EMLSAG00000001837, EMLSAG00000001837-684603 (gene) Lepeophtheirus salmonis

Overview
NameEMLSAG00000001837
Unique NameEMLSAG00000001837-684603
Typegene
OrganismLepeophtheirus salmonis (salmon louse)
Associated RNAi Experiments

Nothing found

Homology
BLAST of EMLSAG00000001837 vs. C. finmarchicus
Match: gi|592953585|gb|GAXK01004968.1| (TSA: Calanus finmarchicus comp348412_c0_seq1 transcribed RNA sequence)

HSP 1 Score: 75.0998 bits (183), Expect = 7.199e-17
Identity = 42/111 (37.84%), Postives = 60/111 (54.05%), Query Frame = 0
Query:    1 MYLGVTFILLSAVLVGFSHSQDXQQXXXXXXXXGGE--DCNCQCMSLKFRDSRGTTYGNCESTIN-GAQWCYVKYDRFSPCPDLQSSRRFNGRYWSNHACATPAENSPECR 108
            ++L ++F  L A+ + F  + +  +             +C CQC SL FRD  G  +GNC+S  + GAQWCY+    +S C DLQ S +F    WS  ACATP  +S EC+
Sbjct:   35 VFLKISFFSL-AIGINFDPAGEDARNATLLTRAASTYVNCGCQCSSLTFRDEYGKVHGNCKSVDDKGAQWCYISSTHYSSCEDLQLSAKFPNNPWSYTACATPDLSSYECQ 364          
BLAST of EMLSAG00000001837 vs. C. finmarchicus
Match: gi|592932365|gb|GAXK01026188.1| (TSA: Calanus finmarchicus comp18158_c2_seq13 transcribed RNA sequence)

HSP 1 Score: 67.0106 bits (162), Expect = 8.407e-14
Identity = 36/67 (53.73%), Postives = 45/67 (67.16%), Query Frame = 0
Query:   37 DCNCQCMSLKFRDSRGTTYGNCESTIN-GAQWCYVKYDRFSPCPDLQ-SSRRFNGRYWSNHACATPA 101
            +C CQC +L FRD  G T+GNC+S+ + GA WCYV   + S C DL  +S RF G+ WS  ACATPA
Sbjct:    4 NCGCQCSNLTFRDKYGKTHGNCKSSDHTGAVWCYVSPAQTSSCQDLSYTSTRFPGKPWSYEACATPA 204          
BLAST of EMLSAG00000001837 vs. C. finmarchicus
Match: gi|592932379|gb|GAXK01026174.1| (TSA: Calanus finmarchicus comp18158_c1_seq4 transcribed RNA sequence)

HSP 1 Score: 67.3958 bits (163), Expect = 9.233e-14
Identity = 37/72 (51.39%), Postives = 41/72 (56.94%), Query Frame = 0
Query:   37 DCNCQCMSLKFRDSRGTTYGNCESTI-NGAQWCYVKYDRFSPCPDLQSSRRFNGRYWSNHACATPAENSPEC 107
            +C CQC SL FRD+ GT  GNC++    GAQWCYV     S C DL  S RF    WS  ACATP   S  C
Sbjct:  130 NCGCQCSSLTFRDTSGTVQGNCKTVDGTGAQWCYVDSSSSS-CQDLVPSERFPHNPWSYEACATPDLGSALC 342          
BLAST of EMLSAG00000001837 vs. C. finmarchicus
Match: gi|592932366|gb|GAXK01026187.1| (TSA: Calanus finmarchicus comp18158_c2_seq12 transcribed RNA sequence)

HSP 1 Score: 67.0106 bits (162), Expect = 1.023e-13
Identity = 36/67 (53.73%), Postives = 45/67 (67.16%), Query Frame = 0
Query:   37 DCNCQCMSLKFRDSRGTTYGNCESTIN-GAQWCYVKYDRFSPCPDLQ-SSRRFNGRYWSNHACATPA 101
            +C CQC +L FRD  G T+GNC+S+ + GA WCYV   + S C DL  +S RF G+ WS  ACATPA
Sbjct:    4 NCGCQCSNLTFRDKYGKTHGNCKSSDHTGAVWCYVSPAQTSSCQDLSYTSTRFPGKPWSYEACATPA 204          
BLAST of EMLSAG00000001837 vs. C. finmarchicus
Match: gi|592932370|gb|GAXK01026183.1| (TSA: Calanus finmarchicus comp18158_c2_seq8 transcribed RNA sequence)

