genes

BLAST of EMLSAG00000012209 vs. GO
Analysis Date: 2014-04-02 (Blast vs. GO)
Total hits: 0


Match Name	E-value	Identity	Description

BLAST of EMLSAG00000012209 vs. C. finmarchicus
Analysis Date: 2014-05-09 (TblastN vs C. finmarchicus TSA)
Total hits: 9


Match Name	E-value	Identity	Description
gi\|592880591\|gb\|GAXK01077310.1\|	8.430e-2	31.18	TSA: Calanus finmarchicus comp4402501_c0_seq1 tran...	[more]
gi\|592947882\|gb\|GAXK01010671.1\|	2.713e-1	37.25	TSA: Calanus finmarchicus comp2643362_c0_seq1 tran...	[more]
gi\|592882706\|gb\|GAXK01075669.1\|	4.461e-1	28.57	TSA: Calanus finmarchicus comp6611765_c0_seq1 tran...	[more]
gi\|592817908\|gb\|GAXK01136660.1\|	1.574e+0	37.25	TSA: Calanus finmarchicus comp1320777_c0_seq1 tran...	[more]
gi\|592880424\|gb\|GAXK01077477.1\|	3.318e+0	35.56	TSA: Calanus finmarchicus comp427153_c0_seq1 trans...	[more]
gi\|592800477\|gb\|GAXK01154091.1\|	5.648e+0	44.83	TSA: Calanus finmarchicus comp1386071_c0_seq1 tran...	[more]
gi\|592800476\|gb\|GAXK01154092.1\|	5.848e+0	44.83	TSA: Calanus finmarchicus comp1386071_c0_seq2 tran...	[more]
gi\|592899475\|gb\|GAXK01058900.1\|	7.171e+0	29.25	TSA: Calanus finmarchicus comp127632_c2_seq1 trans...	[more]
gi\|592899473\|gb\|GAXK01058902.1\|	9.208e+0	29.25	TSA: Calanus finmarchicus comp127632_c2_seq3 trans...	[more]

BLAST of EMLSAG00000012209 vs. L. salmonis peptides
Analysis Date: 2014-05-10 (Blastp vs. self)
Total hits: 21


Match Name	E-value	Identity	Description
EMLSAP00000012209	9.712e-102	100.00	pep:novel supercontig:LSalAtl2s:LSalAtl2s8853:989:...	[more]
EMLSAP00000006643	5.572e-72	73.72	pep:novel supercontig:LSalAtl2s:LSalAtl2s3671:6789...	[more]
EMLSAP00000003375	4.588e-68	77.62	pep:novel supercontig:LSalAtl2s:LSalAtl2s1851:1679...	[more]
EMLSAP00000005292	2.596e-49	64.23	pep:novel supercontig:LSalAtl2s:LSalAtl2s282:38031...	[more]
EMLSAP00000003839	4.304e-43	72.92	pep:novel supercontig:LSalAtl2s:LSalAtl2s2089:76:6...	[more]
EMLSAP00000005975	6.198e-21	43.96	pep:novel supercontig:LSalAtl2s:LSalAtl2s322:19068...	[more]
EMLSAP00000005974	1.027e-19	40.63	pep:novel supercontig:LSalAtl2s:LSalAtl2s322:1175:...	[more]
EMLSAP00000002186	5.144e-14	52.73	pep:novel supercontig:LSalAtl2s:LSalAtl2s1400:2978...	[more]
EMLSAP00000010899	2.487e-12	31.90	pep:novel supercontig:LSalAtl2s:LSalAtl2s726:81215...	[more]
EMLSAP00000007109	4.451e-12	35.24	pep:novel supercontig:LSalAtl2s:LSalAtl2s400:18052...	[more]

Pages

BLAST of EMLSAG00000012209 vs. SwissProt
Analysis Date: 2017-02-10 (Blastp vs. SwissProt)
Total hits: 0


Match Name	E-value	Identity	Description

BLAST of EMLSAG00000012209 vs. Select Arthropod Genomes
Analysis Date: 2017-02-20 (Blastp vs. Selected Arthropods)
Total hits: 0


Match Name	E-value	Identity	Description

BLAST of EMLSAG00000012209 vs. nr
Analysis Date: 2017-02-20 (Blastp vs. NR (2/2017))
Total hits: 2


