RNAi

Search or browse a total of 353 RNA interference (RNAi) experiments available in LiceBase. RNA interference is a technique to "silence" a gene's expression by injection of double-stranded RNA (dsRNA) or short-interfering RNA (siRNA).
At SLRC, dsRNA has been widely used and can be applied at Nauplia and pre-adult and adult stages of the salmon louse. The animals are then compared to control animals for differences in phenotype. Most are only inspected visually, but some also histologically or measurements, e.g. of egg-string length. Note: "No visible phenotype" means that no difference could be observed under the outlined experimental conditions and using the observation methods applied.

Select one or many phenotypes
List of all RNAi experiments
Gallery Image Title Primary target ID Developmental Stage CV Phenotype Number of Individuals (Start/End) Organism Efficacy of Knock Down Postedsort ascending
51 Nauplii I 3021-1 EMLSAG00000003021, EMLSAG00000003021-685787 (gene) Lepeophtheirus salmonis Nauplius I no visible phenotype Lepeophtheirus salmonis F>80.00% 14 June, 2018 - 13:38
52 Nauplii I 5242-1 EMLSAG00000005242, EMLSAG00000005242-688008 (gene) Lepeophtheirus salmonis Nauplius I no visible phenotype Lepeophtheirus salmonis F>80.00% 14 June, 2018 - 13:37
53 Nauplii I 7974-2 EMLSAG00000007974, EMLSAG00000007974-690740 (gene) Lepeophtheirus salmonis Nauplius I no visible phenotype Lepeophtheirus salmonis F>80.00% 14 June, 2018 - 13:35
54 LsCHS2 EMLSAT00000007308, EMLSAT00000007308-703155 (mRNA) Lepeophtheirus salmonis
LsCHS2
PreAdult2, Adult None 60/12 Lepeophtheirus salmonis 14 June, 2018 - 13:35
55 Nauplii I 7974-1 EMLSAG00000007974, EMLSAG00000007974-690740 (gene) Lepeophtheirus salmonis Nauplius I no visible phenotype Lepeophtheirus salmonis F>80.00% 14 June, 2018 - 13:34
56 RNAi_AN 10832+11366+11369+12062 EMLSAG00000010832, EMLSAG00000010832-693598 (gene) Lepeophtheirus salmonis, EMLSAG00000011366, EMLSAG00000011366-694132 (gene) Lepeophtheirus salmonis, EMLSAG00000011369, EMLSAG00000011369-694135 (gene) Lepeophtheirus salmonis, EMLSAG00000012062, EMLSAG00000012062-694828 (gene) Lepeophtheirus salmonis preadult I male, preadult I female developmental defect, feeding, female reproduction Lepeophtheirus salmonis F>90.00% 14 June, 2018 - 13:31
57 RNAi_AN 3895 EMLSAG00000003895, EMLSAG00000003895-686661 (gene) Lepeophtheirus salmonis preadult I male, preadult I female developmental defect Lepeophtheirus salmonis F>99.00% 14 June, 2018 - 13:27
58 EMLSAT00000004874_Var2Frag2 EMLSAT00000004874, EMLSAT00000004874-700721 (mRNA) Lepeophtheirus salmonis
Heme peroxidase
Nauplius1, Copepodid no visible phenotype 60 Lepeophtheirus salmonis F>61.00% 14 June, 2018 - 13:23
59 EMLSAT00000004874_Var2Frag1 EMLSAT00000004874, EMLSAT00000004874-700721 (mRNA) Lepeophtheirus salmonis
Heme peroxidase
Nauplius1, Copepodid no visible phenotype Lepeophtheirus salmonis F>77.00% 14 June, 2018 - 13:19
60 AL F339 EMLSAG00000008902, EMLSAG00000008902-691668 (gene) Lepeophtheirus salmonis, EMLSAG00000008900, EMLSAG00000008900-691666 (gene) Lepeophtheirus salmonis
FTZ-F1
PreAdult2, Adult No eggstrings
female reproduction, no eggstrings
30/7 Lepeophtheirus salmonis F>45.00% 14 June, 2018 - 13:14

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