HSP 1 Score: 67.0106 bits (162), Expect = 3.598e-13
Identity = 36/67 (53.73%), Postives = 45/67 (67.16%), Query Frame = 0
Query:   37 DCNCQCMSLKFRDSRGTTYGNCESTIN-GAQWCYVKYDRFSPCPDLQ-SSRRFNGRYWSNHACATPA 101
            +C CQC +L FRD  G T+GNC+S+ + GA WCYV   + S C DL  +S RF G+ WS  ACATPA
Sbjct:    4 NCGCQCSNLTFRDKYGKTHGNCKSSDHTGAVWCYVSPAQTSSCQDLSYTSTRFPGKPWSYEACATPA 204          
BLAST of EMLSAG00000001837 vs. C. finmarchicus
Match: gi|592932375|gb|GAXK01026178.1| (TSA: Calanus finmarchicus comp18158_c2_seq3 transcribed RNA sequence)

HSP 1 Score: 67.3958 bits (163), Expect = 4.075e-13
Identity = 36/67 (53.73%), Postives = 45/67 (67.16%), Query Frame = 0
Query:   37 DCNCQCMSLKFRDSRGTTYGNCESTIN-GAQWCYVKYDRFSPCPDLQ-SSRRFNGRYWSNHACATPA 101
            +C CQC +L FRD  G T+GNC+S+ + GA WCYV   + S C DL  +S RF G+ WS  ACATPA
Sbjct:    4 NCGCQCSNLTFRDKYGKTHGNCKSSDHTGAVWCYVSPAQTSSCQDLSYTSTRFPGKPWSYEACATPA 204          
BLAST of EMLSAG00000001837 vs. C. finmarchicus
Match: gi|592932373|gb|GAXK01026180.1| (TSA: Calanus finmarchicus comp18158_c2_seq5 transcribed RNA sequence)

HSP 1 Score: 67.0106 bits (162), Expect = 4.301e-13
Identity = 36/67 (53.73%), Postives = 45/67 (67.16%), Query Frame = 0
Query:   37 DCNCQCMSLKFRDSRGTTYGNCESTIN-GAQWCYVKYDRFSPCPDLQ-SSRRFNGRYWSNHACATPA 101
            +C CQC +L FRD  G T+GNC+S+ + GA WCYV   + S C DL  +S RF G+ WS  ACATPA
Sbjct:    4 NCGCQCSNLTFRDKYGKTHGNCKSSDHTGAVWCYVSPAQTSSCQDLSYTSTRFPGKPWSYEACATPA 204          
BLAST of EMLSAG00000001837 vs. C. finmarchicus
Match: gi|592932371|gb|GAXK01026182.1| (TSA: Calanus finmarchicus comp18158_c2_seq7 transcribed RNA sequence)

HSP 1 Score: 67.0106 bits (162), Expect = 4.385e-13
Identity = 36/67 (53.73%), Postives = 45/67 (67.16%), Query Frame = 0
Query:   37 DCNCQCMSLKFRDSRGTTYGNCESTIN-GAQWCYVKYDRFSPCPDLQ-SSRRFNGRYWSNHACATPA 101
            +C CQC +L FRD  G T+GNC+S+ + GA WCYV   + S C DL  +S RF G+ WS  ACATPA
Sbjct:    4 NCGCQCSNLTFRDKYGKTHGNCKSSDHTGAVWCYVSPAQTSSCQDLSYTSTRFPGKPWSYEACATPA 204          
BLAST of EMLSAG00000001837 vs. C. finmarchicus
Match: gi|592932374|gb|GAXK01026179.1| (TSA: Calanus finmarchicus comp18158_c2_seq4 transcribed RNA sequence)

HSP 1 Score: 67.0106 bits (162), Expect = 4.567e-13
Identity = 36/67 (53.73%), Postives = 45/67 (67.16%), Query Frame = 0
Query:   37 DCNCQCMSLKFRDSRGTTYGNCESTIN-GAQWCYVKYDRFSPCPDLQ-SSRRFNGRYWSNHACATPA 101
            +C CQC +L FRD  G T+GNC+S+ + GA WCYV   + S C DL  +S RF G+ WS  ACATPA
Sbjct:    4 NCGCQCSNLTFRDKYGKTHGNCKSSDHTGAVWCYVSPAQTSSCQDLSYTSTRFPGKPWSYEACATPA 204          
BLAST of EMLSAG00000001837 vs. C. finmarchicus
Match: gi|592932372|gb|GAXK01026181.1| (TSA: Calanus finmarchicus comp18158_c2_seq6 transcribed RNA sequence)