Match Name	E-value	Identity	Description
gi\|225712722\|gb\|ACO12207.1\|	1.163e-11	31.36	ZK643.6 precursor [Lepeophtheirus salmonis]	[more]
gi\|290462093\|gb\|ADD24094.1\|	2.240e-9	35.64	protein ZK643.6 [Lepeophtheirus salmonis]	[more]

BLAST of EMLSAG00000012209 vs. Tigriopus kingsejongenis genes
Analysis Date: 2018-04-18 (Blastp vs. Tigriopus kingsejongensis proteins)
Total hits: 0


Match Name	E-value	Identity	Description

Alignments

The following features are aligned


Aligned Feature	Feature Type	Alignment Location
LSalAtl2s8853	supercontig	LSalAtl2s8853:989..1792 -

Analyses

This gene is derived from or has results from the following analyses


Analysis Name	Date Performed
ensembl	2013-09-26 .965016
Blast vs. GO	2014-04-02
TblastN vs C. finmarchicus TSA	2014-05-09
Blastp vs. self	2014-05-10
Blastp vs. SwissProt	2017-02-10
Blastp vs. Selected Arthropods	2017-02-20
Blastp vs. NR (2/2017)	2017-02-20
Blastp vs. Tigriopus kingsejongensis proteins	2018-04-18

Properties


Property Name	Value
Logic name	ensemblgenomes
Description	maker-LSalAtl2s8853-snap-gene-0.3
Biotype	protein_coding
Evidence	IEA
Note	ZK643.6 precursor [Lepeophtheirus salmonis]

Cross References

External references for this gene


Database	Accession
Ensembl Metazoa (gene)	EMLSAG00000012209 (primary cross-reference)

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Species	Type
EMLSAT00000012209	EMLSAT00000012209-708056	Lepeophtheirus salmonis	mRNA

Sequences

The following sequences are available for this feature:

gene from alignment at LSalAtl2s8853:989..1792-

gene from alignment at LSalAtl2s8853:989..1792-

Legend: mRNA

Hold the cursor over a type above to highlight its positions in the sequence below.

>EMLSAG00000012209-694975 ID=EMLSAG00000012209-694975|Name=EMLSAG00000012209|organism=Lepeophtheirus salmonis|type=gene|length=804bp|location=Sequence derived from alignment at LSalAtl2s8853:989..1792- (Lepeophtheirus salmonis)
AGCCATGGAAACAAACCGAGTACTGATCCTACATTTATTGAGCTTCTGTT
TATTTCATCAATGTTTTGGAATTTTGTCGAGTAATTAGAAGAACTTTTGT
ACATCTTGGAGTTTACAATCTAATATTCTTTTATCTTTTAGACACTACCT
GTGAAGATACCGATGAACCCTACTGTCATTCATCAATAGGTTCTAGCAAA
GAATCTTGCTTCGACGCTGCGTTTCAGTACACTTGCCCTAAATCTTGTGG
TATTTGTGATGGTAAAATATAAAATACATATTCATCTATAGCTGCATTCT
TATGATTAATATCATGTATCCTTCCRTTCACTTAGCTAAATGTAGAGATA
ATAACGGTGCTTGCTATAGAGATTCTATAGAGGAATGCTTTGARCCTCAA
ATTGCAAATGAATGTCCGAAATCGTGTGNCTGAAATCGTGTGCCGGATGT
GATGGTTAGTATCAAAGTTGTTTGTTGTATATCCATTCACTAATTAAATT
ATTTTATAAATAGAATGCGAGGACCTGATTTCTATTGAATTTTGTGAATC
GATTAAAAATCGATGCAACACGGATGCTTCAGTTCGATATTCTTGTAGAA
AAACCTGCGACTTATGCAGTAAGATTATTACTTATTATTATCTTACCATA
TAACTTATGCATTTGAATTATAGAGAGTAATTGTAATAATGCATATTATG
ATGACACCGTTTGTGAAGAATACCAAGCTAGAGAAACCTGTGATGATGAA
CTTCGTTCAACAAAAATGAAAGAAATGTGCAAGAAAACGTGTAATGTTCG
TAAA

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