HSP 1 Score: 66.6254 bits (161), Expect = 6.219e-13
Identity = 36/67 (53.73%), Postives = 45/67 (67.16%), Query Frame = 0
Query:   37 DCNCQCMSLKFRDSRGTTYGNCESTIN-GAQWCYVKYDRFSPCPDLQ-SSRRFNGRYWSNHACATPA 101
            +C CQC +L FRD  G T+GNC+S+ + GA WCYV   + S C DL  +S RF G+ WS  ACATPA
Sbjct:    4 NCGCQCSNLTFRDKYGKTHGNCKSSDHTGAVWCYVSPAQTSSCQDLSYTSTRFPGKPWSYEACATPA 204          
BLAST of EMLSAG00000001837 vs. L. salmonis peptides
Match: EMLSAP00000001015 (pep:novel supercontig:LSalAtl2s:LSalAtl2s116:786764:792986:-1 gene:EMLSAG00000001015 transcript:EMLSAT00000001015 description:"maker-LSalAtl2s116-augustus-gene-8.13")

HSP 1 Score: 60.077 bits (144), Expect = 3.835e-12
Identity = 40/102 (39.22%), Postives = 54/102 (52.94%), Query Frame = 0
Query:    5 VTFILLSAVLVGFSHSQDXQ-QAPAAAPAPGGEDCNCQCMSLKFRDSRGTTYGNCEST-INGAQWCYVKYDRFSPCPDLQSSRRFNG----RYWSNHACATP 100
            ++ IL+ ++ V F  +QD   +AP+ A      +C CQC +  FRD  G T GNC S    GA+WCYV  +R   C D + S R +     R  S  ACATP
Sbjct:    2 ISKILILSIFVAFGSAQDITLKAPSLAV-----NCGCQCSNYIFRDGNGITQGNCNSADRTGAKWCYV--ERGHTCQDTRRSXRRDNFGRLRQISYEACATP 96          
BLAST of EMLSAG00000001837 vs. L. salmonis peptides
Match: EMLSAP00000007117 (pep:novel supercontig:LSalAtl2s:LSalAtl2s401:30551:49956:-1 gene:EMLSAG00000007117 transcript:EMLSAT00000007117 description:"maker-LSalAtl2s401-augustus-gene-0.12")

HSP 1 Score: 59.6918 bits (143), Expect = 6.189e-12
Identity = 42/99 (42.42%), Postives = 53/99 (53.54%), Query Frame = 0
Query:    8 ILLSAVLVGFSHSQDXQ-QAPAAAPAPGGEDCNCQCMSLKFRDSRGTTYGNCEST-INGAQWCYVKYDRFSPCPDLQSSRRFNG----RYWSNHACATP 100
            IL+ +V+V  + +QD   +AP+ A      +C CQC +  FRD RG T GNC S    GA+WCYV  DR   C D   S R +     R  S  ACATP
Sbjct:   60 ILIISVVVALTSAQDITLKAPSLAV-----NCGCQCSNYIFRDLRGITQGNCNSADQTGAKWCYV--DRGHTCQDTIGSARNDQFGRRRQISYEACATP 151          

HSP 2 Score: 45.4394 bits (106), Expect = 8.326e-7
Identity = 32/71 (45.07%), Postives = 37/71 (52.11%), Query Frame = 0
Query:   37 DCNCQCMSLKFRDSRGTTYGNCEST-INGAQWCYV------KYDRFSPCPDLQSSRRFNGRYWSNHACATP 100
            +C CQC    F+D RG T GNC S    GA+WCYV      +Y R S   + Q  RR   R  S  ACATP
Sbjct:  165 NCGCQCSIYIFQDVRGITQGNCNSADQTGAKWCYVNRGYTCQYTRGSG-RNYQFGRR---RQISYEACATP 231          
BLAST of EMLSAG00000001837 vs. L. salmonis peptides
Match: EMLSAP00000007122 (pep:novel supercontig:LSalAtl2s:LSalAtl2s401:64891:74089:-1 gene:EMLSAG00000007122 transcript:EMLSAT00000007122 description:"maker-LSalAtl2s401-augustus-gene-0.13")

HSP 1 Score: 58.9214 bits (141), Expect = 6.761e-12
Identity = 41/98 (41.84%), Postives = 53/98 (54.08%), Query Frame = 0
Query:    9 LLSAVLVGFSHSQDXQ-QAPAAAPAPGGEDCNCQCMSLKFRDSRGTTYGNCEST-INGAQWCYVKYDRFSPCPDLQSSRRFNG----RYWSNHACATP 100
            L+ +V+V  + +QD   +AP+ A      +C CQC +  FRD RG T GNC S    GA+WCYV  DR   C D + S R +     R  S  ACATP
Sbjct:  104 LIISVVVALTSAQDITLKAPSLAV-----NCGCQCSNYIFRDLRGITQGNCNSADRTGAKWCYV--DRGHTCQDTRGSGRKDQFGRRRQISYEACATP 194          

HSP 2 Score: 55.8398 bits (133), Expect = 8.537e-11
Identity = 35/81 (43.21%), Postives = 46/81 (56.79%), Query Frame = 0
Query:    8 ILLSAVLVGFSHSQDXQ-QAPAAAPAPGGEDCNCQCMSLKFRDSRGTTYGNCEST-INGAQWCYVKYDRFSPCPDLQSSRR 86
            IL+ +V+V  + +QD   +AP+ A      +C CQC +  FRD RG T GNC S    GA+WCYV  DR   C D + S R
Sbjct:    5 ILIISVVVALTSAQDITLKAPSLAV-----NCGCQCSNYIFRDLRGITQGNCNSADQTGAKWCYV--DRGHTCQDTRGSGR 78          
BLAST of EMLSAG00000001837 vs. L. salmonis peptides
Match: EMLSAP00000002890 (pep:novel supercontig:LSalAtl2s:LSalAtl2s166:445712:450389:1 gene:EMLSAG00000002890 transcript:EMLSAT00000002890 description:"maker-LSalAtl2s166-augustus-gene-4.9")

HSP 1 Score: 58.5362 bits (140), Expect = 7.036e-12
Identity = 35/97 (36.08%), Postives = 50/97 (51.55%), Query Frame = 0
Query:    5 VTFILLSAVLVGFSHSQDXQQAPAAAPAPGGEDCNCQCMSLKFRDSRGTTYGNC-ESTINGAQWCYVKYDRFSPCPDLQSSRRFNGRYWSNHACATP 100
            +   L+  ++  F    +  Q    +P+   ++C CQC S  F D +G T GNC  S   G +WCYV Y   + C D   S R+NG+ WS  AC+TP
Sbjct:    2 IKIQLIKTLVCMFLSMLNLTQGQLRSPSLY-QNCGCQCNSYTFSDIKGYTQGNCFSSDFTGGRWCYVDYG--NTCHDAVPSLRYNGQ-WSYEACSTP 94          
BLAST of EMLSAG00000001837 vs. L. salmonis peptides
Match: EMLSAP00000004889 (pep:novel supercontig:LSalAtl2s:LSalAtl2s257:179358:180381:1 gene:EMLSAG00000004889 transcript:EMLSAT00000004889 description:"maker-LSalAtl2s257-augustus-gene-1.12")

HSP 1 Score: 57.3806 bits (137), Expect = 1.048e-11
Identity = 32/66 (48.48%), Postives = 38/66 (57.58%), Query Frame = 0
Query:   36 EDCNCQCMSLKFRDSRGTTYGNCEST-INGAQWCYVKYDRFSPCPDLQSSRRFNGRYWSNHACATP 100
            ++C CQC SL F DS G   GNC S    GA+WCY+ +     C D Q S RF  + WS  ACATP
Sbjct:   20 QNCGCQCSSLTFADSYGRIQGNCRSADYTGARWCYIPFSH--TCNDAQYSSRFRNQ-WSYEACATP 82          
BLAST of EMLSAG00000001837 vs. L. salmonis peptides
Match: EMLSAP00000001011 (pep:novel supercontig:LSalAtl2s:LSalAtl2s116:644091:644652:-1 gene:EMLSAG00000001011 transcript:EMLSAT00000001011 description:"maker-LSalAtl2s116-augustus-gene-6.17")

HSP 1 Score: 55.8398 bits (133), Expect = 6.548e-11
Identity = 40/105 (38.10%), Postives = 55/105 (52.38%), Query Frame = 0
Query:    5 VTFILLSAVLVGFSHSQDXQ-QAPAAAPAPGGEDCNCQCMSLKFRDSRGTTYGNCEST-INGAQWCYVKYDRFSPCPDLQSSRRFN-----GRY--WSNHACATP 100
            ++ IL+ ++ V F  +QD   +AP+ A      +C CQC +  FRD  G T GNC S    GA++CYV+     P    Q +RR       GR+   SN ACATP
Sbjct:    2 ISKILILSIFVAFGSAQDITLKAPSLAV-----NCGCQCSNYIFRDGNGITQGNCNSADRTGAKFCYVE-----PGXTXQDTRRSGRRDXFGRFRQISNEACATP 96          
BLAST of EMLSAG00000001837 vs. L. salmonis peptides
Match: EMLSAP00000006141 (pep:novel supercontig:LSalAtl2s:LSalAtl2s335:388935:390297:1 gene:EMLSAG00000006141 transcript:EMLSAT00000006141 description:"maker-LSalAtl2s335-snap-gene-4.14")

HSP 1 Score: 52.7582 bits (125), Expect = 1.052e-9
Identity = 39/108 (36.11%), Postives = 52/108 (48.15%), Query Frame = 0
Query:    1 MYLGVTFILLSAVLVGFSHSQDXQQAPAAAPAPGGEDCNCQCMSLKFRDSRGTTYGNCEST-INGAQWCYVKYDRFSPCPDLQSSRRFNG----RYWSNHACATPAEN 103
            MYL +  ILL       +   D     A++      +C CQC +  F+D  G T GNC +   +GA+WCYV   R + C D+  S R +     R  SN ACATP  N
Sbjct:    1 MYLKLG-ILLVVCACAIAQKNDIILKAASSRT----NCGCQCNNYIFKDKYGRTQGNCNTADKSGAKWCYV--SRGNTCNDVTYSSRKDERGQPRRISNEACATPVCN 101          
BLAST of EMLSAG00000001837 vs. L. salmonis peptides
Match: EMLSAP00000005421 (pep:novel supercontig:LSalAtl2s:LSalAtl2s292:107272:109821:1 gene:EMLSAG00000005421 transcript:EMLSAT00000005421 description:"maker-LSalAtl2s292-snap-gene-1.3")

HSP 1 Score: 48.1358 bits (113), Expect = 1.787e-8
Identity = 21/48 (43.75%), Postives = 29/48 (60.42%), Query Frame = 0
Query:   61 TINGAQWCYVKYDRFSPCPDLQSSRRFNGRYWSNHACATPAENSPECR 108
            T    ++CYV  D  SPC DL+ S +F G+Y S HAC TP  ++  C+
Sbjct:   35 TFQEGKFCYVVGDSKSPCVDLKPSTQFMGKYISKHACLTPHLDTFLCK 82          
BLAST of EMLSAG00000001837 vs. L. salmonis peptides
Match: EMLSAP00000006139 (pep:novel supercontig:LSalAtl2s:LSalAtl2s335:347119:354560:1 gene:EMLSAG00000006139 transcript:EMLSAT00000006139 description:"snap_masked-LSalAtl2s335-processed-gene-4.8")

HSP 1 Score: 49.2914 bits (116), Expect = 3.888e-8
Identity = 31/72 (43.06%), Postives = 39/72 (54.17%), Query Frame = 0
Query:   37 DCNCQCMSLKFRDSRGTTYGNCEST-INGAQWCYVKYDRFSPCPDLQSSRRFNG----RYWSNHACATPAEN 103
            +C CQC +  F D  G T GNC +   +GA+WCYV   R + C D+  S R +     R  SN ACATP  N
Sbjct:   68 NCGCQCNNYIFLDKYGKTQGNCNTVDKSGAKWCYV--SRGNTCNDVTYSSRKDERGQPRRISNEACATPVCN 137          
BLAST of EMLSAG00000001837 vs. nr
Match: gi|155966304|gb|ABU41105.1| (hypothetical protein [Lepeophtheirus salmonis])

HSP 1 Score: 101.293 bits (251), Expect = 5.441e-25
Identity = 50/104 (48.08%), Postives = 65/104 (62.50%), Query Frame = 0
Query:    4 GVTFILLSAVLVGFSHSQDXQQAPAAAPAPGGEDCNCQCMSLKFRDSRGTTYGNCESTINGAQWCYVKYDRFSPCPDLQSSRRFNGRYWSNHACATPAENSPEC 107
            G+   ++ A  V +S++Q    AP  + A    DC CQC++L F D  G   GNC ST NGAQWCYV+ D +S CPDL+ S R+ G+Y+SNHAC T    SPEC
Sbjct:    3 GIYIGIVLATCVYWSNAQQFAPAPINSQA----DCQCQCIALSFYDEYGQQQGNCRSTFNGAQWCYVENDGYSSCPDLKRSTRYRGKYYSNHACITLPAYSPEC 102          
BLAST of EMLSAG00000001837 vs. nr
Match: gi|155966135|gb|ABU41022.1| (hypothetical protein [Lepeophtheirus salmonis])

HSP 1 Score: 57.7658 bits (138), Expect = 6.913e-8
Identity = 42/102 (41.18%), Postives = 58/102 (56.86%), Query Frame = 0
Query:    5 VTFILLSAVLVGFSHSQDXQ-QAPAAAPAPGGEDCNCQCMSLKFRDSRGTTYGNCEST-INGAQWCYVKYDRFSPCPDL-QSSRRFN-GRY--WSNHACATP 100
            ++ IL+ ++ V F  +QD   +AP+ A      +C CQC +  FRD  G T GNC S    GA++CYV+    + C D  +S RR N GR+   SN ACATP
Sbjct:    2 ISKILIVSIFVAFGSAQDITLKAPSLAV-----NCGCQCSNYIFRDGNGITQGNCNSADRTGAKFCYVEPG--NTCQDTRRSGRRDNFGRFRQISNEACATP 96          
BLAST of EMLSAG00000001837 vs. Tigriopus kingsejongenis genes
Match: maker-scaffold381_size190066-snap-gene-0.31 (protein:Tk01605 transcript:maker-scaffold381_size190066-snap-gene-0.31-mRNA-1 annotation:"hypothetical protein")

HSP 1 Score: 60.077 bits (144), Expect = 3.155e-12
Identity = 38/106 (35.85%), Postives = 51/106 (48.11%), Query Frame = 0
Query:    9 LLSAVLVGFSHSQDXQQAPAAAPAPGGE-DCNCQCMSLKFRDSRGTTYGNCEST-INGAQWCYVKYDRFSPCPDLQSSR-RFNG----RYWSNHACATPAENSPEC 107
            LL+ V    + +Q  +       AP    +C CQC    +RD+ G   GNC S     A WCY+    F+ C D++ SR R +     R WS  AC+TPA  SP C
Sbjct:   18 LLALVSSQITDTQVAESGDIVLKAPSNLINCGCQCDPYTWRDTLGRVQGNCRSADATKALWCYIPASAFTSCADIRQSRNRLDNFGRPRRWSYEACSTPALTSPIC 123          
BLAST of EMLSAG00000001837 vs. Tigriopus kingsejongenis genes
Match: maker-scaffold82_size396747-snap-gene-2.41 (protein:Tk06844 transcript:maker-scaffold82_size396747-snap-gene-2.41-mRNA-1 annotation:"hypothetical protein")

HSP 1 Score: 56.225 bits (134), Expect = 1.565e-10
Identity = 36/96 (37.50%), Postives = 46/96 (47.92%), Query Frame = 0
Query:    6 TFILLSAVLVGFSHSQDXQQAPAAAPAPGGED-CNCQCMSLKFRDSRGTTYGNCESTINGAQWCYVKYDRFSPCPDLQSSRRFNGRYWSNHACATP 100
            T   L  V+VG         + A A +   +D C+CQC +  F+    T +GNC     GA WCYVK    S C D   S R +G +WS  AC TP
Sbjct:  216 TLAFLGEVVVGRCAILVKNASLAKAQSEITQDVCDCQCNNYTFK-FDNTLHGNCLQPYKGALWCYVKDFGQSTCIDRLESSRVSGLFWSFQACGTP 310          
BLAST of EMLSAG00000001837 vs. Tigriopus kingsejongenis genes
Match: maker-scaffold381_size190066-snap-gene-0.30 (protein:Tk01607 transcript:maker-scaffold381_size190066-snap-gene-0.30-mRNA-1 annotation:"hypothetical protein AN3340.2")

HSP 1 Score: 53.9138 bits (128), Expect = 5.915e-10
Identity = 39/120 (32.50%), Postives = 56/120 (46.67%), Query Frame = 0
Query:    6 TFILLSAVLVGFSHSQ---------DXQQAPAAAPAPGGE-DCNCQCMSLKFRDSRGTTYGNC-ESTINGAQWCYVKYDRFS-PCPDLQSSRRF-----NGRYWSNHACATPAENSPECR 108
             F +LS VL   + +Q         D +       AP  +  CNCQC +  ++      +GNC  +    A+WCYV  D++S  C D+Q S+       N R WS  AC+TP   S +CR
Sbjct:    3 VFCILSTVLALTALTQAQDEAEDGVDTKSVEILQKAPSNQVSCNCQCDNYTYKGGDNQIHGNCFSADQTKAKWCYV--DQYSGECDDIQYSKNRRDSHGNLRKWSYQACSTPERASHQCR 120          
BLAST of EMLSAG00000001837 vs. Tigriopus kingsejongenis genes
Match: maker-scaffold381_size190066-snap-gene-0.32 (protein:Tk01608 transcript:maker-scaffold381_size190066-snap-gene-0.32-mRNA-1 annotation:"---NA---")

HSP 1 Score: 46.9802 bits (110), Expect = 1.727e-7
Identity = 27/77 (35.06%), Postives = 42/77 (54.55%), Query Frame = 0
Query:   38 CNCQCMSLKFRDSRGTTYGNCESTING-AQWCYVKYDRFS-PCPDLQSSRRF-----NGRYWSNHACATPAENSPEC 107
            CNCQC +  ++      +GNC +  +   +WCY+  D+++  C D+Q S+       N R WS  AC+TP   SP+C
Sbjct:   47 CNCQCDNYTYKGDDNQIHGNCFTADHTRGKWCYL--DQYNNDCDDIQYSKNRRDSFGNLREWSYQACSTPQLGSPQC 121          
The following BLAST results are available for this feature:
BLAST of EMLSAG00000001837 vs. GO
Analysis Date: 2014-04-02 (Blast vs. GO)
Total hits: 0
Match NameE-valueIdentityDescription
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BLAST of EMLSAG00000001837 vs. C. finmarchicus
Analysis Date: 2014-05-09 (TblastN vs C. finmarchicus TSA)
Total hits: 25
Match NameE-valueIdentityDescription
gi|592953585|gb|GAXK01004968.1|7.199e-1737.84TSA: Calanus finmarchicus comp348412_c0_seq1 trans... [more]
gi|592932365|gb|GAXK01026188.1|8.407e-1453.73TSA: Calanus finmarchicus comp18158_c2_seq13 trans... [more]
gi|592932379|gb|GAXK01026174.1|9.233e-1451.39TSA: Calanus finmarchicus comp18158_c1_seq4 transc... [more]
gi|592932366|gb|GAXK01026187.1|1.023e-1353.73TSA: Calanus finmarchicus comp18158_c2_seq12 trans... [more]
gi|592932370|gb|GAXK01026183.1|3.598e-1353.73TSA: Calanus finmarchicus comp18158_c2_seq8 transc... [more]
gi|592932375|gb|GAXK01026178.1|4.075e-1353.73TSA: Calanus finmarchicus comp18158_c2_seq3 transc... [more]
gi|592932373|gb|GAXK01026180.1|4.301e-1353.73TSA: Calanus finmarchicus comp18158_c2_seq5 transc... [more]
gi|592932371|gb|GAXK01026182.1|4.385e-1353.73TSA: Calanus finmarchicus comp18158_c2_seq7 transc... [more]
gi|592932374|gb|GAXK01026179.1|4.567e-1353.73TSA: Calanus finmarchicus comp18158_c2_seq4 transc... [more]
gi|592932372|gb|GAXK01026181.1|6.219e-1353.73TSA: Calanus finmarchicus comp18158_c2_seq6 transc... [more]

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BLAST of EMLSAG00000001837 vs. L. salmonis peptides
Analysis Date: 2014-05-10 (Blastp vs. self)
Total hits: 19
Match NameE-valueIdentityDescription
EMLSAP000000010153.835e-1239.22pep:novel supercontig:LSalAtl2s:LSalAtl2s116:78676... [more]
EMLSAP000000071176.189e-1242.42pep:novel supercontig:LSalAtl2s:LSalAtl2s401:30551... [more]
EMLSAP000000071226.761e-1241.84pep:novel supercontig:LSalAtl2s:LSalAtl2s401:64891... [more]
EMLSAP000000028907.036e-1236.08pep:novel supercontig:LSalAtl2s:LSalAtl2s166:44571... [more]
EMLSAP000000048891.048e-1148.48pep:novel supercontig:LSalAtl2s:LSalAtl2s257:17935... [more]
EMLSAP000000010116.548e-1138.10pep:novel supercontig:LSalAtl2s:LSalAtl2s116:64409... [more]
EMLSAP000000061411.052e-936.11pep:novel supercontig:LSalAtl2s:LSalAtl2s335:38893... [more]
EMLSAP000000054211.787e-843.75pep:novel supercontig:LSalAtl2s:LSalAtl2s292:10727... [more]
EMLSAP000000061393.888e-843.06pep:novel supercontig:LSalAtl2s:LSalAtl2s335:34711... [more]

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BLAST of EMLSAG00000001837 vs. SwissProt
Analysis Date: 2017-02-10 (Blastp vs. SwissProt)
Total hits: 0
Match NameE-valueIdentityDescription
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BLAST of EMLSAG00000001837 vs. Select Arthropod Genomes
Analysis Date: 2017-02-20 (Blastp vs. Selected Arthropods)
Total hits: 0
Match NameE-valueIdentityDescription
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BLAST of EMLSAG00000001837 vs. nr
Analysis Date: 2017-02-20 (Blastp vs. NR (2/2017))
Total hits: 2
Match NameE-valueIdentityDescription
gi|155966304|gb|ABU41105.1|5.441e-2548.08hypothetical protein [Lepeophtheirus salmonis][more]
gi|155966135|gb|ABU41022.1|6.913e-841.18hypothetical protein [Lepeophtheirus salmonis][more]
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BLAST of EMLSAG00000001837 vs. Tigriopus kingsejongenis genes
Analysis Date: 2018-04-18 (Blastp vs. Tigriopus kingsejongensis proteins)
Total hits: 4
Match NameE-valueIdentityDescription
maker-scaffold381_size190066-snap-gene-0.313.155e-1235.85protein:Tk01605 transcript:maker-scaffold381_size1... [more]
maker-scaffold82_size396747-snap-gene-2.411.565e-1037.50protein:Tk06844 transcript:maker-scaffold82_size39... [more]
maker-scaffold381_size190066-snap-gene-0.305.915e-1032.50protein:Tk01607 transcript:maker-scaffold381_size1... [more]
maker-scaffold381_size190066-snap-gene-0.321.727e-735.06protein:Tk01608 transcript:maker-scaffold381_size1... [more]
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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
LSalAtl2s1318supercontigLSalAtl2s1318:72145..72812 +
Analyses
This gene is derived from or has results from the following analyses
Analysis NameDate Performed
ensembl2013-09-26 .965016
Blast vs. GO2014-04-02
TblastN vs C. finmarchicus TSA2014-05-09
Blastp vs. self2014-05-10
Blastp vs. SwissProt2017-02-10
Blastp vs. Selected Arthropods2017-02-20
Blastp vs. NR (2/2017)2017-02-20
Blastp vs. Tigriopus kingsejongensis proteins2018-04-18
Properties
Property NameValue
Logic nameensemblgenomes
Descriptionmaker-LSalAtl2s1318-augustus-gene-0.12
Biotypeprotein_coding
EvidenceIEA
Notehypothetical protein [Lepeophtheirus salmonis]
Cross References
External references for this gene
DatabaseAccession
Ensembl Metazoa (gene)EMLSAG00000001837 (primary cross-reference)
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameSpeciesType
EMLSAT00000001837EMLSAT00000001837-697684Lepeophtheirus salmonismRNA


Sequences
The following sequences are available for this feature:

gene from alignment at LSalAtl2s1318:72145..72812+

Legend: mRNA
Hold the cursor over a type above to highlight its positions in the sequence below.
>EMLSAG00000001837-684603 ID=EMLSAG00000001837-684603|Name=EMLSAG00000001837|organism=Lepeophtheirus salmonis|type=gene|length=668bp|location=Sequence derived from alignment at LSalAtl2s1318:72145..72812+ (Lepeophtheirus salmonis)
AAATCAGTTCATTCCATTCTACTAGAAACTACTAATTAAAAATGTATCTT GGAGTCACATTTATTCTCTTGAGTGCAGTCCTTGTGGGATTTTCTCATTC ACAAGATGRCCAACAAGCKCCAGCAGCGGCTCCAGCCCCTGGAGGAGAAG ACTGTAATTGTCAATGTATGTCTTTAAAATTCCGAGATTCGAGAGGAACC ACATACGGAAACTGCGAGAGGTAAGTCAACGTATGGAAATATACCATCAT TTTACTTCCTACTTTGCAGCACGATCAATGGAGCTCAGTGGTGCTATGTT AAATATGATAGATTTAGCCCATGTCCTGATCTTCAATCATCCCGTCGTTT CAACGGACGCTATTGGTCTAATCATGCCTGTGCAACTCCAGCTGAGAATT CGCCTGAGTGCAGATTTTCTACTAGACCATCTGTTCCATTTGCWTCTTCR CCAGCCTCTTCCGTTGCAAACAGTGGTGTCGCCGATGATGTCTTTTAATC CTCTTTATCAGTTGTTTTCCTGTTTTAATGTAAAATATAGGATTAATTAA TGTTTTTTTTTGTTTTTTAAAGTATAATATATTTCTCCAAAAATAAAATA AAATGTTCTAAATTCAATTGCAGTTAAAAATGGTTAATCGATAATAAAAA CTATTTCATTTTAGTCCC
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